View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7396_high_14 (Length: 273)
Name: NF7396_high_14
Description: NF7396
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7396_high_14 |
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Alignment Details
Target: chr4 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 13 - 242
Target Start/End: Complemental strand, 25796086 - 25795857
Alignment:
| Q |
13 |
aatattcctggttgacgaatgggacatttgactagtactgagtatccatcaaccaatgctaatgtgaaactccaaggtataaccaaacccatgattgtca |
112 |
Q |
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| T |
25796086 |
aatattcctggttgacgaatgggacatttgactagtactgagtatccatctaccaatgctaatgtgaaactccaaggtataaccaaacccatgattgtca |
25795987 |
T |
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| Q |
113 |
ccaaatagctagcacatgaataatgaacacacacaattagctacataattatagaaattcgacgaatttactaatgtgattgatctcaatctgctcatgc |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25795986 |
ccaaatagctagcacatgaataatgaacacacacaattagctacataattatagaaattcgacgaatttactaatgtgattgatctcaatctgctcatgc |
25795887 |
T |
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| Q |
213 |
ctcctttccttttatgttatgaatttacta |
242 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
25795886 |
ctcctttccttttatgttatgaatttacta |
25795857 |
T |
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