View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7400_high_28 (Length: 239)
Name: NF7400_high_28
Description: NF7400
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7400_high_28 |
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Alignment Details
Target: chr4 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 45763237 - 45763015
Alignment:
| Q |
1 |
ttaccggcgatcaaaaacatcatgaagaagacgcattgaagttgttaccggagaatataggtggtggcgctggtggaggtggttcttcgggttctggatc |
100 |
Q |
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| T |
45763237 |
ttaccggcgatcaaaaacatcatgaagaagacgcattgaagttgttaccggagaatataggtggtggtgctggtggaggtggttcttctggttctggatc |
45763138 |
T |
|
| Q |
101 |
gttgctggaccatggtattgatttctctttgctgcagagtaaaacaagcaacggtggatttggatcgttggattggaatggtgatggtagtgctgatcat |
200 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45763137 |
gttgatggaccatggtattgatttctctttgctgcagagtaaaacaagcaacggtggatttggatcgttggattggaatggtgatggtagtgctgatcat |
45763038 |
T |
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| Q |
201 |
caaggtttgtttgatcttcctaa |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
45763037 |
caaggtttgtttgatcttcctaa |
45763015 |
T |
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