View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7399_high_7 (Length: 250)
Name: NF7399_high_7
Description: NF7399
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7399_high_7 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 13 - 250
Target Start/End: Original strand, 48060084 - 48060321
Alignment:
| Q |
13 |
aatatctgagttacataaaattaattactgtttcacacataaacattgtgtgcatggaattatagttcatacaaatccaagtaaaactaattagttgcga |
112 |
Q |
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| T |
48060084 |
aatatctgagttacataaaattaattactgtttcacacataaacattgtgtgcatgaaattatagttcatacaaatccaagtaaaactaatcagttgcga |
48060183 |
T |
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| Q |
113 |
cacttggaatatgatgaatttgttaggagtctatcatcgattagtagctgtaaataaacttccctgaaaatgaagttttccaattcctggaaagtaatct |
212 |
Q |
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||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |
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| T |
48060184 |
cacttggaatatgatgaatttgttaggagtctatcgtcgattagtagctgtaaataaacttccctgaaaatgaagttgtccaattcctggaaagtaaact |
48060283 |
T |
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| Q |
213 |
tacccagctctatttagctgtgtttgtcatgcttatga |
250 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
48060284 |
tacccagctctatttagctgtgtttgtcatgcttatga |
48060321 |
T |
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