View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7396_high_15 (Length: 262)
Name: NF7396_high_15
Description: NF7396
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7396_high_15 |
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Alignment Details
Target: chr5 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 40562459 - 40562705
Alignment:
| Q |
1 |
tatgtcagcatgcaaggaagcccaatacggagtttgagtcatactcattctaagggtggtgggcttgagcttggtgtttaagtgggaacggtgttgattt |
100 |
Q |
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| T |
40562459 |
tatgtcagcatgcaaggaagcccaatacggagtttgagtcatactcattctaagggtggtggacttgagcttggtgtttaagtgggaacggtgttgattt |
40562558 |
T |
|
| Q |
101 |
gatatgcatgagaaatgaacggtggatttaacatttgtgacgtatgaagttgtagtaaccatattggnnnnnnnntgaggtgaaggtgtttgaagaagag |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |
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| T |
40562559 |
gatatgcatgagaaatgaacggtggatttaacatttgtgacgtatgaagttgtagtaaccatattggaaaaaaaatgaggtgaagg---ttgaagaagag |
40562655 |
T |
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| Q |
201 |
aaaggagggagaagaatgaaataagtctcaagttgagttattttgatatt |
250 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40562656 |
aaaggagggagaagaatgaaataagtctcaagttgagttattttgatatt |
40562705 |
T |
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