View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7401_low_19 (Length: 265)
Name: NF7401_low_19
Description: NF7401
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7401_low_19 |
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Alignment Details
Target: chr7 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 45954069 - 45954304
Alignment:
| Q |
1 |
gcagaagagcagtaaatgaacctgacatttagaaccaacatttaattataaacaaaatggagcgtataaaatctttacaatgacagtgcata--tcaagt |
98 |
Q |
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| T |
45954069 |
gcagaagagcagtaaatgaacctgacatttagaaccaacatttaattataaacaaaatggagcgtataaaatctttacaatgacagtgcatagatcaagt |
45954168 |
T |
|
| Q |
99 |
atatcctaaaaatttgttttcttatttgtgtaatcaaagtcattcttaaacataattaactaatcacttgttaatgaatagaccaatgacaattgcattt |
198 |
Q |
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| T |
45954169 |
atatcctaaaaattt------------gtgtaatcaaagtcattcttaaacataattaactaatcacttgttaatgaatagaccaatgacaattgcattt |
45954256 |
T |
|
| Q |
199 |
atatttgaaatagacttttataatacatcagaaaaactattgctactg |
246 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45954257 |
atatttgaaatagacttttataatacatcagaaaaactattgctactg |
45954304 |
T |
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