View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7400_high_4 (Length: 479)

Name: NF7400_high_4
Description: NF7400
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7400_high_4
NF7400_high_4
[»] chr6 (34 HSPs)
chr6 (138-466)||(29094885-29095214)
chr6 (138-392)||(17756886-17757140)
chr6 (137-468)||(4409196-4409529)
chr6 (137-469)||(23574393-23574725)
chr6 (138-442)||(15119590-15119891)
chr6 (138-440)||(18736029-18736331)
chr6 (144-442)||(18728948-18729246)
chr6 (138-468)||(8306064-8306390)
chr6 (138-469)||(14910604-14910936)
chr6 (254-447)||(7968479-7968672)
chr6 (141-467)||(18014329-18014656)
chr6 (138-469)||(29482590-29482922)
chr6 (138-441)||(15349496-15349800)
chr6 (167-469)||(18258492-18258795)
chr6 (275-440)||(19860057-19860222)
chr6 (138-347)||(21508507-21508716)
chr6 (276-469)||(12738494-12738688)
chr6 (174-468)||(24438465-24438760)
chr6 (136-440)||(15369490-15369795)
chr6 (138-413)||(3876374-3876649)
chr6 (280-441)||(15318989-15319150)
chr6 (337-468)||(18043340-18043472)
chr6 (134-227)||(27964966-27965059)
chr6 (140-254)||(18043493-18043607)
chr6 (306-405)||(23524128-23524227)
chr6 (138-240)||(23524249-23524351)
chr6 (140-219)||(19857705-19857784)
chr6 (375-442)||(19885769-19885837)
chr6 (320-412)||(31344233-31344324)
chr6 (367-469)||(14479994-14480096)
chr6 (244-312)||(14467174-14467242)
chr6 (320-356)||(15933504-15933540)
chr6 (368-412)||(7099325-7099369)
chr6 (368-412)||(8795261-8795305)
[»] chr4 (26 HSPs)
chr4 (138-469)||(13861313-13861644)
chr4 (137-469)||(25239694-25240026)
chr4 (191-469)||(17282412-17282690)
chr4 (137-468)||(12885280-12885611)
chr4 (137-468)||(10985582-10985912)
chr4 (138-468)||(3268334-3268665)
chr4 (138-468)||(21332413-21332743)
chr4 (138-442)||(12217588-12217885)
chr4 (135-442)||(26780681-26780988)
chr4 (138-392)||(16396135-16396389)
chr4 (250-468)||(3270546-3270765)
chr4 (138-319)||(18284484-18284665)
chr4 (138-442)||(45313174-45313476)
chr4 (138-466)||(8082047-8082375)
chr4 (138-439)||(9901571-9901871)
chr4 (230-440)||(49402721-49402932)
chr4 (138-468)||(28891910-28892243)
chr4 (291-442)||(34845478-34845630)
chr4 (404-469)||(18284661-18284725)
chr4 (169-299)||(26778764-26778894)
chr4 (409-469)||(10422046-10422106)
chr4 (162-217)||(8168007-8168062)
chr4 (137-195)||(15427951-15428009)
chr4 (137-195)||(15434569-15434627)
chr4 (276-442)||(15455467-15455633)
chr4 (137-194)||(3270771-3270828)
[»] chr5 (21 HSPs)
chr5 (138-469)||(20899465-20899796)
chr5 (138-469)||(23495348-23495678)
chr5 (137-469)||(36712518-36712849)
chr5 (191-469)||(5590619-5590897)
chr5 (143-462)||(33622365-33622686)
chr5 (138-468)||(5931190-5931521)
chr5 (138-469)||(28067893-28068224)
chr5 (138-353)||(22510097-22510312)
chr5 (138-338)||(13537860-13538060)
chr5 (154-442)||(15620077-15620364)
chr5 (177-468)||(42792481-42792772)
chr5 (138-468)||(8244511-8244846)
chr5 (138-469)||(38608266-38608608)
chr5 (148-469)||(41037524-41037855)
chr5 (161-397)||(19329816-19330052)
chr5 (276-469)||(22922645-22922839)
chr5 (138-318)||(24095343-24095523)
chr5 (278-469)||(22922050-22922242)
chr5 (218-259)||(31022310-31022351)
chr5 (140-182)||(5589312-5589354)
chr5 (367-440)||(23927179-23927252)
[»] chr7 (20 HSPs)
chr7 (135-466)||(18153131-18153462)
chr7 (137-469)||(21592743-21593077)
chr7 (154-469)||(47295567-47295881)
chr7 (262-469)||(18185624-18185831)
chr7 (137-466)||(30770056-30770384)
chr7 (138-469)||(29164848-29165178)
chr7 (138-439)||(20093566-20093866)
chr7 (169-468)||(21802450-21802750)
chr7 (136-415)||(7595403-7595686)
chr7 (134-419)||(22705649-22705933)
chr7 (138-469)||(2249860-2250193)
chr7 (138-468)||(9548828-9549168)
chr7 (138-406)||(38612620-38612888)
chr7 (365-468)||(22703896-22704000)
chr7 (135-403)||(30764846-30765114)
chr7 (138-282)||(40635506-40635648)
chr7 (140-335)||(21801716-21801911)
chr7 (326-469)||(28794084-28794227)
chr7 (320-412)||(5632684-5632775)
chr7 (375-442)||(6445101-6445168)
[»] scaffold0096 (1 HSPs)
scaffold0096 (138-469)||(10741-11072)
[»] scaffold0265 (3 HSPs)
scaffold0265 (142-469)||(14871-15204)
scaffold0265 (138-328)||(17194-17384)
scaffold0265 (365-469)||(17086-17190)
[»] chr1 (14 HSPs)
chr1 (142-469)||(21817605-21817938)
chr1 (138-469)||(24973756-24974086)
chr1 (134-468)||(19967284-19967618)
chr1 (140-468)||(19441982-19442310)
chr1 (138-328)||(21815425-21815615)
chr1 (137-440)||(9858996-9859303)
chr1 (135-365)||(49472309-49472536)
chr1 (328-469)||(22186045-22186186)
chr1 (140-442)||(38621830-38622132)
chr1 (138-442)||(8995308-8995610)
chr1 (273-469)||(8990765-8990962)
chr1 (365-469)||(21815619-21815723)
chr1 (136-253)||(33029009-33029126)
chr1 (375-460)||(170684-170769)
[»] chr8 (21 HSPs)
chr8 (138-469)||(25820716-25821047)
chr8 (137-468)||(18040356-18040680)
chr8 (139-468)||(32008884-32009213)
chr8 (141-433)||(18573889-18574181)
chr8 (169-468)||(2085642-2085942)
chr8 (137-469)||(7999649-7999980)
chr8 (137-442)||(41280676-41280982)
chr8 (138-469)||(7454521-7454867)
chr8 (139-469)||(24060557-24060888)
chr8 (281-440)||(10532801-10532960)
chr8 (140-441)||(11709396-11709709)
chr8 (181-468)||(24033762-24034053)
chr8 (138-466)||(33273391-33273704)
chr8 (138-406)||(22609363-22609631)
chr8 (387-469)||(1788650-1788732)
chr8 (162-320)||(10532633-10532791)
chr8 (162-299)||(17775790-17775926)
chr8 (229-390)||(1038940-1039103)
chr8 (369-446)||(9251511-9251588)
chr8 (326-390)||(22282161-22282225)
chr8 (320-360)||(45503915-45503955)
[»] scaffold0362 (1 HSPs)
scaffold0362 (137-469)||(7217-7549)
[»] chr2 (18 HSPs)
chr2 (138-469)||(27347170-27347499)
chr2 (138-468)||(3770260-3770591)
chr2 (138-468)||(23755687-23756018)
chr2 (135-468)||(41266062-41266396)
chr2 (138-442)||(25133793-25134106)
chr2 (179-442)||(42534032-42534295)
chr2 (137-469)||(3105203-3105536)
chr2 (162-435)||(26154875-26155148)
chr2 (252-469)||(23929796-23930014)
chr2 (138-437)||(19092753-19093051)
chr2 (276-468)||(29568315-29568507)
chr2 (138-253)||(23932895-23933010)
chr2 (390-468)||(26159154-26159233)
chr2 (137-418)||(22452688-22452968)
chr2 (175-254)||(12094306-12094384)
chr2 (172-259)||(29569049-29569136)
chr2 (138-200)||(26159096-26159158)
chr2 (375-448)||(12094111-12094184)
[»] scaffold0084 (1 HSPs)
scaffold0084 (138-436)||(54473-54770)
[»] scaffold0002 (2 HSPs)
scaffold0002 (134-469)||(391458-391795)
scaffold0002 (138-467)||(380763-381092)
[»] scaffold0150 (1 HSPs)
scaffold0150 (138-442)||(29926-30230)
[»] scaffold0042 (2 HSPs)
scaffold0042 (138-442)||(68700-69004)
scaffold0042 (275-442)||(74872-75039)
[»] chr3 (16 HSPs)
chr3 (138-398)||(19790346-19790606)
chr3 (138-444)||(16852878-16853183)
chr3 (140-469)||(22915051-22915379)
chr3 (138-442)||(3558990-3559291)
chr3 (167-469)||(16914705-16915008)
chr3 (167-393)||(44635823-44636050)
chr3 (371-443)||(22006518-22006590)
chr3 (371-443)||(22014035-22014107)
chr3 (388-468)||(1998006-1998087)
chr3 (394-469)||(19773385-19773462)
chr3 (138-205)||(31530488-31530555)
chr3 (167-242)||(13016462-13016537)
chr3 (320-442)||(3786560-3786681)
chr3 (217-262)||(36602466-36602511)
chr3 (367-412)||(36639651-36639696)
chr3 (291-355)||(1694130-1694194)
[»] scaffold0008 (2 HSPs)
scaffold0008 (140-468)||(242673-243002)
scaffold0008 (138-469)||(253312-253644)
[»] scaffold0280 (1 HSPs)
scaffold0280 (138-465)||(909-1237)
[»] scaffold0026 (1 HSPs)
scaffold0026 (142-468)||(151164-151490)
[»] scaffold0170 (1 HSPs)
scaffold0170 (138-440)||(16185-16487)
[»] scaffold0034 (2 HSPs)
scaffold0034 (248-468)||(47394-47615)
scaffold0034 (154-241)||(56243-56330)
[»] scaffold0083 (1 HSPs)
scaffold0083 (138-469)||(4065-4397)
[»] scaffold0989 (1 HSPs)
scaffold0989 (190-468)||(1444-1721)
[»] scaffold0192 (1 HSPs)
scaffold0192 (135-469)||(12322-12654)
[»] scaffold0058 (3 HSPs)
scaffold0058 (216-467)||(1609-1861)
scaffold0058 (317-469)||(15364-15517)
scaffold0058 (167-244)||(15524-15601)
[»] scaffold0013 (1 HSPs)
scaffold0013 (135-441)||(37092-37397)
[»] scaffold0111 (1 HSPs)
scaffold0111 (138-442)||(2697-3002)
[»] scaffold0063 (3 HSPs)
scaffold0063 (154-418)||(36665-36928)
scaffold0063 (327-418)||(49284-49375)
scaffold0063 (175-259)||(49133-49217)
[»] scaffold0299 (1 HSPs)
scaffold0299 (365-468)||(19150-19254)
[»] scaffold0483 (1 HSPs)
scaffold0483 (137-356)||(9247-9462)
[»] scaffold1272 (1 HSPs)
scaffold1272 (137-240)||(1972-2075)
[»] scaffold0025 (1 HSPs)
scaffold0025 (331-469)||(86424-86563)
[»] scaffold0011 (1 HSPs)
scaffold0011 (154-440)||(20170-20455)
[»] scaffold0321 (1 HSPs)
scaffold0321 (138-198)||(18247-18307)
[»] scaffold0233 (1 HSPs)
scaffold0233 (320-356)||(16044-16080)


Alignment Details
Target: chr6 (Bit Score: 270; Significance: 1e-150; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 138 - 466
Target Start/End: Original strand, 29094885 - 29095214
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    |||||||||||| || ||| |||||||| |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||    
T  29094885 tgttctggaccgaccaaaaagatctttggcccattcacttaggcccaataccatccaaagcccaaacaccacgtttggcaaaattactcgcgacacaccc 29094984  T
Q  238 cttccacgcgagggg-ggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacac 336  Q
    ||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  29094985 cttccacgcgagggggggtgcacggaacgaaagagaccggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcacaggcggttacac 29095084  T
Q  337 ttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggta 436  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29095085 ttcccacgatttcgtaaccgtcagagttaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggta 29095184  T
Q  437 gaatctttcttcctctcaaaccctcactct 466  Q
    ||||||||||||||||||||||||||||||    
T  29095185 gaatctttcttcctctcaaaccctcactct 29095214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 138 - 392
Target Start/End: Original strand, 17756886 - 17757140
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    ||||| ||||||||| |||||||||||| | |||||||||||||| ||||| ||| ||||||||||||| ||||||||||||||||||||  ||||||||    
T  17756886 tgttcgggaccggccaaaaggatctttgacacatttacttaggcctaatacaatcgaaagcccaaacaccacgtttggcaaaattactcgcgacacaccc 17756985  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 337  Q
    |||||||||||||||||||||| |||||||| ||   |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  17756986 cttccacgcgaggggggtgcacggaacgaaaaagattggttcaaacgaaccccaacgtctctttccacgttcccacaataaactcacaggcggttacact 17757085  T
Q  338 tcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagc 392  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||    
T  17757086 tcccacgattttgtaaccgtcagagtaaggtgtgccattacaacggctcggcagc 17757140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 137 - 468
Target Start/End: Complemental strand, 4409529 - 4409196
Alignment:
Q  137 ttgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaa-cacaacgtttggcaaaattactcgtaacacac 235  Q
    ||||||| || ||||| ||||||  |||| ||||||||||||||||||||| ||| ||||||||||| ||| ||||||| |||| ||||| || ||||||    
T  4409529 ttgttctcgatcggccaaaaggacatttggcccatttacttaggcccaatatcattcaaagcccaaaacaccacgtttgacaaagttacttgtgacacac 4409430  T
Q  236 cccttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttaca 335  Q
    ||||| ||||| |||||||||||| || |||||||| | |||||||||||||| |||||||||| | || ||||||||||||||| | |  |||||||||    
T  4409429 ccctttcacgcaaggggggtgcacggagcgaaagagactggttcaaacgaaccacaacgtctctatgcacgttcccgcaataaacgccctagcggttaca 4409330  T
Q  336 cttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggt 435  Q
    |||| |||||||| ||||||| ||| | |||||||||||||  ||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  4409329 cttctcacgattttgtaaccgccagagcaaggtgtgccattgtaacggctttgcagccctccacctctataaatagaggattcaatgcagtccccaaggt 4409230  T
Q  436 agaatc--tttcttcctctcaaaccctcactctct 468  Q
    ||||||  | ||||||||| |||||||||||||||    
T  4409229 agaatctatctcttcctct-aaaccctcactctct 4409196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 137 - 469
Target Start/End: Complemental strand, 23574725 - 23574393
Alignment:
Q  137 ttgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacacc 236  Q
    ||||||||||||| || |||||| ||||| |||||||||||||||||||||| ||||||||||||||||| ||||||| |||| ||||| || | |||||    
T  23574725 ttgttctggaccgcccaaaaggacctttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttgacaaagttacttgtgatacacc 23574626  T
Q  237 ccttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacac 336  Q
    |||| | | | |||| | ||||| || |||| ||| | |||||||||||||| |||||||||| | ||||||| |||||||||||| | || ||||||||    
T  23574625 cctttcccacaagggcg-tgcacggagcgaacgagactggttcaaacgaaccacaacgtctctctacatgttctcgcaataaactctctggtggttacac 23574527  T
Q  337 ttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggta 436  Q
    || |||||| |||||||| | ||| |  | |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||    
T  23574526 tttccacgacttcgtaacagccagagccaagtgtgccattacaacggctctgcagccctctacctctataaataggggactcaaagcagtccacaaggta 23574427  T
Q  437 gaatc--tttcttcctctcaaaccctcactctctg 469  Q
    |||||  | ||||||||| ||||||||||||||||    
T  23574426 gaatctatctcttcctct-aaaccctcactctctg 23574393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 138 - 442
Target Start/End: Original strand, 15119590 - 15119891
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    ||||||||||||||| |||||| ||| | |||||||||||||||||||||| ||||| ||||||||||| ||||||| |||| |||||  | ||||||||    
T  15119590 tgttctggaccggccaaaaggaccttgg-cccatttacttaggcccaatacaatccagagcccaaacaccacgtttgacaaagttacttatgacacaccc 15119688  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 337  Q
    ||||||| | |||||||||||||||  ||||||| | |||||||||||||| |||||||||| | || ||||||||||||||||| |  ||||||| |||    
T  15119689 cttccacacaaggggggtgcacagagtgaaagagacaggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctctagcggttatact 15119788  T
Q  338 tcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtag 437  Q
    ||||||||||| ||||||| ||| |  |||||||||||||||  ||||||||| | |||||||||||||||||||||||||||  || ||||||||||||    
T  15119789 tcccacgattttgtaaccgccagagccaggtgtgccattacactggctctgcaactctccacctctataaataggggactcaa--caatccccaaggtag 15119886  T
Q  438 aatct 442  Q
    |||||    
T  15119887 aatct 15119891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 138 - 440
Target Start/End: Complemental strand, 18736331 - 18736029
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    ||||||||||||||| ||||||| |||| |||||||||||||||||||||  ||||||||||||||||| |||||||||||| ||||| | || | ||||    
T  18736331 tgttctggaccggccaaaaggatttttggcccatttacttaggcccaataatatccaaagcccaaacaccacgtttggcaaacttacttgcaatataccc 18736232  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 337  Q
    ||| | ||| || ||||||||| || |||  |||   ||||||||||| || |||||||||| | || ||||||||||||||||| | |||| ||| |||    
T  18736231 ctttcccgcaagaggggtgcacggagcgagcgagattggttcaaacgagccacaacgtctctctacacgttcccgcaataaactctctggcgattagact 18736132  T
Q  338 tcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtag 437  Q
    |||||| |||||||||||| ||| |  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| |||    
T  18736131 tcccacaatttcgtaaccgccagagccaggtgtgccattacaacggctcagcagccctccacctctataaataggggactcatagcagtccccaagctag 18736032  T
Q  438 aat 440  Q
    |||    
T  18736031 aat 18736029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 144 - 442
Target Start/End: Complemental strand, 18729246 - 18728948
Alignment:
Q  144 ggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccccttcca 243  Q
    |||| |||| |||||||||||| |||||||||||||||| ||||| ||||||| ||||||||| ||||||| |||| ||||| |||||||||| ||| |     
T  18729246 ggacaggccaaaaggatctttggcccatttacttaggcctaatactatccaaaacccaaacaccacgtttgacaaacttacttgtaacacaccgctttcc 18729147  T
Q  244 cgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacacttcccac 343  Q
    ||| ||| |||||||| || |||| ||| |||||||||| || || |||||||||| | || ||| |||||||||||||   ||||||||||||||||||    
T  18729146 cgcaaggagggtgcacggagcgaacgagaccggttcaaaggagccacaacgtctctctgcacgtttccgcaataaactctatggcggttacacttcccac 18729047  T
Q  344 gatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatct 442  Q
    ||||| ||| ||| ||| |  |||||| ||||||||| | ||||||||||||||||||||||||||||||||||||   |||||| |||||||||||||    
T  18729046 gattttgtacccgccagagccaggtgttccattacaatgtctctgcagccctccacctctataaataggggactcataacagtcctcaaggtagaatct 18728948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 138 - 468
Target Start/End: Complemental strand, 8306390 - 8306064
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    ||||||||||||| | ||||||  |||| ||||| |||||||||||||||| ||| ||||||||||||  ||||||| |||| ||||| | ||||  |||    
T  8306390 tgttctggaccggtcaaaaggacatttggcccatatacttaggcccaatacgatctaaagcccaaacatcacgtttgacaaagttacttgcaacatcccc 8306291  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 337  Q
    ||| || |  | || |||||||||| |||||||| | |||||||||||  | |||||||||| |  | ||||||||||||||||| | ||||||||||||    
T  8306290 ctttca-gacaaggaggtgcacagagcgaaagagactggttcaaacgagtcacaacgtctctctgtaggttcccgcaataaactctctggcggttacact 8306192  T
Q  338 tcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtag 437  Q
    | ||| |||||| |||| |  || || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||    
T  8306191 ttccatgatttcataactgctagagtcaggtgtgccattacaacggctctgcaaccctccacctctataaataggggactcacagcagtccccaaggtag 8306092  T
Q  438 aatctttcttcctctcaaaccctcactctct 468  Q
    ||||  ||||||||| |||||||||||||||    
T  8306091 aatc--tcttcctct-aaaccctcactctct 8306064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 138 - 469
Target Start/End: Complemental strand, 14910936 - 14910604
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    ||||||||||||||| |||||| ||||  ||||||||||||||| |||||  |||||||| |||||||| || |||||||| |||| | |  ||||||||    
T  14910936 tgttctggaccggccaaaaggaccttttgcccatttacttaggcacaatagaatccaaagtccaaacaccacatttggcaacattatttgcgacacaccc 14910837  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 337  Q
    ||||| |   | |||||||||| || |||   || |||||||||||||||| |||||||||| | || |||||||||||||||||   ||||||||||||    
T  14910836 cttccccaa-atgggggtgcacggagcgagcaagaccggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctatggcggttacact 14910738  T
Q  338 tcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtag 437  Q
    |||||| |||||||||| | ||| |  | ||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  14910737 tcccacaatttcgtaactgccagagcgatgtgtgccattacaacggctttgcagccctccacctctatatataggggactcactgcagtccccaaggtag 14910638  T
Q  438 aa-tctt--tcttcctctcaaaccctcactctctg 469  Q
    || |||   ||||||||| ||||||||||||||||    
T  14910637 aaatctagctcttcctct-aaaccctcactctctg 14910604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 254 - 447
Target Start/End: Original strand, 7968479 - 7968672
Alignment:
Q  254 gtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacacttcccacgatttcgtaa 353  Q
    |||||| ||||||||||| | |||||||||||||| |||||||||| | || |||||| |||||||| | | ||||||||||||| |||| |||||||||    
T  7968479 gtgcacggaacgaaagagactggttcaaacgaaccacaacgtctctctgcacgttcccacaataaaccccctggcggttacactttccacaatttcgtaa 7968578  T
Q  354 ccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatctttctt 447  Q
    ||| ||| || ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||    
T  7968579 ccgccagagtcaggtgtgccattacaacagctctgcagccctccacctctatatataggggactcaatgcagtccccaaggcagaatctatctt 7968672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 141 - 467
Target Start/End: Original strand, 18014329 - 18014656
Alignment:
Q  141 tctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacacccctt 240  Q
    |||||||||||| ||| || ||||| ||||||||||||||| |||||| ||||| || ||| |||| || | |||||| |||||| |  ||| |||||||    
T  18014329 tctggaccggccaaaatgagctttggcccatttacttaggctcaatacaatccacagaccagacactacatgtggcaatattacttgcgacaaacccctt 18014428  T
Q  241 ccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacacttcc 340  Q
    || |||||||||||||||| || |||   || || ||||||||||||| ||| || |   |  | ||||||||||||| ||| | || ||||| ||||||    
T  18014429 ccccgcgaggggggtgcacggagcgagcaagaccagttcaaacgaaccacaatgtttgactgtacgttcccgcaataatctctctggtggttagacttcc 18014528  T
Q  341 cacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaat 440  Q
    |||||||||||||||| ||| |  ||||||||||||||||||||||||||||||||||||||||||  |||||||||||  |||||||||||||||||||    
T  18014529 cacgatttcgtaaccgccagagctaggtgtgccattacaacggctctgcagccctccacctctatatgtaggggactcatagcagtccccaaggtagaat 18014628  T
Q  441 c--tttcttcctctcaaaccctcactctc 467  Q
    |  | |||||||||  |||||||||||||    
T  18014629 caatctcttcctct-taaccctcactctc 18014656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 138 - 469
Target Start/End: Complemental strand, 29482922 - 29482590
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    |||||||||  |||| |||||||||||| |||||||||| |||||||| || ||||||||||||||| | ||||||||||| |||||| |  ||||||||    
T  29482922 tgttctggaaaggccaaaaggatctttggcccatttactcaggcccaacacaatccaaagcccaaacgccacgtttggcaacattacttgcgacacaccc 29482823  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 337  Q
    |||   |   |  | | ||||| || |||  ||| ||||||||||||| || |||||||||| | |||||||||||||||||||| |   | |||| |||    
T  29482822 cttttcccacaaagtgctgcacggagcgagcgagaccggttcaaacgagccacaacgtctctctgcatgttcccgcaataaactctctcacagttatact 29482723  T
Q  338 tcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtag 437  Q
    |||||||||||||||||||  ||    |||||||||||||||||| |||| |||||||||||||||||||||||||||||||  | ||||||||||||||    
T  29482722 tcccacgatttcgtaaccgctagaaccaggtgtgccattacaacgactctacagccctccacctctataaataggggactcatagtagtccccaaggtag 29482623  T
Q  438 aatc--tttcttcctctcaaaccctcactctctg 469  Q
    ||||  | ||||||||| |||||| |||||||||    
T  29482622 aatctatctcttcctct-aaacccccactctctg 29482590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 138 - 441
Target Start/End: Original strand, 15349496 - 15349800
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    ||||||||||||| | |||||||||| | ||| ||||||||||||| |||| ||||||||  ||||||| | ||||||||| |||||| | |||||||||    
T  15349496 tgttctggaccggtcaaaaggatcttaggcccgtttacttaggcccgatacaatccaaagatcaaacaccatgtttggcaatattacttgcaacacaccc 15349595  T
Q  238 cttcca-cgcgaggggggtgcacagaacgaaagaggccggttcaaa-cgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttaca 335  Q
     ||||| ||||  ||||||||||||| |     || |||||||||| |||||| |||| ||||||| || |||||| |||||| ||| |  |||||||||    
T  15349596 -ttccatcgcggagggggtgcacagagcatgcaagaccggttcaaaacgaaccacaacatctctttgcacgttcccacaataatctctctcgcggttaca 15349694  T
Q  336 cttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggt 435  Q
    ||||||||||||||||||||| |||    |||||||| || |||||||||||||||||||||||||||||| |||||||||||   ||||||||||| ||    
T  15349695 cttcccacgatttcgtaaccgccagacccaggtgtgctatcacaacggctctgcagccctccacctctatatataggggactcttagcagtccccaacgt 15349794  T
Q  436 agaatc 441  Q
    ||||||    
T  15349795 agaatc 15349800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 167 - 469
Target Start/End: Original strand, 18258492 - 18258795
Alignment:
Q  167 cccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccccttccacgcgaggggggtgcacagaacga 266  Q
    |||||||||||||||||||||| ||||||||||||||||| | |||| ||||| ||||| | | || |||| |||  | | | ||||||||||  | |||    
T  18258492 cccatttacttaggcccaatacaatccaaagcccaaacaccatgttttgcaaacttacttgcagcataccctttctccacaaagggggtgcacgaagcga 18258591  T
Q  267 aagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacacttcccacgatttcgtaaccgtcagtgtaag 366  Q
      ||| |||||||||| ||||| ||||||||||   ||  ||||||||||||||||    || |||||||||||||| ||||||||||| |||| |  ||    
T  18258592 gtgagaccggttcaaaggaaccacaacgtctctccgcacattcccgcaataaactctttagcagttacacttcccacaatttcgtaaccatcagagccag 18258691  T
Q  367 gtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatctttcttcctctc-aaaccctcactc 465  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||||   ||||| |||||||||||||| | ||  |||| ||||||||||||    
T  18258692 gtgtgccactacaacggctctacagccctctacctctataaataggggactcacaacagtctccaaggtagaatctatatttttctctaaaccctcactc 18258791  T
Q  466 tctg 469  Q
    ||||    
T  18258792 tctg 18258795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 275 - 440
Target Start/End: Original strand, 19860057 - 19860222
Alignment:
Q  275 ggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacacttcccacgatttcgtaaccgtcagtgtaaggtgtgcca 374  Q
    |||||||||||||| ||||||||||   ||||||||| |||||| ||| | || |||||||||||||||||||||||||||| ||| |  |||||| |||    
T  19860057 ggttcaaacgaaccgcaacgtctctcaacatgttcccacaataatctctctggtggttacacttcccacgatttcgtaaccgccagagccaggtgtccca 19860156  T
Q  375 ttacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaat 440  Q
    |||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  19860157 ttacaacggctccgcagccctccacctctataaataggggactcacagcagtccccaaggtagaat 19860222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 138 - 347
Target Start/End: Original strand, 21508507 - 21508716
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    ||||||||| ||||| || ||| ||||| |||||||||||||||||||||| ||||||||| ||||||| ||||||| |||| ||||| | |||||||||    
T  21508507 tgttctggatcggccaaagggacctttggcccatttacttaggcccaatacaatccaaagctcaaacaccacgtttgacaaagttacttgcaacacaccc 21508606  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 337  Q
    |||||| || |||||||||||| || |||||||| | ||||||| |||||| || ||||||| | || ||||| |||||||||||   ||||||||||||    
T  21508607 cttccatgcaaggggggtgcacggagcgaaagagactggttcaatcgaaccacagcgtctctctgcacgttcctgcaataaactctatggcggttacact 21508706  T
Q  338 tcccacgatt 347  Q
    ||||||||||    
T  21508707 tcccacgatt 21508716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 276 - 469
Target Start/End: Complemental strand, 12738688 - 12738494
Alignment:
Q  276 gttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacacttcccacgatttcgtaaccgtcagtgtaaggtgtgccat 375  Q
    ||||||||||||| |||||||||| | || ||||||||||||||||| |  | ||||||||||||||||||||||||| |||||  |  || ||||||||    
T  12738688 gttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctctagaggttacacttcccacgatttcgtaatcgtcatagccagatgtgccat 12738589  T
Q  376 tacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatc--tttcttcctctcaaaccctcactctctg 469  Q
    ||||||||||||||| ||||||||||||||||||||||||||||  ||||||||| ||||||||||  | ||||||||| |||||| |||||||||    
T  12738588 tacaacggctctgcaaccctccacctctataaataggggactcatagcagtcccctaggtagaatctatctcttcctct-aaacccccactctctg 12738494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 174 - 468
Target Start/End: Original strand, 24438465 - 24438760
Alignment:
Q  174 acttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccccttccacgcgaggggg-gtgcacagaacgaaagagg 272  Q
    |||| |||||||||| ||||||||  ||||||| || |||||| |  ||||| | |||||||||||||||||| |||||| |||||| |   |||||||     
T  24438465 actttggcccaatacaatccaaagttcaaacaccacatttggctatgttacttgcaacacaccccttccacgcaagggggtgtgcacggggagaaagaga 24438564  T
Q  273 ccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacacttcccacgatttcgtaaccgtcagtgtaaggtgtgc 372  Q
      |||||||||||||| || ||||||||| || ||||| ||||| |||||   |||||||||||||||||||||||||||||||  || |  |||||||     
T  24438565 ttggttcaaacgaaccacatcgtctctttgcacgttcctgcaatcaactctatggcggttacacttcccacgatttcgtaaccgcaagagccaggtgtgt 24438664  T
Q  373 cattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatc--tttcttcctctcaaaccctcactctct 468  Q
    |||||||||| |||||||  |||| ||||||||||||||||||||||  ||||| ||||||||| ||||  | ||||||||| |||||||||||||||    
T  24438665 cattacaacgactctgcaatcctctacctctataaataggggactcacagcagt-cccaaggtataatctatctcttcctct-aaaccctcactctct 24438760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 136 - 440
Target Start/End: Original strand, 15369490 - 15369795
Alignment:
Q  136 attgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacac 235  Q
    ||||||||||||||||| |||||||||| | | |||||||||| ||||||||  ||||||||| ||||||| ||||||||||| ||| || | |||||||    
T  15369490 attgttctggaccggccaaaaggatcttaggcgcatttacttaagcccaatataatccaaagctcaaacaccacgtttggcaatattccttgcaacacac 15369589  T
Q  236 cccttccacgcgaggggggtgcacagaacgaaagaggccggttcaaa-cgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttac 334  Q
    || | |  ||||| || ||||||  || |  |  || |||||||||| |||||| |||| ||||||| || ||||||||||||| ||  | |||||||||    
T  15369590 ccttccttcgcgaaggcggtgcaaggagcatacaagaccggttcaaaacgaaccacaacttctctttgcacgttcccgcaataatctgtctggcggttac 15369689  T
Q  335 acttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaagg 434  Q
    |||||| || |||||||||||| |||    |||||| |||| | |||| |||| |||||||||||||||||| |||| ||||||   |||||||||||||    
T  15369690 acttcctacaatttcgtaaccgccagacctaggtgtaccatcataacgactctacagccctccacctctatatatagaggactcttagcagtccccaagg 15369789  T
Q  435 tagaat 440  Q
    ||||||    
T  15369790 tagaat 15369795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 138 - 413
Target Start/End: Complemental strand, 3876649 - 3876374
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    ||||||||||||||| ||||||  || |  ||||||| |||||||||| ||  ||| ||||||||||   |||||||||||| ||||| || ||| ||||    
T  3876649 tgttctggaccggccaaaaggactttaggtccatttatttaggcccaacacagtcccaagcccaaacttcacgtttggcaaacttacttgtgacataccc 3876550  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 337  Q
    ||||  ||||| |||||||||| || | |   ||  ||||||||| || |  |||||||||||| ||| |||||||||||| ||| | | || |||||||    
T  3876549 cttctccgcgaagggggtgcacggagcaagcaagatcggttcaaatgagctacaacgtctctttgcatattcccgcaataatctctctgacgattacact 3876450  T
Q  338 tcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggg 413  Q
    ||| ||||||||||||||| |||  | ||||||| | | |||||||||||||||||||||||||||||| ||||||    
T  3876449 tcctacgatttcgtaaccgccagacttaggtgtgtcttcacaacggctctgcagccctccacctctatatataggg 3876374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 280 - 441
Target Start/End: Original strand, 15318989 - 15319150
Alignment:
Q  280 aaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacacttcccacgatttcgtaaccgtcagtgtaaggtgtgccattaca 379  Q
    ||||||||| |||| ||||||| || ||||| ||||||| ||| |  |||||||||||||||||||||||||||||| |||    |||||| |||| |||    
T  15318989 aaacgaaccacaacttctctttgcacgttcctgcaataatctctctagcggttacacttcccacgatttcgtaaccgccagacctaggtgtaccatcaca 15319088  T
Q  380 acggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatc 441  Q
    ||| ||||||||||||||||||||||| |||||| ||||   ||||||||||||||||||||    
T  15319089 acgactctgcagccctccacctctatatatagggaactcttagcagtccccaaggtagaatc 15319150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 337 - 468
Target Start/End: Complemental strand, 18043472 - 18043340
Alignment:
Q  337 ttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggta 436  Q
    |||||| ||||||||| ||| ||| || | | ||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18043472 ttcccatgatttcgtacccgccagagtcatgcgtgtcattacaacggctttgcagccctccacctctataaataggggactaaatgcagtccccaaggta 18043373  T
Q  437 gaa--tctttcttcctctcaaaccctcactctct 468  Q
    |||  | | ||||||||| |||||||||||||||    
T  18043372 gaatttatctcttcctct-aaaccctcactctct 18043340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 134 - 227
Target Start/End: Complemental strand, 27965059 - 27964966
Alignment:
Q  134 ttattgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcg 227  Q
    |||||||| |||||| ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||    
T  27965059 ttattgttttggaccagccaaaaggatctttggcccatttacttaggcccaatatcatccaaagcccaaacaccacgtttggtaaaattactcg 27964966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 140 - 254
Target Start/End: Complemental strand, 18043607 - 18043493
Alignment:
Q  140 ttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacacccct 239  Q
    ||||||||||||| |||||| ||||| ||||||||||||||||||||||||| |||||||||||||  |||||||||||| ||||| |  | ||||||||    
T  18043607 ttctggaccggccaaaaggacctttggcccatttacttaggcccaataccattcaaagcccaaacatcacgtttggcaaagttacttgcgatacacccct 18043508  T
Q  240 tccacgcgagggggg 254  Q
    | ||||| |||||||    
T  18043507 ttcacgcaagggggg 18043493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 306 - 405
Target Start/End: Complemental strand, 23524227 - 23524128
Alignment:
Q  306 gttcccgcaataaactcacaggcggttacacttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctat 405  Q
    |||||||||||||||||   |  |||||||||| |||||||||| |||||| ||| |  |||||||||||||||| |||||||||||||||||| |||||    
T  23524227 gttcccgcaataaactctttgatggttacactttccacgatttcttaaccgccagagccaggtgtgccattacaatggctctgcagccctccacgtctat 23524128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 138 - 240
Target Start/End: Complemental strand, 23524351 - 23524249
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    ||||||||||||||| || ||| ||||| ||||||||||||||  |||||| | ||||||||||||||| |||||| ||||| ||||| |  ||||||||    
T  23524351 tgttctggaccggccaaagggacctttggcccatttacttaggtacaatacaacccaaagcccaaacaccacgttttgcaaagttacttgcgacacaccc 23524252  T
Q  238 ctt 240  Q
    |||    
T  23524251 ctt 23524249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 19857705 - 19857784
Alignment:
Q  140 ttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaa 219  Q
    |||||||||| || |||||| ||||| | ||||||||||||| |||||| ||||||||| ||||||| ||||||||||||    
T  19857705 ttctggaccgaccaaaaggacctttggcgcatttacttaggctcaatacaatccaaagctcaaacaccacgtttggcaaa 19857784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 442
Target Start/End: Complemental strand, 19885837 - 19885769
Alignment:
Q  375 ttacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaa-ggtagaatct 442  Q
    ||||||||||||||||||| ||| |||||||| | |||||||||  |||||||||||| ||||||||||    
T  19885837 ttacaacggctctgcagccatccgcctctatataaaggggactctttgcagtccccaagggtagaatct 19885769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 320 - 412
Target Start/End: Original strand, 31344233 - 31344324
Alignment:
Q  320 ctcacaggcggttacacttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaatagg 412  Q
    ||||| ||||||||||||||  ||||||||||||||||| ||   | ||||||| ||||||||||||||||  |  |||||||||||||||||    
T  31344233 ctcaccggcggttacacttcttacgatttcgtaaccgtcggtcacacgtgtgcc-ttacaacggctctgcattcacccacctctataaatagg 31344324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 367 - 469
Target Start/End: Complemental strand, 14480096 - 14479994
Alignment:
Q  367 gtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatctttctt-cctctcaaaccctcactc 465  Q
    |||||||||||||| ||||||||||||  |||||  |||| |||||||||||    |||||||| ||||||||||| |||| ||||| ||||||||| ||    
T  14480096 gtgtgccattacaatggctctgcagccacccaccggtatatataggggactcttaacagtcccctaggtagaatctatcttccctct-aaaccctcattc 14479998  T
Q  466 tctg 469  Q
    ||||    
T  14479997 tctg 14479994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 14467242 - 14467174
Alignment:
Q  244 cgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccg 312  Q
    ||||||||||||||||| | | |||||| || ||||||||||||  ||||||||||| ||| |||||||    
T  14467242 cgcgaggggggtgcacaaagcaaaagagaccagttcaaacgaactacaacgtctcttcccacgttcccg 14467174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 320 - 356
Target Start/End: Original strand, 15933504 - 15933540
Alignment:
Q  320 ctcacaggcggttacacttcccacgatttcgtaaccg 356  Q
    ||||||||||||||||||||| |||||||||||||||    
T  15933504 ctcacaggcggttacacttcctacgatttcgtaaccg 15933540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 368 - 412
Target Start/End: Original strand, 7099325 - 7099369
Alignment:
Q  368 tgtgccattacaacggctctgcagccctccacctctataaatagg 412  Q
    |||||||||||||||||||||||  |  |||||||||||||||||    
T  7099325 tgtgccattacaacggctctgcattcacccacctctataaatagg 7099369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 368 - 412
Target Start/End: Complemental strand, 8795305 - 8795261
Alignment:
Q  368 tgtgccattacaacggctctgcagccctccacctctataaatagg 412  Q
    |||||||||||||||||||||||  |  |||||||||||||||||    
T  8795305 tgtgccattacaacggctctgcattcacccacctctataaatagg 8795261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 256; Significance: 1e-142; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 138 - 469
Target Start/End: Complemental strand, 13861644 - 13861313
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    ||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||  ||||||||    
T  13861644 tgttctggaccggccaaaaggatctttgactcatttacttaggcccaataccatccaaagcccaaacaccacgtctggtaaaattactcgcgacacaccc 13861545  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 337  Q
    |||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  13861544 cttccacgcgaggggggtgcacggaacgaaagataccggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcacaggcagttacact 13861445  T
Q  338 tcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtag 437  Q
    ||||||||||||||||| || || |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  13861444 tcccacgatttcgtaactgttagagtaaggtgtgccattacaacggctttgcagccctccacctctataaatagggaactcaatgcagtccccaaggtag 13861345  T
Q  438 aatctttcttcctctcaaaccctcactctctg 469  Q
    ||||||||||| ||||||||||||||||||||    
T  13861344 aatctttcttcttctcaaaccctcactctctg 13861313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 137 - 469
Target Start/End: Complemental strand, 25240026 - 25239694
Alignment:
Q  137 ttgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacacc 236  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||  ||||||||| |||||| ||||||| ||||||||||||  |||||||    
T  25240026 ttgttctggaccggccaaaaggatctttggcccatttacttaggcccaatacactccaaagcctaaacaccacgtttgacaaaattactcgcgacacacc 25239927  T
Q  237 ccttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacac 336  Q
     ||| |||||||||||||||||| ||||||||||| | |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  25239926 tctttcacgcgaggggggtgcacggaacgaaagagactggttcaaacgaaccccaaagtctctttccacgttcccgcaataaactcacaggcggttacac 25239827  T
Q  337 ttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggta 436  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25239826 ttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactaaatgcagtccccaaggta 25239727  T
Q  437 gaatctttcttcctctcaaaccctcactctctg 469  Q
    ||||||||||| |||||||||||||||||||||    
T  25239726 gaatctttctttctctcaaaccctcactctctg 25239694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 191 - 469
Target Start/End: Original strand, 17282412 - 17282690
Alignment:
Q  191 tccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccccttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaacccc 290  Q
    ||||||||||| |||| ||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||| | ||||| ||||||||||    
T  17282412 tccaaagcccagacaccacgtttggcaaaattactcgcgacacaccccttccacgcgaggggggtgcacggaacgaaagagactggttctaacgaacccc 17282511  T
Q  291 aacgtctctttccatgttcccgcaataaactcacaggcggttacacttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgca 390  Q
    |||||||||||||| ||||||||||||||| |||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  17282512 aacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcgtaaccgtcagagtaaggtgtgccattacaacggctctgca 17282611  T
Q  391 gccctccacctctataaataggggactcaatgcagtccccaaggtagaatctttcttcctctcaaaccctcactctctg 469  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  17282612 gccctccacctctataaataggggactcaatgcagtccccaaggtagaacctttcctcctctcaaaccctcactctctg 17282690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 137 - 468
Target Start/End: Complemental strand, 12885611 - 12885280
Alignment:
Q  137 ttgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacacc 236  Q
    ||||| |||||||||| ||||||  |||| |||||||||||||||||||||| ||||||| ||||||||| |||||||||||| ||||| | |||| |||    
T  12885611 ttgttttggaccggccaaaaggacttttgacccatttacttaggcccaatacaatccaaaacccaaacaccacgtttggcaaagttacttgcaacatacc 12885512  T
Q  237 ccttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacac 336  Q
    |||||| ||| |||||| ||||  || |||||||| | |||||||||||||| |||||||||||| || ||||||||||||||||| | |||||||||||    
T  12885511 ccttccccgcaaggggg-tgcatggagcgaaagagactggttcaaacgaaccacaacgtctctttgcacgttcccgcaataaactctctggcggttacac 12885413  T
Q  337 ttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggta 436  Q
    |||||||||||||||||||| ||| |  |||||||||||||||| |||||||||||||||||||| |||||||||||||||||   ||||||||||||||    
T  12885412 ttcccacgatttcgtaaccgccagagccaggtgtgccattacaatggctctgcagccctccacctttataaataggggactcacaacagtccccaaggta 12885313  T
Q  437 gaatc--tttcttcctctcaaaccctcactctct 468  Q
    |||||  | ||||||||| |||||||||| ||||    
T  12885312 gaatctatctcttcctct-aaaccctcaccctct 12885280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 137 - 468
Target Start/End: Original strand, 10985582 - 10985912
Alignment:
Q  137 ttgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacacc 236  Q
    |||||||||||||| | |||||| ||||| |||||||||||||||||||||| ||||||||  ||||||| |||||||||||| ||||| || |||||||    
T  10985582 ttgttctggaccgggcaaaaggacctttggcccatttacttaggcccaatacaatccaaaggtcaaacaccacgtttggcaaagttacttgtgacacacc 10985681  T
Q  237 ccttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacac 336  Q
    | |||| | | ||||| ||||||||| |||| ||| | |||||||||||||| |||||||||| | || ||||||||||||||||| | |||||||||||    
T  10985682 ctttccccacaagggg-gtgcacagagcgaacgagactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctctggcggttacac 10985780  T
Q  337 ttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggta 436  Q
    ||||||||||||||||||||  || |  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||| |||||||||    
T  10985781 ttcccacgatttcgtaaccgcgagagccaggtgtgccattacaacggctctgcagccatccacctctataaataggggactcacggcagt-cccaaggta 10985879  T
Q  437 gaatct--ttcttcctctcaaaccctcactctct 468  Q
    ||||||   |||||||| ||||||||||||||||    
T  10985880 gaatctacctcttcctc-caaaccctcactctct 10985912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 138 - 468
Target Start/End: Complemental strand, 3268665 - 3268334
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    ||||| ||||||||| |||||| ||||| ||||||||||||||| ||| || ||||| |||||||||||    ||||||||||||||| || ||||||||    
T  3268665 tgttcgggaccggccaaaaggacctttggcccatttacttaggctcaaaacaatccacagcccaaacaccgattttggcaaaattacttgtgacacaccc 3268566  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 337  Q
    ||||||| | |||||||||||| || ||| |||| | |||||||||||||| |||||||||| | || |||||||||||||||||   ||||||||||||    
T  3268565 cttccacacaaggggggtgcacggagcgacagagactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctatggcggttacact 3268466  T
Q  338 tcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtag 437  Q
    |||||||||| |||||||| ||| |  ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||  | |||| |||||||||    
T  3268465 tcccacgattacgtaaccgccagagccaggtgtgtcattacaatggctctgcagccctccacctctataaataggggactcacggaagtctccaaggtag 3268366  T
Q  438 aatctttcttcctctc-aaaccctcactctct 468  Q
    ||||| |||  | ||| |||||||||||||||    
T  3268365 aatctatctctccctctaaaccctcactctct 3268334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 138 - 468
Target Start/End: Original strand, 21332413 - 21332743
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    |||||| || ||||| ||| |||||||| |||||||||||||| ||||||| || ||||| |||||||| |||||||||||| ||||| |  ||||||||    
T  21332413 tgttctagatcggccaaaatgatctttggcccatttacttaggtccaatacaattcaaagtccaaacactacgtttggcaaagttacttgcgacacaccc 21332512  T
Q  238 ctt-ccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacac 336  Q
    ||| |||| | ||||| ||||||||| |||||||| | |||||||||||||| |||||||||| | || |||||| |||||||||  | |||||||| ||    
T  21332513 ctttccacacaagggg-gtgcacagagcgaaagagactggttcaaacgaaccacaacgtctctctacacgttcccacaataaactttctggcggttatac 21332611  T
Q  337 ttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggta 436  Q
    |||||| |||||||||| || ||| |  |||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||  ||||||||    
T  21332612 ttcccatgatttcgtaagcgccagagccaggtgtgccactacaacggctctgcagccctccacctctgtaaataggggactcaaagcagtttccaaggta 21332711  T
Q  437 gaatctttcttcctctcaaaccctcactctct 468  Q
    |||||| |||    ||||||||||||||||||    
T  21332712 gaatctatctcttcctcaaaccctcactctct 21332743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 138 - 442
Target Start/End: Complemental strand, 12217885 - 12217588
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    |||||||||| |||| |||||| ||||| ||||||||||||| || ||||| ||||| |||||||||||  ||||| ||||||||||| | |||||||||    
T  12217885 tgttctggactggccaaaaggacctttggcccatttacttagtcctaatacaatccacagcccaaacaccgcgtttagcaaaattacttgcaacacaccc 12217786  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 337  Q
    ||||||| | | |||||||||| || ||| |||| | |||||||||||||| |||||||||| | || ||||| ||||||||||| | ||||||||||||    
T  12217785 cttccacac-atgggggtgcacggagcgacagagactggttcaaacgaaccacaacgtctctctgcacgttcctgcaataaactctctggcggttacact 12217687  T
Q  338 tcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtag 437  Q
    ||| ||||||||||||||| ||| |  ||||      |||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||    
T  12217686 tcctacgatttcgtaaccgccagagccaggt------ttacaacggctctgcagccctccacctctataaataggggactcacgacagtccccaaggtag 12217593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 135 - 442
Target Start/End: Original strand, 26780681 - 26780988
Alignment:
Q  135 tattgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacaca 234  Q
    |||||||||||||||||| ||||||  |||| ||||||||| |||||||||||| || |||||||||||||| ||||||||||| |||||| |  |||||    
T  26780681 tattgttctggaccggccaaaaggagttttggcccatttacataggcccaatactattcaaagcccaaacaccacgtttggcaacattacttgctacaca 26780780  T
Q  235 ccccttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttac 334  Q
    |||||||   | |||||||||| |  ||  |||  ||||||| ||||||||||| |||||| ||| | || ||||||||||||| ||| | |||||||||    
T  26780781 ccccttctctgtgaggggggtgtagggagagaacaaggccggctcaaacgaaccacaacgtttctctgcacgttcccgcaataatctctctggcggttac 26780880  T
Q  335 acttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaagg 434  Q
    |||||||||| ||||||||||  ||| ||  |||||| ||||||||||||||||||||||||||||||| |  |||||||| |||   ||||||||||||    
T  26780881 acttcccacgttttcgtaaccaccagagtctggtgtgtcattacaacggctctgcagccctccacctctctgtataggggagtcataacagtccccaagg 26780980  T
Q  435 tagaatct 442  Q
    ||||||||    
T  26780981 tagaatct 26780988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 138 - 392
Target Start/End: Original strand, 16396135 - 16396389
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||| |||||||||| |||||| |||||||||||| ||||| |  ||||||||    
T  16396135 tgttctggaccggccaaaaggatctttggcccatttacttaggcccaatacaatccaaagccaaaacaccacgtttggcaaagttacttgcgacacaccc 16396234  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 337  Q
    ||| | | | |||||||||||| || | |  ||| | ||||||| |||||| |||||||||| | || ||||||||||||||| | | ||||||||||||    
T  16396235 ctttcccacaaggggggtgcacggagcaagcgagactggttcaagcgaaccacaacgtctctctacacgttcccgcaataaacactctggcggttacact 16396334  T
Q  338 tcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagc 392  Q
    ||||| |||||| ||| || ||| || |||||||||| |||||||||||||||||    
T  16396335 tcccatgatttcctaatcgccagagtcaggtgtgccactacaacggctctgcagc 16396389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 250 - 468
Target Start/End: Complemental strand, 3270765 - 3270546
Alignment:
Q  250 gggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacacttcccacgatttc 349  Q
    |||||||||| || | | |||| | |||||||||||||| |||||||||  | || ||||||||||||||||| |  |||||||||||||||||||||||    
T  3270765 gggggtgcacggagcaacagagactggttcaaacgaaccacaacgtctcactacacgttcccgcaataaactctctagcggttacacttcccacgatttc 3270666  T
Q  350 gtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatctttcttcc 449  Q
    ||||||  ||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |||| |||  |    
T  3270665 gtaaccaccagagccaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcacggcagtccccaaggtaggatctatctctc 3270566  T
Q  450 tctc-aaaccctcactctct 468  Q
     ||| |||||||||||||||    
T  3270565 cctctaaaccctcactctct 3270546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 138 - 319
Target Start/End: Original strand, 18284484 - 18284665
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    |||| |||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||   ||||||||    
T  18284484 tgttatggaccggccaaaaggatctttggcccatttaattaggcccaataccatccaaagcccaaacatcacgtttggcaaaattactcacgacacaccc 18284583  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaa 319  Q
    ||||||||||||||| ||||||| || ||||||| | || |||||||||||||||||||| |||  | |||||| |||||||    
T  18284584 cttccacgcgaggggagtgcacaaaatgaaagagactgggtcaaacgaaccccaacgtcttttttaacgttcccacaataaa 18284665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 138 - 442
Target Start/End: Complemental strand, 45313476 - 45313174
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    ||||||||||||||| |||||| ||||| |||||||||||||||||||||| || |||||||||| ||| | ||||||||| |||||| |  ||||||||    
T  45313476 tgttctggaccggccaaaaggaactttgacccatttacttaggcccaatacaattcaaagcccaagcaccatgtttggcaacattacttgcgacacaccc 45313377  T
Q  238 cttccacgcgaggggggtgcacagaacgaa-agaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacac 336  Q
    ||||  |||||| ||| ||||| || |||  | || | |||||||||||||  |||||||||| | || |||||| |||||| ||| | |||||||||||    
T  45313376 cttctccgcgagaggg-tgcacggagcgagcaaagactggttcaaacgaactacaacgtctctctgcacgttccc-caataatctctctggcggttacac 45313279  T
Q  337 ttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggta 436  Q
    |||||||||||||||||||| ||| |   |||||||||||||||||| | |||| ||||| ||||||||| | |||| |||||   ||||||||||||||    
T  45313278 ttcccacgatttcgtaaccgccagagcctggtgtgccattacaacggatttgcaaccctctacctctatata-agggaactcataacagtccccaaggta 45313180  T
Q  437 gaatct 442  Q
    ||||||    
T  45313179 gaatct 45313174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 138 - 466
Target Start/End: Complemental strand, 8082375 - 8082047
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    |||||||||||| || |||||||||| | |||||| ||||||||||||||| ||||||||||||||||| |||||| |||| |||||| |  ||  ||||    
T  8082375 tgttctggaccgtccaaaaggatcttaggcccattcacttaggcccaatacaatccaaagcccaaacaccacgttttgcaacattacttgcgacttaccc 8082276  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagagg-ccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacac 336  Q
    |||   ||||| |||||||||| || | ||  ||| ||||||||||||| ||  ||| ||| ||| || ||||||||||| |  || | |||||||||||    
T  8082275 cttttccgcgaagggggtgcacggagc-aagcaggaccggttcaaacgagccataacatctatttgcacgttcccgcaattatttctctggcggttacac 8082177  T
Q  337 ttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggta 436  Q
    || ||||||||||||||| ||  |    |||||||||||||||| |||||||||| |||||||||||||| |||||||||||   ||||||||||| |||    
T  8082176 tttccacgatttcgtaactgttggacccaggtgtgccattacaatggctctgcagtcctccacctctatatataggggactcttagcagtccccaatgta 8082077  T
Q  437 gaatct-ttcttcctctcaaaccctcactct 466  Q
    ||||||  |||| |||| |||||||||||||    
T  8082076 gaatctactctttctct-aaaccctcactct 8082047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 138 - 439
Target Start/End: Original strand, 9901571 - 9901871
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    ||||||||| ||| | |||||| |||   ||||||||||||||| |||||| ||| ||||| |||| |  ||||||||||| |||||| |  |||||||     
T  9901571 tgttctggatcggtcaaaaggagcttatgcccatttacttaggctcaatacaatcaaaagcgcaaatatcacgtttggcaatattacttgcgacacacct 9901670  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 337  Q
    |||||  || |||||| ||||| || |||   ||  ||||||||| ||||| |||||||||| |  |  |||||||||||| ||| |  ||||||||||     
T  9901671 cttccctgcaaggggg-tgcacggagcgagctagatcggttcaaatgaaccacaacgtctctctggacattcccgcaataatctctctagcggttacacg 9901769  T
Q  338 tcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtag 437  Q
    ||||||||||||||||||||||| |  |||||||||||||||||||||||||| ||||||||||||||| |||||||||||   ||||||| ||||||||    
T  9901770 tcccacgatttcgtaaccgtcagagccaggtgtgccattacaacggctctgcaaccctccacctctatatataggggactcttagcagtcctcaaggtag 9901869  T
Q  438 aa 439  Q
    ||    
T  9901870 aa 9901871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 230 - 440
Target Start/End: Complemental strand, 49402932 - 49402721
Alignment:
Q  230 acacaccccttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttc--catgttcccgcaataaactcacagg 327  Q
    |||||||||||||  ||||||||| |||||||| | |   || |||||||||||| ||  |||||||||| ||  || ||| ||||||||| |||   ||    
T  49402932 acacaccccttccctgcgaggggg-tgcacagagcaagcaagaccggttcaaacggactacaacgtctctctctgcacgtttccgcaataatctctatgg 49402834  T
Q  328 cggttacacttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtc 427  Q
    ||||||||||| ||||||| ||||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||    
T  49402833 cggttacactttccacgatctcgtaaccgccagagcctggtgtgccattacaacggctctgcagccctccacctctatatataggggactcatagcagtc 49402734  T
Q  428 cccaaggtagaat 440  Q
    ||||| |||||||    
T  49402733 cccaaagtagaat 49402721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 138 - 468
Target Start/End: Complemental strand, 28892243 - 28891910
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    ||||||||||||| | |||||||||| |  ||||||| ||||||||||||| ||| ||||  ||||||| ||||||| ||| |||||| |  ||| ||||    
T  28892243 tgttctggaccggtcaaaaggatcttaggtccatttatttaggcccaatacaatctaaagttcaaacaccacgtttgccaacattacttgcgacataccc 28892144  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 337  Q
    ||||  ||||| ||| |||||| || | |   || || ||||||||||||| |||||||||||| || ||| || |||| |  || | || |||||||||    
T  28892143 cttctccgcgaagggagtgcacggagcaagcaagacctgttcaaacgaaccacaacgtctctttgcacgtttccacaattatttctctggtggttacact 28892044  T
Q  338 tcccacgatttcgtaaccgtca----gtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaag 433  Q
    ||||||||||||| ||| | ||    |    || |||||||||||||||||| |||||| ||||||||||||| |||||||||||     ||||||||||    
T  28892043 tcccacgatttcgcaactgccaaccggacccagatgtgccattacaacggctatgcagctctccacctctatatataggggactcttaagagtccccaag 28891944  T
Q  434 gtagaatct-ttcttcctctcaaaccctcactctct 468  Q
    ||||||||| ||||||||||  || |||||||||||    
T  28891943 gtagaatctattcttcctct--aaacctcactctct 28891910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 291 - 442
Target Start/End: Original strand, 34845478 - 34845630
Alignment:
Q  291 aacgtctctttcc-atgttcccgcaataaactcacaggcggttacacttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgc 389  Q
    ||||||||||||| |  |||||||||  | ||||| |||||||||||||||||||||||||||||||||||    | |||||||||||||||| ||||||    
T  34845478 aacgtctctttcccacattcccgcaaatatctcaccggcggttacacttcccacgatttcgtaaccgtcagacacatgtgtgccattacaacgactctgc 34845577  T
Q  390 agccctccacctctataaataggggactcaatgcagtccccaaggtagaatct 442  Q
    |  |  ||||||||||| | ||||| |||   |||||||||||||||||||||    
T  34845578 attcacccacctctatataaagggggctcctcgcagtccccaaggtagaatct 34845630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 404 - 469
Target Start/End: Original strand, 18284661 - 18284725
Alignment:
Q  404 ataaataggggactcaatgcagtccccaaggtagaatctttcttcctctcaaaccctcactctctg 469  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  18284661 ataaataggggactcaatgcagtccccaaggtagaatctctcttcctct-aaaccctcactctctg 18284725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 169 - 299
Target Start/End: Original strand, 26778764 - 26778894
Alignment:
Q  169 catttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccccttccacgcgaggggggtgcacagaacgaaa 268  Q
    ||||||||||||| |||||| || |||||| ||||||| | ||||| ||| |||||| |  || |||||||||  ||||||||||||||||| | ||||     
T  26778764 catttacttaggctcaatactattcaaagctcaaacaccatgtttgacaacattacttgcgacccaccccttctccgcgaggggggtgcacatagcgaac 26778863  T
Q  269 gaggccggttcaaacgaaccccaacgtctct 299  Q
     || |||||||||||||||| ||||||||||    
T  26778864 aagaccggttcaaacgaaccacaacgtctct 26778894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 409 - 469
Target Start/End: Complemental strand, 10422106 - 10422046
Alignment:
Q  409 taggggactcaatgcagtccccaaggtagaatctttcttcctctcaaaccctcactctctg 469  Q
    |||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  10422106 taggggactcaatgcagtccccaaggtagaatatttcttcctcaaaaaccctcactctctg 10422046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 162 - 217
Target Start/End: Complemental strand, 8168062 - 8168007
Alignment:
Q  162 tttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggca 217  Q
    |||| |||||||||||||| ||||||| ||||||||||||||||| | ||||||||    
T  8168062 tttgacccatttacttaggtccaatacaatccaaagcccaaacaccatgtttggca 8168007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 195
Target Start/End: Complemental strand, 15428009 - 15427951
Alignment:
Q  137 ttgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaa 195  Q
    |||||| | ||||| | |||||||||| | |||||||||||||||||||||| ||||||    
T  15428009 ttgttcggaaccggtcaaaaggatcttagacccatttacttaggcccaatacaatccaa 15427951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 195
Target Start/End: Complemental strand, 15434627 - 15434569
Alignment:
Q  137 ttgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaa 195  Q
    |||||| | ||||| | |||||||||| | |||||||||||||||||||||| ||||||    
T  15434627 ttgttcggaaccggtcaaaaggatcttagacccatttacttaggcccaatacaatccaa 15434569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 276 - 442
Target Start/End: Complemental strand, 15455633 - 15455467
Alignment:
Q  276 gttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacacttcccacgatttcgtaaccgtcagtgtaaggtgtgccat 375  Q
    |||||||||| || |||||||||||| || ||| | ||||| |  || |  ||| ||||||||||||  ||||| |||||| ||     ||||||||| |    
T  15455633 gttcaaacgagccacaacgtctctttgcacgtttctgcaattatttctcttgcgtttacacttcccattatttcataaccgccaaacacaggtgtgcctt 15455534  T
Q  376 tacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatct 442  Q
     |||||| || |||| ||||||||||||||| |||   |||||   |||||||||||||||||||||    
T  15455533 cacaacgactttgcatccctccacctctatatatataagactcttagcagtccccaaggtagaatct 15455467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 194
Target Start/End: Complemental strand, 3270828 - 3270771
Alignment:
Q  137 ttgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatcca 194  Q
    ||||| |||||||| | ||||||  |||| |||||||||||||||||||||| |||||    
T  3270828 ttgttttggaccggtcaaaaggacttttggcccatttacttaggcccaatacaatcca 3270771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 248; Significance: 1e-137; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 138 - 469
Target Start/End: Original strand, 20899465 - 20899796
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    ||||||||||| ||| |||||||||||| |||||| ||||| ||||| ||||||||||||||||||||| |||||||| |||||||||||  ||||||||    
T  20899465 tgttctggaccagccaaaaggatctttggcccattcacttaagcccagtaccatccaaagcccaaacaccacgtttggaaaaattactcgcgacacaccc 20899564  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 337  Q
    |||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  20899565 cttccacgcgaggggggtgcacggaacgaaagagactggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcacaggcggttacact 20899664  T
Q  338 tcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtag 437  Q
    ||||||||||||||||||||||| || ||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||| |    
T  20899665 tcccacgatttcgtaaccgtcagagttaggtgtgccattacaacgaatctgcagccctccacctttataaataggggactcaatgcagtccccaaggttg 20899764  T
Q  438 aatctttcttcctctcaaaccctcactctctg 469  Q
    ||||||||||||||| ||||||||||||||||    
T  20899765 aatctttcttcctctaaaaccctcactctctg 20899796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 138 - 469
Target Start/End: Complemental strand, 23495678 - 23495348
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    |||| |||||||| | |||||||||||| ||||||||||||||| ||||| |||||||||||||||||| |||||| |||||||||||||  ||||||||    
T  23495678 tgttttggaccgggcaaaaggatctttgacccatttacttaggctcaatatcatccaaagcccaaacaccacgttttgcaaaattactcgcgacacaccc 23495579  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 337  Q
    ||||||||| |||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  23495578 cttccacgcaaggggg-tgcacggaacgaaagagaccggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcacagacggttacact 23495480  T
Q  338 tcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtag 437  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  23495479 tcccacgatttcgtaaccgtcagagttaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaatgtag 23495380  T
Q  438 aatctttcttcctctcaaaccctcactctctg 469  Q
    ||||| ||||||||| ||||| ||||||||||    
T  23495379 aatctctcttcctctaaaaccttcactctctg 23495348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 137 - 469
Target Start/End: Original strand, 36712518 - 36712849
Alignment:
Q  137 ttgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacacc 236  Q
    ||||||| ||| |||  |||||||||||| ||||||||||||||||||||||  ||||||||| |||||| ||||||||||||||||| ||  |||||||    
T  36712518 ttgttctagactggctaaaaggatctttgacccatttacttaggcccaatacactccaaagcctaaacaccacgtttggcaaaattacccgcgacacacc 36712617  T
Q  237 ccttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacac 336  Q
    |||||||||| |||||| ||||| ||||||||||| |  ||||||||||||||||||||||||||||| |||| ||||||||| || |||| ||||||||    
T  36712618 ccttccacgctaggggg-tgcacggaacgaaagagactagttcaaacgaaccccaacgtctctttccacgttctcgcaataaaatcgcaggtggttacac 36712716  T
Q  337 ttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggta 436  Q
    || ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36712717 tttccacgatttcgtaaccgtcagagttaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggta 36712816  T
Q  437 gaatctttcttcctctcaaaccctcactctctg 469  Q
    |||||||||||||||||||||||||||||||||    
T  36712817 gaatctttcttcctctcaaaccctcactctctg 36712849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 191 - 469
Target Start/End: Original strand, 5590619 - 5590897
Alignment:
Q  191 tccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccccttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaacccc 290  Q
    |||||||||||||||| ||||||||||||||||||||  ||| ||||||| ||||||||| |||||||||||||||||||| | ||||||||||||||||    
T  5590619 tccaaagcccaaacaccacgtttggcaaaattactcgcgacagacccctttcacgcgaggagggtgcacagaacgaaagagactggttcaaacgaacccc 5590718  T
Q  291 aacgtctctttccatgttcccgcaataaactcacaggcggttacacttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgca 390  Q
    ||||||||||||||  |||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||     
T  5590719 aacgtctctttccacattcccgcaataaactcgcaggcggttacacttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgct 5590818  T
Q  391 gccctccacctctataaataggggactcaatgcagtccccaaggtagaatctttcttcctctcaaaccctcactctctg 469  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  5590819 gccctccacctctataaataggggattcaatgcagtccccaaggtagaatctttcttcctctcaaacccttactctctg 5590897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 143 - 462
Target Start/End: Original strand, 33622365 - 33622686
Alignment:
Q  143 tggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccccttcc 242  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||| ||||||||||||||||  | ||||||||||||||||||  |||||||||||||    
T  33622365 tggaccggccaaaaggatctttgacccatttacttaagcccaatacaatccaaagcccaaacatcatgtttggcaaaattactcgcgacacaccccttcc 33622464  T
Q  243 acgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacacttccca 342  Q
    ||| ||||||| ||||||||||||||||| | |||| ||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||    
T  33622465 acgtgaggggg-tgcacagaacgaaagagactggtttaaacgaaccccaacgtctctttctacgttccagcaataaactcacaggcggttacacttccca 33622563  T
Q  343 cgatttcgtaacc---gtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaa 439  Q
     ||||||||||||   ||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  33622564 ggatttcgtaaccaccgtcagagtaaggtgtgtaattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccctaagatagaa 33622663  T
Q  440 tctttcttcctctcaaaccctca 462  Q
    | |||||||||||||||||||||    
T  33622664 tatttcttcctctcaaaccctca 33622686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 138 - 468
Target Start/End: Complemental strand, 5931521 - 5931190
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    |||| ||||| |||| |||| | ||||| |||||||||||||||||||||| ||||| | ||||||||   ||||||||||||||||| || ||||||||    
T  5931521 tgttatggactggccaaaagtacctttggcccatttacttaggcccaatacaatccacaacccaaacatcgcgtttggcaaaattacttgtgacacaccc 5931422  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 337  Q
    ||||||| | |||||||||||| || ||| |||| | |||||||||||||| |||||||||| | ||  |||||||||||||||| | ||||||| ||||    
T  5931421 cttccacacaaggggggtgcacggagcgatagagactggttcaaacgaaccacaacgtctctctacacattcccgcaataaactctctggcggttgcact 5931322  T
Q  338 tcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtag 437  Q
    |||||||||||| |||||| |||    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||| |||    
T  5931321 tcccacgatttcataaccgccagaaccaggtgtgtcattacaacggctctgcagccctccacctctataaataggggactcacgacagtccccaagatag 5931222  T
Q  438 aatctttcttcctctc-aaaccctcactctct 468  Q
    ||||| |||  | ||| |||||||||||||||    
T  5931221 aatctatctctccctctaaaccctcactctct 5931190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 138 - 469
Target Start/End: Original strand, 28067893 - 28068224
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaa-gcccaaacacaacgtttggcaaaattactcgtaacacacc 236  Q
    ||||||||||||||| |||||||||||| |||| ||||||| ||||||||| ||||||| || ||| ||| |||||||||||| ||||| | |||||  |    
T  28067893 tgttctggaccggccaaaaggatctttgacccacttacttacgcccaatacaatccaaaagcacaagcaccacgtttggcaaacttacttgcaacacctc 28067992  T
Q  237 ccttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacac 336  Q
    | || | ||| |||||| ||||| || |||  ||| | ||||||||||| || |||||||||| | || ||||| ||||||||||| | |||||||||||    
T  28067993 cttttc-cgcaaggggg-tgcacggagcgagcgagactggttcaaacgagcctcaacgtctctctgcacgttcctgcaataaactctccggcggttacac 28068090  T
Q  337 ttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggta 436  Q
    |||||||||||||||||||| ||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||    
T  28068091 ttcccacgatttcgtaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcatagcagtccctaaggta 28068190  T
Q  437 gaa--tctttcttcctctcaaaccctcactctctg 469  Q
    |||  ||| ||||||||| ||||||||||||||||    
T  28068191 gaatctctctcttcctct-aaaccctcactctctg 28068224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 138 - 353
Target Start/End: Complemental strand, 22510312 - 22510097
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||||  |  ||||  ||||||| |||||||  |||||||| ||  ||||||||    
T  22510312 tgttctggaccggccaaaaggatctttggcccatttacttaggcccaatacactataaagttcaaacaccacgtttgataaaattacccgcgacacaccc 22510213  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 337  Q
    ||||||||||||| |||||||| ||||||||||| | |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22510212 cttccacgcgaggtgggtgcacggaacgaaagagactggttaaaacgaactccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 22510113  T
Q  338 tcccacgatttcgtaa 353  Q
    ||||||||||||||||    
T  22510112 tcccacgatttcgtaa 22510097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 138 - 338
Target Start/End: Complemental strand, 13538060 - 13537860
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    ||||||||||||  | |||| || ||||  ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||  ||||||||    
T  13538060 tgttctggaccgatcaaaagaatatttggtccatttacttaggcccaataccatccaaagcccaaacatcacgtttggcaaaattactcgcgacacaccc 13537961  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 337  Q
    ||||||||||||||||||| || ||||||||||| | |||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  13537960 cttccacgcgaggggggtgtacggaacgaaagagactggttcaaatgaaccccaacgtctctttccacgttcccgcaataaactcacagccggttacact 13537861  T
Q  338 t 338  Q
    |    
T  13537860 t 13537860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 154 - 442
Target Start/End: Original strand, 15620077 - 15620364
Alignment:
Q  154 aaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccccttccacgcgaggggg 253  Q
    ||||||| |||| || ||||| | ||||| ||||| |||||||| |||||| | ||||||| |||| ||||| | ||| ||||||||||  || ||||||    
T  15620077 aaaggatatttggcctatttattcaggcctaatacaatccaaagtccaaacgccacgtttgacaaacttacttgcaacgcaccccttccttgcaaggggg 15620176  T
Q  254 gtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacacttcccacgatttcgtaa 353  Q
     || || || |||  ||| | ||||||||||| || |||||||||| | || |||||| |||||||||| | |||||||||||||||||| |||||||||    
T  15620177 -tgtacggagcgagcgagacgggttcaaacgagccacaacgtctctctgcacgttcccacaataaactctctggcggttacacttcccacaatttcgtaa 15620275  T
Q  354 ccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatct 442  Q
    ||||||| |  | ||||||||||||||| ||||| ||||||| |||||||||||||||||||||||  |||||||||||||||||||||    
T  15620276 ccgtcagagccaagtgtgccattacaacagctctacagcccttcacctctataaataggggactcatagcagtccccaaggtagaatct 15620364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 177 - 468
Target Start/End: Complemental strand, 42792772 - 42792481
Alignment:
Q  177 taggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccccttccacgcgaggggggtgcacagaacgaaagaggccgg 276  Q
    ||||||||||| || ||||||||||||| | ||||||| | | |||||| | ||||| ||| || |  || ||||||||||||||| | |  ||| ||||    
T  42792772 taggcccaatatcaaccaaagcccaaactccacgtttgacgatattacttgcaacaccccctttact-gcaaggggggtgcacagagcaagcgagaccgg 42792674  T
Q  277 ttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacacttcccacgatttcgtaaccgtcagtgtaaggtgtgccatt 376  Q
    |||||||||  | |||||| ||| | || ||||||||||||||||| |  |||||||||||||||||||||||||||||| ||| |  |||||||||| |    
T  42792673 ttcaaacgagtcacaacgtatctctgcacgttcccgcaataaactctctagcggttacacttcccacgatttcgtaaccgccagagccaggtgtgccact 42792574  T
Q  377 acaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatctttcttcctctc-aaaccctcactctct 468  Q
    ||||| ||||||||||||||||||||||||| |||||||||||   || ||||||||||||||||| ||| |||||| ||||||||| |||||    
T  42792573 acaactgctctgcagccctccacctctataactaggggactcataacaatccccaaggtagaatctatctccctctctaaaccctcattctct 42792481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 138 - 468
Target Start/End: Complemental strand, 8244846 - 8244511
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    ||||||||||||||| ||||||  |||  |||||||||||||||  ||||| |||||||| | ||||||  | ||||||  | ||||| | |||||||||    
T  8244846 tgttctggaccggccaaaaggaattttagcccatttacttaggcttaatacaatccaaagtctaaacaccgcatttggctgagttacttgcaacacaccc 8244747  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 337  Q
    ||||||||| |||||| ||||| || |||||||| | |||||||||||||| |||||||||||| || |||||| |||||||||| |  ||| |||||||    
T  8244746 cttccacgcaaggggg-tgcacggagcgaaagagactggttcaaacgaaccacaacgtctctttgcacgttcccccaataaactctctagcgattacact 8244648  T
Q  338 tcccacgatttcgtaaccgtcag-----tgtaa-ggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcccca 431  Q
    | ||||||||||||||||| |||     ||||| | |||||||| || ||| ||||||||||||||||||||||||||| ||||||||   |||||| ||    
T  8244647 ttccacgatttcgtaaccgccagagccatgtaatgatgtgccatcac-acgactctgcagccctccacctctataaataagggactcacatcagtcctca 8244549  T
Q  432 aggtagaatc--tttcttcctctcaaaccctcactctct 468  Q
    ||||||||||  | ||||||||  |||||||||||||||    
T  8244548 aggtagaatctatctcttcctc-aaaaccctcactctct 8244511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 138 - 469
Target Start/End: Complemental strand, 38608608 - 38608266
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaa--ttactcgtaacacac 235  Q
    ||||||||||||||| |||||| ||||| | ||||||||||||  |||||| || |||||  ||||| | | ||||||| |||  |||||||    ||||    
T  38608608 tgttctggaccggccaaaaggacctttgactcatttacttaggttcaatacaattcaaagttcaaactccatgtttggctaaactttactcgcggtacac 38608509  T
Q  236 cccttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccat---------gttcccgcaataaactcacag 326  Q
    ||| || ||||||||||| |||||  | | ||  || |||||||||||||||  | |||||||||| |||         |||||||||||||||||   |    
T  38608508 cccctctacgcgaggggg-tgcacgaatcaaataagaccggttcaaacgaactacgacgtctctttgcatattctgcacgttcccgcaataaactctttg 38608410  T
Q  327 gcggttacacttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagt 426  Q
    |||||||||||||||||||||||||||||| ||| |  |||||||||   |||||||||||| || ||||||||||||||||||||||||||||||||||    
T  38608409 gcggttacacttcccacgatttcgtaaccgccagagccaggtgtgcctccacaacggctctgtagacctccacctctataaataggggactcaatgcagt 38608310  T
Q  427 ccccaaggtagaatc-tttcttcctctcaaaccctcactctctg 469  Q
    ||| ||||||||||| ||||| ||||| ||||||||||||||||    
T  38608309 ccctaaggtagaatcttttctccctctaaaaccctcactctctg 38608266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 148 - 469
Target Start/End: Original strand, 41037524 - 41037855
Alignment:
Q  148 cggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccccttccacgcg 247  Q
    ||||| |||||| || || ||||||||||||| | |||||| ||||||||||||||||| ||| |||||||| ||||| | |||||||| ||| |  ||     
T  41037524 cggccaaaaggacctatgacccatttacttagactcaatacaatccaaagcccaaacactacggttggcaaacttacttgcaacacaccactttccggca 41037623  T
Q  248 aggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacacttcccacgatt 347  Q
    ||||||||||||  | | |  ||| | |||||||| ||||   ||| ||| | | || |||| |||||||||||| | ||||||||||||||||||||||    
T  41037624 aggggggtgcacgaagcaagcgagactggttcaaatgaacgataacatctgtctgcacgttcacgcaataaactctctggcggttacacttcccacgatt 41037723  T
Q  348 tcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacc---------tctataaataggggactcaatgcagtccccaaggtaga 438  Q
    ||||||||| ||| |  |||||||||||||||||||||| |||||||||||||         |||||||||||||||||||  |||||||||||||||||    
T  41037724 tcgtaaccgccagagccaggtgtgccattacaacggctccgcagccctccacctctataaattctataaataggggactcatagcagtccccaaggtaga 41037823  T
Q  439 --atctttcttcctctcaaaccctcactctctg 469  Q
      || | ||||||||| ||||||||||||||||    
T  41037824 atatatctcttcctct-aaaccctcactctctg 41037855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 161 - 397
Target Start/End: Original strand, 19329816 - 19330052
Alignment:
Q  161 ctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccccttccacgcgaggggggtgcaca 260  Q
    ||||| |||||||||||||||||||||| || ||||||||||| || ||||||||||| |||||| |  | ||| |||||||  |||||||||||||||     
T  19329816 ctttggcccatttacttaggcccaatacaattcaaagcccaaataccacgtttggcaacattacttgcgagacatcccttccctgcgaggggggtgcacg 19329915  T
Q  261 gaacgaaag--aggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacacttcccacgatttcgtaaccgtc 358  Q
    ||  |||||  || ||||||||||||| || ||||||  || | |||||||||||||||| ||| | ||||||||||||||||||||||||||||||| |    
T  19329916 ga--gaaagcaagaccggttcaaacgagccacaacgttactctgcatgttcccgcaataatctctctggcggttacacttcccacgatttcgtaaccgcc 19330013  T
Q  359 agtgtaaggtgtgccattacaacggctctgcagccctcc 397  Q
    || |   ||||||||||||||| ||||||| ||||||||    
T  19330014 agagcttggtgtgccattacaatggctctgtagccctcc 19330052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 276 - 469
Target Start/End: Original strand, 22922645 - 22922839
Alignment:
Q  276 gttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacacttcccacgatttcgtaaccgtcagtgtaaggtgtgccat 375  Q
    ||||||||||||| |||| ||||| |  ||||| | ||||||||||| | |||||||||||||||||||||||||||||||  || |  ||||||| ||     
T  22922645 gttcaaacgaaccacaacctctctctgtatgtttcagcaataaactctctggcggttacacttcccacgatttcgtaaccgctagagccaggtgtgtcac 22922744  T
Q  376 tacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatc--tttcttcctctcaaaccctcactctctg 469  Q
    ||||||||||||| ||||||||||||||||||||||||||||||   || ||||||||||||||||  | ||||||||| ||||||||||||||||    
T  22922745 tacaacggctctgtagccctccacctctataaataggggactcataacaatccccaaggtagaatctatctcttcctct-aaaccctcactctctg 22922839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 138 - 318
Target Start/End: Complemental strand, 24095523 - 24095343
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    ||||||||||||||| ||||||  |||| ||||| |||||||||||||||| |||||||||||||| || |||||||||||  ||||| |   |||||||    
T  24095523 tgttctggaccggccaaaaggagttttggcccatctacttaggcccaatacaatccaaagcccaaataccacgtttggcaacgttacttgcggcacaccc 24095424  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataa 318  Q
    | ||| |||||||||| ||||| || | |  ||| ||||||||||| ||||||||||||||||| || |||||||||||||    
T  24095423 cgtccgcgcgagggggatgcacggagcaagcgagaccggttcaaacaaaccccaacgtctctttgcacgttcccgcaataa 24095343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 278 - 469
Target Start/End: Original strand, 22922050 - 22922242
Alignment:
Q  278 tcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacacttcccacgatttcgtaaccgtcagtgtaaggtgtgccatta 377  Q
    ||||||||||| |||||||||| |  | ||| | | ||||||||  | ||||||||||||||||||||||| ||||||  ||| |  ||||||| || ||    
T  22922050 tcaaacgaaccacaacgtctctctgtacgtttcaggaataaactttctggcggttacacttcccacgattttgtaaccaccagagccaggtgtgtcacta 22922149  T
Q  378 caacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatc--tttcttcctctcaaaccctcactctctg 469  Q
    ||||||||||| ||||||||||||||||||||||||||||||   |||| ||||||||||||||  | ||||||||| ||||||||||||||||    
T  22922150 caacggctctgtagccctccacctctataaataggggactcataacagttcccaaggtagaatctatctcttcctct-aaaccctcactctctg 22922242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 31022310 - 31022351
Alignment:
Q  218 aaattactcgtaacacaccccttccacgcgaggggggtgcac 259  Q
    |||||||||| |||||||||||||| ||||||||||||||||    
T  31022310 aaattactcgcaacacaccccttccccgcgaggggggtgcac 31022351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 140 - 182
Target Start/End: Original strand, 5589312 - 5589354
Alignment:
Q  140 ttctggaccggccgaaaggatctttgtcccatttacttaggcc 182  Q
    ||||||||||| | |||||||||||| ||||||||||||||||    
T  5589312 ttctggaccggtcaaaaggatctttggcccatttacttaggcc 5589354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 440
Target Start/End: Original strand, 23927179 - 23927252
Alignment:
Q  367 gtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaat 440  Q
    ||||||||||||||||||||||||  |  |||||| |||||||||| | |||  ||||| | ||||||||||||    
T  23927179 gtgtgccattacaacggctctgcattcacccacctttataaataggaggctccctgcagcctccaaggtagaat 23927252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 244; Significance: 1e-135; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 135 - 466
Target Start/End: Complemental strand, 18153462 - 18153131
Alignment:
Q  135 tattgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacaca 234  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||  | |||||||||||||| | ||||||||||||||||||  |||||    
T  18153462 tattgttctggaccggccaaaaggatctttggcccatttacttaggcccaatacactacaaagcccaaacaccatgtttggcaaaattactcgcgacaca 18153363  T
Q  235 ccccttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttac 334  Q
    ||||||||||||||||||||||||| |||| |||||| | |||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||    
T  18153362 ccccttccacgcgaggggggtgcacggaacaaaagagactggttcaaacgaaccccaacgtctctttccacgttcccacaataaactcgcaggcggttac 18153263  T
Q  335 acttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaagg 434  Q
    ||||||||| |||||||||||||||| ||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  18153262 acttcccaccatttcgtaaccgtcagagtaagctgtgccattacaacgactcggcagccctccacctctataaataggggactcaatgcattccccaagg 18153163  T
Q  435 tagaatctttcttcctctcaaaccctcactct 466  Q
    ||||||||||||||||||||||||||||||||    
T  18153162 tagaatctttcttcctctcaaaccctcactct 18153131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 137 - 469
Target Start/End: Original strand, 21592743 - 21593077
Alignment:
Q  137 ttgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacacc 236  Q
    |||||||||||||||| |||| ||||||| |||||| |||||||||||||||||||||||| |||||||| | ||||||| ||||||||||  |||||||    
T  21592743 ttgttctggaccggccaaaagaatctttggcccattcacttaggcccaataccatccaaagtccaaacaccatgtttggctaaattactcgcgacacacc 21592842  T
Q  237 ccttccacgcgagggg--ggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttac 334  Q
    ||||||||||||||||  ||||||| ||||||||||| | |||||||||||||||||||||||||||||| ||||||| ||||| || |||| |||||||    
T  21592843 ccttccacgcgaggggggggtgcacggaacgaaagagactggttcaaacgaaccccaacgtctctttccacgttcccgtaataagctaacagacggttac 21592942  T
Q  335 acttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaagg 434  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  21592943 acttcccacgattttgtaaccgtcagagtaaggtgtgccattacaacggctcagcagccctccacctctataaataggggactcaatgcagtccccaagg 21593042  T
Q  435 tagaatctttcttcctctcaaaccctcactctctg 469  Q
    ||||| |||||||||||| ||||||||||||||||    
T  21593043 tagaagctttcttcctctaaaaccctcactctctg 21593077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 154 - 469
Target Start/End: Original strand, 47295567 - 47295881
Alignment:
Q  154 aaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccccttccacgcgaggggg 253  Q
    |||||||||||| |||||||||||||| |||||||  | |||||||||||||| |||||||| |||||||||||  |||||||| |||||||||||||||    
T  47295567 aaaggatctttgacccatttacttaggtccaatacactacaaagcccaaacaccacgtttggaaaaattactcgcgacacacccattccacgcgaggggg 47295666  T
Q  254 gtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacacttcccacgatttcgtaa 353  Q
     ||||| ||||||| ||| | ||||||||||||||||||||||||| ||||  ||||||||||||||||||| ||| |||||||||||||||||||||||    
T  47295667 -tgcacggaacgaaggagactggttcaaacgaaccccaacgtctctctccaccttcccgcaataaactcacaagcgtttacacttcccacgatttcgtaa 47295765  T
Q  354 ccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatctttcttcctctc 453  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47295766 ccgtcagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatctttcttcctctc 47295865  T
Q  454 aaaccctcactctctg 469  Q
    ||||||||||||||||    
T  47295866 aaaccctcactctctg 47295881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 262 - 469
Target Start/End: Complemental strand, 18185831 - 18185624
Alignment:
Q  262 aacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacacttcccacgatttcgtaaccgtcagt 361  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||     
T  18185831 aacgaaagagactggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcgcaagcggttacacttcccgcgatttcgtaaccgtcaga 18185732  T
Q  362 gtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatctttcttcctctcaaaccctc 461  Q
    |||||||||||| ||| ||||||||||||||||||||| | ||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  18185731 gtaaggtgtgccgttaaaacggctctgcagccctccacatttattaataggggactcaatgcagtccccagcgtagaatctttcttcctctcaaaccctc 18185632  T
Q  462 actctctg 469  Q
    ||||||||    
T  18185631 actctctg 18185624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 137 - 466
Target Start/End: Original strand, 30770056 - 30770384
Alignment:
Q  137 ttgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacacc 236  Q
    |||||||||||||||| |||||| |||||  ||||||||||||||||||||| || |||||||||||||  ||||||| | || ||||| |  |||||||    
T  30770056 ttgttctggaccggccaaaaggacctttgaaccatttacttaggcccaatacaattcaaagcccaaacatcacgtttgacgaagttacttgcgacacacc 30770155  T
Q  237 ccttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacac 336  Q
    |||||||| | |||||| ||||| || |||||| | | ||||||||||||| | ||||||||| | || |||||||||||||||||   ||| |||||||    
T  30770156 ccttccacacaaggggg-tgcacggagcgaaagggactggttcaaacgaacac-aacgtctctctacacgttcccgcaataaactctttggcagttacac 30770253  T
Q  337 ttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggta 436  Q
    || ||||||||||||||||| ||| |  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||    
T  30770254 tttccacgatttcgtaaccgccagagccaggtgtgccattacaacggctctgcagcactccacctctataaataggggactcacagcagtccccaaggta 30770353  T
Q  437 gaatc--tttcttcctctcaaaccctcactct 466  Q
    |||||  | ||||||||| |||||||||||||    
T  30770354 gaatctatctcttcctct-aaaccctcactct 30770384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 138 - 469
Target Start/End: Complemental strand, 29165178 - 29164848
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    ||||||||||||||| ||| ||  |||| |||||||| ||||||||||||| | ||||||||||||||| |||||||||||| ||||| || ||||||||    
T  29165178 tgttctggaccggcc-aaacgacatttgacccatttatttaggcccaatacaacccaaagcccaaacaccacgtttggcaaagttacttgtgacacaccc 29165080  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 337  Q
    ||| | | | |||||| ||||| || |||| ||| | |||||||||||||| |||||||||| | || ||||||||||||||||| |  || ||||||||    
T  29165079 ctttcccacaaggggg-tgcacggagcgaacgagactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctctagcagttacact 29164981  T
Q  338 tcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtag 437  Q
    |||||||||||||||||    || || ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||    
T  29164980 tcccacgatttcgtaacttctagagtcaggtgtgtcattacaacggctctgcagccgtccacctctataaataggggactcatagcagtccccaaggtag 29164881  T
Q  438 aatc--tttcttcctctcaaaccctcactctctg 469  Q
    ||||  | ||||||||| ||||||||||||||||    
T  29164880 aatctatctcttcctct-aaaccctcactctctg 29164848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 138 - 439
Target Start/End: Complemental strand, 20093866 - 20093566
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    ||||||| | ||||| |||||||||||| |||||||||||||| ||||||| |||||||| |||||||| ||||||| |||| ||||| | |||| ||||    
T  20093866 tgttctgaatcggccaaaaggatctttgacccatttacttaggtccaatacaatccaaagtccaaacaccacgtttgtcaaagttacttgcaacaaaccc 20093767  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 337  Q
    ||||||| | || ||| ||||| || ||| |||| | |||||||||||||| |||||||||| | ||  |||||||||||| |||   || |||||||||    
T  20093766 cttccacacaagaggg-tgcacggagcgacagagactggttcaaacgaaccacaacgtctctctgcacattcccgcaataagctctttggtggttacact 20093668  T
Q  338 tcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtag 437  Q
    |||||||||||||||||||  || |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  20093667 tcccacgatttcgtaaccgctagggccaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcacggcagtccccaaggtag 20093568  T
Q  438 aa 439  Q
    ||    
T  20093567 aa 20093566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 169 - 468
Target Start/End: Complemental strand, 21802750 - 21802450
Alignment:
Q  169 catttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccccttccacgcgaggggggtgcacagaacgaaa 268  Q
    |||||||||||||| ||||| ||| ||||| ||||||| ||||||| |||| |||||   ||||||| |||||||||| |||||||||||| || ||||     
T  21802750 catttacttaggccgaatacaatctaaagctcaaacaccacgtttgtcaaagttactttcaacacacgccttccacgcaaggggggtgcacggagcgaag 21802651  T
Q  269 gaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacacttcccacgatttcgtaaccgtcagtgtaaggt 368  Q
    ||| | |||||| ||||||| |||||||||| | || |||| |||||||||||| |  || ||||||||||| ||||||||||||||  ||| |  ||||    
T  21802650 gagactggttcagacgaaccacaacgtctctctgcaggttctcgcaataaactctctcgctgttacacttcctacgatttcgtaaccaccagagccaggt 21802551  T
Q  369 gtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatc--tttcttcctctcaaaccctcactct 466  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||||  ||||||||||||||||||||  | ||||||||| |||||||||||||    
T  21802550 gtgccattacaacggctctgtagccctcaacctctataaataggggactcacagcagtccccaaggtagaatctatctcttcctct-aaaccctcactct 21802452  T
Q  467 ct 468  Q
    ||    
T  21802451 ct 21802450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 136 - 415
Target Start/End: Complemental strand, 7595686 - 7595403
Alignment:
Q  136 attgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacac 235  Q
    |||||| |||||||| | |||||||||||| |||||||||| ||||||||||| || ||||||  |||||| ||| |||||||| ||||| | |||||||    
T  7595686 attgttttggaccggtcaaaaggatctttggcccatttactcaggcccaatacaattcaaagcttaaacaccacgcttggcaaacttacttgcaacacac 7595587  T
Q  236 cccttccacgc----gaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggt 331  Q
    ||||||| | |    | ||||||||||| || |||  ||| |||||||||||||||| ||| |||||| | || ||||||||||||||||| | ||||||    
T  7595586 cccttccccacaggaggggggggtgcacggagcgagcgagaccggttcaaacgaaccacaatgtctctctgcacgttcccgcaataaactctctggcggt 7595487  T
Q  332 tacacttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaatagggga 415  Q
    |||||||||||||||||||||||   ||| |  |||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  7595486 tacacttcccacgatttcgtaacatccagcgccaggtgtgctattacaacggctttgcagccctccacctctataaatagggga 7595403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 134 - 419
Target Start/End: Complemental strand, 22705933 - 22705649
Alignment:
Q  134 ttattgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacac 233  Q
    |||||||||| |||||| | ||||||  |||| |||||||||||||||||||||| |||||||| |||| ||| ||||||| |||| ||||| | |||||    
T  22705933 ttattgttctagaccggtcaaaaggacatttgacccatttacttaggcccaatacaatccaaagtccaa-caccacgtttgacaaagttacttgcaacac 22705835  T
Q  234 accccttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggtta 333  Q
    |||||||||| || ||| |||||||| || |||||||| |  ||||||||||||| |||||| ||| | || ||||| |||||||| || |   ||||||    
T  22705834 accccttccatgcaaggcgggtgcacggagcgaaagagactagttcaaacgaaccacaacgtttctctgcacgttcctgcaataaattctctaccggtta 22705735  T
Q  334 cacttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactca 419  Q
    ||||||||| ||||||||||||| ||| |  |||||||||||||||| |||||||||| |||||||||||||||||| ||||||||    
T  22705734 cacttcccatgatttcgtaaccgccagagccaggtgtgccattacaatggctctgcagtcctccacctctataaatacgggactca 22705649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 138 - 469
Target Start/End: Original strand, 2249860 - 2250193
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    |||||||||||  || |||||| ||||| || |||||||||  |||||||| || |||||| |||| || ||||||||||| |||||| |  ||||||||    
T  2249860 tgttctggaccaaccaaaaggagctttgacctatttacttattcccaatacaattcaaagctcaaataccacgtttggcaacattacttgcgacacaccc 2249959  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 337  Q
    ||||| ||| |||||||||||| || | |   || | |||||||||||||| |||||||||| | || |||||||||||||  || |  ||||||||| |    
T  2249960 cttccccgcaaggggggtgcacggagcaagcaagactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataatatctctagcggttacaat 2250059  T
Q  338 tcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtag 437  Q
    ||||||||||| ||||||| ||  |   ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||  |||  |||||| ||||    
T  2250060 tcccacgattttgtaaccgccaaagcctggtgtgccattacaacggctctgcaaccctccacctctatatataggggactcatagcaaaccccaatgtag 2250159  T
Q  438 aatc--tttcttcctctcaaaccctcactctctg 469  Q
    ||||  | ||||||||| |||| |||||||||||    
T  2250160 aatctatctcttcctctaaaactctcactctctg 2250193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 138 - 468
Target Start/End: Original strand, 9548828 - 9549168
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    ||||||||||||||| ||||||| |||| ||||||||| ||| |||||||| ||||||||||||||| | |||||||| | | ||||| |  ||||||||    
T  9548828 tgttctggaccggccaaaaggatgtttggcccatttacgtagtcccaatacaatccaaagcccaaacgccacgtttggtatagttacttgcgacacaccc 9548927  T
Q  238 ctt---ccac------gcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggc 328  Q
    |||   ||||      | | |||||| |||  || | |  ||| | |||||||||||| | |||||||||| | || ||||||||||||||||| | |||    
T  9548928 ctttacccacaaggggggggggggggggcatggagcaagcgagactggttcaaacgaaacacaacgtctctctgcacgttcccgcaataaactctctggc 9549027  T
Q  329 ggttacacttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcc 428  Q
    ||||||||||||||||||||||||||||  || |  |||||||||  |||||||||||||||||||||||||| |||||| ||||||||||| | |||||    
T  9549028 ggttacacttcccacgatttcgtaaccgctagagccaggtgtgcctctacaacggctctgcagccctccacctttataaaaaggggactcaaagtagtcc 9549127  T
Q  429 ccaaggtagaatc--tttcttcctctcaaaccctcactctct 468  Q
    |||||||| ||||  | ||||||||| |||||||||||||||    
T  9549128 ccaaggtaaaatctatctcttcctct-aaaccctcactctct 9549168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 138 - 406
Target Start/End: Complemental strand, 38612888 - 38612620
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    |||||||||| || | |||||| ||||| ||||||||||||||| |||||| || |||||||||||||| ||||||||||| |||||| | || ||||||    
T  38612888 tgttctggactggtcaaaaggagctttgacccatttacttaggctcaatactattcaaagcccaaacaccacgtttggcaacattacttgcaaaacaccc 38612789  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 337  Q
    ||||| |||||||||| ||||| || | |    |||||||||||||||||| ||||||| || | || |||||| |||||| ||| | ||| ||||||||    
T  38612788 cttcctcgcgagggggttgcacggagcaagcagggccggttcaaacgaaccacaacgtccctctgcacgttcccacaataatctctctggcagttacact 38612689  T
Q  338 tcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctata 406  Q
    ||||||||||| ||||||| ||| |   ||||| ||||||||||||||||||||  |||||||||||||    
T  38612688 tcccacgattttgtaaccgccagagcctggtgtaccattacaacggctctgcagatctccacctctata 38612620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 365 - 468
Target Start/End: Complemental strand, 22704000 - 22703896
Alignment:
Q  365 aggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatctttct--tcctctcaaaccctca 462  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||| |||  |||||| |||||||||    
T  22704000 aggtgtgccattacaacggctctgcagccctccacctctataaatatgggactcacagcagtccccaaggtagaatctatctcgtcctct-aaaccctca 22703902  T
Q  463 ctctct 468  Q
    ||||||    
T  22703901 ctctct 22703896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 135 - 403
Target Start/End: Original strand, 30764846 - 30765114
Alignment:
Q  135 tattgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacaca 234  Q
    |||||||||||| ||||| |||||   || |  ||||||||||||| ||||||| |||| ||||  |||| | |||||||||||| ||||| |  ||| |    
T  30764846 tattgttctggatcggccaaaagggctttaggtccatttacttaggtccaatacaatcccaagcttaaactccacgtttggcaaatttacttgcgacata 30764945  T
Q  235 ccccttccacgcgaggggggtgcacagaacgaaagaggcc-ggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggtta 333  Q
    |||||||  ||||||||| ||||||||| | ||  ||| | ||||||| |||||| ||| |||||||| ||  |||||||||| |  || | ||||||||    
T  30764946 ccccttcaccgcgaggggagtgcacagagc-aagcaggactggttcaagcgaaccacaatgtctctttgcacattcccgcaattatttctctggcggtta 30765044  T
Q  334 cacttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctct 403  Q
    ||||||||||||||||||| ||||| |    |||||||||| |||||| |||||||||||||||||||||    
T  30765045 cacttcccacgatttcgtacccgtcggacctaggtgtgccactacaacagctctgcagccctccacctct 30765114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 138 - 282
Target Start/End: Original strand, 40635506 - 40635648
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    |||||||||| || | |||||||||||| |||||| |||||| ||||||| ||||||||| | |||||| ||||||||||||||||||||  ||| |||     
T  40635506 tgttctggactggtcaaaaggatctttg-cccattcacttagacccaatatcatccaaagtc-aaacaccacgtttggcaaaattactcgcgacaaacct 40635603  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaa 282  Q
    |||||| ||||| ||||||||| ||||||||||| ||||||||||    
T  40635604 cttccatgcgagaggggtgcacggaacgaaagagaccggttcaaa 40635648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 140 - 335
Target Start/End: Original strand, 21801716 - 21801911
Alignment:
Q  140 ttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacacccct 239  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||| ||| ||| ||||||||| |||||||| ||| ||||| | ||||||| |||    
T  21801716 ttctggaccggccaaaaggatctttggcccatttacttaggcccaatactatctaaaacccaaacaccacgtttggaaaacttacttgcaacacactcct 21801815  T
Q  240 tccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttaca 335  Q
      |  || ||||||||| |  || |||   || ||| |||||||||||| |||||||||| | || |||||||||||||  || | ||||||||||    
T  21801816 ctcctgcaaggggggtgtaaggagcgagcaagaccgattcaaacgaaccacaacgtctctctgcacgttcccgcaataagttctctggcggttaca 21801911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 326 - 469
Target Start/End: Original strand, 28794084 - 28794227
Alignment:
Q  326 ggcggttacacttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcag 425  Q
    |||||||||||||||||||||||||||||||||||    | ||||||||||||||||||| |||||||   ||||| |||| |||||||||||    |||    
T  28794084 ggcggttacacttcccacgatttcgtaaccgtcagacacacgtgtgccattacaacggctatgcagccactcacctttatatataggggactcttaacag 28794183  T
Q  426 tccccaaggtagaatct-ttcttcctctcaaaccctcactctctg 469  Q
    ||||||||||||||||| |||| ||||| ||||||||| ||||||    
T  28794184 tccccaaggtagaatctattctccctct-aaaccctcattctctg 28794227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 320 - 412
Target Start/End: Original strand, 5632684 - 5632775
Alignment:
Q  320 ctcacaggcggttacacttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaatagg 412  Q
    ||||| ||||||||||||||  ||||||||||||||||||||   | ||||||| ||||||||||||||||  |  || ||||||||||||||    
T  5632684 ctcactggcggttacacttcttacgatttcgtaaccgtcagtcacatgtgtgcc-ttacaacggctctgcattcacccgcctctataaatagg 5632775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 375 - 442
Target Start/End: Complemental strand, 6445168 - 6445101
Alignment:
Q  375 ttacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatct 442  Q
    ||||||||||||||||  |   |||||||||| | |||||||||  ||||||||||||||||||||||    
T  6445168 ttacaacggctctgcaaacactcacctctatataaaggggactctttgcagtccccaaggtagaatct 6445101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 138 - 469
Target Start/End: Original strand, 10741 - 11072
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    ||||||||| ||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||    
T  10741 tgttctggatcggccaaaaggatctttggcccattcacttaggcccaataccatccaaagcccaaacaccacgtttggcaaaattactcgcgacacaccc 10840  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 337  Q
    |||||| |||||||| |||||  ||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10841 cttccatgcgaggggagtgcaaggaacgaaagagaccggttcaaaagaaacccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 10940  T
Q  338 tcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtag 437  Q
    ||||| ||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||| ||||||||||| ||    
T  10941 tcccatgatttcgtaaccgtcagagttaggtgtgccattacaacggctctacagccctccacctttataaatagtggactcaatggagtccccaagggag 11040  T
Q  438 aatctttcttcctctcaaaccctcactctctg 469  Q
    ||||||||||||||| ||||||||| ||||||    
T  11041 aatctttcttcctctaaaaccctcattctctg 11072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265 (Bit Score: 227; Significance: 1e-125; HSPs: 3)
Name: scaffold0265
Description:

Target: scaffold0265; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 142 - 469
Target Start/End: Complemental strand, 15204 - 14871
Alignment:
Q  142 ctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccccttc 241  Q
    ||||||||||| |||||||||||| |||||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||  ||||||||||||    
T  15204 ctggaccggccaaaaggatctttggcccattcacttaggcccagtactatccaaagcccaaacaccacgtttggcaaaattactcgcgacacaccccttc 15105  T
Q  242 cacgcgagggggg------tgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttaca 335  Q
    |||| ||||||||      ||||| |||||||||||  |||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||    
T  15104 cacgtgaggggggggggggtgcacggaacgaaagagatcggttcaaacgaaccccagcgtctctttccacgttcccgcaataaactcacaggctgttaca 15005  T
Q  336 cttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggt 435  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||    
T  15004 cttcccacgatttcgtaaccgtcagagttaggtgtgccattacaacggctctgcggccatccacctttataaataggggactcaatgcagtccccaaggt 14905  T
Q  436 agaatctttcttcctctcaaaccctcactctctg 469  Q
    ||||||||||||||||| ||||||||||||||||    
T  14904 agaatctttcttcctctaaaaccctcactctctg 14871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265; HSP #2
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 138 - 328
Target Start/End: Complemental strand, 17384 - 17194
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    ||||||||||||||| |||| ||||||| |||||| ||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||| ||||||||    
T  17384 tgttctggaccggccaaaagaatctttggcccattcacttaggcccagtaccatccaaatcccaaacaccacgtttggcaaaattactcgtgacacaccc 17285  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggc 328  Q
    |||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  17284 cttccacgcgaggggggtgcacggaacgaaagagactggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcacaggc 17194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 365 - 469
Target Start/End: Complemental strand, 17190 - 17086
Alignment:
Q  365 aggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatctttcttcctctcaaaccctcact 464  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||| |||    
T  17190 aggtgtgccattacaacagctctgcagccctccacctctataaatatgggactcaatgcagtctccaaggtagaatctttcttcctctaaaacccttact 17091  T
Q  465 ctctg 469  Q
    |||||    
T  17090 ctctg 17086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 227; Significance: 1e-125; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 142 - 469
Target Start/End: Original strand, 21817605 - 21817938
Alignment:
Q  142 ctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccccttc 241  Q
    ||||||||||| |||||||||||| |||||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||  ||||||||||||    
T  21817605 ctggaccggccaaaaggatctttggcccattcacttaggcccagtactatccaaagcccaaacaccacgtttggcaaaattactcgcgacacaccccttc 21817704  T
Q  242 cacgcgagggg------ggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttaca 335  Q
    |||| ||||||      ||||||| |||||||||||  |||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||    
T  21817705 cacgtgaggggggggggggtgcacggaacgaaagagatcggttcaaacgaaccccagcgtctctttccacgttcccgcaataaactcacaggctgttaca 21817804  T
Q  336 cttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggt 435  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||    
T  21817805 cttcccacgatttcgtaaccgtcagagttaggtgtgccattacaacggctctgcggccatccacctttataaataggggactcaatgcagtccccaaggt 21817904  T
Q  436 agaatctttcttcctctcaaaccctcactctctg 469  Q
    ||||||||||||||||| ||||||||||||||||    
T  21817905 agaatctttcttcctctaaaaccctcactctctg 21817938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 138 - 469
Target Start/End: Original strand, 24973756 - 24974086
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    |||| |||||||||| ||||| ||||||  |||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||| |  ||||| ||    
T  24973756 tgttatggaccggccaaaaggttctttggtccatttacttaggcccaatatcatccaaagcccaaacaccacgttttgcaaaattacttgcgacacatcc 24973855  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 337  Q
    |||||| || ||||| |||||||||||||||||| |||||||||||||||| ||||||||||||| |  ||||| |||||||||||||||||||||||||    
T  24973856 cttccaagcaagggg-gtgcacagaacgaaagagaccggttcaaacgaacctcaacgtctctttcaacattcccacaataaactcacaggcggttacact 24973954  T
Q  338 tcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtag 437  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||    
T  24973955 tcccacgatttcgtaaccgtcagagttaggtgtgccattacaacggctctgcagccctctaactctataaataggggactcaatgcagtcaccaaggtag 24974054  T
Q  438 aatctttcttcctctcaaaccctcactctctg 469  Q
    ||||| ||||||||| ||||||||||||||||    
T  24974055 aatctctcttcctctaaaaccctcactctctg 24974086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 134 - 468
Target Start/End: Original strand, 19967284 - 19967618
Alignment:
Q  134 ttattgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacac 233  Q
    ||||||||||||||||| | |||||| |||||  ||||||||||||||||||||| |||||||| |||||||| ||||||| |||| ||||  |  ||||    
T  19967284 ttattgttctggaccggtcaaaaggacctttgatccatttacttaggcccaatacgatccaaagtccaaacaccacgtttgacaaagttacctgcgacac 19967383  T
Q  234 accccttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggtta 333  Q
    |||||||||||   |||||| ||||| || |||||||| | |||||||||||||| |||||||||| | || ||||||||||||||||| | ||||||||    
T  19967384 accccttccacataaggggg-tgcacggagcgaaagagactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctctggcggtta 19967482  T
Q  334 cacttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaag 433  Q
    |||  |||||||||||||||||| ||| |  ||||||| ||||||||||| | |||| ||||||||||||||||||||||||||||| |||||||| |||    
T  19967483 caccacccacgatttcgtaaccgccagagccaggtgtgtcattacaacggttatgcaaccctccacctctataaataggggactcaaagcagtccctaag 19967582  T
Q  434 gtagaatc--tttcttcctctcaaaccctcactctct 468  Q
    ||||||||  | ||||||||| |||||||||||||||    
T  19967583 gtagaatccatctcttcctct-aaaccctcactctct 19967618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 140 - 468
Target Start/End: Original strand, 19441982 - 19442310
Alignment:
Q  140 ttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacacccct 239  Q
    ||||||||||||| |||||| ||||| |||||||||||||||||||||| ||||||| | ||||||| |||||||||||| ||||| |  ||||||||||    
T  19441982 ttctggaccggccaaaaggacctttggcccatttacttaggcccaatacaatccaaaactcaaacaccacgtttggcaaagttacttgcgacacacccct 19442081  T
Q  240 tccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacacttc 339  Q
    ||||| | |||||| ||  | || |||||||| | ||||||| |||||| |||||||||| | || |||||| |||||||||| | |||||||| |||||    
T  19442082 tccacacaaggggg-tgtgcggagcgaaagagactggttcaatcgaaccacaacgtctctctacacgttcccacaataaactctctggcggttatacttc 19442180  T
Q  340 ccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaa 439  Q
    || |||||||||||||| ||| || || |||| ||||||||||||| |||||| ||||||||||||||||||||||||||  ||||||||||||||||||    
T  19442181 ccccgatttcgtaaccgccagagtcagatgtgtcattacaacggctttgcagcactccacctctataaataggggactcacagcagtccccaaggtagaa 19442280  T
Q  440 tc--tttcttcctctcaaaccctcactctct 468  Q
    ||  | ||||||||| |||||||||||||||    
T  19442281 tctatctcttcctct-aaaccctcactctct 19442310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 138 - 328
Target Start/End: Original strand, 21815425 - 21815615
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    ||||||||||||||| |||| ||||||| |||||| ||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||| ||||||||    
T  21815425 tgttctggaccggccaaaagaatctttggcccattcacttaggcccagtaccatccaaatcccaaacaccacgtttggcaaaattactcgtgacacaccc 21815524  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggc 328  Q
    |||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  21815525 cttccacgcgaggggggtgcacggaacgaaagagactggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcacaggc 21815615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 137 - 440
Target Start/End: Complemental strand, 9859303 - 9858996
Alignment:
Q  137 ttgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacacc 236  Q
    |||||||||||||||| |||||||||||| |  ||| |||||| || ||||| |||||||  |||||||| |||||||||||| ||||| | ||||||||    
T  9859303 ttgttctggaccggccaaaaggatctttgacttattgacttagacctaatacaatccaaaatccaaacaccacgtttggcaaacttacttgcaacacacc 9859204  T
Q  237 ccttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacac 336  Q
    |||| |  || ||||||||||||||| |||  ||| |  ||||||||||||| |||||||||| | || |||||||||||||||||   |||||||||||    
T  9859203 cctttcctgcaaggggggtgcacagagcgagtgagactcgttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctttggcggttacac 9859104  T
Q  337 ttcccacgatttcgtaaccgtcagtg-taag---gtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaa 432  Q
    |||||||||||||||||||||||| |  |||   |||||| |  |||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  9859103 ttcccacgatttcgtaaccgtcagagccaagtgtgtgtgcaaccacaacggctctgcagccctccacctctataaataggggactcatagcagtccccaa 9859004  T
Q  433 ggtagaat 440  Q
    ||||||||    
T  9859003 ggtagaat 9858996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 135 - 365
Target Start/End: Complemental strand, 49472536 - 49472309
Alignment:
Q  135 tattgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacaca 234  Q
    |||| ||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||| ||||||||  |||||| ||||||||||||  | |||    
T  49472536 tattattctggaccgggcaaaaggatctttgacccatttacttaggcccaataccatccaaagtccaaacaccgcgtttgacaaaattactcgcgaaaca 49472437  T
Q  235 ccccttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttac 334  Q
    ||||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||     
T  49472436 cccctcccacgcgag-ggggtgcacggaacgaaagagaccggttcaaatgaaccccaacgtctctttccacgttcccgcaataaactcacatgcggttat 49472338  T
Q  335 acttcccacgatttcgtaaccgtcagtgtaa 365  Q
    |||  | ||||||||||||||||||| ||||    
T  49472337 act--ctacgatttcgtaaccgtcagagtaa 49472309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 328 - 469
Target Start/End: Original strand, 22186045 - 22186186
Alignment:
Q  328 cggttacacttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtc 427  Q
    ||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||    
T  22186045 cggttacacttcccacgattttgtaaccgtccgagtaaggtgtgccattacaacggctctgcagccatccacctctataaataggggacttaaagcagtc 22186144  T
Q  428 cccaaggtagaatctttcttcctctcaaaccctcactctctg 469  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  22186145 cccaaggtagaatctttcttcctctcaaaccctcactctctg 22186186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 140 - 442
Target Start/End: Complemental strand, 38622132 - 38621830
Alignment:
Q  140 ttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacacccct 239  Q
    ||||||||||| | ||||||  |||| || ||||||||||||||||||| ||||||||| ||||||  |||||| || | |||||| |  ||| ||||||    
T  38622132 ttctggaccggacaaaaggacttttgacctatttacttaggcccaatacaatccaaagctcaaacatcacgtttagcgacattacttgcgacatacccct 38622033  T
Q  240 tccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacacttc 339  Q
    ||| |||||||||||| ||| || |||  |||  ||||| ||||||||| |||||||||| | || |||||||||||||| |    ||| |||||||||     
T  38622032 tccccgcgaggggggtccacggagcgagcgagatcggttaaaacgaaccacaacgtctctctgcacgttcccgcaataaattgtttggcagttacacttt 38621933  T
Q  340 ccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaa 439  Q
    ||||||||||||||||  ||| |  |  ||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||    
T  38621932 ccacgatttcgtaaccaccagagccaaatgtgccattacaacggctctgcagccctccacctctatatataagggactcactgcagtccccaaggtagaa 38621833  T
Q  440 tct 442  Q
    |||    
T  38621832 tct 38621830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 138 - 442
Target Start/End: Original strand, 8995308 - 8995610
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    |||| ||||||| || |||||| ||||| ||||||||||||| |||||||| ||| |||||| |||||| ||||||| ||| |||||| |  ||| ||||    
T  8995308 tgttttggaccgaccaaaaggacctttggcccatttacttagacccaatactatctaaagcctaaacaccacgtttgacaacattacttgcgacataccc 8995407  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 337  Q
    ||| | | |||||||| ||||| || |||  ||| ||||||||| | | || ||||||||||   || |||||||||||||||||   ||||||||||||    
T  8995408 ctttcccacgaggggg-tgcacggagcgagcgagaccggttcaagcaagccacaacgtctctcagcacgttcccgcaataaactctatggcggttacact 8995506  T
Q  338 tcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtag 437  Q
    |||||||||||||||||||  || |  ||||||| || | |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  8995507 tcccacgatttcgtaaccgctagagctaggtgtgtcaat-caacggctctgcagccctccacctctataaataggggactcactgcattccccaaggtag 8995605  T
Q  438 aatct 442  Q
    |||||    
T  8995606 aatct 8995610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 273 - 469
Target Start/End: Original strand, 8990765 - 8990962
Alignment:
Q  273 ccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacacttcccacgatttcgtaaccgtcagtgtaaggtgtgc 372  Q
    ||||||||| | | || |||||||||| | || |||| | |||||||||| | | | |||||||||||||||||||||||||||  || |  ||||||||    
T  8990765 ccggttcaagcaagccacaacgtctctctgcacgttctcacaataaactctctgacagttacacttcccacgatttcgtaaccgctagagccaggtgtgc 8990864  T
Q  373 cattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatct--ttcttcctctcaaaccctcactctctg 469  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||   ||||||||| ||||||||||||||||    
T  8990865 cattacaacggctctacagccctccacctctgtaaataggggactcactgcagtccccacggtagaatctaactcttcctct-aaaccctcactctctg 8990962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 365 - 469
Target Start/End: Original strand, 21815619 - 21815723
Alignment:
Q  365 aggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatctttcttcctctcaaaccctcact 464  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||| |||    
T  21815619 aggtgtgccattacaacagctctgcagccctccacctctataaatatgggactcaatgcagtctccaaggtagaatctttcttcctctaaaacccttact 21815718  T
Q  465 ctctg 469  Q
    |||||    
T  21815719 ctctg 21815723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 136 - 253
Target Start/End: Complemental strand, 33029126 - 33029009
Alignment:
Q  136 attgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacac 235  Q
    ||||||||||||||||| ||| ||  |||| | || |||||||||| |||||  ||||||||||||||||| ||||||| | | |||||| |  ||||||    
T  33029126 attgttctggaccggccaaaatgagttttggctcaattacttaggcacaatataatccaaagcccaaacaccacgtttgactatattacttgcgacacac 33029027  T
Q  236 cccttccacgcgaggggg 253  Q
    ||||||| || |||||||    
T  33029026 cccttccccgtgaggggg 33029009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 375 - 460
Target Start/End: Original strand, 170684 - 170769
Alignment:
Q  375 ttacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatctttcttcctctcaaaccct 460  Q
    ||||||||||||||||  | |||||||||||||||||| | ||||  |||| | |||||||||||||| ||   ||||||||||||    
T  170684 ttacaacggctctgcattcatccacctctataaataggaggctcatcgcagcctccaaggtagaatctctcacactctcaaaccct 170769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 224; Significance: 1e-123; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 138 - 469
Target Start/End: Complemental strand, 25821047 - 25820716
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    ||||||||||||||| |||||||||||| || ||||| || |||| ||||||||||||||||||||||| ||||||||||||||||||||  ||| || |    
T  25821047 tgttctggaccggccaaaaggatctttggccaatttatttgggccgaataccatccaaagcccaaacaccacgtttggcaaaattactcgcgacaaacac 25820948  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 337  Q
    |||||  | |||||||||||||  ||||||||   ||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  25820947 cttccgtgtgaggggggtgcacgaaacgaaaggaaccgattcaaacgaaccccaacgtctctttccacgttccagcaataaactcacaggcggttacact 25820848  T
Q  338 tcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtag 437  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  25820847 tcccacgatttcgtaaccgtcagagtaaggtgtgccattacaacggctttgcagccctccacctctaaaaataggggactcaatgcagtccccatggtag 25820748  T
Q  438 aatctttcttcctctcaaaccctcactctctg 469  Q
    ||||||||||||||||||||||| ||||||||    
T  25820747 aatctttcttcctctcaaacccttactctctg 25820716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 137 - 468
Target Start/End: Original strand, 18040356 - 18040680
Alignment:
Q  137 ttgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacacc 236  Q
    |||||||||||||||| |||||| ||||| |||||||||||||||| ||||  ||||||||||||||||| |      ||||| ||||| || |||||||    
T  18040356 ttgttctggaccggccaaaaggacctttggcccatttacttaggcc-aatataatccaaagcccaaacacca------gcaaagttacttgtgacacacc 18040448  T
Q  237 ccttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacac 336  Q
    |||||||| | ||| |||||||| || |||||||| | |||||||||||||| |||||||||| | || |||||||||||||||||   |||||||||||    
T  18040449 ccttccacacaaggtgggtgcacggagcgaaagagactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctatggcggttacac 18040548  T
Q  337 ttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggta 436  Q
    |||||||||||||||||||||||| |  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  18040549 ttcccacgatttcgtaaccgtcagagccaggtgtgccattacaacggctctgcagctctccacctctataaataggggactcaa-gcagtccccaaggta 18040647  T
Q  437 gaatc--tttcttcctctcaaaccctcactctct 468  Q
    |||||  | ||||||||| ||||| |||||||||    
T  18040648 gaatcaatctcttcctct-aaaccttcactctct 18040680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 139 - 468
Target Start/End: Original strand, 32008884 - 32009213
Alignment:
Q  139 gttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacacccc 238  Q
    |||||||||||||| |||||| ||||| ||||| |||||||||||||||| ||| ||||||||||||| ||||||| |||| ||||| || |||||||||    
T  32008884 gttctggaccggccaaaaggacctttgacccatatacttaggcccaatacaatcgaaagcccaaacaccacgtttgacaaagttacttgtgacacacccc 32008983  T
Q  239 ttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacactt 338  Q
    |||| | | |||||| ||||| || |||||||| | |||||||||||||| || ||||||| | || ||||||||||||| ||| |  ||| ||||||||    
T  32008984 ttcctcacaaggggg-tgcacggagcgaaagagactggttcaaacgaaccacagcgtctctctgcacgttcccgcaataatctctctagcgattacactt 32009082  T
Q  339 cccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtaga 438  Q
    |||||||||||||||||| ||| || ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | | ||||||||||| |    
T  32009083 cccacgatttcgtaaccgccagagtcaggtgtgccattacaacggctctacagccctccacctctataaataggggactcaaagtactccccaaggtaaa 32009182  T
Q  439 atc--tttcttcctctcaaaccctcactctct 468  Q
    |||  | ||||||||| |||||||||||||||    
T  32009183 atctatctcttcctct-aaaccctcactctct 32009213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 141 - 433
Target Start/End: Original strand, 18573889 - 18574181
Alignment:
Q  141 tctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacacccctt 240  Q
    |||||||||||| ||||||| ||||  ||||||||||||||| ||||| || |||||||||||||| |||||||||||| ||||| |  ||||| |||||    
T  18573889 tctggaccggccaaaaggatttttggtccatttacttaggcctaatacaatgcaaagcccaaacaccacgtttggcaaagttacttgcgacacatccctt 18573988  T
Q  241 ccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacacttcc 340  Q
    |||| | |||||||||||  || | ||||||   |||||||||||||| |||||||||| | || |||||| |||||||||| | |||||||||||||||    
T  18573989 ccacacaaggggggtgcatggagcaaaagagagtggttcaaacgaaccacaacgtctctctgcacgttcccacaataaactctctggcggttacacttcc 18574088  T
Q  341 cacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaag 433  Q
    |||||||||||||||| ||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  18574089 cacgatttcgtaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaaagcattccccaag 18574181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 169 - 468
Target Start/End: Original strand, 2085642 - 2085942
Alignment:
Q  169 catttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccccttccacgcgaggggggtgcacagaacgaaa 268  Q
    |||||||||||||||||| | || ||||||| |||||| |||||||| ||| ||||| | ||||||||||||||| || |||||||| ||| || |||||    
T  2085642 catttacttaggcccaatgcaattcaaagcctaaacaccacgtttggaaaagttacttgcaacacaccccttccaagcaaggggggtacacggagcgaaa 2085741  T
Q  269 gaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacacttcccacgatttcgtaaccgtcagtgtaaggt 368  Q
    ||| |  ||||||||||||| ||| |||||| | ||||||||||||||||||   | |||  |||||||||||||||||||||||||| ||| |  ||||    
T  2085742 gagactagttcaaacgaaccacaatgtctctctgcatgttcccgcaataaacgacctggcaattacacttcccacgatttcgtaaccgccagagccaggt 2085841  T
Q  369 gtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatc--tttcttcctctcaaaccctcactct 466  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||| |||||||||||||    
T  2085842 gtgccattacaacggttctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatctatctcttcctct-aaaccctcactct 2085940  T
Q  467 ct 468  Q
    ||    
T  2085941 ct 2085942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 137 - 469
Target Start/End: Complemental strand, 7999980 - 7999649
Alignment:
Q  137 ttgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacacc 236  Q
    |||||||||||||||| ||||||  |||| |||||||||||||||||||||| ||||| | ||| |||||  ||||||||||||||||| |  |||||||    
T  7999980 ttgttctggaccggccaaaaggacatttggcccatttacttaggcccaatacaatccacaacccgaacaccgcgtttggcaaaattacttgcgacacacc 7999881  T
Q  237 ccttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacac 336  Q
    |||||||| | ||| | |||||| || ||| |||| | ||||| |||||||| |||||||||| | |||||||||||||||||||| | |||||||||||    
T  7999880 ccttccacacaaggcgagtgcacggagcgacagagactggttccaacgaaccacaacgtctctctgcatgttcccgcaataaactctctggcggttacac 7999781  T
Q  337 ttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggta 436  Q
    |||||||||||||||||||| ||| |  ||||||| |||||||||||  |||||| |||||||||||||||| ||| ||||||  |||||||||||||||    
T  7999780 ttcccacgatttcgtaaccgccagagccaggtgtgtcattacaacgg--ctgcagtcctccacctctataaacaggagactcacggcagtccccaaggta 7999683  T
Q  437 gaatc--tttcttcctctcaaaccctcactctctg 469  Q
    |||||  | ||||||||| ||||||||||||||||    
T  7999682 gaatctatctcttcctct-aaaccctcactctctg 7999649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 137 - 442
Target Start/End: Original strand, 41280676 - 41280982
Alignment:
Q  137 ttgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacacc 236  Q
    |||||||||||||| | |||||| ||||| ||||||||||||||||||| || ||||||||||||||||| | ||||||||| |||||| |  |||||||    
T  41280676 ttgttctggaccggacaaaaggacctttgacccatttacttaggcccaacacaatccaaagcccaaacaccatgtttggcaacattacttgcgacacacc 41280775  T
Q  237 cc-ttccacgcgagggggg-tgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttac 334  Q
    || || | | | ||||||| ||||| || |||   || ||||||||||||| || ||||| |||| | || ||||||||||||||||| | |||||||||    
T  41280776 ccctttcgcacaagggggggtgcacggagcgagcaagaccggttcaaacgagccacaacg-ctctctgcacgttcccgcaataaactctctggcggttac 41280874  T
Q  335 acttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaagg 434  Q
    |||||||||||||| ||||||  ||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||||||    
T  41280875 acttcccacgattttgtaacccccagagtcaggtgtgccattacaacggctctgcagtcctccacctctataaataggggactcataacagtccccaagg 41280974  T
Q  435 tagaatct 442  Q
    ||||||||    
T  41280975 tagaatct 41280982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 138 - 469
Target Start/End: Original strand, 7454521 - 7454867
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    ||||||||||||||| |||||||||||| || |||||||||||||||| || ||||||||||||||| | |||||||||||| ||||| | |||||||||    
T  7454521 tgttctggaccggccaaaaggatctttggcctatttacttaggcccaacacaatccaaagcccaaactccacgtttggcaaacttacttgcaacacaccc 7454620  T
Q  238 cttccacgc--------------gaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactca 323  Q
    ||||  |||              | ||||||||||| || |||  ||| |||||||| |||| || |||||||||| | || |||||| ||||||||||     
T  7454621 cttctccgccgggggggggggggggggggggtgcacggagcgagcgagaccggttcatacgagccacaacgtctctatgcacgttcccacaataaactct 7454720  T
Q  324 caggcggttacacttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgc 423  Q
      | ||||||||||||||||||||||||||||| ||| |  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||    
T  7454721 atgacggttacacttcccacgatttcgtaaccgccagagccaggtgtgccattacaacggctctgcagccttccacctctataaataggggactcatagc 7454820  T
Q  424 agtccccaaggtagaatc--tttcttcctctcaaaccctcactctctg 469  Q
    |||||||||| |||||||  | ||||||| | ||||||||||||||||    
T  7454821 agtccccaagttagaatctatctcttcctgt-aaaccctcactctctg 7454867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 139 - 469
Target Start/End: Complemental strand, 24060888 - 24060557
Alignment:
Q  139 gttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacacccc 238  Q
    |||||||||||| | |||||| ||||| |||||||||||||||||||||| |||||||| | ||| || ||||| || || |||||| |  |||||||||    
T  24060888 gttctggaccggtcaaaaggagctttggcccatttacttaggcccaatacaatccaaagtcgaaataccacgttaggaaacattacttgcgacacacccc 24060789  T
Q  239 ttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacactt 338  Q
    |||| |||||||| ||||||| || | |   || ||||||| |||||||| |||| ||||| | |||||||| ||||||| ||| | ||| |||||||||    
T  24060788 ttccccgcgagggaggtgcacggagcaagcaagaccggttctaacgaaccacaacatctctctgcatgttcctgcaataatctctctggcagttacactt 24060689  T
Q  339 cccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtaga 438  Q
    || ||||||| ||||||| ||| |   |||||||||| |||||||||||||||||||||||||||||| ||| |||||||   |||||| ||||||||||    
T  24060688 cctacgattttgtaaccgccagagcctggtgtgccatcacaacggctctgcagccctccacctctatatataagggactcttagcagtctccaaggtaga 24060589  T
Q  439 atcttt--cttcctctcaaaccctcactctctg 469  Q
    |||| |  |||||||| ||||||||||| ||||    
T  24060588 atctatcgcttcctct-aaaccctcactatctg 24060557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 281 - 440
Target Start/End: Original strand, 10532801 - 10532960
Alignment:
Q  281 aacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacacttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaa 380  Q
    |||||||| |||||||||| |||| ||||| ||||||||| | | ||||||||||||| ||||||||||||||||| ||| || ||||||||||||||||    
T  10532801 aacgaaccacaacgtctctctccacgttcctgcaataaacaccctggcggttacactttccacgatttcgtaaccgccagagtcaggtgtgccattacaa 10532900  T
Q  381 cggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaat 440  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  10532901 cggctctgcagccctccacctctataaataggggacttaatggagtccccaaggtagaat 10532960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 140 - 441
Target Start/End: Complemental strand, 11709709 - 11709396
Alignment:
Q  140 ttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacacccct 239  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||| |||||||||||||| || ||||||| ||| |||||| |  ||||||||||    
T  11709709 ttctggaccggccaaaaggatctttggcccatttacttaggcccaatacaatccaaagcccaaataccacgtttgacaatattacttgcgacacacccct 11709610  T
Q  240 tccacgcgagg------------ggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacagg 327  Q
    ||  |||||||            ||||||||| |||  |   ||  ||||||||||||||| |||||||||| | || |||||| |||||| ||| | ||    
T  11709609 tcaccgcgaggggggggggggggggggtgcacggaataagcaagatcggttcaaacgaaccacaacgtctctctgcacgttcccacaataatctctctgg 11709510  T
Q  328 cggttacacttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtc 427  Q
    ||||||||||||||||||||||||||  | ||| |   ||||||||||||||||||||||||| ||||||||||||||| |||||||||||   ||||||    
T  11709509 cggttacacttcccacgatttcgtaaatgccagagcctggtgtgccattacaacggctctgcaaccctccacctctatatataggggactctcagcagtc 11709410  T
Q  428 cccaaggtagaatc 441  Q
    |  |||||||||||    
T  11709409 cgaaaggtagaatc 11709396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 181 - 468
Target Start/End: Complemental strand, 24034053 - 24033762
Alignment:
Q  181 cccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccccttccacgcgaggggggtgcacagaacgaaagaggccggttca 280  Q
    |||||||| ||||||| || |||||| ||||| |||||| ||||| |   |||||||||| | | | |||||||||||| ||   || ||| | ||||||    
T  24034053 cccaatacaatccaaatcctaaacaccacgttcggcaaagttacttgcgtcacacccctttcccacaaggggggtgcacggagaaaacgagactggttca 24033954  T
Q  281 aacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacacttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaa 380  Q
    |||||||| ||| |||||| | || ||||||||||||||||| | ||||||||||||| ||||||||||||||||| ||  || | ||||||||||||||    
T  24033953 aacgaaccacaatgtctctctgcacgttcccgcaataaactctctggcggttacactttccacgatttcgtaaccgccaaagtcaagtgtgccattacaa 24033854  T
Q  381 cggctctgcagccctccacct---ctataaataggggactcaatgcagtccccaaggtagaatc--tttcttcctctcaaaccctcactctct 468  Q
    |||||||||| ||||||||||    ||||| |||||||||||  ||||||||||| ||||||||  | ||||||||| ||||| |||||||||    
T  24033853 cggctctgcaaccctccacctatattataactaggggactcatagcagtccccaatgtagaatctatctcttcctct-aaaccttcactctct 24033762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 138 - 466
Target Start/End: Original strand, 33273391 - 33273704
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    |||| ||||||| || |||||||||||| |||||||||||||||| ||||| ||||||||||||||||| |||||||||||| ||||| | ||||||| |    
T  33273391 tgttatggaccgaccaaaaggatctttggcccatttacttaggcctaatactatccaaagcccaaacaccacgtttggcaaatttacttgcaacacactc 33273490  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 337  Q
     |  | ||| ||||||||||   || |||   || ||||||||||||| || |||||||||| | || |||||||||||||  ||   ||||||||||||    
T  33273491 ttctcccgcaaggggggtgcgaggagcgagcaagaccggttcaaacgagccacaacgtctctctgcacgttcccgcaataagttctatggcggttacact 33273590  T
Q  338 tcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtag 437  Q
    ||||||||       |||         | |||||||||||||||||||||||| ||||||||||||||||||||||||||||  | ||||||||||||||    
T  33273591 tcccacga-------acc---------aagtgtgccattacaacggctctgcaaccctccacctctataaataggggactcataggagtccccaaggtag 33273674  T
Q  438 aatctttcttcctctc-aaaccctcactct 466  Q
    ||||| |||   |||| |||||||||||||    
T  33273675 aatctatctctttctctaaaccctcactct 33273704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 138 - 406
Target Start/End: Original strand, 22609363 - 22609631
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    |||||||||||| || ||||||||||||  |||||||||||||||||||| |||||||||||||||||| | ||||| ||| |||| | | |||||| ||    
T  22609363 tgttctggaccgaccaaaaggatctttgatccatttacttaggcccaata-catccaaagcccaaacaccatgtttgacaacattatttgcaacacatcc 22609461  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 337  Q
    |||||  |||| |||||||||| || |||  |||   |||||||||||||| | |  ||||| | ||||||| |||||||||||| | | |||||||||     
T  22609462 cttccctgcga-gggggtgcacggagcgagcgagattggttcaaacgaaccacgatatctctctgcatgttcacgcaataaactctctgtcggttacaca 22609560  T
Q  338 tcccacgatttcgtaaccgtcagtgtaaggtgtg--ccattacaacggctctgcagccctccacctctata 406  Q
    || |||||||||||||||| ||| |  |||||||  |||| |||||| ||||||| |||||||||||||||    
T  22609561 tctcacgatttcgtaaccgccagagccaggtgtgtaccatcacaacgactctgcaaccctccacctctata 22609631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 387 - 469
Target Start/End: Complemental strand, 1788732 - 1788650
Alignment:
Q  387 tgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatctttcttcctctcaaaccctcactctctg 469  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  1788732 tgcagccctccacctctataaataggagactcaatgcagtcaccaaggtagaatctttcttcctctcaaaccctcactctctg 1788650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 162 - 320
Target Start/End: Original strand, 10532633 - 10532791
Alignment:
Q  162 tttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccccttccacgcgaggggggtgcacag 261  Q
    |||| ||||||||||||||||||||||||| |||||| ||||| | ||||||||||||  |||| |   |||||||||| || || |||||||| |||      
T  10532633 tttgacccatttacttaggcccaataccattcaaagctcaaacgccacgtttggcaaagatacttgcggcacaccccttacatgcaaggggggtacacga 10532732  T
Q  262 aacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaac 320  Q
    | ||||||||   |||||||||||||| |||||||||| |||| ||||| |||||||||    
T  10532733 agcgaaagagattggttcaaacgaaccacaacgtctctctccacgttcctgcaataaac 10532791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 162 - 299
Target Start/End: Complemental strand, 17775926 - 17775790
Alignment:
Q  162 tttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccccttccacgcgaggggggtgcacag 261  Q
    |||| ||||||||| |||| ||||||| ||||||||||||||||  |||||||||||| ||||| |  ||||||||||||||| | | ||||||| || |    
T  17775926 tttggcccatttacctaggtccaatacaatccaaagcccaaacatcacgtttggcaaagttacttgcgacacaccccttccacac-aagggggtgtacgg 17775828  T
Q  262 aacgaaagaggccggttcaaacgaaccccaacgtctct 299  Q
    | |||||||| | ||||||| |||||| ||||||||||    
T  17775827 agcgaaagagactggttcaatcgaaccacaacgtctct 17775790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 229 - 390
Target Start/End: Original strand, 1038940 - 1039103
Alignment:
Q  229 aacacaccccttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctcttt--ccatgttcccgc-aataaactcaca 325  Q
    |||||||||||||| |||||||||||||||| || | | |||| |  ||||||||||||   |||||||||||  ||||||||| || |||| | ||||     
T  1038940 aacacaccccttccccgcgaggggggtgcacggagcaacagagactagttcaaacgaactgtaacgtctctttacccatgttcctgcgaatata-tcacc 1039038  T
Q  326 ggcggttacacttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgca 390  Q
    |  ||||||||||||  |||||||||||| |||||    | ||||| ||||||||| ||||||||    
T  1039039 gatggttacacttcctccgatttcgtaacagtcagacacacgtgtgtcattacaacagctctgca 1039103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 369 - 446
Target Start/End: Complemental strand, 9251588 - 9251511
Alignment:
Q  369 gtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatctttct 446  Q
    ||||||||||||||||||||||  |  ||||||||||| | |||||||||   |||||||| ||| ||||||||||||    
T  9251588 gtgccattacaacggctctgcattcacccacctctatataaaggggactcctcgcagtcccaaagatagaatctttct 9251511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 326 - 390
Target Start/End: Original strand, 22282161 - 22282225
Alignment:
Q  326 ggcggttacacttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgca 390  Q
    |||| ||||||||| || ||||||||||||| |||    | ||||||||||||||||||||||||    
T  22282161 ggcgattacacttctcaagatttcgtaaccgccagacacacgtgtgccattacaacggctctgca 22282225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 320 - 360
Target Start/End: Complemental strand, 45503955 - 45503915
Alignment:
Q  320 ctcacaggcggttacacttcccacgatttcgtaaccgtcag 360  Q
    ||||| ||||||||||||||  |||||||||||||||||||    
T  45503955 ctcaccggcggttacacttcttacgatttcgtaaccgtcag 45503915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 137 - 469
Target Start/End: Original strand, 7217 - 7549
Alignment:
Q  137 ttgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacacc 236  Q
    ||||| |||||||||  |||||||||||| |||||||| ||| | |||||| |||||||||||||||||| | ||||||||||||||||||  |||||||    
T  7217 ttgttttggaccggctaaaaggatctttggcccatttatttatgtccaatatcatccaaagcccaaacaccaagtttggcaaaattactcgcgacacacc 7316  T
Q  237 ccttccacgcgagggggg-tgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttaca 335  Q
    || ||||| ||||||||| ||||| ||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  7317 ccctccacacgagggggggtgcacggaacgaaagagactggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcacaggcagttaca 7416  T
Q  336 cttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggt 435  Q
    ||||| ||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7417 cttccaacgatttcgtaac-gtcagagtaaggtgtgccattacaacggctttgcagccctccacctctataaataggggactcaatgcaatccccaaggt 7515  T
Q  436 agaatctttcttcctctcaaaccctcactctctg 469  Q
    |||||||||||||||||||||||||||| |||||    
T  7516 agaatctttcttcctctcaaaccctcaccctctg 7549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 212; Significance: 1e-116; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 138 - 469
Target Start/End: Complemental strand, 27347499 - 27347170
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    ||||||||||||| | |||||||||||| |||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||  ||||||||    
T  27347499 tgttctggaccggtcaaaaggatctttggcccatttacttaagcccaataccatccaaagcccaaacatcacgtttggcaaaattactcgcgacacaccc 27347400  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 337  Q
    |||||| | ||||||| |||||| |||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||    
T  27347399 cttccatgagaggggg-tgcacataacgaaagagactggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcataggcagttacact 27347301  T
Q  338 tcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtag 437  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||| || |||||||||| |||||| |||||||| |||||||||||||||||||||    
T  27347300 tcccatgatttcgtaaccgtcagtgttaggtgtgccattacaacggctttgtagccctccacgtctatacataggggattcaatgcagtccccaaggtag 27347201  T
Q  438 aatctttcttcctctcaaaccctcactctctg 469  Q
    ||||| ||||||||  ||||| ||||||||||    
T  27347200 aatctctcttcctc-aaaaccatcactctctg 27347170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 138 - 468
Target Start/End: Complemental strand, 3770591 - 3770260
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    ||||||||||||||| |||||| ||||| |||||||||||||||||||||| || |||||||||||||| |||||||||||| ||||| | |||||||||    
T  3770591 tgttctggaccggccaaaaggacctttggcccatttacttaggcccaatacaattcaaagcccaaacaccacgtttggcaaagttacttgcaacacaccc 3770492  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 337  Q
    ||||||| | |||||||||||  || ||| |||| | |||||||||||||| |||||||||| | || ||| ||||||||||||| |  |||||||||||    
T  3770491 cttccactcaaggggggtgcatggagcgagagagactggttcaaacgaacctcaacgtctctctgcacgtttccgcaataaactctctagcggttacact 3770392  T
Q  338 tcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtag 437  Q
    | ||||||||| ||||||| ||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||| |||   |||||||||||||||    
T  3770391 ttccacgattttgtaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaataggggattcacaacagtccccaaggtag 3770292  T
Q  438 aatc--tttcttcctctcaaaccctcactctct 468  Q
    ||||  | ||||||| | |||||||||||||||    
T  3770291 aatctatctcttcct-ttaaaccctcactctct 3770260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 138 - 468
Target Start/End: Original strand, 23755687 - 23756018
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    ||||||||||||||| |||||| ||||| ||||||||| |||||||||||| ||||||||||||||||| | |||||| ||| ||||| | |||||||||    
T  23755687 tgttctggaccggccaaaaggacctttggcccatttacctaggcccaatacaatccaaagcccaaacaccatgtttggtaaagttacttgcaacacaccc 23755786  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 337  Q
    |||||| || |||||||||||| || |||||| | | |||||||| ||||| |||||||||| | || |||||||||||||||||   ||||||||||||    
T  23755787 cttccaagcaaggggggtgcacggagcgaaagtgactggttcaaaagaaccacaacgtctctctgcacgttcccgcaataaactctatggcggttacact 23755886  T
Q  338 tcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtag 437  Q
    |||||||||||||||||||  || |  ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||   |||||||||||||||    
T  23755887 tcccacgatttcgtaaccgctagagccaggtgtgccattacaacggctctacagccttccacctctataaataggggactcacaacagtccccaaggtag 23755986  T
Q  438 aatc--tttcttcctctcaaaccctcactctct 468  Q
    ||||  | ||||||||| |||||||||||||||    
T  23755987 aatctatctcttcctct-aaaccctcactctct 23756018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 135 - 468
Target Start/End: Original strand, 41266062 - 41266396
Alignment:
Q  135 tattgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacaca 234  Q
    |||||||||||||||| | ||||||| || | |||||||||||||||||||||| |||||||  |||||||| | |||||||||| ||||| | |||||     
T  41266062 tattgttctggaccggtcaaaaggattttagacccatttacttaggcccaatacgatccaaaatccaaacaccatgtttggcaaagttacttgcaacacc 41266161  T
Q  235 cccc-ttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggtta 333  Q
    |||| || || || | |||| ||||| || |||| | | | |||||||||||||| |||||||||| | || ||||||||||||||||| | ||||||||    
T  41266162 ccccctttcaggcaatgggg-tgcacggagcgaa-gtgactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctcgggcggtta 41266259  T
Q  334 cacttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaag 433  Q
    |||||| |||||| ||||||||| ||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  41266260 cacttctcacgatatcgtaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcacagcagtccccaag 41266359  T
Q  434 gtagaatc--tttcttcctctcaaaccctcactctct 468  Q
    ||||||||  | ||||||||| |||||||||||||||    
T  41266360 gtagaatctatctcttcctctaaaaccctcactctct 41266396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 138 - 442
Target Start/End: Original strand, 25133793 - 25134106
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    |||||||||| |||| ||| |||||||| |||||||||||||||||| ||| ||||||||||||||||| |||||||||||| ||||| |  ||||||||    
T  25133793 tgttctggacgggccaaaaagatctttgacccatttacttaggcccattacaatccaaagcccaaacaccacgtttggcaaagttacttgcgacacaccc 25133892  T
Q  238 cttccac---------gcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggc 328  Q
    ||| |           | | ||||||||||| || | |  ||| | |||||||||||||| |||||||||||| || ||||||||||||||||| | |||    
T  25133893 ctttcctaaaaggggggggtggggggtgcacggagcaagcgagactggttcaaacgaaccacaacgtctctttgcacgttcccgcaataaactctctggc 25133992  T
Q  329 ggttacacttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcc 428  Q
    |||||||||| ||||||||||||||||| ||| |  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  25133993 ggttacacttaccacgatttcgtaaccgccagagccaggtgtgccactacaacggctctgcagccctccacctctataaataggggactcatagcagtcc 25134092  T
Q  429 ccaaggtagaatct 442  Q
    | ||||||||||||    
T  25134093 ctaaggtagaatct 25134106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 179 - 442
Target Start/End: Original strand, 42534032 - 42534295
Alignment:
Q  179 ggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccccttccacgcgaggggggtgcacagaacgaaagaggccggtt 278  Q
    |||||||||| ||||||||||||||||| ||||||| |||  ||||| |  |||| |||||| | | | ||||||||||||  | |||  ||| || |||    
T  42534032 ggcccaatacaatccaaagcccaaacaccacgtttgtcaaccttacttgcgacactcccctttcccacaaggggggtgcacgtagcgagcgagacctgtt 42534131  T
Q  279 caaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacacttcccacgatttcgtaaccgtcagtgtaaggtgtgccattac 378  Q
    ||||||| || |||||||||| | || ||||||||||||||||| | ||||||||||||||||||||||||||||||| ||| |  || |||||||||||    
T  42534132 caaacgagccacaacgtctctctgcacgttcccgcaataaactctctggcggttacacttcccacgatttcgtaaccgccagagccagatgtgccattac 42534231  T
Q  379 aacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatct 442  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  42534232 aacggctctgcagccctccacctctataaataggggactcatagcagtccccaaggtagaatct 42534295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 137 - 469
Target Start/End: Complemental strand, 3105536 - 3105203
Alignment:
Q  137 ttgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacacc 236  Q
    ||||||||||| |||| |||||| ||||   |||||||||||||||||| || ||||||||||||||||| ||||||| ||| |||||| |  |||||||    
T  3105536 ttgttctggactggccaaaaggacctttagtccatttacttaggcccaacacaatccaaagcccaaacaccacgtttgacaacattacttgcgacacacc 3105437  T
Q  237 cc-ttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttaca 335  Q
    || || | | | |||| | |||||||| |||  ||| ||||||||||||| || |||||||||| | || ||||||||||||||||| | ||||||||||    
T  3105436 ccctttcccacaagggag-tgcacagagcgagcgagaccggttcaaacgagccacaacgtctctctgcacgttcccgcaataaactctctggcggttaca 3105338  T
Q  336 cttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggt 435  Q
    |||||||||||||| ||||| | || || ||||||| ||||||||||||||| ||  |||||||||||||||||| ||||||||  ||||||||||||||    
T  3105337 cttcccacgatttcataaccatgagagttaggtgtgtcattacaacggctctacaatcctccacctctataaatatgggactcatagcagtccccaaggt 3105238  T
Q  436 agaatct--ttcttcctctcaaaccctcactctctg 469  Q
    |||||||   ||||||||| ||| ||||||||||||    
T  3105237 agaatctaactcttcctct-aaaacctcactctctg 3105203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 162 - 435
Target Start/End: Original strand, 26154875 - 26155148
Alignment:
Q  162 tttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccccttccacgcgaggggggtgcacag 261  Q
    |||| |||||||||||||| ||||||  ||  ||||  ||||||| |||||||||||| ||||| |  ||||| ||||||||| | |||||||||||| |    
T  26154875 tttgacccatttacttaggtccaatataatttaaagttcaaacaccacgtttggcaaagttacttgcgacacatcccttccacacaaggggggtgcacgg 26154974  T
Q  262 aacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacacttcccacgatttcgtaaccgtcagt 361  Q
    | ||||||||    ||||||||||||| |||| |||||||  | ||||||||||||||| | | ||||||||||||||||||||||||||||||  ||      
T  26154975 agcgaaagagattagttcaaacgaaccacaacatctctttgtacgttcccgcaataaacgctctggcggttacacttcccacgatttcgtaaccaccata 26155074  T
Q  362 gtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggt 435  Q
    |  ||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |  |||||||| ||||    
T  26155075 gccaggtgtgccattataacggctatgcagccctccacctctataaataggggactccaatcagtccccgaggt 26155148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 252 - 469
Target Start/End: Complemental strand, 23930014 - 23929796
Alignment:
Q  252 gggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacacttcccacgatttcgt 351  Q
    |||||||| || |||  ||| |||||||||| ||||| ||| |||||| | || |||||| |||||||||| | |||||||||||||||||||||| |||    
T  23930014 gggtgcacggagcgagcgagaccggttcaaatgaaccacaatgtctctctgcacgttcccacaataaactctccggcggttacacttcccacgattccgt 23929915  T
Q  352 aaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatct--ttcttcc 449  Q
    ||||| ||| |  ||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||||||||||| |||||   ||||||    
T  23929914 aaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctttatataggggactcactgcagtccccaaggtaaaatctaactcttcc 23929815  T
Q  450 tctcaaaccctcactctctg 469  Q
    ||| ||||||||||||||||    
T  23929814 tct-aaaccctcactctctg 23929796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 138 - 437
Target Start/End: Complemental strand, 19093051 - 19092753
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    ||||||||| ||| | ||||||  ||||  ||||||||||||||||||||  || |||||||||||||| | |||||| || |||||| |  ||||| ||    
T  19093051 tgttctggatcggacaaaaggagatttgatccatttacttaggcccaatattattcaaagcccaaacaccatgtttggtaacattacttgcgacacatcc 19092952  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 337  Q
    ||||  | |||||||| ||||| || ||||  || |  ||||||||||||| |||||||||| | || ||||||||||||| ||| | ||||||||||||    
T  19092951 cttctccacgaggggg-tgcacggagcgaacaagactagttcaaacgaaccacaacgtctctctgcacgttcccgcaataatctctctggcggttacact 19092853  T
Q  338 tcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtag 437  Q
    |||||| | |||| |||||  || ||  |||||| |||||||||||||||||||||| ||||||||||| ||||||||||||  ||||||||||||||||    
T  19092852 tcccacaagttcgaaaccgcgagagtctggtgtgtcattacaacggctctgcagccccccacctctatatataggggactcatagcagtccccaaggtag 19092753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 276 - 468
Target Start/End: Complemental strand, 29568507 - 29568315
Alignment:
Q  276 gttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacacttcccacgatttcgtaaccgtcagtgtaaggtgtgccat 375  Q
    |||||||||| || |||||||||| | || ||||| ||||||||||| |  |||||||||||||||||||||||||||||| ||| |  |||||| ||||    
T  29568507 gttcaaacgagccacaacgtctctctacacgttcc-gcaataaactctctagcggttacacttcccacgatttcgtaaccgccagagccaggtgtaccat 29568409  T
Q  376 tacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatc--tttcttcctctcaaaccctcactctct 468  Q
    ||||||||||||| |||||||||||||||||||| |||||||||  |||  | ||||| |||||||  | ||||||||| |||||||||||||||    
T  29568408 tacaacggctctgtagccctccacctctataaattggggactcatagcaaccgccaagttagaatctatgtcttcctct-aaaccctcactctct 29568315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 138 - 253
Target Start/End: Complemental strand, 23933010 - 23932895
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    |||||| |||||||| |||||||||||| |||||||||||||||| ||||| ||||||||||||||||| |||| || ||| |||||| |  ||||||||    
T  23933010 tgttctagaccggccaaaaggatctttggcccatttacttaggcctaatacaatccaaagcccaaacaccacgtctgacaacattacttgcgacacaccc 23932911  T
Q  238 cttccacgcgaggggg 253  Q
    ||||| |||| |||||    
T  23932910 cttccccgcggggggg 23932895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 390 - 468
Target Start/End: Original strand, 26159154 - 26159233
Alignment:
Q  390 agccctccacctctataaataggggactcaatgcagtccccaaggtagaatc--tttcttcctctcaaaccctcactctct 468  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||||  | ||||||||| |||||||||||||||    
T  26159154 agccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctct-aaaccctcactctct 26159233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 137 - 418
Target Start/End: Original strand, 22452688 - 22452968
Alignment:
Q  137 ttgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacacc 236  Q
    ||||||||||||||   |||||||| | | ||||||| ||||||| |||||  ||||||| |||||| || ||||||| ||| |||||||| |||||| |    
T  22452688 ttgttctggaccggttaaaaggatcctaggcccatttgcttaggctcaatataatccaaa-cccaaataccacgtttgacaacattactcgcaacaca-c 22452785  T
Q  237 ccttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttac-- 334  Q
    |||||| ||||||||| |||||| || | |  ||| || ||||||| ||||  |||||||||||   |||||||||    || ||| | |||||||||      
T  22452786 ccttccccgcgaggggagtgcacggagcaagcgagaccagttcaaatgaactgcaacgtctcttcgtatgttcccg--tgaatctctctggcggttacta 22452883  T
Q  335 -acttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactc 418  Q
     ||| ||||| |||||||||||  |||    | |||||||||||||| ||||||||||||  |||||||||||  ||||||||||    
T  22452884 tactccccactatttcgtaaccaccagacacacgtgtgccattacaatggctctgcagccacccacctctatatttaggggactc 22452968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 175 - 254
Target Start/End: Complemental strand, 12094384 - 12094306
Alignment:
Q  175 cttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccccttccacgcgagggggg 254  Q
    |||||||||||||||| ||| | |||||| || || |||||||| |||||||| |||||||||||||  |||||||||||    
T  12094384 cttaggcccaatacca-ccacaacccaaatactacatttggcaatattactcgcaacacaccccttctccgcgagggggg 12094306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 29569136 - 29569049
Alignment:
Q  172 ttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccccttccacgcgaggggggtgcac 259  Q
    |||||| ||| ||||| ||||||||||| |||||| || ||||||||| ||||| | |||||||||||| | ||| | ||||||||||    
T  29569136 ttactttggctcaatatcatccaaagcctaaacaccacatttggcaaacttacttgcaacacacccctttcccgcaaagggggtgcac 29569049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 26159096 - 26159158
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagccc 200  Q
    ||||||||||||||| ||||||  |||| | |||||||||||||||||||| || ||||||||    
T  26159096 tgttctggaccggccaaaaggacttttggctcatttacttaggcccaatacaattcaaagccc 26159158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 448
Target Start/End: Complemental strand, 12094184 - 12094111
Alignment:
Q  375 ttacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatctttcttc 448  Q
    |||||||||||| |||  | |||||||||||| | |||||||||   |||||||| |||||||||||| |||||    
T  12094184 ttacaacggctccgcaaacatccacctctatataaaggggactcctcgcagtccctaaggtagaatctctcttc 12094111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 191; Significance: 1e-103; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 138 - 436
Target Start/End: Original strand, 54473 - 54770
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    ||||||||||||||| |||||||||||| ||||||||||||| ||||||||  | |||||||||||  | ||||||||||||||||||||  ||||||||    
T  54473 tgttctggaccggccaaaaggatctttggcccatttacttagacccaatacactacaaagcccaaaatccacgtttggcaaaattactcgagacacaccc 54572  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 337  Q
    || |||||||||||||| |||| ||||||| ||| | |||||||||||| |||||||||||| |||| |||||||||||||||||||||| |||||||||    
T  54573 ct-ccacgcgaggggggcgcacggaacgaaggagactggttcaaacgaaacccaacgtctctctccacgttcccgcaataaactcacaggtggttacact 54671  T
Q  338 tcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggta 436  Q
    ||||| ||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  54672 tcccatgatttcgtaaccgtcagagtaaggtgtaccattacaacggctatgcagccctccacctctataaataggggactcaatgcagtcccaaaggta 54770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 152; Significance: 3e-80; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 134 - 469
Target Start/End: Complemental strand, 391795 - 391458
Alignment:
Q  134 ttattgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacac 233  Q
    |||||||||||||||| || |||||| || ||  ||||||||||||| ||||||| ||||||| ||||||||| ||| |||||||| ||||| | |||||    
T  391795 ttattgttctggaccgaccaaaaggacctgtggtccatttacttaggtccaatacaatccaaaccccaaacaccacggttggcaaacttacttgcaacac 391696  T
Q  234 accccttccacgcgagggggg-tgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggtt 332  Q
    ||||||| | ||| ||||||| ||||| || |||  ||| |  ||||||||||||| |||||||||| | || ||||||||||||||||| | |||||||    
T  391695 acccctttcccgcaagggggggtgcacggagcgagcgagactagttcaaacgaaccacaacgtctctctgcaggttcccgcaataaactctctggcggtt 391596  T
Q  333 acacttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaa 432  Q
    ||||||||||  |||||||||||| ||| |  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||    
T  391595 acacttcccataatttcgtaaccgccagagccaggtgtgccattacaacggctctgcaaccctccacctctataaataggggactcatagcagtccccaa 391496  T
Q  433 ggtagaatc--tttcttcctctcaaaccctcactctctg 469  Q
    |||||||||  | ||||||||| ||||||||||||||||    
T  391495 ggtagaatctatctcttcctct-aaaccctcactctctg 391458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 138 - 467
Target Start/End: Complemental strand, 381092 - 380763
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    |||| |||||||||| ||||||  | || |||||||||||| ||||||||| ||||||||||||||||| | | |||||||| ||||| | | |||||||    
T  381092 tgttatggaccggccaaaaggacatgtggcccatttacttacgcccaatacaatccaaagcccaaacaccatggttggcaaacttacttgcaccacaccc 380993  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 337  Q
    ||| |  || |||||||||||| || |||  ||| | |||||||||||||| |||||||||| | || |||||||||||||| || | ||||||||||||    
T  380992 ctttcctgcaaggggggtgcacggagcgagcgagactggttcaaacgaaccacaacgtctctctacacgttcccgcaataaagtctctggcggttacact 380893  T
Q  338 tcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtag 437  Q
    || ||| |||||||||||  ||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||     
T  380892 tctcacaatttcgtaacctccagagccaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcatagcagtccccatggta- 380794  T
Q  438 aatc--tttcttcctctcaaaccctcactctc 467  Q
    ||||  | ||||||||| ||||||||||||||    
T  380793 aatctatctcttcctct-aaaccctcactctc 380763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 145; Significance: 4e-76; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 138 - 442
Target Start/End: Original strand, 29926 - 30230
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    ||||||||||||||| |||||| ||||| |||||||| |||||||||| || ||||||||||||||||  |||||||||||| ||||  | |||||||||    
T  29926 tgttctggaccggccaaaaggacctttggcccatttaattaggcccaacacaatccaaagcccaaacagcacgtttggcaaagttacatgcaacacaccc 30025  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 337  Q
    |||||| || |||| ||||||| || |||||||| | |||||||||||||| |||||||||| | || |||||||||||||| || | || |||||||||    
T  30026 cttccatgcaagggaggtgcacggagcgaaagagactggttcaaacgaaccacaacgtctctctacacgttcccgcaataaaatctctggaggttacact 30125  T
Q  338 tcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtag 437  Q
    |||||| |||||||||||  ||| |  |||||| || |||||| ||||||||||||||||||||||||||||| ||||||||  |||||||| |||||||    
T  30126 tcccacaatttcgtaaccaccagagccaggtgttccgttacaatggctctgcagccctccacctctataaatacgggactcacagcagtccctaaggtag 30225  T
Q  438 aatct 442  Q
    |||||    
T  30226 aatct 30230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 145; Significance: 4e-76; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 138 - 442
Target Start/End: Complemental strand, 69004 - 68700
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    ||||||| ||||||| |||||||||||| |||||||||||||||||||||| || ||||||||| || | |||||| |||| |||||| |  ||||||||    
T  69004 tgttctgaaccggccaaaaggatctttggcccatttacttaggcccaatacaattcaaagcccagactccacgttttgcaacattacttgcgacacaccc 68905  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 337  Q
    ||||   ||||||||||||||| || | |  ||| |  |||||||||| || ||||||||||| ||| ||||||||||||||||| |  |||||||||||    
T  68904 cttctctgcgaggggggtgcacggagcaaccgagactagttcaaacgagccacaacgtctcttcccacgttcccgcaataaactctctagcggttacact 68805  T
Q  338 tcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtag 437  Q
    ||||||||||||||||||| ||  | |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  ||||| ||||||||||    
T  68804 tcccacgatttcgtaaccgccaaagcaaggtgtgtcattacaacggctttgcagccctccacctctataaataggggactcaccgcagtgcccaaggtag 68705  T
Q  438 aatct 442  Q
    |||||    
T  68704 aatct 68700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 275 - 442
Target Start/End: Complemental strand, 75039 - 74872
Alignment:
Q  275 ggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacacttcccacgatttcgtaaccgtcagtgtaaggtgtgcca 374  Q
    ||||||||||| || |||||| |||   || ||||||||||||||||| | ||||||||||||||| |||||||| |||| | ||| |  ||||||||||    
T  75039 ggttcaaacgagccacaacgtgtctccgcacgttcccgcaataaactctctggcggttacacttccgacgatttcataactgccagagccaggtgtgcca 74940  T
Q  375 ttacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatct 442  Q
    ||||||||||||| |||||||||||||||||||||||||||||||  ||| |||||||||||||||||    
T  74939 ttacaacggctctacagccctccacctctataaataggggactcaccgcattccccaaggtagaatct 74872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 137; Significance: 2e-71; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 138 - 398
Target Start/End: Complemental strand, 19790606 - 19790346
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    |||| ||||| |||| |||||||| ||| |||||||||||||||||||||||||||||| |||||||||   |||||| ||| ||||| |  |||| |||    
T  19790606 tgttatggactggccaaaaggatcattggcccatttacttaggcccaataccatccaaaacccaaacaccgtgtttggtaaagttacttgcgacacgccc 19790507  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 337  Q
    ||||||  | ||||||||||||||| |||||||| | |||||||||||||| |||||||||| | || |||||| |||||||||| | | ||||||||||    
T  19790506 cttccagacaaggggggtgcacagagcgaaagagactggttcaaacgaaccacaacgtctctctgcacgttcccacaataaactctctgacggttacact 19790407  T
Q  338 tcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctcca 398  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  19790406 tcccacgatttcgtaaccgtcagagtcaggtgtgccattacaacggctctgcagccctcca 19790346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 138 - 444
Target Start/End: Original strand, 16852878 - 16853183
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    ||||||||||||||| ||||| | ||||  ||||| ||||||||||||||| ||||||||| ||||  | |||||||| || || ||| |  || ||||     
T  16852878 tgttctggaccggccaaaagggtttttggaccatt-acttaggcccaatacaatccaaagctcaaattccacgtttggtaacatcacttgcgacgcacca 16852976  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 337  Q
    | ||   ||||||| ||| ||| || |||  ||  ||||||||||| | || |||||||||| | || ||| ||||||||||||| | ||||||||||||    
T  16852977 cctctctgcgagggaggtacacggagcgagtgacaccggttcaaacaagccacaacgtctctctgcacgttaccgcaataaactctctggcggttacact 16853076  T
Q  338 tcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtag 437  Q
    ||||||||||||||||||| ||| |  |||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  16853077 tcccacgatttcgtaaccgccagagccaggtgtgccattacaacatatttgcagccctccacctctataaataggggactcaatgcagtccccaagggag 16853176  T
Q  438 aatcttt 444  Q
    |||||||    
T  16853177 aatcttt 16853183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 140 - 469
Target Start/End: Complemental strand, 22915379 - 22915051
Alignment:
Q  140 ttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacacccct 239  Q
    |||| |||||| | ||||||  |||| | |||||||||||||||||||| |||  |||| ||||||| ||||||| |||  ||||| | ||||||||||     
T  22915379 ttcttgaccggtcaaaaggacatttggctcatttacttaggcccaatacaatctgaagcgcaaacaccacgtttgacaagtttacttgcaacacaccccc 22915280  T
Q  240 tccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacacttc 339  Q
    | | ||| |||||  ||||| || |||  ||| |  ||||||||||| | |||||||||| | || ||||||||||||||||| |  || ||||||||||    
T  22915279 ttcccgcaagggg--tgcacggagcgagcgagactagttcaaacgaatcacaacgtctctcttcacgttcccgcaataaactctctagctgttacacttc 22915182  T
Q  340 ccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaa 439  Q
    |||||||||| |||||| | | |  | |||| ||||||||||||||||||||| |||||||| |||||||||||||||||  ||||||||||||||||||    
T  22915181 ccacgatttcataaccgccggagccaagtgtaccattacaacggctctgcagctctccacctttataaataggggactcatagcagtccccaaggtagaa 22915082  T
Q  440 tc--tttcttcctctcaaaccctcactctctg 469  Q
    ||  | ||||||||| ||||||||||||||||    
T  22915081 tctatctcttcctct-aaaccctcactctctg 22915051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 138 - 442
Target Start/End: Original strand, 3558990 - 3559291
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    |||| |||||||| |||||||||||| | ||||||||| ||| | |||||  |||||| ||||||| ||  | |||||||| |||||||| |||||||||    
T  3558990 tgttttggaccggtcgaaaggatcttaggcccatttacatagtctcaatattatccaa-gcccaaataccgcatttggcaacattactcgcaacacaccc 3559088  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 337  Q
    ||||| ||||| ||||||||||||| | || ||| |||||||||||||||  |||| ||||||  |||||||||||||    |||   || |||||||||    
T  3559089 cttccccgcga-gggggtgcacagagcaaacgagaccggttcaaacgaactgcaacatctcttcgcatgttcccgcaaatctctctttggaggttacact 3559187  T
Q  338 tcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtag 437  Q
    | ||||||||||||||| | |||    |  ||  ||||||||||||||||||||||  ||| ||||||| |||||||||||    |||| ||||||||||    
T  3559188 ttccacgatttcgtaactg-caggaacacatgaaccattacaacggctctgcagccacccatctctatatataggggactcttaacagttcccaaggtag 3559286  T
Q  438 aatct 442  Q
    |||||    
T  3559287 aatct 3559291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 167 - 469
Target Start/End: Complemental strand, 16915008 - 16914705
Alignment:
Q  167 cccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccccttccacgcgaggggggtgcacagaacga 266  Q
    |||||||||||||||||||||| |||| |  ||||||||| |||||||| ||| ||||| |  ||| ||||| ||  || |||||||||| || || | |    
T  16915008 cccatttacttaggcccaatacaatcccatacccaaacaccacgtttggaaaacttacttgcgacataccccctctccgtgaggggggtgaacggagcaa 16914909  T
Q  267 aagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacacttcccacgatttcgtaaccgtcagtgtaag 366  Q
     |  | ||||||||||||| || |||||||||||| || ||||||||||| |  || |    |||||||| ||||||||||||||||||| |||    |     
T  16914908 gaaggaccggttcaaacgagccgcaacgtctctttgcacgttcccgcaattatttctctactggttacacctcccacgatttcgtaaccgccagaccgat 16914809  T
Q  367 gtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatc--tttcttcctctcaaaccctcact 464  Q
     ||||||||||||| ||||||||||||||||||||||||| |||| || |||    |||||||||| | ||||||  | ||||||||  |||||||||||    
T  16914808 ctgtgccattacaatggctctgcagccctccacctctatatatagagggctcttaacagtccccaaagcagaatctatctcttcctc-aaaaccctcact 16914710  T
Q  465 ctctg 469  Q
    |||||    
T  16914709 ctctg 16914705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 167 - 393
Target Start/End: Complemental strand, 44636050 - 44635823
Alignment:
Q  167 cccatttacttaggcccaatacca-tccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccccttccacgcgaggggggtgcacagaacg 265  Q
    ||||||||||||||| |||||| | || ||||  |||| || | ||||| ||| |||||||| |||||||| ||||| ||||| |||| || || || |     
T  44636050 cccatttacttaggctcaatacaaatcgaaaggtcaaataccatgtttgacaacattactcgcaacacaccgcttccccgcgaaggggatgtacggagca 44635951  T
Q  266 aaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacacttcccacgatttcgtaaccgtcagtgtaa 365  Q
    |  ||| |  ||||||||||||  |||||||||||  || |||||||| |    ||| | ||||||||||||||||||||||||||||||| | |  | |    
T  44635950 agcgagactagttcaaacgaactacaacgtctcttcgcacgttcccgcgaatctctctctggcggttacacttcccacgatttcgtaaccgacggactca 44635851  T
Q  366 ggtgtgccattacaacggctctgcagcc 393  Q
     |||||||||||||||||||||||||||    
T  44635850 cgtgtgccattacaacggctctgcagcc 44635823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 371 - 443
Target Start/End: Complemental strand, 22006590 - 22006518
Alignment:
Q  371 gccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatctt 443  Q
    |||||||||||| ||||||||||||||||||||||| ||| |||||||   ||||||||||||||||||||||    
T  22006590 gccattacaacgactctgcagccctccacctctatatataagggactcgtagcagtccccaaggtagaatctt 22006518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 371 - 443
Target Start/End: Complemental strand, 22014107 - 22014035
Alignment:
Q  371 gccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatctt 443  Q
    |||||||||||| ||||||||||||||||||||||| ||| |||||||   ||||||||||||||||||||||    
T  22014107 gccattacaacgactctgcagccctccacctctatatataagggactcgtagcagtccccaaggtagaatctt 22014035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 388 - 468
Target Start/End: Complemental strand, 1998087 - 1998006
Alignment:
Q  388 gcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatctttcttcctctc-aaaccctcactctct 468  Q
    ||||| |||||||||||||||||||| |||||| ||||||||||||||||||||| |||   |||| |||||||||||||||    
T  1998087 gcagctctccacctctataaatagggtactcaaagcagtccccaaggtagaatctgtctctgtctctaaaccctcactctct 1998006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 394 - 469
Target Start/End: Complemental strand, 19773462 - 19773385
Alignment:
Q  394 ctccacctctataaataggggactcaatgcagtccccaaggtagaatc--tttcttcctctcaaaccctcactctctg 469  Q
    ||||||||||||||||||| ||||||  ||||||||||||||||||||  | |||||||   ||||||||||||||||    
T  19773462 ctccacctctataaataggagactcacagcagtccccaaggtagaatctatctcttccttctaaaccctcactctctg 19773385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 138 - 205
Target Start/End: Original strand, 31530488 - 31530555
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaaca 205  Q
    ||||||||||||||| |||| ||||||| ||||||||||||| ||||||||  | ||||| |||||||    
T  31530488 tgttctggaccggccaaaagaatctttgacccatttacttagacccaatacactacaaagtccaaaca 31530555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 242
Target Start/End: Original strand, 13016462 - 13016537
Alignment:
Q  167 cccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccccttcc 242  Q
    |||||||||||||||||| ||| |  | ||||||||| |||||||||||||| ||||   | ||||||||||||||    
T  13016462 cccatttacttaggcccagtacaaatccaagcccaaatacaacgtttggcaacattatgtgcaacacaccccttcc 13016537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 320 - 442
Target Start/End: Complemental strand, 3786681 - 3786560
Alignment:
Q  320 ctcacaggcggttacacttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactca 419  Q
    ||||| |||||||||||||||||| ||||||||||||   |    | |||||||  || ||||||||||||  |  ||||||||||| | |||||||||     
T  3786681 ctcactggcggttacacttcccacaatttcgtaaccgcgggacacatgtgtgcc-gtataacggctctgcaaacacccacctctatataaaggggactcc 3786583  T
Q  420 atgcagtccccaaggtagaatct 442  Q
      |||||||||||||||||||||    
T  3786582 tcgcagtccccaaggtagaatct 3786560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 262
Target Start/End: Original strand, 36602466 - 36602511
Alignment:
Q  217 aaaattactcgtaacacaccccttccacgcgaggggggtgcacaga 262  Q
    ||||||||||| |||||||||||||  |||||||||||||| ||||    
T  36602466 aaaattactcgcaacacaccccttctccgcgaggggggtgctcaga 36602511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 36639696 - 36639651
Alignment:
Q  367 gtgtgccattacaacggctctgcagccctccacctctataaatagg 412  Q
    ||||||||||||||||||||||||  |  |||||||||||||||||    
T  36639696 gtgtgccattacaacggctctgcattcacccacctctataaatagg 36639651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 355
Target Start/End: Original strand, 1694130 - 1694194
Alignment:
Q  291 aacgtctctttccatgttcccgcaataaactcacaggcggttacacttcccacgatttcgtaacc 355  Q
    ||||||||||||||||||||||| ||   || || | |||||||||||||| ||||||| |||||    
T  1694130 aacgtctctttccatgttcccgcgattctcttactgacggttacacttccctcgatttcataacc 1694194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 136; Significance: 9e-71; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 140 - 468
Target Start/End: Complemental strand, 243002 - 242673
Alignment:
Q  140 ttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacacccct 239  Q
    ||||| ||||||| |||||| |||||||||||||||||||||||||||| ||| ||||||||||||| | ||||||||| |||||| |  ||||||||||    
T  243002 ttctgtaccggccaaaaggacctttgtcccatttacttaggcccaatacaatctaaagcccaaacaccaagtttggcaacattacttgcgacacacccct 242903  T
Q  240 tccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacacttc 339  Q
    ||| ||  ||| |||||||| || |||   || |||||||||||||||| |||||||||||| || |||||||||||||||||   ||| ||||||||||    
T  242902 tccccgataggcgggtgcacggagcgagcaagaccggttcaaacgaaccacaacgtctctttgcacgttcccgcaataaactctttggcagttacacttc 242803  T
Q  340 ccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaa 439  Q
    |||||||| ||||||||  || |  ||||||||||||||||||||||||| |||||||||||||||| |||| | ||||| | ||||||||| | |||||    
T  242802 ccacgattacgtaaccgcaagagccaggtgtgccattacaacggctctgccgccctccacctctatatatagagtactcacttcagtccccaggatagaa 242703  T
Q  440 tct--ttcttcctctcaaaccctcactctct 468  Q
    |||   ||||||||| ||| |||||||||||    
T  242702 tctaactcttcctct-aaatcctcactctct 242673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 138 - 469
Target Start/End: Complemental strand, 253644 - 253312
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    |||| ||||| |||| |||| | ||||| ||||||| |||||||||||||| ||||||| ||||||||| ||||||||||| |||||  |  ||||||||    
T  253644 tgttttggacaggccaaaagaacctttggcccattttcttaggcccaatacaatccaaatcccaaacaccacgtttggcaacattacgtgcgacacaccc 253545  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 337  Q
    ||||| || |||||| |||||| ||  |    || |||||||||| ||||| |||| ||||| | || ||||||||||||||||| | ||| ||||||||    
T  253544 cttccccgagaggggagtgcacggagagtgcaagaccggttcaaatgaaccacaacatctctctgcacgttcccgcaataaactctctggcagttacact 253445  T
Q  338 tcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtag 437  Q
    ||||||||||||||||||| ||| |  |||||||||||||||||| || ||||||| ||||||| |||| |||||||||||| | |||||||||||||||    
T  253444 tcccacgatttcgtaaccgccagagccaggtgtgccattacaacgactttgcagccgtccacctttatatataggggactcactacagtccccaaggtag 253345  T
Q  438 aatct--ttcttcctctcaaaccctcactctctg 469  Q
    |||||   ||||||||| ||||| ||||||||||    
T  253344 aatctaactcttcctct-aaaccgtcactctctg 253312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 131; Significance: 9e-68; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 138 - 465
Target Start/End: Original strand, 909 - 1237
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    ||||||||||||| | |||||| ||||| |||||||||||||| ||||||| ||||||||||||||||| |||||| ||||| ||||| | | || ||||    
T  909 tgttctggaccggtcaaaaggacctttggcccatttacttaggtccaatacaatccaaagcccaaacaccacgtttagcaaacttacttgcagcataccc 1008  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 337  Q
    ||||  | ||| |||||||||| || |||  ||| | |||||||||||||| |||||| ||| | |||||||| |||||||||||   ||||||||||||    
T  1009 cttctccacgaagggggtgcacggagcgagcgagactggttcaaacgaaccacaacgtttctctgcatgttcctgcaataaactctatggcggttacact 1108  T
Q  338 tcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtag 437  Q
    |||||||||||||||| ||  || |  |||||| |||||||||||||| || ||||||||||||||||||||||||||||||  |||||| |||| ||||    
T  1109 tcccacgatttcgtaatcgctagagccaggtgttccattacaacggctatgtagccctccacctctataaataggggactcacagcagtctccaacgtag 1208  T
Q  438 aatc--tttcttcctctcaaaccctcactc 465  Q
    ||||  | ||||||||| ||||||||||||    
T  1209 aatctatctcttcctct-aaaccctcactc 1237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 130; Significance: 4e-67; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 142 - 468
Target Start/End: Original strand, 151164 - 151490
Alignment:
Q  142 ctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccccttc 241  Q
    ||||||||||| |||||||||||| |||||||||||||||| ||||| ||||||||||||||||| |||||||||||| ||||| | | || ||||||||    
T  151164 ctggaccggccaaaaggatctttggcccatttacttaggcctaatacaatccaaagcccaaacactacgtttggcaaacttacttgcagcataccccttc 151263  T
Q  242 cacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacacttccc 341  Q
    | | | | |||||||||| || |||  ||| ||| |||||||||||| |||||||||| |  | ||||| ||||||||||| | ||| ||| ||||||||    
T  151264 cccacaaagggggtgcacggagcgagcgagaccgattcaaacgaaccacaacgtctctctgtacgttcctgcaataaactctctggc-gtttcacttccc 151362  T
Q  342 acgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatc 441  Q
    |||||||||||||||  || |  |||| | ||| ||||||||||||||||||||||||||||||||||||||||||||  ||| |||| |||||||||||    
T  151363 acgatttcgtaaccgctagagccaggtcttccactacaacggctctgcagccctccacctctataaataggggactcacagcattccctaaggtagaatc 151462  T
Q  442 --tttcttcctctcaaaccctcactctct 468  Q
      | ||||||| | |||||||||||||||    
T  151463 tatctcttcct-ttaaaccctcactctct 151490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 128; Significance: 6e-66; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 138 - 440
Target Start/End: Original strand, 16185 - 16487
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    |||||||||| |||| |||||| |||||  ||||||||||||||||||||| | ||||||||||||||| | |||||| ||| ||||  |  ||||||||    
T  16185 tgttctggactggccaaaaggacctttggtccatttacttaggcccaatacaacccaaagcccaaacactatgtttggaaaagttacatgcgacacaccc 16284  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 337  Q
    ||| | | | |||||| ||||| || |||| ||| | |||||||||||||| |||| ||||| | || ||||||||||||||||| | || |||||||||    
T  16285 ctttcccacaaggggg-tgcacggagcgaatgagactggttcaaacgaaccacaacatctctctgcacgttcccgcaataaactctctggtggttacact 16383  T
Q  338 tcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagt-ccccaaggta 436  Q
    ||||||||||| ||||||| ||| |  |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  16384 tcccacgattttgtaaccgccagagccaggtgtaccattacaatggctctgcagccctccacctctataaataggggactcaaagcagtcccccaaggta 16483  T
Q  437 gaat 440  Q
    ||||    
T  16484 gaat 16487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 128; Significance: 6e-66; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 248 - 468
Target Start/End: Original strand, 47394 - 47615
Alignment:
Q  248 aggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacacttcccacgatt 347  Q
    |||||||||||| || |||||||| | |||||||||||||| |||||||||| | || ||||||||||||||||| | |||||||||||||||||| |||    
T  47394 aggggggtgcacggagcgaaagagactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctctggcggttacacttcccacaatt 47493  T
Q  348 tcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatc--tttc 445  Q
    | ||||||| ||| |  | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  | ||    
T  47494 ttgtaaccgccagagccaagtgtgccattacaacggctctgcagccctccacctctataaataggggactcaaagcagtccccaaggtagaatctatctc 47593  T
Q  446 ttcctctcaaaccctcactctct 468  Q
    ||||||| |||||||||||||||    
T  47594 ttcctct-aaaccctcactctct 47615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 154 - 241
Target Start/End: Original strand, 56243 - 56330
Alignment:
Q  154 aaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccccttc 241  Q
    |||||| ||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||| || ||||| |  ||||||||||||    
T  56243 aaaggacctttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcgaagttacttgcgacacaccccttc 56330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 123; Significance: 5e-63; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 138 - 469
Target Start/End: Original strand, 4065 - 4397
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    ||||||||||||||| ||||||| |||| | |||||||||||| | ||||| |||||||| |||||||| |||||||||||| ||||| | | || ||||    
T  4065 tgttctggaccggccaaaaggatatttggctcatttacttaggtcaaatacaatccaaagtccaaacaccacgtttggcaaacttacttgcagcataccc 4164  T
Q  238 cttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 337  Q
    ||||  | ||| |||||| ||| || |||  | | |||||||||||||||| |||||||| | | || |||| |||||||||||| |  || |||||||     
T  4165 cttctccacgaagggggttcacggagcgagcgggaccggttcaaacgaaccacaacgtctatctgcacgttctcgcaataaactctctcgcagttacaca 4264  T
Q  338 tcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtag 437  Q
    ||||||||||||||||||  ||| |  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||   |||||||||||  ||    
T  4265 tcccacgatttcgtaaccaccagagccaggtgtgccactacaacggctctgcagccctccacctctataaataggggactcacatcagtccccaagagag 4364  T
Q  438 aatc--tttcttcctctcaaaccctcactctctg 469  Q
    ||||  | ||||||||| ||||||||||||||||    
T  4365 aatctatctcttcctct-aaaccctcactctctg 4397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0989 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0989
Description:

Target: scaffold0989; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 190 - 468
Target Start/End: Original strand, 1444 - 1721
Alignment:
Q  190 atccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccccttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccc 289  Q
    ||||||||||||||||| ||||||||| || ||||| |  ||||| ||||||| | | |||||  ||||| || |||||||| | ||||||||||||||     
T  1444 atccaaagcccaaacaccacgtttggcgaagttacttgcgacacatcccttccccacaagggg--tgcacggagcgaaagagactggttcaaacgaacca 1541  T
Q  290 caacgtctctttccatgttcccgcaataaactcacaggcggttacacttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgc 389  Q
    |||| ||||| | || ||||||||||||||||| | |||||||||||||| ||||||||  |||| |  || |  ||||||||||||||||| ||||| |    
T  1542 caacatctctctacacgttcccgcaataaactctctggcggttacacttctcacgattttataactgctagagccaggtgtgccattacaacagctctac 1641  T
Q  390 agccctccacctctataaataggggactcaatgcagtccccaaggtagaatc--tttcttcctctcaaaccctcactctct 468  Q
    |||| ||||||||||||||||||| |||||| ||||||||||||||||||||  | ||||||||| |||||||||||||||    
T  1642 agccgtccacctctataaatagggcactcaaagcagtccccaaggtagaatctatctcttcctct-aaaccctcactctct 1721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 135 - 469
Target Start/End: Complemental strand, 12654 - 12322
Alignment:
Q  135 tattgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacaca 234  Q
    |||||||||||||||||| |||||| ||||| |||||||||||||||| ||||| || |||||||||||||| |||||| |||| |||||| |  |||||    
T  12654 tattgttctggaccggccaaaaggagctttggcccatttacttaggcctaatacaattcaaagcccaaacaccacgttttgcaacattacttgcgacaca 12555  T
Q  235 ccccttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttac 334  Q
    ||| |||  |||||||||  |||||||| ||||  || |||||| ||| || || |||||||| |   || ||||||||||||| ||| |  ||||||||    
T  12554 cccattctccgcgagggga-tgcacagagcgaacaagaccggtttaaatgagccacaacgtctgtg--cacgttcccgcaataatctctctagcggttac 12458  T
Q  335 acttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaagg 434  Q
    |||||||| ||||| ||||||| ||| |   |||||||||||||||||||||||||||||| |||||||||| ||||||||||||   ||  ||||||||    
T  12457 acttcccatgattttgtaaccgccagagcctggtgtgccattacaacggctctgcagcccttcacctctatatataggggactcataacaaaccccaagg 12358  T
Q  435 tagaatct--ttcttcctctcaaaccctcactctctg 469  Q
    || |||||   | ||||||| ||||||||||||||||    
T  12357 tataatctaactattcctct-aaaccctcactctctg 12322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 100; Significance: 3e-49; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 216 - 467
Target Start/End: Complemental strand, 1861 - 1609
Alignment:
Q  216 caaaattactcgtaacacaccccttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaa 315  Q
    |||| ||||| | |||| ||||||||||| | |||||| ||| | || ||||||||   |||||||||||||| |||||||||| | || ||||||||||    
T  1861 caaagttacttgcaacataccccttccacacaaggggg-tgcccggagcgaaagagattggttcaaacgaaccacaacgtctctctgcacgttcccgcaa 1763  T
Q  316 taaa-ctcacaggcggttacacttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaatagggg 414  Q
    |||| ||| | ||||||||||||||||||||||||||||||| ||| |  | || |||||||||||||||||||||||| ||||||||||||||||||||    
T  1762 taaaactctctggcggttacacttcccacgatttcgtaaccgccagagccaagtatgccattacaacggctctgcagccatccacctctataaatagggg 1663  T
Q  415 actcaatgcagtccccaaggtagaatc--tttcttcctctcaaaccctcactctc 467  Q
    |||||   |||||||||| ||||||||  | ||||||||| ||||||||||||||    
T  1662 actcacaacagtccccaatgtagaatctatctcttcctct-aaaccctcactctc 1609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 317 - 469
Target Start/End: Complemental strand, 15517 - 15364
Alignment:
Q  317 aaactcacaggcggttacacttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggac 416  Q
    |||||| | ||||||||||||||||||||||| ||||||| ||| || |||  ||||||| |||||||||||||||||||||||||||||||||||||||    
T  15517 aaactctctggcggttacacttcccacgatttagtaaccgccagagtcaggcatgccattgcaacggctctgcagccctccacctctataaataggggac 15418  T
Q  417 tcaatgcagtccccaaggtagaatc--tttcttcctctcaaaccctcactctctg 469  Q
    |||   ||||||||  |||||||||  | ||||||||| ||||||||||||||||    
T  15417 tcataacagtccccgcggtagaatctatctcttcctct-aaaccctcactctctg 15364  T

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Target: scaffold0058; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 244
Target Start/End: Complemental strand, 15601 - 15524
Alignment:
Q  167 cccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccccttccac 244  Q
    |||||||||||| ||||||||| || | |||| ||||||   ||||||||||| ||||| | |||| |||||||||||    
T  15601 cccatttacttatgcccaatacaataccaagctcaaacaacgcgtttggcaaagttacttgcaacataccccttccac 15524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 135 - 441
Target Start/End: Original strand, 37092 - 37397
Alignment:
Q  135 tattgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacaca 234  Q
    |||||||||||||||| | |||||| ||||| ||||||||||||||| |||||| ||||||| |  ||| || ||||||||||   ||||| |  |||||    
T  37092 tattgttctggaccggtcaaaaggagctttgacccatttacttaggctcaatacaatccaaatctaaaataccacgtttggcagtgttacttgcgacaca 37191  T
Q  235 ccccttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttac 334  Q
    |||||||  |||||  |||||||||||| | |   || ||| ||||||| |||| |||||||||| | |||||||| ||||||| ||| | | |||||||    
T  37192 ccccttctccgcgacaggggtgcacagagcaagcaagaccgattcaaacaaaccgcaacgtctctctgcatgttcctgcaataatctctctg-cggttac 37290  T
Q  335 acttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaagg 434  Q
    ||||||||||||||| |||||| ||| |   || ||||||| |||||||||||||||||||||||||||||| |||||||||||   ||||||| ||||     
T  37291 acttcccacgatttcataaccgccagagcctggcgtgccatcacaacggctctgcagccctccacctctatatataggggactcgtggcagtccgcaaga 37390  T
Q  435 tagaatc 441  Q
    |||||||    
T  37391 tagaatc 37397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 138 - 442
Target Start/End: Original strand, 2697 - 3002
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccc 237  Q
    |||| ||||||| || |||||| ||||| ||||||||| |||||| ||||| || |||||||||||||| |  |||||||| |||||| |  ||||| ||    
T  2697 tgttttggaccgaccaaaaggagctttggcccatttacataggcctaatacaattcaaagcccaaacaccatctttggcaacattacttgctacacaacc 2796  T
Q  238 cttccacgcgagggg--ggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttaca 335  Q
    ||||   ||||||||  ||||||| || ||||  || |||||||||||||| | ||| |||||| | || ||||| | ||||| ||| |  |||||||||    
T  2797 cttctctgcgaggggggggtgcacggagcgaacaagaccggttcaaacgaaacacaatgtctctctgcacgttccagtaataatctctctagcggttaca 2896  T
Q  336 cttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggt 435  Q
    ||||||||||||||||||||| ||| |   |||||||||||||||| |||||||||| ||||||||||||| ||| ||||||||   ||||||| |||||    
T  2897 cttcccacgatttcgtaaccgccagagcctggtgtgccattacaacagctctgcagctctccacctctatatata-gggactcataacagtcccgaaggt 2995  T
Q  436 agaatct 442  Q
    |||||||    
T  2996 agaatct 3002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 81; Significance: 6e-38; HSPs: 3)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 154 - 418
Target Start/End: Original strand, 36665 - 36928
Alignment:
Q  154 aaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccccttccacgcgaggggg 253  Q
    |||||||||| ||||||||| |||||| ||||||| |||||| ||||||| || ||||||||||| |||||||| |||||||||||||| |||||  | |    
T  36665 aaaggatcttagtcccattttcttaggtccaatacaatccaa-gcccaaataccacgtttggcaacattactcgcaacacaccccttccccgcgaacgag 36763  T
Q  254 gtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacacttcccacgatttcgtaa 353  Q
     |||||||| | |  |||  | ||||||||||||  |||||||||||  || ||||||||||    |||   || ||||||||||||||| |||||||||    
T  36764 atgcacagagcaagcgagaacagttcaaacgaactgcaacgtctcttcgcaagttcccgcaaatctctctttggaggttacacttcccacaatttcgtaa 36863  T
Q  354 ccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactc 418  Q
    ||||| |    | ||||||||||||||||||||| |||||  ||||||||||| |||||||||||    
T  36864 ccgtcggacacacgtgtgccattacaacggctctacagccacccacctctatatataggggactc 36928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 418
Target Start/End: Original strand, 49284 - 49375
Alignment:
Q  327 gcggttacacttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactc 418  Q
    ||||||||||||||||||||||||||||| |  |    |  ||||||||||||||||||||||| ||  ||||||||||| |||||||||||    
T  49284 gcggttacacttcccacgatttcgtaaccattggacacacatgtgccattacaacggctctgcatccacccacctctatatataggggactc 49375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 259
Target Start/End: Original strand, 49133 - 49217
Alignment:
Q  175 cttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccccttccacgcg-aggggggtgcac 259  Q
    |||||||||||||| ||| || ||| ||| || ||||||||||| |||||||  |||||||||||||| |||| ||||||||||||    
T  49133 cttaggcccaatacaatcgaa-gccaaaataccacgtttggcaacattactcacaacacaccccttccccgcgaaggggggtgcac 49217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 365 - 468
Target Start/End: Complemental strand, 19254 - 19150
Alignment:
Q  365 aggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatc--tttcttcctctcaaaccctca 462  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  | ||||||||| ||| |||||    
T  19254 aggtgtgccgttacaatggctctgcagccctccacctctataaataggggactcactgcagtccccaaggtagaatctatctcttcctct-aaatcctca 19156  T
Q  463 ctctct 468  Q
    ||||||    
T  19155 ctctct 19150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 64; Significance: 9e-28; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 137 - 356
Target Start/End: Complemental strand, 9462 - 9247
Alignment:
Q  137 ttgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacacc 236  Q
    ||||| |||||||||| | ||||  |||| ||||||||||| || ||||||| || |||||||||||||| |||||||||||||||||| |  |||||||    
T  9462 ttgttatggaccggcctagaggagttttggcccatttacttgggtccaatactattcaaagcccaaacaccacgtttggcaaaattacttgcgacacacc 9363  T
Q  237 ccttccacgcgaggggggtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcgg-ttaca 335  Q
    |||| | ||||| |  ||||||| || |    ||| | |||||||||||||| |||||||||| | || ||||| ||||||||||| |  |||| |||||    
T  9362 cctttcccgcga-gcaggtgcacggagc----gagactggttcaaacgaaccacaacgtctctctgcacgttcctgcaataaactctctagcggtttaca 9268  T
Q  336 cttcccacgatttcgtaaccg 356  Q
    |||||||| ||||||||||||    
T  9267 cttcccacaatttcgtaaccg 9247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1272 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 137 - 240
Target Start/End: Complemental strand, 2075 - 1972
Alignment:
Q  137 ttgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacacc 236  Q
    |||||||||||||||| ||||||  |||| ||||||||||| || ||||||| || |||||||||||||| |||||||||||||||||| |  |||||||    
T  2075 ttgttctggaccggccaaaaggagttttggcccatttacttgggtccaatactattcaaagcccaaacaccacgtttggcaaaattacttgcgacacacc 1976  T
Q  237 cctt 240  Q
    ||||    
T  1975 cctt 1972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 331 - 469
Target Start/End: Original strand, 86424 - 86563
Alignment:
Q  331 ttacacttcccacgatttcgtaaccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcccc 430  Q
    |||||||| |||||||||||||| || ||| |    |||||||||||||||| || |||| ||||||||||||||| ||||||||||||  ||||||||     
T  86424 ttacactttccacgatttcgtaatcgccagagcctagtgtgccattacaacgactttgcaaccctccacctctatatataggggactcatagcagtcccg 86523  T
Q  431 aaggtagaatc--tttcttcctctcaaaccctcactctctg 469  Q
    ||| |||||||  ||||||||||| |||| |||||||||||    
T  86524 aagatagaatctatttcttcctct-aaactctcactctctg 86563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 154 - 440
Target Start/End: Original strand, 20170 - 20455
Alignment:
Q  154 aaaggatctttgtcccatttacttaggcccaataccatccaaagcccaaacacaacgtttggcaaaattactcgtaacacaccccttccacgcgaggggg 253  Q
    ||||| |||| | |||||||||  |||  |||||| ||||||| |||||| || |||||||| || |||||| || ||||||||||||  ||||| ||||    
T  20170 aaagggtcttaggcccatttaccgaggagcaatacaatccaaa-cccaaataccacgtttggaaatattacttgtgacacaccccttcatcgcgaagggg 20268  T
Q  254 gtgcacagaacgaaagaggccggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcacaggcggttacacttcccacgatttcgtaa 353  Q
    |||| |||| | |  ||| || ||| ||||||  |  || ||||||   |||| |||| |||| |  || |  ||||||||||||||||| |||| ||||    
T  20269 gtgcgcagagcaagcgagaccagtttaaacgagtcataatgtctctcaacatgctcccacaattatttctctagcggttacacttcccacaattttgtaa 20368  T
Q  354 ccgtcagtgtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaat 440  Q
    |||   |    | |||| ||||||||||||||||||||||||||||||||| |||||||||||||    ||||||||||||||||||    
T  20369 ccgcttgacccaagtgtaccattacaacggctctgcagccctccacctctaaaaataggggactcttaacagtccccaaggtagaat 20455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 138 - 198
Target Start/End: Complemental strand, 18307 - 18247
Alignment:
Q  138 tgttctggaccggccgaaaggatctttgtcccatttacttaggcccaataccatccaaagc 198  Q
    |||| |||||||||| |||||| ||||| |||||||||||||||| ||||| || ||||||    
T  18307 tgttttggaccggccaaaaggacctttggcccatttacttaggccaaatactattcaaagc 18247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 320 - 356
Target Start/End: Original strand, 16044 - 16080
Alignment:
Q  320 ctcacaggcggttacacttcccacgatttcgtaaccg 356  Q
    ||||| |||||||||||||||||||||||||||||||    
T  16044 ctcaccggcggttacacttcccacgatttcgtaaccg 16080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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