View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7397_low_6 (Length: 240)
Name: NF7397_low_6
Description: NF7397
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7397_low_6 |
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Alignment Details
Target: chr4 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 53459093 - 53459315
Alignment:
| Q |
1 |
tacaagagaataaacagagtttacttcacagaaacaattcctaaagccgcctcaggaaaaattctgcgaaaggaattaactgcaagacttaacgaaggtc |
100 |
Q |
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| T |
53459093 |
tacaagagaataaacagagtttacttcacagaaacaattcctaaagccgcctcaggaaaaattctgcgaaaggaattaactgcgagacttaacgaaggtc |
53459192 |
T |
|
| Q |
101 |
tagtagttgcaacaaattaagtccgtgtgtgacaaagatgaatacaattacaccaacttcatatgaaaatgcaattgtatgcatggagacaaaatatatt |
200 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53459193 |
tagtagttgccacaaattaagtccgtgtgtgacaaagatgaatacaattacaccaacttcatatgaaaatgcaattgtatgcatggagacaaaatatatt |
53459292 |
T |
|
| Q |
201 |
cccaaaacagtagaagtactatt |
223 |
Q |
| |
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||||||||| ||||||||||||| |
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| T |
53459293 |
cccaaaacaatagaagtactatt |
53459315 |
T |
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