View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7395_low_8 (Length: 295)
Name: NF7395_low_8
Description: NF7395
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7395_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 36804264 - 36804156
Alignment:
| Q |
16 |
cactgggaagagctgatgttttgtgaagactcatccggtctttgttggcctgatcttatattagcaaggcacataatgtaaacatgtataacatatcgtg |
115 |
Q |
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| T |
36804264 |
cactaggaagagctgatgttttgtgaagactcatccggtctttgttggcctgatcttatattagcaaggcacataatgtgaacatgtataacatatcgtg |
36804165 |
T |
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| Q |
116 |
tcatctccc |
124 |
Q |
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|| |||||| |
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| T |
36804164 |
tcgtctccc |
36804156 |
T |
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Target: chr8; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 189 - 268
Target Start/End: Complemental strand, 36797612 - 36797533
Alignment:
| Q |
189 |
cttgctctctattttaaaataaggtattcattgacacttaatggaaatattacaatctggaatgctataatcagatcaaa |
268 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36797612 |
cttgctctctattttaaaataaggtattcattgacacttaatggaaatattacaatctggaatgctataatcagatcaaa |
36797533 |
T |
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