View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7400_high_25 (Length: 243)
Name: NF7400_high_25
Description: NF7400
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7400_high_25 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 20 - 243
Target Start/End: Original strand, 2359708 - 2359928
Alignment:
| Q |
20 |
ctacggtcgtgtccatcattacgggtacccataatgttctctannnnnnnnnnctctctagttcatttgctccatcatgcttttggctacggacaaggga |
119 |
Q |
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| T |
2359708 |
ctacggtcgtgtccatcattacgggtacccataatgttctct---ttttttttctctctagttcatttgctccatcatgcttttggctacggacaaggga |
2359804 |
T |
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| Q |
120 |
cttttggctatagctatagtatcatatatcttgatcagtttttaaccctttttgcactgatttggtcttcgattatcatcacgttaacatcaaaacctag |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2359805 |
cttttggctatagctatagtatcatatatcttgatcagtttttaaccctttttgcactgatttggtcttcgattatcatcacgttaacatcaaaacctag |
2359904 |
T |
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| Q |
220 |
ccaaatgcatcaaattcctcgttt |
243 |
Q |
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|||||||||||||||||||||||| |
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| T |
2359905 |
ccaaatgcatcaaattcctcgttt |
2359928 |
T |
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