View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7396_low_23 (Length: 205)
Name: NF7396_low_23
Description: NF7396
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7396_low_23 |
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Alignment Details
Target: chr3 (Bit Score: 183; Significance: 3e-99; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 183; E-Value: 3e-99
Query Start/End: Original strand, 4 - 186
Target Start/End: Complemental strand, 49702029 - 49701847
Alignment:
| Q |
4 |
tgtatcttaggtcttcatcaaatgtaagaatagggaaatgtgagaagattctgtgaataaaacattatgtgaagctaaaacagtaaaacatgtccaggta |
103 |
Q |
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| T |
49702029 |
tgtatcttaggtcttcatcaaatgtaagaatagggaaatgtgagaagattctgtgaataaaacattatgtgaagctaaaacagtaaaacatgtccaggta |
49701930 |
T |
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| Q |
104 |
ttaaaatcatttttggaagaaaacatttataattgcacaaaaaactatatacatttagaaagttgttcatgattattgtccca |
186 |
Q |
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| T |
49701929 |
ttaaaatcatttttggaagaaaacatttataattgcacaaaaaactatatacatttagaaagttgttcatgattattgtccca |
49701847 |
T |
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