View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7401_low_25 (Length: 223)

Name: NF7401_low_25
Description: NF7401
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7401_low_25
NF7401_low_25
[»] chr1 (58 HSPs)
chr1 (5-205)||(30476687-30476887)
chr1 (3-205)||(31658965-31659167)
chr1 (24-205)||(28220465-28220646)
chr1 (4-205)||(49918077-49918278)
chr1 (24-205)||(28223660-28223841)
chr1 (1-205)||(10924948-10925152)
chr1 (1-205)||(44454884-44455089)
chr1 (17-205)||(1833263-1833451)
chr1 (5-205)||(3156596-3156795)
chr1 (4-205)||(3206713-3206916)
chr1 (4-165)||(13598711-13598873)
chr1 (4-195)||(21536195-21536385)
chr1 (17-195)||(29652095-29652273)
chr1 (4-165)||(3282018-3282179)
chr1 (2-205)||(13316557-13316761)
chr1 (2-205)||(20762397-20762601)
chr1 (61-205)||(37503793-37503937)
chr1 (16-165)||(37070078-37070228)
chr1 (4-165)||(13604247-13604408)
chr1 (99-205)||(3189154-3189260)
chr1 (99-205)||(3197971-3198077)
chr1 (4-95)||(37033636-37033727)
chr1 (16-198)||(4552883-4553076)
chr1 (1-95)||(193119-193213)
chr1 (43-195)||(26644561-26644713)
chr1 (17-205)||(46064659-46064847)
chr1 (102-205)||(37560108-37560211)
chr1 (3-73)||(29135777-29135847)
chr1 (3-94)||(13547657-13547747)
chr1 (3-94)||(13549568-13549658)
chr1 (1-73)||(11348226-11348298)
chr1 (3-73)||(37879480-37879550)
chr1 (132-205)||(13138213-13138286)
chr1 (141-205)||(28265805-28265869)
chr1 (141-205)||(50167427-50167491)
chr1 (17-205)||(15820048-15820236)
chr1 (141-198)||(50169456-50169513)
chr1 (141-205)||(777095-777159)
chr1 (11-94)||(16455381-16455464)
chr1 (128-166)||(9022655-9022693)
chr1 (110-195)||(47098555-47098640)
chr1 (110-195)||(47102569-47102654)
chr1 (121-205)||(197147-197232)
chr1 (140-205)||(23555504-23555569)
chr1 (141-205)||(45644594-45644658)
chr1 (158-205)||(834406-834453)
chr1 (115-205)||(51765234-51765324)
chr1 (4-75)||(3189078-3189151)
chr1 (4-75)||(3197895-3197968)
chr1 (140-205)||(3847360-3847425)
chr1 (16-101)||(22819806-22819891)
chr1 (140-196)||(40122446-40122502)
chr1 (115-176)||(40282222-40282284)
chr1 (110-195)||(32889720-32889805)
chr1 (140-205)||(8551026-8551091)
chr1 (141-194)||(8871310-8871363)
chr1 (48-148)||(19365965-19366065)
chr1 (61-94)||(45940747-45940780)
[»] chr7 (63 HSPs)
chr7 (3-205)||(2761541-2761743)
chr7 (1-205)||(18126369-18126573)
chr7 (1-205)||(47676375-47676579)
chr7 (1-182)||(47674205-47674386)
chr7 (4-205)||(14070072-14070274)
chr7 (4-205)||(14380100-14380302)
chr7 (2-205)||(4585887-4586090)
chr7 (9-205)||(1113389-1113586)
chr7 (4-205)||(23554767-23554969)
chr7 (50-205)||(30024971-30025126)
chr7 (4-165)||(2647321-2647483)
chr7 (2-195)||(46515930-46516120)
chr7 (2-205)||(24514999-24515203)
chr7 (1-205)||(48491303-48491508)
chr7 (13-205)||(26417050-26417245)
chr7 (2-205)||(48489156-48489360)
chr7 (16-165)||(21989219-21989368)
chr7 (17-165)||(49092000-49092150)
chr7 (17-205)||(4178516-4178704)
chr7 (12-205)||(4538779-4538983)
chr7 (2-205)||(29990780-29990984)
chr7 (1-205)||(31733208-31733393)
chr7 (2-205)||(35853638-35853844)
chr7 (4-195)||(33332074-33332265)
chr7 (16-139)||(21983580-21983703)
chr7 (1-96)||(27347648-27347743)
chr7 (14-195)||(44847760-44847940)
chr7 (78-205)||(43864043-43864173)
chr7 (17-165)||(79699-79849)
chr7 (4-165)||(4796293-4796455)
chr7 (14-165)||(2479647-2479798)
chr7 (1-95)||(6360479-6360573)
chr7 (16-204)||(6570333-6570522)
chr7 (111-205)||(19502013-19502107)
chr7 (4-125)||(47263995-47264115)
chr7 (2-116)||(19495696-19495811)
chr7 (92-152)||(2759071-2759131)
chr7 (3-95)||(32358403-32358495)
chr7 (3-73)||(2389801-2389871)
chr7 (17-96)||(496342-496421)
chr7 (144-203)||(4253771-4253830)
chr7 (14-64)||(43863999-43864049)
chr7 (48-176)||(25767222-25767349)
chr7 (141-205)||(12098111-12098175)
chr7 (141-205)||(41317686-41317750)
chr7 (141-205)||(36146661-36146725)
chr7 (128-195)||(3047536-3047603)
chr7 (115-205)||(39731215-39731305)
chr7 (140-205)||(24526136-24526201)
chr7 (140-205)||(38671461-38671526)
chr7 (141-205)||(31105632-31105696)
chr7 (81-176)||(48408608-48408702)
chr7 (110-195)||(20284371-20284456)
chr7 (45-95)||(29608292-29608342)
chr7 (149-207)||(36574753-36574811)
chr7 (18-95)||(3050492-3050569)
chr7 (141-182)||(23565322-23565363)
chr7 (141-205)||(8153194-8153258)
chr7 (121-195)||(2580671-2580744)
chr7 (32-148)||(18409102-18409218)
chr7 (140-205)||(31518659-31518724)
chr7 (90-122)||(2759009-2759041)
chr7 (148-176)||(43504416-43504444)
[»] chr5 (55 HSPs)
chr5 (1-205)||(13487928-13488132)
chr5 (5-205)||(42426474-42426674)
chr5 (4-205)||(32636551-32636753)
chr5 (1-164)||(19806131-19806294)
chr5 (1-205)||(533506-533698)
chr5 (45-205)||(42428669-42428829)
chr5 (4-205)||(13239480-13239681)
chr5 (2-205)||(25412487-25412691)
chr5 (2-198)||(13342786-13342983)
chr5 (2-198)||(37438871-37439070)
chr5 (45-205)||(30683159-30683319)
chr5 (16-195)||(11916608-11916787)
chr5 (58-205)||(28750894-28751042)
chr5 (2-177)||(30182313-30182490)
chr5 (2-205)||(36074283-36074487)
chr5 (16-195)||(12083814-12083992)
chr5 (16-163)||(14520543-14520690)
chr5 (23-205)||(16649861-16650044)
chr5 (3-95)||(27015041-27015133)
chr5 (4-165)||(9352959-9353118)
chr5 (16-108)||(16650958-16651050)
chr5 (14-165)||(36931984-36932134)
chr5 (12-95)||(5057567-5057650)
chr5 (1-73)||(535628-535700)
chr5 (131-198)||(39468795-39468862)
chr5 (24-165)||(11181474-11181618)
chr5 (4-94)||(31004777-31004868)
chr5 (24-95)||(38746535-38746606)
chr5 (86-153)||(535693-535760)
chr5 (1-73)||(39468903-39468975)
chr5 (24-205)||(42926641-42926822)
chr5 (45-165)||(15464845-15464965)
chr5 (140-205)||(5887655-5887720)
chr5 (61-176)||(10593050-10593166)
chr5 (110-165)||(17003689-17003745)
chr5 (115-176)||(9789485-9789546)
chr5 (115-176)||(16409321-16409382)
chr5 (115-176)||(18441909-18441970)
chr5 (115-176)||(26170620-26170681)
chr5 (152-205)||(537901-537954)
chr5 (132-205)||(16451937-16452010)
chr5 (32-176)||(26177647-26177790)
chr5 (140-205)||(31182837-31182902)
chr5 (133-176)||(29720228-29720271)
chr5 (24-205)||(42310174-42310354)
chr5 (115-176)||(29722370-29722431)
chr5 (149-205)||(3075897-3075953)
chr5 (37-73)||(40146822-40146858)
chr5 (133-176)||(29751421-29751464)
chr5 (158-205)||(33831562-33831609)
chr5 (144-194)||(9049605-9049655)
chr5 (126-176)||(16407897-16407946)
chr5 (2-35)||(42428827-42428860)
chr5 (45-93)||(3075976-3076024)
chr5 (121-165)||(31300337-31300381)
[»] chr4 (66 HSPs)
chr4 (1-205)||(37740351-37740555)
chr4 (1-205)||(34570653-34570857)
chr4 (1-205)||(54200145-54200349)
chr4 (1-205)||(9927696-9927904)
chr4 (1-204)||(29254219-29254422)
chr4 (3-205)||(5429407-5429608)
chr4 (45-205)||(26175875-26176035)
chr4 (4-165)||(36314854-36315016)
chr4 (4-165)||(36329063-36329225)
chr4 (2-205)||(52082896-52083100)
chr4 (2-205)||(52093903-52094107)
chr4 (16-195)||(5268836-5269015)
chr4 (4-165)||(8689121-8689282)
chr4 (4-195)||(54867461-54867652)
chr4 (4-165)||(6743039-6743201)
chr4 (4-165)||(25861657-25861819)
chr4 (2-197)||(52095609-52095803)
chr4 (45-205)||(12739789-12739949)
chr4 (45-205)||(12747995-12748155)
chr4 (17-195)||(16622931-16623108)
chr4 (16-195)||(3777831-3778009)
chr4 (17-195)||(16628510-16628687)
chr4 (45-205)||(48142810-48142971)
chr4 (37-205)||(30000044-30000212)
chr4 (45-205)||(56178875-56179035)
chr4 (16-165)||(5147989-5148138)
chr4 (16-165)||(5143571-5143721)
chr4 (45-165)||(35661978-35662098)
chr4 (1-205)||(12745675-12745860)
chr4 (45-205)||(5370325-5370486)
chr4 (5-95)||(6655467-6655557)
chr4 (3-95)||(50674413-50674505)
chr4 (45-195)||(10047663-10047808)
chr4 (1-95)||(26363772-26363866)
chr4 (17-195)||(38152075-38152253)
chr4 (81-165)||(5396372-5396457)
chr4 (18-95)||(27417518-27417595)
chr4 (3-95)||(40630493-40630585)
chr4 (4-95)||(41639075-41639166)
chr4 (1-95)||(50263265-50263358)
chr4 (1-73)||(46570115-46570187)
chr4 (4-165)||(31985258-31985419)
chr4 (119-182)||(36994368-36994431)
chr4 (14-205)||(13992525-13992717)
chr4 (16-205)||(24968850-24969040)
chr4 (24-96)||(3909844-3909916)
chr4 (1-81)||(36994285-36994365)
chr4 (141-205)||(46147594-46147658)
chr4 (142-205)||(52467594-52467657)
chr4 (144-205)||(45687435-45687496)
chr4 (151-203)||(6375950-6376002)
chr4 (115-176)||(31495578-31495639)
chr4 (1-59)||(54882547-54882605)
chr4 (16-64)||(5396327-5396375)
chr4 (141-205)||(36463641-36463705)
chr4 (141-205)||(37229975-37230039)
chr4 (110-165)||(42599305-42599361)
chr4 (45-87)||(2209259-2209301)
chr4 (138-195)||(5112519-5112576)
chr4 (108-195)||(39774032-39774120)
chr4 (1-35)||(26176033-26176067)
chr4 (149-195)||(37755174-37755220)
chr4 (140-205)||(5871684-5871749)
chr4 (140-205)||(13009670-13009735)
chr4 (132-165)||(18377664-18377697)
chr4 (147-203)||(5208084-5208140)
[»] chr3 (78 HSPs)
chr3 (4-205)||(29812791-29812992)
chr3 (2-205)||(29810594-29810797)
chr3 (17-205)||(40734239-40734427)
chr3 (2-205)||(7761989-7762195)
chr3 (1-205)||(5236695-5236900)
chr3 (45-205)||(51398583-51398743)
chr3 (17-165)||(30709423-30709572)
chr3 (4-195)||(36029375-36029566)
chr3 (4-195)||(40592395-40592586)
chr3 (2-205)||(45094889-45095094)
chr3 (4-195)||(24694779-24694970)
chr3 (16-195)||(48438497-48438676)
chr3 (17-195)||(1735930-1736108)
chr3 (5-195)||(8370104-8370293)
chr3 (2-205)||(5260562-5260766)
chr3 (17-165)||(47923530-47923679)
chr3 (7-195)||(16264631-16264818)
chr3 (4-195)||(39032169-39032359)
chr3 (17-195)||(27026988-27027165)
chr3 (2-194)||(44331295-44331473)
chr3 (16-165)||(8126941-8127091)
chr3 (2-205)||(5258383-5258587)
chr3 (14-205)||(37408197-37408388)
chr3 (17-205)||(9636366-9636555)
chr3 (2-156)||(44331735-44331889)
chr3 (2-205)||(7764177-7764397)
chr3 (4-195)||(27974566-27974756)
chr3 (1-95)||(55302532-55302626)
chr3 (17-163)||(40844968-40845113)
chr3 (16-165)||(27038362-27038502)
chr3 (1-95)||(43402357-43402451)
chr3 (16-167)||(23410607-23410758)
chr3 (1-94)||(43404301-43404394)
chr3 (14-165)||(37725986-37726137)
chr3 (1-95)||(4569458-4569552)
chr3 (18-163)||(25929023-25929169)
chr3 (4-165)||(33386289-33386450)
chr3 (4-95)||(54593214-54593305)
chr3 (1-95)||(31340608-31340703)
chr3 (16-165)||(35925791-35925951)
chr3 (9-73)||(34490747-34490811)
chr3 (17-95)||(6096167-6096245)
chr3 (1-95)||(40912844-40912938)
chr3 (17-106)||(40735170-40735259)
chr3 (1-73)||(49200040-49200112)
chr3 (4-165)||(27453269-27453429)
chr3 (1-79)||(46173240-46173318)
chr3 (14-176)||(23198206-23198368)
chr3 (14-176)||(23200405-23200567)
chr3 (54-167)||(23392187-23392300)
chr3 (81-195)||(21711504-21711617)
chr3 (16-75)||(21711603-21711662)
chr3 (147-205)||(40735254-40735312)
chr3 (140-205)||(32744665-32744730)
chr3 (45-95)||(36018401-36018451)
chr3 (140-205)||(29196640-29196705)
chr3 (37-165)||(32143634-32143761)
chr3 (140-205)||(53921742-53921807)
chr3 (141-205)||(44700731-44700795)
chr3 (110-195)||(6794434-6794519)
chr3 (4-73)||(27986090-27986159)
chr3 (149-194)||(51352378-51352423)
chr3 (141-205)||(9666707-9666771)
chr3 (149-205)||(39153600-39153656)
chr3 (141-196)||(40519446-40519501)
chr3 (115-176)||(7782409-7782470)
chr3 (140-205)||(22835241-22835306)
chr3 (140-205)||(26386720-26386785)
chr3 (81-165)||(26928290-26928374)
chr3 (13-73)||(53921855-53921917)
chr3 (58-96)||(30235688-30235726)
chr3 (140-205)||(760711-760776)
chr3 (144-205)||(2075309-2075369)
chr3 (149-198)||(8166705-8166754)
chr3 (140-205)||(9581147-9581212)
chr3 (140-205)||(19684128-19684193)
chr3 (81-165)||(27986147-27986231)
chr3 (141-205)||(32890968-32891032)
[»] chr8 (53 HSPs)
chr8 (1-205)||(15212511-15212715)
chr8 (4-205)||(43036151-43036352)
chr8 (1-205)||(30143067-30143271)
chr8 (13-205)||(33351887-33352079)
chr8 (3-205)||(12702877-12703080)
chr8 (1-205)||(4731383-4731587)
chr8 (5-205)||(34254567-34254768)
chr8 (2-205)||(17982378-17982582)
chr8 (2-205)||(34256743-34256947)
chr8 (4-195)||(5702104-5702295)
chr8 (2-198)||(1746464-1746661)
chr8 (16-195)||(23799212-23799391)
chr8 (2-177)||(19948588-19948764)
chr8 (2-205)||(31217982-31218186)
chr8 (1-205)||(27811023-27811207)
chr8 (2-177)||(44303579-44303755)
chr8 (99-205)||(42498017-42498123)
chr8 (16-167)||(3051430-3051582)
chr8 (4-95)||(42435558-42435649)
chr8 (17-174)||(4743463-4743620)
chr8 (45-195)||(7412622-7412771)
chr8 (1-95)||(4283053-4283147)
chr8 (81-205)||(4733610-4733738)
chr8 (81-177)||(19945627-19945722)
chr8 (78-165)||(4696306-4696394)
chr8 (86-195)||(4456310-4456419)
chr8 (4-195)||(19175357-19175569)
chr8 (6-139)||(10014889-10015023)
chr8 (3-95)||(22976043-22976135)
chr8 (4-64)||(4696252-4696312)
chr8 (3-73)||(11383515-11383585)
chr8 (3-73)||(40221273-40221343)
chr8 (3-96)||(1345717-1345812)
chr8 (141-205)||(5689136-5689200)
chr8 (141-205)||(18141685-18141749)
chr8 (115-176)||(2627581-2627642)
chr8 (132-205)||(3303909-3303982)
chr8 (16-73)||(4733565-4733622)
chr8 (130-194)||(1872173-1872237)
chr8 (149-205)||(40320940-40320996)
chr8 (2-73)||(42497940-42498012)
chr8 (149-196)||(29796571-29796618)
chr8 (139-205)||(1292702-1292768)
chr8 (138-196)||(32902435-32902493)
chr8 (140-205)||(6598836-6598901)
chr8 (140-205)||(6674289-6674354)
chr8 (144-205)||(8153629-8153690)
chr8 (141-193)||(10929666-10929718)
chr8 (141-205)||(30291457-30291521)
chr8 (132-195)||(28307844-28307907)
chr8 (58-94)||(8910975-8911012)
chr8 (140-205)||(41365086-41365151)
chr8 (58-94)||(38249119-38249155)
[»] chr2 (50 HSPs)
chr2 (4-196)||(2837092-2837284)
chr2 (2-205)||(2334656-2334860)
chr2 (1-194)||(36318259-36318452)
chr2 (45-205)||(39284654-39284814)
chr2 (4-205)||(36988314-36988516)
chr2 (4-165)||(34389162-34389323)
chr2 (2-205)||(5723493-5723697)
chr2 (4-195)||(33528248-33528439)
chr2 (4-165)||(21630256-21630418)
chr2 (2-205)||(45099480-45099684)
chr2 (4-195)||(14698633-14698824)
chr2 (4-163)||(20522535-20522695)
chr2 (16-165)||(23078108-23078257)
chr2 (2-177)||(4503399-4503575)
chr2 (4-195)||(33118417-33118608)
chr2 (81-205)||(38312045-38312169)
chr2 (49-205)||(29867641-29867798)
chr2 (16-163)||(10706889-10707036)
chr2 (4-195)||(28258802-28258992)
chr2 (2-205)||(36205902-36206108)
chr2 (17-203)||(8389786-8389972)
chr2 (75-205)||(6595245-6595374)
chr2 (17-165)||(13569640-13569789)
chr2 (81-205)||(17057608-17057732)
chr2 (81-205)||(17085591-17085715)
chr2 (16-118)||(39483235-39483337)
chr2 (81-195)||(36757463-36757577)
chr2 (10-95)||(35447451-35447535)
chr2 (149-205)||(33162689-33162745)
chr2 (32-205)||(4484570-4484742)
chr2 (4-65)||(17865589-17865650)
chr2 (37-205)||(30833107-30833274)
chr2 (141-205)||(11049402-11049465)
chr2 (141-205)||(36773414-36773478)
chr2 (32-176)||(32289329-32289472)
chr2 (92-159)||(17865521-17865589)
chr2 (140-205)||(11151830-11151895)
chr2 (140-205)||(11690365-11690430)
chr2 (140-205)||(42362216-42362281)
chr2 (158-205)||(723983-724030)
chr2 (138-182)||(11067154-11067198)
chr2 (61-96)||(7450872-7450907)
chr2 (144-195)||(12632966-12633017)
chr2 (158-205)||(14634065-14634112)
chr2 (128-195)||(40015206-40015273)
chr2 (58-96)||(1632298-1632336)
chr2 (115-176)||(6266537-6266598)
chr2 (140-205)||(14202646-14202711)
chr2 (151-195)||(34682102-34682146)
chr2 (14-125)||(40739184-40739295)
[»] scaffold0066 (1 HSPs)
scaffold0066 (1-205)||(20654-20858)
[»] chr6 (43 HSPs)
chr6 (4-165)||(18234394-18234556)
chr6 (2-205)||(5406437-5406641)
chr6 (2-205)||(5410762-5410966)
chr6 (2-163)||(22964012-22964173)
chr6 (2-163)||(23824220-23824381)
chr6 (17-165)||(31086110-31086260)
chr6 (2-179)||(5411498-5411676)
chr6 (2-198)||(31404920-31405117)
chr6 (2-205)||(33160592-33160797)
chr6 (2-177)||(30834803-30834980)
chr6 (2-205)||(33211424-33211627)
chr6 (16-195)||(10076827-10077006)
chr6 (2-179)||(5407173-5407351)
chr6 (17-175)||(16452598-16452756)
chr6 (17-165)||(5017133-5017282)
chr6 (4-205)||(9183270-9183450)
chr6 (11-162)||(24435603-24435755)
chr6 (11-163)||(21272620-21272773)
chr6 (4-195)||(31979794-31979990)
chr6 (4-195)||(5757103-5757293)
chr6 (61-205)||(5413631-5413775)
chr6 (1-95)||(21593173-21593267)
chr6 (2-125)||(16452759-16452883)
chr6 (9-95)||(3809276-3809362)
chr6 (16-92)||(26661471-26661547)
chr6 (16-92)||(26767442-26767518)
chr6 (1-69)||(603612-603680)
chr6 (2-80)||(5413812-5413891)
chr6 (17-96)||(26954651-26954730)
chr6 (81-165)||(5571945-5572029)
chr6 (81-165)||(23896663-23896748)
chr6 (4-119)||(24714730-24714845)
chr6 (4-73)||(5571888-5571957)
chr6 (115-176)||(2171799-2171860)
chr6 (140-205)||(3039155-3039219)
chr6 (4-73)||(23896736-23896805)
chr6 (140-205)||(26954524-26954589)
chr6 (110-195)||(31936857-31936942)
chr6 (140-207)||(30684143-30684210)
chr6 (140-205)||(16567070-16567135)
chr6 (140-205)||(28137647-28137712)
chr6 (81-176)||(6097702-6097797)
chr6 (1-33)||(17759462-17759494)
[»] scaffold0006 (3 HSPs)
scaffold0006 (4-160)||(2809-2966)
scaffold0006 (4-165)||(5996-6158)
scaffold0006 (4-165)||(132904-133065)
[»] scaffold0002 (1 HSPs)
scaffold0002 (2-205)||(434258-434462)
[»] scaffold0087 (2 HSPs)
scaffold0087 (4-195)||(36457-36647)
scaffold0087 (4-195)||(43586-43776)
[»] scaffold0016 (1 HSPs)
scaffold0016 (2-205)||(114311-114519)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-95)||(80850-80944)
[»] scaffold0286 (2 HSPs)
scaffold0286 (5-95)||(11069-11159)
scaffold0286 (115-176)||(22183-22244)
[»] scaffold0036 (1 HSPs)
scaffold0036 (71-195)||(85965-86089)
[»] scaffold0098 (1 HSPs)
scaffold0098 (4-194)||(45482-45671)
[»] scaffold0466 (1 HSPs)
scaffold0466 (16-95)||(6849-6929)
[»] scaffold0140 (1 HSPs)
scaffold0140 (14-165)||(8052-8203)
[»] scaffold0491 (2 HSPs)
scaffold0491 (32-176)||(11430-11573)
scaffold0491 (115-176)||(9004-9065)
[»] scaffold0176 (2 HSPs)
scaffold0176 (78-165)||(17562-17650)
scaffold0176 (2-73)||(17635-17706)
[»] scaffold1519 (1 HSPs)
scaffold1519 (32-205)||(663-846)
[»] scaffold0510 (1 HSPs)
scaffold0510 (4-53)||(1235-1284)


Alignment Details
Target: chr1 (Bit Score: 173; Significance: 3e-93; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 5 - 205
Target Start/End: Complemental strand, 30476887 - 30476687
Alignment:
Q  5 ttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaa 104  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  30476887 ttgctgggcaagttttcaagataaggttggttgaaccttgggtcgtacacaccaaacgtgtcacgatttgggaaaacgtgacacgattttgacagctgaa 30476788  T
Q  105 gactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttga 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||||||||    
T  30476787 gactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaatgatgtaatgttagggctgagggtatttga 30476688  T
Q  205 t 205  Q
    |    
T  30476687 t 30476687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 3 - 205
Target Start/End: Original strand, 31658965 - 31659167
Alignment:
Q  3 gcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctg 102  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| || ||    
T  31658965 gcttgctgggaaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttggtaaaatgtgacacgattttgacagttg 31659064  T
Q  103 aagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtattt 202  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||    
T  31659065 aagactgctatataagtgttctttgcagattttgagagagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtcttt 31659164  T
Q  203 gat 205  Q
    |||    
T  31659165 gat 31659167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 24 - 205
Target Start/End: Complemental strand, 28220646 - 28220465
Alignment:
Q  24 gataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatataagtgttc 123  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  28220646 gataaggttggtcgtaccttgggtcgtacgcacaaaacgtgtcacgatttgggaaaacgtgacacgattttgacagctgaagactgctatataagtgttc 28220547  T
Q  124 tttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||    
T  28220546 tttgcagattttgaaggtgagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgat 28220465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 4 - 205
Target Start/End: Original strand, 49918077 - 49918278
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctga 103  Q
    ||||||||||| ||||||||||||||||||||  ||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||| ||||||    
T  49918077 cttgctgggcacgttttcaggataaggttggtcataccttgggtcgtacacaccaatcgtgtcacgatttgggaaaatgtgacacgattttgacagctga 49918176  T
Q  104 agactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttg 203  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||| ||||    
T  49918177 agactgctatataagtgttctttgcagattttgaagtagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaaggtctttg 49918276  T
Q  204 at 205  Q
    ||    
T  49918277 at 49918278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 24 - 205
Target Start/End: Complemental strand, 28223841 - 28223660
Alignment:
Q  24 gataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatataagtgttc 123  Q
    |||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  28223841 gataaggttggtcgtaccttgggtcgtacgcacaaaacgtgtcacaatttgggaaaacgtgacacgattttgacagctgaagactgctatataagtgttc 28223742  T
Q  124 tttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||    
T  28223741 tttgcagattttgaaggtgagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgat 28223660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 10924948 - 10925152
Alignment:
Q  1 cggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagc 100  Q
    ||||||| | ||||||||||||  |||| ||||||  ||||||||||| |||||| ||| ||||||||||||||| |||||||||||||||||||| |||    
T  10924948 cggcttggtaggcaagttttcaaaataaagttggtcataccttgggtcatacgcatcaaccgtgtcacgatttggcaaaacgtgacacgattttgacagc 10925047  T
Q  101 tgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtat 200  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||| |    
T  10925048 tgaagactgttatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttggaaaatcaaaggaggtaactttagggttgagggtct 10925147  T
Q  201 ttgat 205  Q
    |||||    
T  10925148 ttgat 10925152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 44454884 - 44455089
Alignment:
Q  1 cggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagc 100  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||| ||     
T  44454884 cggcttgctgggcaagttttcaagataaggttggttgtaccttgggtcgtacgcactaaacgtgtcacgatttggcaaaacgtggcacgattttgacagt 44454983  T
Q  101 tgaagactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggta 199  Q
    || ||  | |||| ||||||||||| ||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||  ||||||||||||||     
T  44454984 tgcagggtactatttaagtgttcttgtgcagattttgaaggagaggttgtagagagagaaacttggtaaatcaaaggaggtaactttagggttgagggtc 44455083  T
Q  200 tttgat 205  Q
    ||||||    
T  44455084 tttgat 44455089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 17 - 205
Target Start/End: Original strand, 1833263 - 1833451
Alignment:
Q  17 ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatata 116  Q
    |||||| ||||||||||||  |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||    
T  1833263 ttttcaagataaggttggtcataccttgggttgtacgcaccaaacgtgtcacgatttgcgaaaacgtgacacgattttgacagctgaagactcctatata 1833362  T
Q  117 agtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    ||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||  ||| |||||||||| ||||||    
T  1833363 agtattctttgcagattttgaatgagagattgaagagagagaaacttgggaaatcaaaggagataactttaaggttgagggtctttgat 1833451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 5 - 205
Target Start/End: Original strand, 3156596 - 3156795
Alignment:
Q  5 ttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaa 104  Q
    ||||||| || |||||||||||||||||||| ||||||||| || ||| |||||||||||||||  ||||| ||||||| |||| ||||||| |||||||    
T  3156596 ttgctggacacgttttcaggataaggttggtcgtaccttgg-tcatacacaccaaacgtgtcaccgtttggcaaaacgtaacacaattttgacagctgaa 3156694  T
Q  105 gactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttga 204  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||| |||||    
T  3156695 gactgttatataagtgttctttgcagattttgaaggagagctggaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttga 3156794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 4 - 205
Target Start/End: Original strand, 3206713 - 3206916
Alignment:
Q  4 cttgctgggcaagttttc-aggataaggttggttgt-accttgggtcgtacgcaccaaacgtgtcacgatttgggaaaa-cgtgacacgattttgatagc 100  Q
    |||||||||||||||||  |||||||||||||| || ||||||||||||||||| ||| |||| ||| ||||||||||| ||||||||||||| ||  ||    
T  3206713 cttgctgggcaagttttttaggataaggttggtcgttaccttgggtcgtacgcatcaatcgtgacacaatttgggaaaaacgtgacacgatttcgac-gc 3206811  T
Q  101 tgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtat 200  Q
    |||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||| |    
T  3206812 tgaagattgctatataagtgttctttgaagattttgaaggagagcatgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtct 3206911  T
Q  201 ttgat 205  Q
    |||||    
T  3206912 ttgat 3206916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 4 - 165
Target Start/End: Complemental strand, 13598873 - 13598711
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctga 103  Q
    ||||||||| | |||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||  ||||||||||||||||||| ||||||    
T  13598873 cttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacaatttggacaaacgtgacacgattttgacagctga 13598774  T
Q  104 agactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgg 165  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  13598773 agactgctatataaatgttcttgtgcagattttgaaggagagcttgaagagagagaaaattgg 13598711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 4 - 195
Target Start/End: Original strand, 21536195 - 21536385
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctga 103  Q
    ||||||||| | ||||||||||| |||||||| ||||||||||||||||||||||| |||| | |||||||| |||||||||||||||||||| ||||||    
T  21536195 cttgctgggtacgttttcaggatgaggttggtcgtaccttgggtcgtacgcaccaatcgtgccccgatttgg-aaaacgtgacacgattttgacagctga 21536293  T
Q  104 agactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||   ||||||||||||  |||||||||||    
T  21536294 agactgctatataagtgttcttgtgcagattttgaaggagagcttgaagtgagagaaactt-ggattacaaaggaggtaactttagggttgag 21536385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 17 - 195
Target Start/End: Complemental strand, 29652273 - 29652095
Alignment:
Q  17 ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatata 116  Q
    ||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||  |||||||||| |||||||| |||||||||||||||||||    
T  29652273 ttttcaggataaggttggtcgtaccttgggtcgtacacaccaatcgtgtcacgatttggacaaacgtgacatgattttgacagctgaagactgctatata 29652174  T
Q  117 agtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    |||||| || ||||||||||||||||||||||||| |||||||||||| |||   ||||||||||||  |||||||||||    
T  29652173 agtgtttttgtgcagattttgaaggagagcttgaaaagagagaaactt-ggattacaaaggaggtaactttagggttgag 29652095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 4 - 165
Target Start/End: Complemental strand, 3282179 - 3282018
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctga 103  Q
    ||||||||| | ||||||| ||||||||||||  |||||||||||||||||||||| |||| |||||||||  |||||||||||||||||||| ||||||    
T  3282179 cttgctgggtacgttttcaagataaggttggtcataccttgggtcgtacgcaccaatcgtgccacgatttga-aaaacgtgacacgattttgacagctga 3282081  T
Q  104 agactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgg 165  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  3282080 agactgctatataagtgttcttatgcagattttgaaggagagcttgaagtgagagaaacttgg 3282018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 2 - 205
Target Start/End: Complemental strand, 13316761 - 13316557
Alignment:
Q  2 ggcttgctgggcaag-ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaa-cgtgacacgattttgatag 99  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||| ||| |||| ||||| | ||||||| ||||||||||||||||  |    
T  13316761 ggcttgctgggcaagattttcaggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgagtggggaaaaacgtgacacgattttgac-g 13316663  T
Q  100 ctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggta 199  Q
    | |||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||  | ||  |||||||| |||||     
T  13316662 cagaagacagctatataagtgttctttgcagattttgaagatgagcttgaagagagagaaacttgggaaatcaaaggtagcaactttagggtttagggtc 13316563  T
Q  200 tttgat 205  Q
    ||||||    
T  13316562 tttgat 13316557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 2 - 205
Target Start/End: Original strand, 20762397 - 20762601
Alignment:
Q  2 ggcttgctgggcaag-ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaa-cgtgacacgattttgatag 99  Q
    |||||| |||||||| ||||||||||||||||||| ||||||| | ||| ||||| ||| |||| ||||||| ||||||| ||||||||||||| ||  |    
T  20762397 ggcttgttgggcaagattttcaggataaggttggtcgtacctttgatcgaacgcatcaatcgtggcacgattggggaaaaacgtgacacgatttcgac-g 20762495  T
Q  100 ctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggta 199  Q
    | |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||  |||||||| |||||     
T  20762496 cagaagacagctatataagtgttctttgcagattttgaaagagagcttgaagagagagaaacttgggaaatcaaaggaagcaactttagggtttagggtc 20762595  T
Q  200 tttgat 205  Q
    ||||||    
T  20762596 tttgat 20762601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 61 - 205
Target Start/End: Complemental strand, 37503937 - 37503793
Alignment:
Q  61 cgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaa 160  Q
    |||| ||||| ||| ||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  37503937 cgtgacacgacttgagaaaacgtgacacgatttttacagctgaagactgatatataagtgttctttgcagattttgaaggagaggttgaagagagagaaa 37503838  T
Q  161 cttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||||||||||||||||||| |  |||||||||||||| ||||||    
T  37503837 cttgggaaatcaaaggaggtgactttagggttgagggtctttgat 37503793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 16 - 165
Target Start/End: Complemental strand, 37070228 - 37070078
Alignment:
Q  16 gttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatat 115  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||| ||| |||||||  ||||||| |||| |||||||||||||    
T  37070228 gttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgccacgatttggaaaatcgtgacataattttgacagctaaagactgctatat 37070129  T
Q  116 aagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgg 165  Q
    |||||||||| |||||||||||||| |||||| ||||||||||||||||||    
T  37070128 aagtgttcttgtgcagattttgaagtagagctggaagagagagaaacttgg 37070078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 4 - 165
Target Start/End: Original strand, 13604247 - 13604408
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctga 103  Q
    ||||||||  |||||||||||||||||||||| ||||||||||||||||| | ||| |||| |||||||| |||||||||| |||||||||   ||||||    
T  13604247 cttgctggttaagttttcaggataaggttggtcgtaccttgggtcgtacgtatcaatcgtgacacgattt-ggaaaacgtggcacgattttatcagctga 13604345  T
Q  104 agactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgg 165  Q
    |||||||||||||||||||||| |||| |||||| |||||||||| |||||||||||||||||    
T  13604346 agactgctatataagtgttcttgtgcaaattttggaggagagcttaaagagagagaaacttgg 13604408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 99 - 205
Target Start/End: Original strand, 3189154 - 3189260
Alignment:
Q  99 gctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggt 198  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  3189154 gctgaagattgctatataagtgttctttgaagattttgaaggagagcatgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggt 3189253  T
Q  199 atttgat 205  Q
     ||||||    
T  3189254 ctttgat 3189260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 99 - 205
Target Start/End: Original strand, 3197971 - 3198077
Alignment:
Q  99 gctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggt 198  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  3197971 gctgaagattgctatataagtgttctttgaagattttgaaggagagcatgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggt 3198070  T
Q  199 atttgat 205  Q
     ||||||    
T  3198071 ctttgat 3198077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 37033727 - 37033636
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttg 95  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  37033727 cttgcagggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgacacaattttg 37033636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 16 - 198
Target Start/End: Complemental strand, 4553076 - 4552883
Alignment:
Q  16 gttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatat 115  Q
    ||||||||||||||||| || ||| | || |||||||||| ||| ||||||||||||||| ||||||||||||| |||||| |||||||||||| |||||    
T  4553076 gttttcaggataaggttagtcgtatcgtgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttgacagctgaagactgttatat 4552977  T
Q  116 aagtg-ttctttgcagattttgaag----------gagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggt 198  Q
    ||||| |||||||||||||||||||          |||||||| |||||||   |||||||||||| |||||||||||  ||||||||||||||    
T  4552976 aagtgtttctttgcagattttgaagggtggttcaagagagcttcaagagaggagaacttgggaaattaaaggaggtaactttagggttgagggt 4552883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 193119 - 193213
Alignment:
Q  1 cggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttg 95  Q
    |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  193119 cggcttgctgggcaagtttttaggataagattggtcgtaccttgggtcgtacgcaccaaacgtgtcgcgatttgggaaatcgtgacacgattttg 193213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 43 - 195
Target Start/End: Original strand, 26644561 - 26644713
Alignment:
Q  43 tgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatataagtgttctt-tgcagattttg-aagg 140  Q
    ||||||||||||||||| |||| |||||||||| |||||||| |||||||||   |||||||||||||||||||||||||||| ||||||||||| ||||    
T  26644561 tgggtcgtacgcaccaatcgtggcacgatttgg-aaaacgtggcacgattttatcagctgaagactgctatataagtgttcttatgcagattttgaaagg 26644659  T
Q  141 agagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    ||||| ||||||||||||||||| |||   |||||||| |||| |||||||||||    
T  26644660 agagcctgaagagagagaaactt-ggattacaaaggagataattttagggttgag 26644713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 205
Target Start/End: Original strand, 46064659 - 46064847
Alignment:
Q  17 ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatata 116  Q
    |||||||||||| |||||| ||||||||||||||||| | ||| |||| ||||||||||  || | || ||||||||||| |||||||||||| ||| ||    
T  46064659 ttttcaggataaagttggtcgtaccttgggtcgtacgtatcaaccgtgacacgatttggccaatcatgtcacgattttgacagctgaagactgttattta 46064758  T
Q  117 agtgtt-ctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||||| |  | || ||||| ||||||||||| |||||||| |||||||||||||||||| ||||||  |||  ||||||||| ||||||    
T  46064759 agtgttccaattca-atttttaaggagagcttcaagagagaaaaacttgggaaatcaaagaaggtaactttattgttgagggtctttgat 46064847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 102 - 205
Target Start/End: Complemental strand, 37560211 - 37560108
Alignment:
Q  102 gaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatt 201  Q
    ||||||| || ||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||| |||||||  ||| |||||||||| ||    
T  37560211 gaagactcctgtataagtgttctttgcagattttgaagtaaagcttgaagagagagaaacttgagaaatcaaatgaggtaactttaaggttgagggtctt 37560112  T
Q  202 tgat 205  Q
    ||||    
T  37560111 tgat 37560108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 29135777 - 29135847
Alignment:
Q  3 gcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgattt 73  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  29135777 gcttgctgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgattt 29135847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 13547747 - 13547657
Alignment:
Q  3 gcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgatttt 94  Q
    |||||||||||| |||||||  ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||    
T  13547747 gcttgctgggcacgttttcaa-ataaggttggtcgtaccttgggtcgtacgcaccaaccgtgtcacgatttgggaaaacataacacgatttt 13547657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 13549658 - 13549568
Alignment:
Q  3 gcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgatttt 94  Q
    |||||||||||| |||||||  ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||    
T  13549658 gcttgctgggcacgttttcaa-ataaggttggtcgtaccttgggtcgtacgcaccaaccgtgtcacgatttgggaaaacataacacgatttt 13549568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 11348226 - 11348298
Alignment:
Q  1 cggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgattt 73  Q
    ||||||| ||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||    
T  11348226 cggcttgttgggcaagttttcaggataaggttggtcgtacattggatcgtacgcaccaaacgtgtcacgattt 11348298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 37879550 - 37879480
Alignment:
Q  3 gcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgattt 73  Q
    |||| |||| |||||||| |||||||||||||| ||||||||||||| ||||||||||| |||||||||||    
T  37879550 gcttactggacaagtttttaggataaggttggtcgtaccttgggtcgcacgcaccaaacatgtcacgattt 37879480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 205
Target Start/End: Complemental strand, 13138286 - 13138213
Alignment:
Q  132 ttttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||||| | ||||||| |||||||| |||||||||||||||||||||||||  |||||||||||||| ||||||    
T  13138286 ttttgaggaagagcttcaagagagaaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgat 13138213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 28265869 - 28265805
Alignment:
Q  141 agagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    ||||||| |||||||||||||| |||||||||||||||||||  |||||||||||||| ||||||    
T  28265869 agagcttcaagagagagaaactagggaaatcaaaggaggtaactttagggttgagggtctttgat 28265805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 50167491 - 50167427
Alignment:
Q  141 agagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    ||||||| |||||||||||||| |||||||||||||||||||  |||||||||||||| ||||||    
T  50167491 agagcttcaagagagagaaactagggaaatcaaaggaggtaactttagggttgagggtctttgat 50167427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 17 - 205
Target Start/End: Original strand, 15820048 - 15820236
Alignment:
Q  17 ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatata 116  Q
    |||| |||||||||||||| ||||||||||||||||||| ||| | |||| |||||| || || | ||||||||||| || | |   ||| | |||| ||    
T  15820048 tttttaggataaggttggtcgtaccttgggtcgtacgcatcaaccatgtctcgattttggcaaccatgacacgatttagacaacaacagagtactattta 15820147  T
Q  117 agtgttctttgcagattttgaag-gagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    | |||| |  ||  |||||  || ||| |||| |||||||| ||||||||||||||||| |||||||  |||||||||||||| ||||||    
T  15820148 attgtt-tcagcttatttttgagagagggcttcaagagagaaaaacttgggaaatcaaaagaggtaactttagggttgagggtctttgat 15820236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 141 - 198
Target Start/End: Complemental strand, 50169513 - 50169456
Alignment:
Q  141 agagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggt 198  Q
    ||||||| |||||||||||||| |||||||||||||||||||  ||||||||||||||    
T  50169513 agagcttcaagagagagaaactagggaaatcaaaggaggtaactttagggttgagggt 50169456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 777095 - 777159
Alignment:
Q  141 agagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    ||||||| |||||||||||||| |||||||||||||||||||  |||||||||| ||| ||||||    
T  777095 agagcttcaagagagagaaactagggaaatcaaaggaggtaactttagggttgatggtctttgat 777159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 16455381 - 16455464
Alignment:
Q  11 ggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgatttt 94  Q
    |||| |||||||||||||| ||| | ||||||||||||||||||| ||| |||| ||||||||||  || ||||||||| ||||    
T  16455381 ggcacgttttcaggataagtttgctcgtaccttgggtcgtacgcatcaaccgtgacacgatttggccaatcgtgacacgttttt 16455464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 128 - 166
Target Start/End: Original strand, 9022655 - 9022693
Alignment:
Q  128 cagattttgaaggagagcttgaagagagagaaacttggg 166  Q
    |||||||||||||||||||||||||||||||||||||||    
T  9022655 cagattttgaaggagagcttgaagagagagaaacttggg 9022693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 195
Target Start/End: Original strand, 47098555 - 47098640
Alignment:
Q  110 ctatataagtgtt-ctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    ||||||||||||| |||||||||||||||| ||||||||  |||||||||||||| |||   ||||||||||||  |||||||||||    
T  47098555 ctatataagtgtttctttgcagattttgaatgagagcttttagagagagaaactt-ggattacaaaggaggtaactttagggttgag 47098640  T

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Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 195
Target Start/End: Original strand, 47102569 - 47102654
Alignment:
Q  110 ctatataagtgtt-ctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    ||||||||||||| |||||||||||||||| ||||||||  |||||||||||||| |||   ||||||||||||  |||||||||||    
T  47102569 ctatataagtgtttctttgcagattttgaatgagagcttttagagagagaaactt-ggattacaaaggaggtaactttagggttgag 47102654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 205
Target Start/End: Complemental strand, 197232 - 197147
Alignment:
Q  121 ttctttgcagattttgaag-gagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||||||||||||||  || |||| ||| |||||||  |||||||| ||||||||||||||||  |||||||||||||| ||||||    
T  197232 ttctttgcagatttttgagtgagaacttcaagagaggaaaacttggaaaatcaaaggaggtaactttagggttgagggtctttgat 197147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 23555569 - 23555504
Alignment:
Q  140 gagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||||||| |||||||| |||||||||||||||||||||||||  | |||||||||| | ||||||    
T  23555569 gagagcttcaagagagaaaaacttgggaaatcaaaggaggtaacttcagggttgaggatctttgat 23555504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 45644658 - 45644594
Alignment:
Q  141 agagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    ||||||| |||||||| ||||| ||||||||||||||| |||  |||||||||||||| ||||||    
T  45644658 agagcttcaagagagaaaaactagggaaatcaaaggagataactttagggttgagggtctttgat 45644594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 834453 - 834406
Alignment:
Q  158 aaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||||||||||||||||||||||||  |||||||||||||| ||||||    
T  834453 aaacttgggaaatcaaaggaggtaactttagggttgagggtctttgat 834406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 205
Target Start/End: Original strand, 51765234 - 51765324
Alignment:
Q  115 taagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    ||||||||||| ||||||||||||||| ||| | |||||| ||||||||||||||||||||||  ||||   ||||||| ||||| ||||||    
T  51765234 taagtgttcttgtgcagattttgaagg-gagttggaagagtgagaaacttgggaaatcaaagggagtaactctagggtttagggtctttgat 51765324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 3189078 - 3189151
Alignment:
Q  4 cttgctgggcaagttttc-aggataaggttggttgt-accttgggtcgtacgcaccaaacgtgtcacgatttgg 75  Q
    |||||||||||||||||  |||||||||||||| || ||||||||||||||||| ||| |||| ||| ||||||    
T  3189078 cttgctgggcaagttttttaggataaggttggtcgttaccttgggtcgtacgcatcaatcgtgacacaatttgg 3189151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 3197895 - 3197968
Alignment:
Q  4 cttgctgggcaagttttc-aggataaggttggttgt-accttgggtcgtacgcaccaaacgtgtcacgatttgg 75  Q
    |||||||||||||||||  |||||||||||||| || ||||||||||||||||| ||| |||| ||| ||||||    
T  3197895 cttgctgggcaagttttttaggataaggttggtcgttaccttgggtcgtacgcatcaatcgtgacacaatttgg 3197968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 3847425 - 3847360
Alignment:
Q  140 gagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||| ||| |||||||  |||||||||||||||||||||||||  ||||||| |||||| ||||||    
T  3847425 gagaacttcaagagaggaaaacttgggaaatcaaaggaggtaactttagggtcgagggtctttgat 3847360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 22819891 - 22819806
Alignment:
Q  16 gttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagct 101  Q
    |||||||| ||||| ||||| ||||||||||||||||||| | | |||  ||| |||| |  || |||||||||||||||||||||    
T  22819891 gttttcagaataagtttggtcgtaccttgggtcgtacgcatcgaccgtaacacaattttgccaatcgtgacacgattttgatagct 22819806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 40122502 - 40122446
Alignment:
Q  140 gagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagg 196  Q
    ||||| || |||||||| |||||||||||||||||||||||||  ||| ||||||||    
T  40122502 gagaggttcaagagagaaaaacttgggaaatcaaaggaggtaactttatggttgagg 40122446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 40282222 - 40282284
Alignment:
Q  115 taagtgttctt-tgcagattttgaag-gagagcttgaagagagagaaacttgggaaatcaaagg 176  Q
    ||||||||||| ||||||||| |||| ||||| | |||||||||||||||||||||||||||||    
T  40282222 taagtgttcttgtgcagattt-gaagagagagttggaagagagagaaacttgggaaatcaaagg 40282284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 195
Target Start/End: Complemental strand, 32889805 - 32889720
Alignment:
Q  110 ctatataagtgtt-ctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    ||||||||||||| ||||||| ||||||||| |||| ||  |||||||||||||| |||   ||||||||||||  |||||||||||    
T  32889805 ctatataagtgtttctttgcatattttgaagtagagattttagagagagaaactt-ggattgcaaaggaggtaactttagggttgag 32889720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 8551091 - 8551026
Alignment:
Q  140 gagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||| ||| |||||||  ||||||||||||||||||||| |||  |||||||| ||||| ||||||    
T  8551091 gagaacttcaagagaggaaaacttgggaaatcaaaggagttaactttagggttaagggtctttgat 8551026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 8871363 - 8871310
Alignment:
Q  141 agagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttga 194  Q
    ||||||| |||||||||||||| |||| ||||||| ||||||  ||||||||||    
T  8871363 agagcttcaagagagagaaactagggatatcaaagcaggtaactttagggttga 8871310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 148
Target Start/End: Original strand, 19365965 - 19366065
Alignment:
Q  48 cgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatataagtgttctt-tgcagattttgaaggagagct 146  Q
    |||||| ||||| |||| ||||| |||| ||| ||||||||||||||   ||  |||||||  ||| ||||||||||| ||||||||||| |||||||||    
T  19365965 cgtacgtaccaatcgtgacacgacttgg-aaatcgtgacacgattttatcagtggaagactagtatttaagtgttcttgtgcagattttggaggagagct 19366063  T
Q  147 tg 148  Q
    ||    
T  19366064 tg 19366065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 94
Target Start/End: Original strand, 45940747 - 45940780
Alignment:
Q  61 cgtgtcacgatttgggaaaacgtgacacgatttt 94  Q
    ||||||||||||||| ||||||||||||||||||    
T  45940747 cgtgtcacgatttggtaaaacgtgacacgatttt 45940780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 171; Significance: 5e-92; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 3 - 205
Target Start/End: Complemental strand, 2761743 - 2761541
Alignment:
Q  3 gcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctg 102  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  2761743 gcttgctgggcaagttttcaggataagattggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgacagctg 2761644  T
Q  103 aagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtattt 202  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||| | |||||    
T  2761643 aagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagataaacttgggaaatcaaaggaggtaactttagggttgatgatattt 2761544  T
Q  203 gat 205  Q
    |||    
T  2761543 gat 2761541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 18126369 - 18126573
Alignment:
Q  1 cggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagc 100  Q
    ||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  18126369 cggcttgttgggcaagttttcaggataatgttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgagaaaacgtgacacgattttgacagc 18126468  T
Q  101 tgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtat 200  Q
    | ||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||  |||||||||||||| |    
T  18126469 taaagactgatatataagtgttctttgcagattttgaagaagagcttgaatagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtct 18126568  T
Q  201 ttgat 205  Q
    |||||    
T  18126569 ttgat 18126573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 47676579 - 47676375
Alignment:
Q  1 cggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagc 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||     
T  47676579 cggcttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgattttggaaaacgtgacacaattttgacagt 47676480  T
Q  101 tgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtat 200  Q
    ||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||  |||||||||||||| |    
T  47676479 tgaagactgatatataagtgttctttgcagattttgaagaggagcttgaagagagagaaacttgggaaatcaaaggagataactttagggttgagggtct 47676380  T
Q  201 ttgat 205  Q
    |||||    
T  47676379 ttgat 47676375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 47674386 - 47674205
Alignment:
Q  1 cggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagc 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||| ||||| |||||||| |||    
T  47674386 cggcttgctgggcaagttttcaggataaggttggtcgtaccttgggttgtacgcaccaaacgtgtcacgattttggaaaacatgacatgattttgacagc 47674287  T
Q  101 tgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaa 182  Q
    |||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  47674286 tgaagactgctatataggtgttctttgcagattttgaagaggagcttgaagagagagaaacttgggaaatcaaaggaggtaa 47674205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 4 - 205
Target Start/End: Complemental strand, 14070274 - 14070072
Alignment:
Q  4 cttgctgggcaagtttt-caggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctg 102  Q
    |||||| |||||||||| || |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  14070274 cttgctaggcaagtttttcaagataaggttggtcgtaccttgggtcgtatgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgacagctg 14070175  T
Q  103 aagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtattt 202  Q
    ||||||| |||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||  |||||| ||||||| |||    
T  14070174 aagactgttatataagtgttctttgccgattttaaaggagggcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggctgagggtcttt 14070075  T
Q  203 gat 205  Q
    |||    
T  14070074 gat 14070072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 4 - 205
Target Start/End: Complemental strand, 14380302 - 14380100
Alignment:
Q  4 cttgctgggcaagtttt-caggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctg 102  Q
    |||||| |||||||||| || |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  14380302 cttgctaggcaagtttttcaagataaggttggtcgtaccttgggtcgtatgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgacagctg 14380203  T
Q  103 aagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtattt 202  Q
    ||||||| |||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||  |||||| ||||||| |||    
T  14380202 aagactgttatataagtgttctttgccgattttaaaggagggcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggctgagggtcttt 14380103  T
Q  203 gat 205  Q
    |||    
T  14380102 gat 14380100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 2 - 205
Target Start/End: Original strand, 4585887 - 4586090
Alignment:
Q  2 ggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagct 101  Q
    |||||| |||| |||||||||  ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||    
T  4585887 ggcttgttgggtaagttttcaatataaggttggtcgtaccttgggtcgtacgcaccaaacatgtcacgatttgggaaaatgtgacacgattttgacagct 4585986  T
Q  102 gaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatt 201  Q
     ||||||| |||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||||| ||||  |||||||||||| | ||    
T  4585987 aaagactgttatataagtgttctttgcagattttgaaggagagttagaagagagaaaaacttgggaaatcaaaggatgtaactttagggttgaggctctt 4586086  T
Q  202 tgat 205  Q
    ||||    
T  4586087 tgat 4586090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 9 - 205
Target Start/End: Original strand, 1113389 - 1113586
Alignment:
Q  9 tgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagact 108  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||| ||||||| |||    
T  1113389 tgggcaaattttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgtattggcaaaacgtgacacgattttgacagctgaatact 1113488  T
Q  109 gctatataagtg-ttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    | |||||||||| |||| |||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||  |||||||||||||| ||||||    
T  1113489 gttatataagtgtttctgtgcagattttgaagaagaggttgaagagagagaaacttgggaaatcaaaggaagtaactttagggttgagggtctttgat 1113586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 4 - 205
Target Start/End: Original strand, 23554767 - 23554969
Alignment:
Q  4 cttgctgggcaagtttt-caggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttg-ggaaaacgtgacacgattttgatagct 101  Q
    ||||||||||||||||| ||||||||||||||| |||| |||||||||||||| ||| |||| |||||||   ||||||||||||||||||||||  |||    
T  23554767 cttgctgggcaagtttttcaggataaggttggtcgtacattgggtcgtacgcatcaatcgtgacacgattaatggaaaacgtgacacgattttgac-gct 23554865  T
Q  102 gaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatt 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||| ||| ||    
T  23554866 gaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaacttcagggttgaaggtctt 23554965  T
Q  202 tgat 205  Q
    ||||    
T  23554966 tgat 23554969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 50 - 205
Target Start/End: Complemental strand, 30025126 - 30024971
Alignment:
Q  50 tacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatataagtgttctttgcagattttgaaggagagcttga 149  Q
    ||||||| ||| |||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  30025126 tacgcactaaatgtgtcacgatttggcaaaacgtgacacgattttgacagctgaagactactatataagtgttctttgcagattttgaatgagagcttga 30025027  T
Q  150 agagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||| ||||||    
T  30025026 agagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgat 30024971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 4 - 165
Target Start/End: Original strand, 2647321 - 2647483
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctga 103  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||  |||||||| |||||||||| ||||||    
T  2647321 cttgctgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttggacaaacgtgatacgattttgagagctga 2647420  T
Q  104 agactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgg 165  Q
    ||||||||||| |||||||||| ||||||||||||||||||| ||  ||||||||||||||||    
T  2647421 agactgctataaaagtgttcttgtgcagattttgaaggagagattttagagagagaaacttgg 2647483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 2 - 195
Target Start/End: Original strand, 46515930 - 46516120
Alignment:
Q  2 ggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagct 101  Q
    |||||| |||||| ||||||||||||||||||||   ||||||||||||| ||||||| | ||||||||||||| |||||||||||||||||||| ||||    
T  46515930 ggcttgttgggcacgttttcaggataaggttggtcacaccttgggtcgtatgcaccaagcatgtcacgatttggcaaaacgtgacacgattttgacagct 46516029  T
Q  102 gaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||| |||   ||||||||||||  |||||||||||    
T  46516030 gaagactgctatataagtgttctttgcagattttgaaggggagctt--agagagagaaactt-ggattacaaaggaggtaactttagggttgag 46516120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 2 - 205
Target Start/End: Complemental strand, 24515203 - 24514999
Alignment:
Q  2 ggcttgctgggcaag-ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaa-cgtgacacgattttgatag 99  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||| ||| |||| ||||||| ||||||| || |||||||||| ||  |    
T  24515203 ggcttgctgggcaagattttcaggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgattggggaaaaacgcgacacgatttagac-g 24515105  T
Q  100 ctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggta 199  Q
    | |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||  |||||||| |||||     
T  24515104 cagaagacagctatataagtgttctttgcagattttgaaggggagcttgaagagagagaaacttgggaaatcaaaggaagcaactttagggtttagggtc 24515005  T
Q  200 tttgat 205  Q
    ||||||    
T  24515004 tttgat 24514999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 48491303 - 48491508
Alignment:
Q  1 cggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagc 100  Q
    ||||||| |||||| | ||||| ||| |||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||     
T  48491303 cggcttgttgggcacgctttcaagattaggttggtcgtaccttgggtcgtacgcaccaaccgtgtcacgatttggcaaaacgtgacatgattttgatagt 48491402  T
Q  101 tgaagactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggta 199  Q
    || ||  | |||| ||||||||||| |||||||||||||| |||| |||||||||||||||||||  ||||||||||||||||  ||||||||||||||     
T  48491403 tgcagggtactatttaagtgttcttgtgcagattttgaagaagaggttgaagagagagaaacttgataaatcaaaggaggtaactttagggttgagggtc 48491502  T
Q  200 tttgat 205  Q
    ||||||    
T  48491503 tttgat 48491508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 13 - 205
Target Start/End: Original strand, 26417050 - 26417245
Alignment:
Q  13 caagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgcta 112  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||  || ||||||||||||||||  | ||||||||||||    
T  26417050 caagttttcagggtaaggttggtcgtaccttgggtcgtacgcaccaaccgtgtcacgatttggccaatcgtgacacgattttgacggttgaagactgcta 26417149  T
Q  113 tataagtg-----ttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    ||||||||     ||||||||||||||||||| |||||||||  ||||| ||||||| |||||||||||||||||  |||||||||||||| ||||||    
T  26417150 tataagtgttaatttctttgcagattttgaagaagagcttga--agagataaacttgagaaatcaaaggaggtaactttagggttgagggtctttgat 26417245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 2 - 205
Target Start/End: Original strand, 48489156 - 48489360
Alignment:
Q  2 ggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagct 101  Q
    ||||||||||||| | || |||||||||||||||  |||||||||| ||||||||||| ||||||||||||||| ||||||||||| |||||||| || |    
T  48489156 ggcttgctgggcatgcttccaggataaggttggtcataccttgggttgtacgcaccaatcgtgtcacgatttggcaaaacgtgacatgattttgacagtt 48489255  T
Q  102 gaagactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtat 200  Q
    | ||  | |||| ||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||  |||||||||| ||| |    
T  48489256 gcagggtactatttaagtgttcttgtgcagattttgaagaagagattgaagatagagaaacttgggaaatcaaaggaggtaactttagggttgatggtct 48489355  T
Q  201 ttgat 205  Q
    |||||    
T  48489356 ttgat 48489360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 16 - 165
Target Start/End: Complemental strand, 21989368 - 21989219
Alignment:
Q  16 gttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatat 115  Q
    |||||||||||||||||| | |||||||||||| |||||| ||| ||||||| ||||||| |||| ||||||||||||||| ||||||||||||||||||    
T  21989368 gttttcaggataaggttgatcgtaccttgggtcatacgcagcaatcgtgtcatgatttgg-aaaatgtgacacgattttgacagctgaagactgctatat 21989270  T
Q  116 aagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgg 165  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  21989269 aagtgttcttgtgcagattttgaaggagagcttgaagtgagagaaacttgg 21989219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 17 - 165
Target Start/End: Complemental strand, 49092150 - 49092000
Alignment:
Q  17 ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttggg-aaaacgtgacacgattttgatagctgaagactgctatat 115  Q
    ||||||||||||||||||| ||||||||| ||||| |||||||  ||| |||||||||   |||||||||||||||||||| ||||||||||||||||||    
T  49092150 ttttcaggataaggttggtcgtaccttggatcgtatgcaccaatagtgacacgatttgaacaaaacgtgacacgattttgacagctgaagactgctatat 49092051  T
Q  116 aagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgg 165  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  49092050 aagtgttcttgtgcagattttgaaggagagcttgaagagagagaaacttgg 49092000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 17 - 205
Target Start/End: Original strand, 4178516 - 4178704
Alignment:
Q  17 ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaa-cgtgacacgattttgatagctgaagactgctatat 115  Q
    ||||||||||||||||||| ||||||||| ||||||||| ||| |||| || |||| ||||||| ||||||||||||||||  || |||||| ||||||     
T  4178516 ttttcaggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcaagattggggaaaaacgtgacacgattttgac-gcagaagacagctataa 4178614  T
Q  116 aagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| | ||  |||||||| ||||| ||||||    
T  4178615 aagtgttctttgcagattttgaaggtgagcttgaagagagagaaacttgagaaatcaaaggaagcaactttagggtttagggtctttgat 4178704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 205
Target Start/End: Complemental strand, 4538983 - 4538779
Alignment:
Q  12 gcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgct 111  Q
    |||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||  |||||||||||||| |||| |||||||||    
T  4538983 gcaagttttcaggacaaggttggtcgtaccttggatcgtacgcaccaaacgtgtcacgatttggcaaaatatgacacgattttgacagctaaagactgct 4538884  T
Q  112 atataagtg-ttctttgcagattttgaag----------gagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtat 200  Q
    ||||||||| |||||||||||||||||||          ||||| | ||||||  |||||||||||||||||||||||||||| ||| ||||||| || |    
T  4538883 atataagtgtttctttgcagattttgaaggatagttcaagagaggtggaagaggcagaaacttgggaaatcaaaggaggtaattttaaggttgagagtct 4538784  T
Q  201 ttgat 205  Q
    |||||    
T  4538783 ttgat 4538779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 2 - 205
Target Start/End: Original strand, 29990780 - 29990984
Alignment:
Q  2 ggcttgctgggcaag-ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaac-gtgacacgattttgatag 99  Q
    ||||||||||||||| |||| |||||||| ||| | |||||||| |||||||||| ||| |||| ||||||| |||||||  |||||||||||| ||  |    
T  29990780 ggcttgctgggcaagatttttaggataagattgatcgtaccttgagtcgtacgcatcaatcgtggcacgattggggaaaaatgtgacacgatttcgac-g 29990878  T
Q  100 ctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggta 199  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||  ||  |||||||| |||||     
T  29990879 ctgaagattgctatataagtgttctttgcagattttgaaggtgagtttgaagagagagaaacttgggaaatcaaaggagacaactttagggtttagggtc 29990978  T
Q  200 tttgat 205  Q
    ||||||    
T  29990979 tttgat 29990984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 31733393 - 31733208
Alignment:
Q  1 cggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagc 100  Q
    |||||||||||||||||||||||||||||||||||            |||||||||||||||||| ||||||||||||||||||||||||||||||        
T  31733393 cggcttgctgggcaagttttcaggataaggttggt------------cgtacgcaccaaacgtgtaacgatttgggaaaacgtgacacgattttga---- 31733310  T
Q  101 tgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtat 200  Q
       |||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||| ||||||||| |||||||  |||| ||||||||| |    
T  31733309 ---agactgctatataagtgttctttgcagattttgaagaaaagctggaagagagagaaacttgagaaatcaaaagaggtaactttagagttgagggtct 31733213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 2 - 205
Target Start/End: Original strand, 35853638 - 35853844
Alignment:
Q  2 ggcttgctgggcaagtttt-caggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaa---cgtgacacgattttgat 97  Q
    ||||||||||||||||||| ||||||||||| ||| ||||||||| ||||||||| ||| |||| ||||||| | |||||   ||||||||||||||||     
T  35853638 ggcttgctgggcaagtttttcaggataaggtcggtcgtaccttggatcgtacgcatcaatcgtggcacgattggagaaaaaaacgtgacacgattttgac 35853737  T
Q  98 agctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgaggg 197  Q
     || |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||  | ||  |||||||| ||||    
T  35853738 -gcagaagacagctatataagtgttctttgcagattttgaagaagagcttgaagagagagaaacttaggaaatcaaaggtagcaactttagggtttaggg 35853836  T
Q  198 tatttgat 205  Q
    | ||||||    
T  35853837 tctttgat 35853844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 4 - 195
Target Start/End: Original strand, 33332074 - 33332265
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctga 103  Q
    |||||||||||  |||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||  ||  ||||||||||||||| || |||    
T  33332074 cttgctgggcacattttcaagataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttggacaattgtgacacgattttgacagttga 33332173  T
Q  104 agactgctatataagtg-ttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    |||||||||||| |||| |||||||||||||||||||||||||||  ||||| |||||||| |||   ||||||||||||  |||||||||||    
T  33332174 agactgctatattagtgtttctttgcagattttgaaggagagctttgagagatagaaactt-ggattacaaaggaggtaactttagggttgag 33332265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 21983703 - 21983580
Alignment:
Q  16 gttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatat 115  Q
    |||||||||||||||||||| |||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||  ||||||||| |||||||    
T  21983703 gttttcaggataaggttggtcgtaccttgggtcgtacgcaccaattgtgtcacgattt-ggaaaacgtgacacgattttgaccgctgaagacagctatat 21983605  T
Q  116 aagtgttctt-tgcagattttgaag 139  Q
    |||||||||| ||||||||||||||    
T  21983604 aagtgttcttgtgcagattttgaag 21983580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 27347648 - 27347743
Alignment:
Q  1 cggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttga 96  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  27347648 cggcttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacggtttgggaaaatgtgacacgattttga 27347743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 14 - 195
Target Start/End: Original strand, 44847760 - 44847940
Alignment:
Q  14 aagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctat 113  Q
    |||||||||||||||||||||| ||||||||||||||||| | ||| |||| |||||||| |||||||||| |||||||||   |||||||||| |||||    
T  44847760 aagttttcaggataaggttggtcgtaccttgggtcgtacgtatcaatcgtggcacgattt-ggaaaacgtggcacgattttatcagctgaagacggctat 44847858  T
Q  114 ataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    |||||||||||| || ||||||||  | |||||||||||||||||||||||||   || |||||||||||  |||||||||||    
T  44847859 ataagtgttcttgtgtagattttggtgaagagcttgaagagagagaaacttggattat-aaaggaggtaactttagggttgag 44847940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 78 - 205
Target Start/End: Original strand, 43864043 - 43864173
Alignment:
Q  78 aaacgtgacacgattttgatagctgaagactgctata---taagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaa 174  Q
    ||||||||||| ||||||| || ||||||||||||||   ||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||    
T  43864043 aaacgtgacacaattttgacagttgaagactgctataatataagtgttctttgtagattttgaagaatagcttgaagagagagaaacttgggaaatcaaa 43864142  T
Q  175 ggaggtaatgttagggttgagggtatttgat 205  Q
    ||||||||  |||||||||||||| ||||||    
T  43864143 ggaggtaactttagggttgagggtctttgat 43864173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 17 - 165
Target Start/End: Complemental strand, 79849 - 79699
Alignment:
Q  17 ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttggg-aaaacgtgacacgattttgatagctgaagactgctatat 115  Q
    ||||||||||||||||||| |||| ||||||| || ||||||| |  ||||||||||||  |||| ||||||||||| ||| || |||||||| ||||||    
T  79849 ttttcaggataaggttggtcgtacattgggtcatatgcaccaatcacgtcacgatttggacaaaatgtgacacgattctgacagttgaagactactatat 79750  T
Q  116 aagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgg 165  Q
    | |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  79749 atgtgttcttgtgcagattttgaaggagagcttgaagagagagaaacttgg 79699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 4 - 165
Target Start/End: Original strand, 4796293 - 4796455
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctga 103  Q
    |||| |||||| ||||||||||||  |||||| ||||||||| |||||||||||||| || |||| |||| |  |||||||||||||||||||||| |||    
T  4796293 cttgatgggcacgttttcaggatagagttggtcgtaccttggatcgtacgcaccaaatgtatcacaatttagacaaacgtgacacgattttgatagttga 4796392  T
Q  104 agactgctatataagtgtt-ctttgcagattttgaaggagagcttgaagagagagaaacttgg 165  Q
    ||| ||||||||||||||| || || ||||||||||| |||||||| || |||||||||||||    
T  4796393 agattgctatataagtgttcctgtgtagattttgaagaagagcttggagtgagagaaacttgg 4796455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 14 - 165
Target Start/End: Complemental strand, 2479798 - 2479647
Alignment:
Q  14 aagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctat 113  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||| | || || ||||| |||||||||| |||||||||   || ||||||||  |||    
T  2479798 aagttttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcatggcatgattt-ggaaaacgtggcacgattttatcagttgaagactagtat 2479700  T
Q  114 ataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgg 165  Q
    |||||||||||| ||||||||||| || |||||||||||||||||||||||||    
T  2479699 ataagtgttcttgtgcagattttggagaagagcttgaagagagagaaacttgg 2479647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 6360573 - 6360479
Alignment:
Q  1 cggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttg 95  Q
    ||||||| |||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  6360573 cggcttgttgggcaagttttcaggataatgttggtcgtatcttgggtcgtacgcaccaaacgtgtcacgatttgggaaattgtgacacgattttg 6360479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 204
Target Start/End: Original strand, 6570333 - 6570522
Alignment:
Q  16 gttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatat 115  Q
    ||||| |||||||||||| | |||||||||||| |||||| ||| |||||||||||||||  || ||||||||| |||||| | ||||| |||  | | |    
T  6570333 gtttttaggataaggttgatcgtaccttgggtcatacgcatcaaccgtgtcacgatttggccaatcgtgacacgtttttgacaactgaaaactattgttt 6570432  T
Q  116 aagtg-ttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttga 204  Q
    ||||| ||||||||| ||||||||||||||||| ||||| |  ||||||| |||||||||||||||||  ||||| ||||| || |||||    
T  6570433 aagtgtttctttgcatattttgaaggagagcttaaagaggggaaaacttgagaaatcaaaggaggtaactttaggattgagtgtctttga 6570522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 111 - 205
Target Start/End: Original strand, 19502013 - 19502107
Alignment:
Q  111 tatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||| |||||||  |||||||||||||| ||||||    
T  19502013 tatataaatgttctttgcagattttgaaggagagcttaaagagagacaaacttgagaaatcaaatgaggtaactttagggttgagggtctttgat 19502107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 4 - 125
Target Start/End: Complemental strand, 47264115 - 47263995
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctga 103  Q
    ||||||||  |||||||||||||||||||||| ||| ||||||||||||| | ||| | || |||||||| |||||||||| |||||||||   ||||||    
T  47264115 cttgctggttaagttttcaggataaggttggtcgtatcttgggtcgtacgtatcaatcttgacacgattt-ggaaaacgtggcacgattttatcagctga 47264017  T
Q  104 agactgctatataagtgttctt 125  Q
    ||||||||||||||||||||||    
T  47264016 agactgctatataagtgttctt 47263995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 19495696 - 19495811
Alignment:
Q  2 ggcttgctgggcaag-ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttggg-aaaacgtgacacgattttgatag 99  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||| |||| |||||| |||| ||||||||||||||||| ||  |    
T  19495696 ggcttgctgggcaagattttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtgacacgatctgggaaaaacgtgacacgatttcga-cg 19495794  T
Q  100 ctgaagactgctatata 116  Q
    |||||||||| ||||||    
T  19495795 ctgaagactgatatata 19495811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 92 - 152
Target Start/End: Complemental strand, 2759131 - 2759071
Alignment:
Q  92 tttgatagctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaaga 152  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2759131 tttgacagctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaaga 2759071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 32358495 - 32358403
Alignment:
Q  3 gcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttg 95  Q
    |||||||||||| ||||||||||||| |||| | ||||||||| ||||||||||||||||||||| ||||||| |||  ||||||||||||||    
T  32358495 gcttgctgggcacgttttcaggataaagttgatcgtaccttggatcgtacgcaccaaacgtgtcatgatttggaaaattgtgacacgattttg 32358403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 2389801 - 2389871
Alignment:
Q  3 gcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgattt 73  Q
    |||||||||| | |||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||    
T  2389801 gcttgctgggaacgttttcaggataaggttggtcgtaccttggatcgtacacaccaaacgtgtcacgattt 2389871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 496421 - 496342
Alignment:
Q  17 ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttga 96  Q
    |||||||||||||||||| | ||||||| |||||||||| ||| ||||||||||||| || |||||||| ||||||||||    
T  496421 ttttcaggataaggttggatttaccttgagtcgtacgcatcaaccgtgtcacgattttgggaaacgtgatacgattttga 496342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 4253830 - 4253771
Alignment:
Q  144 gcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttg 203  Q
    |||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  4253830 gctttaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtatttg 4253771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 43863999 - 43864049
Alignment:
Q  14 aagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtg 64  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  43863999 aagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtg 43864049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 25767349 - 25767222
Alignment:
Q  48 cgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatataagtgttctt-tgcagattttgaaggagagct 146  Q
    |||||| ||||| |||| ||||| |||| ||| ||||||||||||||   |   |||||||  ||| ||||||||||| |||||||||||||||||||||    
T  25767349 cgtacgtaccaatcgtgacacgacttgg-aaatcgtgacacgattttatcaatggaagactagtatttaagtgttcttgtgcagattttgaaggagagct 25767251  T
Q  147 tgaagagagagaaacttgggaaatcaaagg 176  Q
     ||||||||||||||||| |||||||||||    
T  25767250 -gaagagagagaaacttgagaaatcaaagg 25767222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 12098175 - 12098111
Alignment:
Q  141 agagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    ||||||| |||||||| |||||||||||||||||||||||||  |||||||||||||| ||||||    
T  12098175 agagcttcaagagagaaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgat 12098111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 41317750 - 41317686
Alignment:
Q  141 agagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    ||||||| |||||||||||||| |||||||||||||||||||  |||||||||||||| ||||||    
T  41317750 agagcttcaagagagagaaactagggaaatcaaaggaggtaactttagggttgagggtctttgat 41317686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 36146725 - 36146661
Alignment:
Q  141 agagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    ||||||| |||||||| |||||||||||||||||||||||||  |||| ||||||||| ||||||    
T  36146725 agagcttcaagagagaaaaacttgggaaatcaaaggaggtaactttagtgttgagggtctttgat 36146661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 195
Target Start/End: Complemental strand, 3047603 - 3047536
Alignment:
Q  128 cagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    |||||||||||| ||||||| |||||||||||||||||||   ||||||||||||  |||||||||||    
T  3047603 cagattttgaagaagagctttaagagagagaaacttgggattacaaaggaggtaactttagggttgag 3047536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 115 - 205
Target Start/End: Original strand, 39731215 - 39731305
Alignment:
Q  115 taagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    ||||||||||| |||||||||||||| |||| | |||||||||||||||||||||||||||||  ||||   ||||||| ||||| ||||||    
T  39731215 taagtgttcttgtgcagattttgaag-agagttggaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggtctttgat 39731305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 24526201 - 24526136
Alignment:
Q  140 gagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||||||| |||||||| ||||| ||||||||||||||| |||  |||||||||||||| ||||||    
T  24526201 gagagcttcaagagagaaaaactagggaaatcaaaggagataactttagggttgagggtctttgat 24526136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 38671526 - 38671461
Alignment:
Q  140 gagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||| ||| |||||||  |||||||||||||||||||||||||  |||||||||||||| ||||||    
T  38671526 gagaacttcaagagaggaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgat 38671461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 31105696 - 31105632
Alignment:
Q  141 agagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    ||||||| |||||||  ||||||| |||||||||||||||||  |||||||||||||| ||||||    
T  31105696 agagcttcaagagaggaaaacttgagaaatcaaaggaggtaactttagggttgagggtctttgat 31105632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 81 - 176
Target Start/End: Original strand, 48408608 - 48408702
Alignment:
Q  81 cgtgacacgattttgatagctgaagactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaagg 176  Q
    ||||||||||||||   ||  |||||||  ||| ||||||||||| |||||||||||||| |||||  |||||||||||||||||||||||||||||    
T  48408608 cgtgacacgattttatcagtggaagactagtatttaagtgttcttgtgcagattttgaag-agagcg-gaagagagagaaacttgggaaatcaaagg 48408702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 195
Target Start/End: Complemental strand, 20284456 - 20284371
Alignment:
Q  110 ctatataagtgtt-ctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    ||||||||||||| ||||||| |||||||||||||| ||  ||||||||||||||||   || |||||||||||  |||||||||||    
T  20284456 ctatataagtgtttctttgcaaattttgaaggagagttttgagagagagaaacttggattat-aaaggaggtaactttagggttgag 20284371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 95
Target Start/End: Original strand, 29608292 - 29608342
Alignment:
Q  45 ggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttg 95  Q
    |||||||||||||||||||||||| |||| ||||| | |||||||||||||    
T  29608292 ggtcgtacgcaccaaacgtgtcacaatttaggaaatcatgacacgattttg 29608342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 36574811 - 36574753
Alignment:
Q  149 aagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgatga 207  Q
    |||||||||||| ||| |||||||||||||||||  |||||||||| ||| ||||||||    
T  36574811 aagagagagaaaattgagaaatcaaaggaggtaactttagggttgacggtctttgatga 36574753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 3050569 - 3050492
Alignment:
Q  18 tttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttg 95  Q
    |||| ||||||  ||||| ||||||||||||||||||| ||| |||| ||  |||||| ||| |||||||||||||||    
T  3050569 tttctggataatattggtcgtaccttgggtcgtacgcatcaatcgtgacatcatttggaaaatcgtgacacgattttg 3050492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 182
Target Start/End: Complemental strand, 23565363 - 23565322
Alignment:
Q  141 agagcttgaagagagagaaacttgggaaatcaaaggaggtaa 182  Q
    ||||||| ||||||||||||||||||| ||||||||||||||    
T  23565363 agagcttcaagagagagaaacttgggatatcaaaggaggtaa 23565322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 8153194 - 8153258
Alignment:
Q  141 agagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    ||||||| |||||||||||||| || ||||||||||||||||  ||| ||||| |||| ||||||    
T  8153194 agagcttcaagagagagaaactaggaaaatcaaaggaggtaactttaaggttgggggtctttgat 8153258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 195
Target Start/End: Complemental strand, 2580744 - 2580671
Alignment:
Q  121 ttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    ||||||||||||||||||| |||| ||  |||||||||||||| |||   ||||||||||||  |||||||||||    
T  2580744 ttctttgcagattttgaagtagaggttttagagagagaaactt-ggattgcaaaggaggtaactttagggttgag 2580671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 148
Target Start/End: Complemental strand, 18409218 - 18409102
Alignment:
Q  32 tggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatataagtgttctt-tgcag 130  Q
    |||| |||||||| | |||||| ||||| |||| ||||| |||| ||| ||||||||||||||   ||  |||||||  ||| ||||||||||  |||||    
T  18409218 tggtcgtaccttgtgacgtacgtaccaatcgtgacacgacttgg-aaatcgtgacacgattttatcagtggaagactagtatttaagtgttctcgtgcag 18409120  T
Q  131 attttgaaggagagcttg 148  Q
    |||||| |||||||||||    
T  18409119 attttggaggagagcttg 18409102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 205
Target Start/End: Original strand, 31518659 - 31518724
Alignment:
Q  140 gagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||||||| |||||||  |||||| |||||||||||||| |||  |||||||| ||||| ||||||    
T  31518659 gagagcttcaagagaggaaaactttggaaatcaaaggagataactttagggttaagggtctttgat 31518724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 122
Target Start/End: Complemental strand, 2759041 - 2759009
Alignment:
Q  90 attttgatagctgaagactgctatataagtgtt 122  Q
    ||||||| |||||||||||||||||||||||||    
T  2759041 attttgacagctgaagactgctatataagtgtt 2759009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 176
Target Start/End: Complemental strand, 43504444 - 43504416
Alignment:
Q  148 gaagagagagaaacttgggaaatcaaagg 176  Q
    |||||||||||||||||||||||||||||    
T  43504444 gaagagagagaaacttgggaaatcaaagg 43504416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 169; Significance: 8e-91; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 13487928 - 13488132
Alignment:
Q  1 cggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagc 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||    
T  13487928 cggcttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacaattttgacagc 13488027  T
Q  101 tgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtat 200  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||| |    
T  13488028 tgaagactgttatataagtgttttttgcagattttgaaggagagctagaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtct 13488127  T
Q  201 ttgat 205  Q
    |||||    
T  13488128 ttgat 13488132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 5 - 205
Target Start/End: Complemental strand, 42426674 - 42426474
Alignment:
Q  5 ttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaa 104  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||    
T  42426674 ttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacatgtcacgatttgggaaaacgtgacacaattttgacagctgaa 42426575  T
Q  105 gactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttga 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||| |||||    
T  42426574 gactgctatataagtgttctttgcagattttgaaggagagcttgaaaagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttga 42426475  T
Q  205 t 205  Q
    |    
T  42426474 t 42426474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 4 - 205
Target Start/End: Original strand, 32636551 - 32636753
Alignment:
Q  4 cttgctgggcaagtttt-caggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctg 102  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  32636551 cttgctgggcaagtttttcaggataaggttggtcgtaccttgggtcttacgcaccaaacgtgtcacgatttgggaaaacgtgacatgattttgacagctg 32636650  T
Q  103 aagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtattt 202  Q
    || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||  |||||||| ||||| |||    
T  32636651 aaaactgctatataagtgttctttgcagattttgaaggagagcttggagagagagaaacttgagaaatcaaaggaggtaactttagggttaagggtcttt 32636750  T
Q  203 gat 205  Q
    |||    
T  32636751 gat 32636753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 19806131 - 19806294
Alignment:
Q  1 cggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagc 100  Q
    ||||||||| |||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||    
T  19806131 cggcttgctaggcacgtttttaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgacttgggaaaacgtgacacgattttgacagc 19806230  T
Q  101 tgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttg 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19806231 tgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttg 19806294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 533506 - 533698
Alignment:
Q  1 cggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagc 100  Q
    |||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  533506 cggcttgctgggcaagttttcaggataaggttggt------------cgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgacagc 533593  T
Q  101 tgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtat 200  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||  ||||||||| |||| |    
T  533594 tgaagactgctatataagtgttttttgcagattttgaaggagaggttgaagagagagaaatttgggaaatcaaaggaggtaactttagggttgggggtct 533693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 45 - 205
Target Start/End: Complemental strand, 42428829 - 42428669
Alignment:
Q  45 ggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatataagtgttctttgcagattttgaaggagag 144  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||    
T  42428829 ggtcgtacgcaccaaacgtgtcacgatttaggaaaacctgacacgattttgacaactgaagactgctatataaatgttctttgcagattttgaaggagag 42428730  T
Q  145 cttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||||||||||||||||||||||||||||||||| |||  |||||||||| ||| ||||||    
T  42428729 cttgaagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgat 42428669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 4 - 205
Target Start/End: Original strand, 13239480 - 13239681
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttg-ggaaaacgtgacacgattttgatagctg 102  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||| |||| |||||||   |||||||||||||| |||||||  ||||    
T  13239480 cttgctggacaagttttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtgacacgattgatggaaaacgtgacacaattttgac-gctg 13239578  T
Q  103 aagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtattt 202  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| | ||||||||||||||||  ||| |||||||||| |||    
T  13239579 aagactgctatataagtgttctttgcagattttgaagtagagtttgaagagagagaaacttagaaaatcaaaggaggtaactttatggttgagggtcttt 13239678  T
Q  203 gat 205  Q
    |||    
T  13239679 gat 13239681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 2 - 205
Target Start/End: Original strand, 25412487 - 25412691
Alignment:
Q  2 ggcttgctgggcaag-ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaa-cgtgacacgattttgatag 99  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||| ||| |||| ||||||| ||||||| ||||||||||||| ||  |    
T  25412487 ggcttgctgggcaagattttcaggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgattggggaaaaacgtgacacgatttcgac-g 25412585  T
Q  100 ctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggta 199  Q
    | ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||| |||||     
T  25412586 cagaagacatctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggcaacattagggtttagggtc 25412685  T
Q  200 tttgat 205  Q
    ||||||    
T  25412686 tttgat 25412691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 2 - 198
Target Start/End: Original strand, 13342786 - 13342983
Alignment:
Q  2 ggcttgctgggcaag-ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaa-cgtgacacgattttgatag 99  Q
    ||||||||||||||| ||||||||||||||||||| ||||||| | ||||||||| ||| |||| ||||||| ||||||| ||||||||||||||||  |    
T  13342786 ggcttgctgggcaagattttcaggataaggttggtcgtaccttagatcgtacgcatcaatcgtggcacgattggggaaaaacgtgacacgattttgag-g 13342884  T
Q  100 ctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggt 198  Q
    | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||  |||||||| |||||    
T  13342885 cagaagacagctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaagcaactttagggtttagggt 13342983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 2 - 198
Target Start/End: Original strand, 37438871 - 37439070
Alignment:
Q  2 ggcttgctgggcaag-ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttg---ggaaaacgtgacacgattttgat 97  Q
    |||||| |||||||| |||||||||||||||| || ||||||||||||||||||| ||| |||| ||||||| |     |||||||||||| ||||||||    
T  37438871 ggcttgttgggcaagattttcaggataaggtttgtcgtaccttgggtcgtacgcatcaatcgtgacacgattggaaaaaaaaacgtgacacaattttgat 37438970  T
Q  98 agctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgaggg 197  Q
     | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||  |||||||||||||    
T  37438971 -gttgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttggaaaatcaaatgaggtaactttagggttgaggg 37439069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 45 - 205
Target Start/End: Complemental strand, 30683319 - 30683159
Alignment:
Q  45 ggtcgtacgcaccaaacgtgtcacgattt-gggaaaacgtgacacgattttgatagctgaagactgctatataagtgttctttgcagattttgaaggaga 143  Q
    ||||||||||| ||| |||| ||| |||| |||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||    
T  30683319 ggtcgtacgcatcaatcgtgacacaattttgggaaaacgtgacacgattttgac-gctgaaaactgctatataagtgttctttgcagattttgaaggaga 30683221  T
Q  144 gcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||    
T  30683220 gcttgaagagagagaaacttgggaaatcagaggaggtaattttagggttgagggtctttgat 30683159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 16 - 195
Target Start/End: Original strand, 11916608 - 11916787
Alignment:
Q  16 gttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatat 115  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||| || |||| ||||||||||    
T  11916608 gttttcaggatcaggttggtcgtaccttgggtcgtacgcaccaatcgtatcacgatttgagaaaacgtgacacgattttgacagttgaaaactgctatat 11916707  T
Q  116 aagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||| |||   ||||||||||||  |||||||||||    
T  11916708 aagtgttcttgtgcagattttgaaggagagcttgaagtgagagaaactt-ggattacaaaggaggtaactttagggttgag 11916787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 58 - 205
Target Start/End: Complemental strand, 28751042 - 28750894
Alignment:
Q  58 aaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagaga 156  Q
    ||||||| ||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  28751042 aaacgtgacacaatttgggaaaacgtgacacgattttgacagctgaagtctgctatataagtgttcttatgcagattttgaaagagagcttgaagagaga 28750943  T
Q  157 gaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    ||||||||||||||||||||||||||  |||||||||||||| ||||||    
T  28750942 gaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgat 28750894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 2 - 177
Target Start/End: Original strand, 30182313 - 30182490
Alignment:
Q  2 ggcttgctgggcaag-ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttggg--aaaacgtgacacgattttgata 98  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||| ||| |||| ||||||| |||  ||||||||||||||||||||      
T  30182313 ggcttgctgggcaagattttcaggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgattgggggaaaaacgtgacacgattttgac- 30182411  T
Q  99 gctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaagga 177  Q
    || |||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  30182412 gcagaagacagctataaaagtgttctttgcagattttgaatgagagcttgaagagagagaaacttgggaaatcaaagga 30182490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 2 - 205
Target Start/End: Complemental strand, 36074487 - 36074283
Alignment:
Q  2 ggcttgctgggcaag-ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaa-cgtgacacgattttgatag 99  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||| ||||||||| ||| | || ||||||| || |||| ||||||| ||||||||  |    
T  36074487 ggcttgttgggcaagattttcaggataaggttggtcgtaccttggatcgtacgcatcaatcatggcacgattgggaaaaaacgtgacatgattttgac-g 36074389  T
Q  100 ctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggta 199  Q
    | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||  |||||||| |||||     
T  36074388 cagaagacagctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaagcaactttagggtttagggtc 36074289  T
Q  200 tttgat 205  Q
    ||||||    
T  36074288 tttgat 36074283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 16 - 195
Target Start/End: Original strand, 12083814 - 12083992
Alignment:
Q  16 gttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatat 115  Q
    |||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| |||||||||||||| ||||||| || |||||||||||||||    
T  12083814 gttttcaggataaggttggtcgtaccttgggtcgtatgcaccaatcgtgtcacgattt-ggaaaacgtgacacaattttgacagttgaagactgctatat 12083912  T
Q  116 aagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    |||||||||| ||||||||||||||||||||| |||| ||||||||||| |||   ||||||||||||  |||||||||||    
T  12083913 aagtgttcttgtgcagattttgaaggagagctagaagtgagagaaactt-ggattacaaaggaggtaactttagggttgag 12083992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 16 - 163
Target Start/End: Complemental strand, 14520690 - 14520543
Alignment:
Q  16 gttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatat 115  Q
    |||||||||||||||||||| |||||||||||||||||||  || ||||||||||||| |||||||||||||||||||||| ||||| ||||| ||||||    
T  14520690 gttttcaggataaggttggtcgtaccttgggtcgtacgcattaatcgtgtcacgattt-ggaaaacgtgacacgattttgacagctggagactcctatat 14520592  T
Q  116 aagtgttctt-tgcagattttgaaggagagcttgaagagagagaaactt 163  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14520591 aagtgttcttgtgcagattttgaaggagagcttgaagagagagaaactt 14520543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 23 - 205
Target Start/End: Complemental strand, 16650044 - 16649861
Alignment:
Q  23 ggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatataagtg-t 121  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||||||||||||| |||| |||||| |||||||| |||| |||||| ||||||||||| |    
T  16650044 ggataaggttggtcgtaccttggatcgtacgcaccaaccgtgtcacgatttggcaaaatgtgacatgattttgacagctaaagactactatataagtgtt 16649945  T
Q  122 tctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    ||||||||||||||||| || || || |||||||  |||||||||||||||||||||||||  |||||||||| ||| ||||||    
T  16649944 tctttgcagattttgaatgataggttcaagagaggaaaacttgggaaatcaaaggaggtaactttagggttgatggtctttgat 16649861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 27015041 - 27015133
Alignment:
Q  3 gcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttg 95  Q
    ||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  27015041 gcttgttgggcatgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgacacgattttg 27015133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 4 - 165
Target Start/End: Original strand, 9352959 - 9353118
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctga 103  Q
    ||||||||  |||||||||||||||||||||| ||||||||||||||||  | ||| |||| |||||||| |||||||||| |||||||||   ||||||    
T  9352959 cttgctggttaagttttcaggataaggttggtcgtaccttgggtcgtacatatcaatcgtggcacgattt-ggaaaacgtggcacgattttatcagctga 9353057  T
Q  104 agactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgg 165  Q
    |||||| ||| ||||||||||| |||||||||||  ||||||  |||||||||||||||||||    
T  9353058 agactggtatttaagtgttcttgtgcagattttg--ggagaggatgaagagagagaaacttgg 9353118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 108
Target Start/End: Complemental strand, 16651050 - 16650958
Alignment:
Q  16 gttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagact 108  Q
    |||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||| |||| ||||||||||||||| |||| ||||||    
T  16651050 gttttcaggataaggttggtcgtaccttggatcgtacgcaccaaccgtgtcacgatttggcaaaatgtgacacgattttgacagctaaagact 16650958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 165
Target Start/End: Original strand, 36931984 - 36932134
Alignment:
Q  14 aagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctat 113  Q
    |||||||||||||||||||||| ||||||||||||||||| | ||| |||| ||| |||| | ||| |||| |||||||||   |||||||||||| |||    
T  36931984 aagttttcaggataaggttggtcgtaccttgggtcgtacgtatcaatcgtgacacaattt-gaaaatcgtggcacgattttatcagctgaagactggtat 36932082  T
Q  114 ataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgg 165  Q
     ||||||||||| ||||| ||||| |||||||| |||||||||||||||||||    
T  36932083 ttaagtgttcttgtgcagtttttggaggagagc-tgaagagagagaaacttgg 36932134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 5057567 - 5057650
Alignment:
Q  12 gcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttg 95  Q
    |||||||||||||||||||||||| ||||||| ||||||||||| ||| |||||||| ||||||||||||||||||||||||||    
T  5057567 gcaagttttcaggataaggttggtcgtacctttggtcgtacgcatcaaccgtgtcacaatttgggaaaacgtgacacgattttg 5057650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 535628 - 535700
Alignment:
Q  1 cggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgattt 73  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  535628 cggcttgctggacaagttttcaggataaggttggtcgtaccttgggtcgtatgcaccaaacgtgtcacgattt 535700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 39468862 - 39468795
Alignment:
Q  131 attttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggt 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  39468862 attttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggt 39468795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 24 - 165
Target Start/End: Original strand, 11181474 - 11181618
Alignment:
Q  24 gataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctga---agactgctatataagtg 120  Q
    ||||||||||||  |||| ||||| ||||| | ||| |||||||| ||||||  || ||||||||  |||| | ||||||   |||||| ||||||||||    
T  11181474 gataaggttggtcataccgtgggttgtacgtatcaaccgtgtcacaatttggtcaatcgtgacacattttttacagctgatgaagactgttatataagtg 11181573  T
Q  121 ttctttgcagattttgaaggagagcttgaagagagagaaacttgg 165  Q
    |||||||||| |||||||| |||||||||||||||||||||||||    
T  11181574 ttctttgcagtttttgaagtagagcttgaagagagagaaacttgg 11181618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 31004777 - 31004868
Alignment:
Q  4 cttgctgggcaagttttc-aggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgatttt 94  Q
    ||||||||||| |||||  ||||||||||||||||||| |||||||||||||||||| |||||||||||||||  |||||||||||| ||||    
T  31004777 cttgctgggcacgttttttaggataaggttggttgtactttgggtcgtacgcaccaatcgtgtcacgatttggacaaacgtgacacgttttt 31004868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 38746535 - 38746606
Alignment:
Q  24 gataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttg 95  Q
    |||||||||||| |||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||    
T  38746535 gataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacaatttgggaaatcatgacacgattttg 38746606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 86 - 153
Target Start/End: Original strand, 535693 - 535760
Alignment:
Q  86 cacgattttgatagctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagag 153  Q
    ||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||    
T  535693 cacgattttgacagctgaagactgatatataattgttctttgcagattttgaaggagaggttgaagag 535760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 39468975 - 39468903
Alignment:
Q  1 cggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgattt 73  Q
    ||||||||||| || ||||| |||||||||||||| ||||||||||||||| ||||||||||||||| |||||    
T  39468975 cggcttgctggacacgtttttaggataaggttggtcgtaccttgggtcgtatgcaccaaacgtgtcatgattt 39468903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 24 - 205
Target Start/End: Original strand, 42926641 - 42926822
Alignment:
Q  24 gataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatataagtgtt- 122  Q
    |||||||||| ||||| ||||  ||||||| |  ||| ||| |||||||| || || |||||||||||||||| |  || ||| | |||| ||||||||     
T  42926641 gataaggttg-ttgtatcttgaatcgtacgtataaaatgtgacacgattttggcaatcgtgacacgattttgacacttgcagagtactatttaagtgttt 42926739  T
Q  123 ctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    || | ||||||||| | |||||||| |||||||| ||||||||||||||||| |||||||  ||||| |||| ||| ||||||    
T  42926740 ctgttcagattttggatgagagcttcaagagagaaaaacttgggaaatcaaatgaggtaactttaggattgatggtctttgat 42926822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 45 - 165
Target Start/End: Complemental strand, 15464965 - 15464845
Alignment:
Q  45 ggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatataagtgttctt-tgcagattttgaaggaga 143  Q
    ||||||||| | ||| |||| |||||||||| ||| |||| |||||||||   ||  |||||||  ||| ||||||||||| ||||||||||| ||||||    
T  15464965 ggtcgtacgtatcaatcgtgacacgatttgg-aaatcgtggcacgattttatcagtagaagactagtatttaagtgttcttgtgcagattttggaggaga 15464867  T
Q  144 gcttgaagagagagaaacttgg 165  Q
    ||||||||||||||||||||||    
T  15464866 gcttgaagagagagaaacttgg 15464845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 5887720 - 5887655
Alignment:
Q  140 gagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||| ||| |||||||  |||||||||||||||||||||||||  |||||||||||||||||||||    
T  5887720 gagaacttcaagagaggaaaacttgggaaatcaaaggaggtaactttagggttgagggtatttgat 5887655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 61 - 176
Target Start/End: Original strand, 10593050 - 10593166
Alignment:
Q  61 cgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatataagtgttctt-tgcagattttgaag-gagagcttgaagagagaga 158  Q
    |||| |||||||||||||| |||||||||||||  | ||  |||||||  ||| ||||||||||| |||||| ||||||| ||||| | |||||||||||    
T  10593050 cgtgacacgatttgggaaatcgtgacacgatttcaacagaggaagactagtatgtaagtgttcttgtgcaga-tttgaagagagagttggaagagagaga 10593148  T
Q  159 aacttgggaaatcaaagg 176  Q
     |||||||||||||||||    
T  10593149 gacttgggaaatcaaagg 10593166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 17003689 - 17003745
Alignment:
Q  110 ctatataagtgtt-ctttgcagattttgaaggagagcttgaagagagagaaacttgg 165  Q
    ||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||    
T  17003689 ctatataagtgtttctttgcagattttgaaggagagctttgagagagagaaacttgg 17003745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 9789546 - 9789485
Alignment:
Q  115 taagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaagg 176  Q
    ||||||||||| ||||||||| ||||||||| | |||||||||||||||||||||||||||||    
T  9789546 taagtgttcttgtgcagattt-gaaggagagttggaagagagagaaacttgggaaatcaaagg 9789485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 16409321 - 16409382
Alignment:
Q  115 taagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaagg 176  Q
    ||||||||||| |||||||||||||| |||| | |||||||||||||||||||||||||||||    
T  16409321 taagtgttcttgtgcagattttgaag-agagttggaagagagagaaacttgggaaatcaaagg 16409382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 18441970 - 18441909
Alignment:
Q  115 taagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaagg 176  Q
    ||||||||||| ||||||||| ||||||||| | |||||||||||||||||||||||||||||    
T  18441970 taagtgttcttgtgcagattt-gaaggagagttggaagagagagaaacttgggaaatcaaagg 18441909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 26170620 - 26170681
Alignment:
Q  115 taagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaagg 176  Q
    ||||||||||| |||||||||||||| |||| | |||||||||||||||||||||||||||||    
T  26170620 taagtgttcttgtgcagattttgaag-agagttggaagagagagaaacttgggaaatcaaagg 26170681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 537901 - 537954
Alignment:
Q  152 agagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||||||||||||| ||||||||||||||||  |||||||||||||| ||||||    
T  537901 agagagaaacttggaaaatcaaaggaggtaactttagggttgagggtctttgat 537954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 205
Target Start/End: Original strand, 16451937 - 16452010
Alignment:
Q  132 ttttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||||| | ||||||| |||||||  |||||||||||||||||||||||||  |||||||||||| | ||||||    
T  16451937 ttttgaggaagagcttcaagagaggaaaacttgggaaatcaaaggaggtaactttagggttgaggatctttgat 16452010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 176
Target Start/End: Original strand, 26177647 - 26177790
Alignment:
Q  32 tggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatataagtgttcttt-gcag 130  Q
    |||| |||||||||| || ||||||||| |||| |||||  ||| ||| ||||||||||||||   ||  || | ||  ||| |||||||||||  ||||    
T  26177647 tggtcgtaccttgggacggacgcaccaatcgtgacacgacctgg-aaatcgtgacacgattttatcagtggagggctagtatttaagtgttcttgcgcag 26177745  T
Q  131 attttgaaggagagcttgaagagagagaaacttgggaaatcaaagg 176  Q
    ||||||||| |||| | |||||||||||||||||||||||||||||    
T  26177746 attttgaag-agagttggaagagagagaaacttgggaaatcaaagg 26177790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 205
Target Start/End: Original strand, 31182837 - 31182902
Alignment:
Q  140 gagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||| ||| |||||||  |||||||||||||||||||||||||  |||||||||||||| ||||||    
T  31182837 gagaacttcaagagaggaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgat 31182902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 176
Target Start/End: Original strand, 29720228 - 29720271
Alignment:
Q  133 tttgaaggagagcttgaagagagagaaacttgggaaatcaaagg 176  Q
    |||||||||||| | |||||||||||||||||||||||||||||    
T  29720228 tttgaaggagagttggaagagagagaaacttgggaaatcaaagg 29720271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 205
Target Start/End: Complemental strand, 42310354 - 42310174
Alignment:
Q  24 gataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatataagtgtt- 122  Q
    |||||||||||||||| ||||| | ||||||| |||  ||| |||  ||| |  || ||||| |||||||||| || || ||  |||||||||||| ||     
T  42310354 gataaggttggttgtatcttggattgtacgcatcaattgtgacacagttttgccaatcgtgatacgattttgacagttgcagggtgctatataagtcttt 42310255  T
Q  123 ctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    || | ||||||||||  ||||   | || |||||||||||||||||||||||||||||||  |||||||| | ||| ||||||    
T  42310254 ctattcagattttgatagagaa--taaaaagagagaaacttgggaaatcaaaggaggtaactttagggtttatggtctttgat 42310174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 29722370 - 29722431
Alignment:
Q  115 taagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaagg 176  Q
    ||||||||||| ||||||||| ||||||||| | ||| |||||||||||||||||||||||||    
T  29722370 taagtgttcttgtgcagattt-gaaggagagttggaaaagagagaaacttgggaaatcaaagg 29722431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 205
Target Start/End: Complemental strand, 3075953 - 3075897
Alignment:
Q  149 aagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||||||  |||||| ||||||||||||||||||  |||||||||||||| ||||||    
T  3075953 aagagagtaaaactttggaaatcaaaggaggtaactttagggttgagggtctttgat 3075897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 40146822 - 40146858
Alignment:
Q  37 gtaccttgggtcgtacgcaccaaacgtgtcacgattt 73  Q
    |||||||||||||||| ||||||||||||||||||||    
T  40146822 gtaccttgggtcgtactcaccaaacgtgtcacgattt 40146858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 176
Target Start/End: Complemental strand, 29751464 - 29751421
Alignment:
Q  133 tttgaaggagagcttgaagagagagaaacttgggaaatcaaagg 176  Q
    |||||||||||| | ||||||||||| |||||||||||||||||    
T  29751464 tttgaaggagagttggaagagagagagacttgggaaatcaaagg 29751421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 33831562 - 33831609
Alignment:
Q  158 aaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    ||||||||||||||||||||| |||| |||||||| ||||| ||||||    
T  33831562 aaacttgggaaatcaaaggagttaattttagggttaagggtctttgat 33831609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 194
Target Start/End: Complemental strand, 9049655 - 9049605
Alignment:
Q  144 gcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttga 194  Q
    |||| |||||||||||||||| ||||||||||||| |||  ||||||||||    
T  9049655 gcttcaagagagagaaacttgagaaatcaaaggagataactttagggttga 9049605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 176
Target Start/End: Original strand, 16407897 - 16407946
Alignment:
Q  126 tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaagg 176  Q
    |||||||||||||| |||| | |||||||||||||||||| ||||||||||    
T  16407897 tgcagattttgaag-agagttggaagagagagaaacttggaaaatcaaagg 16407946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 35
Target Start/End: Complemental strand, 42428860 - 42428827
Alignment:
Q  2 ggcttgctgggcaagttttcaggataaggttggt 35  Q
    ||||||||||||||||||| ||||||||||||||    
T  42428860 ggcttgctgggcaagtttttaggataaggttggt 42428827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 3076024 - 3075976
Alignment:
Q  45 ggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattt 93  Q
    ||||||||||| |||  |||||||||||||| ||| |||||||||||||    
T  3076024 ggtcgtacgcatcaactgtgtcacgatttggcaaatcgtgacacgattt 3075976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 165
Target Start/End: Original strand, 31300337 - 31300381
Alignment:
Q  121 ttctttgcagattttgaaggagagcttgaagagagagaaacttgg 165  Q
    ||||||||||||||||||| |||| ||  ||||||||||||||||    
T  31300337 ttctttgcagattttgaagaagaggttttagagagagaaacttgg 31300381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 169; Significance: 8e-91; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 37740351 - 37740555
Alignment:
Q  1 cggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagc 100  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||    
T  37740351 cggcttgcagggcaagttttcaggataaggttggtcgtaccttgggtcgtacacaccaaatgtgtcacgatttgggaaaacgtgacacgattttgacagc 37740450  T
Q  101 tgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||| |    
T  37740451 tgaagactgctatataagtgttctttgcagattttgaaggagagcatgaagagagagaaacttgggaaatcaaaggaggtaagtttagggttgagggtct 37740550  T
Q  201 ttgat 205  Q
    |||||    
T  37740551 ttgat 37740555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 34570857 - 34570653
Alignment:
Q  1 cggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagc 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  34570857 cggcttgctggacaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgacagc 34570758  T
Q  101 tgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtat 200  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||   |||||||||||||| |    
T  34570757 tgaagactactatatatgtgttctttgcagattttgaaggagagctggaacagagagaaacttgggaaatcaaaggaggtagctttagggttgagggtct 34570658  T
Q  201 ttgat 205  Q
    |||||    
T  34570657 ttgat 34570653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 54200349 - 54200145
Alignment:
Q  1 cggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagc 100  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||    
T  54200349 cggcttgctgggcaagttttcaagataaggttggtcgtaccttgggtcgtacgcaccaaactagtcacgatttgggaaaatgtgacacgattttgatagc 54200250  T
Q  101 tgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtat 200  Q
    ||||||||||||||||||||||||||| || |||||||| ||||||  ||||||||||||||| ||||||||||||||||||  |||||||||||||| |    
T  54200249 tgaagactgctatataagtgttctttgtagtttttgaagaagagctgaaagagagagaaacttaggaaatcaaaggaggtaactttagggttgagggtct 54200150  T
Q  201 ttgat 205  Q
    |||||    
T  54200149 ttgat 54200145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 9927904 - 9927696
Alignment:
Q  1 cggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacac-gattttgatag 99  Q
    ||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||  ||    
T  9927904 cggcttgctggacaagttttcaggataaggttggtcgttccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacaaattttggcag 9927805  T
Q  100 c---tgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagg 196  Q
    |   |||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  9927804 ctgatgaagactgctaaataagtgttctctgcagattttgaaggagggcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagg 9927705  T
Q  197 gtatttgat 205  Q
    || ||||||    
T  9927704 gtctttgat 9927696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 29254219 - 29254422
Alignment:
Q  1 cggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagc 100  Q
    ||||||| ||||||||| ||||| ||||||||||| |||  |||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  29254219 cggcttgttgggcaagtattcagaataaggttggtcgtattttggatcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacgattttgacagc 29254318  T
Q  101 tgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtat 200  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||| |||  |||||||||| ||| |    
T  29254319 tgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtct 29254418  T
Q  201 ttga 204  Q
    ||||    
T  29254419 ttga 29254422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 3 - 205
Target Start/End: Original strand, 5429407 - 5429608
Alignment:
Q  3 gcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctg 102  Q
    ||||| ||| |||||||||||| |||| ||||| ||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||  ||||    
T  5429407 gcttgttggacaagttttcaggttaagattggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatgtgggaaaacatgacacgattttgac-gctg 5429505  T
Q  103 aagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtattt 202  Q
    || ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||| |||    
T  5429506 aaaactgctatataagtgttctttgcagaccttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaagtaactttagggttgagggtcttt 5429605  T
Q  203 gat 205  Q
    |||    
T  5429606 gat 5429608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 45 - 205
Target Start/End: Complemental strand, 26176035 - 26175875
Alignment:
Q  45 ggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatataagtgttctttgcagattttgaaggagag 144  Q
    ||||||||||||||||||||||| ||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  26176035 ggtcgtacgcaccaaacgtgtcatgatttagcaaaacgtgacacgattttgacagctgaagactgctatataagtgttctttgcagattttgaaggagag 26175936  T
Q  145 cttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    ||||||||||||||||||||||||||||||||||||||  |||| ||||||||| ||||||    
T  26175935 cttgaagagagagaaacttgggaaatcaaaggaggtaactttagagttgagggtctttgat 26175875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 4 - 165
Target Start/End: Original strand, 36314854 - 36315016
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctga 103  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||| ||||||    
T  36314854 cttgctgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttggacaaacgtgacacgattttgacagctga 36314953  T
Q  104 agactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgg 165  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  36314954 agactgctatataagtgttcttgtgcagattttgaaggagagcttgaagagagataaacttgg 36315016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 4 - 165
Target Start/End: Original strand, 36329063 - 36329225
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctga 103  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||| ||||||    
T  36329063 cttgctgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttggacaaacgtgacacgattttgacagctga 36329162  T
Q  104 agactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgg 165  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  36329163 agactgctatataagtgttcttgtgcagattttgaaggagagcttgaagagagataaacttgg 36329225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 2 - 205
Target Start/End: Complemental strand, 52083100 - 52082896
Alignment:
Q  2 ggcttgctgggcaag-ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaa-cgtgacacgattttgatag 99  Q
    |||||| |||||||| |||||||||||||||||||  |||||||||||||| ||| ||| |||| ||||||||||||||| ||||||||||||| ||  |    
T  52083100 ggcttgttgggcaagattttcaggataaggttggtcataccttgggtcgtaagcatcaatcgtgacacgatttgggaaaaacgtgacacgatttcgac-g 52083002  T
Q  100 ctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggta 199  Q
    ||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||     
T  52083001 ctgaagactcctatataagtgttctttgcaaattttgaaggacagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtc 52082902  T
Q  200 tttgat 205  Q
    ||||||    
T  52082901 tttgat 52082896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 2 - 205
Target Start/End: Complemental strand, 52094107 - 52093903
Alignment:
Q  2 ggcttgctgggcaag-ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaa-cgtgacacgattttgatag 99  Q
    |||||| |||||||| |||||||||||||||||||  |||||||||||||| ||| ||| |||| ||||||||||||||| ||||||||||||| ||  |    
T  52094107 ggcttgttgggcaagattttcaggataaggttggtcataccttgggtcgtaagcatcaatcgtgacacgatttgggaaaaacgtgacacgatttcgac-g 52094009  T
Q  100 ctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggta 199  Q
    ||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||     
T  52094008 ctgaagactcctatataagtgttctttgcaaattttgaaggacagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtc 52093909  T
Q  200 tttgat 205  Q
    ||||||    
T  52093908 tttgat 52093903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 16 - 195
Target Start/End: Original strand, 5268836 - 5269015
Alignment:
Q  16 gttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatat 115  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||| | ||||||||||||||||||    
T  5268836 gttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttggacaaacgtgacacgattttaacagctgaagactgctatat 5268935  T
Q  116 aagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| |||   ||||||||||||  |||||||||||    
T  5268936 aagtgttcttgtgcagattttgaaggagagcttgaagagagagaaactt-ggattacaaaggaggtaactttagggttgag 5269015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 4 - 165
Target Start/End: Original strand, 8689121 - 8689282
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctga 103  Q
    ||||||||| | |||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||| ||||||    
T  8689121 cttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgccacgattt-ggaaaacgtgacacgattttgacagctga 8689219  T
Q  104 agactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgg 165  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  8689220 agactgctatataagtgttcttgtgcagattttgaaggagagcttgaagtgagagaaacttgg 8689282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 4 - 195
Target Start/End: Complemental strand, 54867652 - 54867461
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctga 103  Q
    ||||||||||| |||||  ||||||||||||| ||||||||| ||||||||||||| |||||||||||||||  ||||||||||||||||||| ||||||    
T  54867652 cttgctgggcacgtttttcggataaggttggtcgtaccttggatcgtacgcaccaatcgtgtcacgatttggacaaacgtgacacgattttgacagctga 54867553  T
Q  104 agactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    ||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||   ||||||||||||  |||||||||||    
T  54867552 agactactatataagtgttcttgtgcagattttggaggagagcttgaagagagagaaactt-ggattacaaaggaggtaactttagggttgag 54867461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 4 - 165
Target Start/End: Original strand, 6743039 - 6743201
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctga 103  Q
    |||| |||||| |||||||||||||||||||| |||||||||| ||||||||| || ||||||||||||||||||||| |||||| ||||||| || |||    
T  6743039 cttgttgggcacgttttcaggataaggttggtcgtaccttgggacgtacgcactaatcgtgtcacgatttgggaaaacttgacacaattttgacagttga 6743138  T
Q  104 agactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgg 165  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  6743139 agactgctatataagtgttcttgtgcagattttgaagtagagcttgaagagagagaaacttgg 6743201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 4 - 165
Target Start/End: Original strand, 25861657 - 25861819
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctga 103  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||  ||||||||||||||||||| || |||    
T  25861657 cttgctgggcatgttttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtgtcacgatttggacaaacgtgacacgattttgacagttga 25861756  T
Q  104 agactgctatataagtg-ttctttgcagattttgaaggagagcttgaagagagagaaacttgg 165  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  25861757 agacttctatataagtgtttctttgcagattttgaaggagagcttttagagagagaaacttgg 25861819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 2 - 197
Target Start/End: Complemental strand, 52095803 - 52095609
Alignment:
Q  2 ggcttgctgggcaag-ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaa-cgtgacacgattttgatag 99  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||| ||| |||| |||||| | |||||| ||||||  ||||| ||  |    
T  52095803 ggcttgctgggcaagattttcaggataaggttggtcgtaccttgggtcgtaagcatcaatcgtgacacgatataggaaaaacgtgac--gatttcgac-g 52095707  T
Q  100 ctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgaggg 197  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  52095706 ctgaagactgctatataagtgttctttgtagattttgaaggacagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg 52095609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 45 - 205
Target Start/End: Complemental strand, 12739949 - 12739789
Alignment:
Q  45 ggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatataagtgttctttgcagattttgaaggagag 144  Q
    ||||||||||||||| ||||| | ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||  |||    
T  12739949 ggtcgtacgcaccaatcgtgttatgattttggaaaacgtgacacgattttgacagctgaagactgctatataagtgttctttacagattttgaagtggag 12739850  T
Q  145 cttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
     ||||||||||||||||||| |||||||||||||||||  |||||||||||||| ||||||    
T  12739849 gttgaagagagagaaacttgagaaatcaaaggaggtaactttagggttgagggtctttgat 12739789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 45 - 205
Target Start/End: Complemental strand, 12748155 - 12747995
Alignment:
Q  45 ggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatataagtgttctttgcagattttgaaggagag 144  Q
    ||||||||||||||| ||||| | ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||  |||    
T  12748155 ggtcgtacgcaccaatcgtgttatgattttggaaaacgtgacacgattttgacagctgaagactgctatataagtgttctttacagattttgaagtggag 12748056  T
Q  145 cttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
     ||||||||||||||||||| |||||||||||||||||  |||||||||||||| ||||||    
T  12748055 gttgaagagagagaaacttgagaaatcaaaggaggtaactttagggttgagggtctttgat 12747995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 17 - 195
Target Start/End: Original strand, 16622931 - 16623108
Alignment:
Q  17 ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatata 116  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| || ||||| ||||||||||    
T  16622931 ttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgattt-ggaaaacgtgacacgattttgacaggtgaaggctgctatata 16623029  T
Q  117 agtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    |||||| || ||||||||||||||||||||| |||||||||||||||| |||   ||||||||||||  |||||||||||    
T  16623030 agtgtttttgtgcagattttgaaggagagctagaagagagagaaactt-ggattacaaaggaggtaactttagggttgag 16623108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 16 - 195
Target Start/End: Complemental strand, 3778009 - 3777831
Alignment:
Q  16 gttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatat 115  Q
    ||||||| |||||||||||| ||||||||||||||||||||||| |||| |||| ||| ||||||| ||||| |||||||| ||||||||||||||||||    
T  3778009 gttttcaagataaggttggtcgtaccttgggtcgtacgcaccaatcgtgccacg-ttttggaaaacttgacatgattttgacagctgaagactgctatat 3777911  T
Q  116 aagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    || ||||||| ||||||||||||||| |||||||||||||||||||||| |||   ||||||||||||  |||||||||||    
T  3777910 aaatgttcttgtgcagattttgaaggtgagcttgaagagagagaaactt-ggattacaaaggaggtaactttagggttgag 3777831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 17 - 195
Target Start/End: Original strand, 16628510 - 16628687
Alignment:
Q  17 ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatata 116  Q
    |||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| || ||||| ||||||||||    
T  16628510 ttttcatgataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgattt-ggaaaacgtgacacgattttgacagatgaaggctgctatata 16628608  T
Q  117 agtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    |||||| || | ||||||||||||||||||| ||||||||||||| || |||   ||||||||||||  |||||||||||    
T  16628609 agtgtttttgttcagattttgaaggagagctagaagagagagaaaatt-ggattgcaaaggaggtaactttagggttgag 16628687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 45 - 205
Target Start/End: Original strand, 48142810 - 48142971
Alignment:
Q  45 ggtcgtacgcaccaaacgtgtcacgatttgggaaaa-cgtgacacgattttgatagctgaagactgctatataagtgttctttgcagattttgaag-gag 142  Q
    ||||||||||| ||| |||| ||||||||||||||| ||||||||||||| ||  ||||||| |||||||||||||||||||||||| |||||||| |||    
T  48142810 ggtcgtacgcatcaatcgtgacacgatttgggaaaaacgtgacacgatttcgac-gctgaagtctgctatataagtgttctttgcagtttttgaagagag 48142908  T
Q  143 agcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||| |||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||    
T  48142909 agctagaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgat 48142971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 37 - 205
Target Start/End: Complemental strand, 30000212 - 30000044
Alignment:
Q  37 gtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaac-gtgacacgattttgatagctgaagactgctatataagtgttctttgcagatttt 135  Q
    ||||||||||||||||||| ||| |||| ||||||| |||||||  |||||||||||| ||  |||||||| ||||||||||||||| ||||||||||||    
T  30000212 gtaccttgggtcgtacgcatcaatcgtggcacgattggggaaaaatgtgacacgatttcgac-gctgaagattgctatataagtgttttttgcagatttt 30000114  T
Q  136 gaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||  |||||||| ||||| ||||||    
T  30000113 gaaggagagcttgaagagagagaaacttgggaaatcaaaggagacaactttagggtttagggtctttgat 30000044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 45 - 205
Target Start/End: Complemental strand, 56179035 - 56178875
Alignment:
Q  45 ggtcgtacgcaccaaacgtgtcacgatttgggaaaac-gtgacacgattttgatagctgaagactgctatataagtgttctttgcagattttgaaggaga 143  Q
    ||||||||||| ||| |||| |||||| ||||||||  |||||||||||| ||  ||||||||||| |||||||||||||||||||||||||||| ||||    
T  56179035 ggtcgtacgcatcaatcgtgacacgatctgggaaaaatgtgacacgatttcgac-gctgaagactgttatataagtgttctttgcagattttgaaagaga 56178937  T
Q  144 gcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||| ||| ||||||    
T  56178936 gcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaaggtctttgat 56178875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 16 - 165
Target Start/End: Complemental strand, 5148138 - 5147989
Alignment:
Q  16 gttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatat 115  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| | ||||||||||||||| ||   || | |||||||||||||    
T  5148138 gttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgattt-gcaaaacgtgacacgatcttatcagtttaagactgctatat 5148040  T
Q  116 aagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgg 165  Q
    |||||||||| |||||||||||||||||||||||||  |||||||||||||    
T  5148039 aagtgttcttgtgcagattttgaaggagagcttgaaatgagagaaacttgg 5147989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 16 - 165
Target Start/End: Complemental strand, 5143721 - 5143571
Alignment:
Q  16 gttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgat-agctgaagactgctata 114  Q
    |||||||||||||||||||| | ||||||||| || |||||||| ||||||||||||| |||||||||||||||||||| ||   |||||||||||||||    
T  5143721 gttttcaggataaggttggtcgcaccttgggttgtgcgcaccaatcgtgtcacgattt-ggaaaacgtgacacgatttttatctactgaagactgctata 5143623  T
Q  115 taagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgg 165  Q
    ||||||||||| ||||||||||||||||||||||||||  ||||||||||||    
T  5143622 taagtgttcttgtgcagattttgaaggagagcttgaagtaagagaaacttgg 5143571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 165
Target Start/End: Original strand, 35661978 - 35662098
Alignment:
Q  45 ggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatataagtgttctttgcagattttgaaggagag 144  Q
    ||||||||||||||| ||||||||||||||| ||||||||| || ||||||| | |||||||||||||||||||||||||||||||||||||| ||||||    
T  35661978 ggtcgtacgcaccaaccgtgtcacgatttggcaaaacgtgatacaattttgacaactgaagactgctatataagtgttctttgcagattttgatggagag 35662077  T
Q  145 cttgaagagagagaaacttgg 165  Q
     ||||||||||| ||||||||    
T  35662078 gttgaagagagaaaaacttgg 35662098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 12745860 - 12745675
Alignment:
Q  1 cggcttgctgggcaagttttc-aggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatag 99  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||| |||||||||                    ||||||| ||    
T  12745860 cggcttgctgggcaagttttccaggataaggttggtcgtaccttgggtcgtacgcgccaatcgtgtcacg--------------------attttgacag 12745781  T
Q  100 ctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggta 199  Q
    ||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||  |||||||||||  |||| |||||||||     
T  12745780 ctgaagactgctatataagtgttctttgcagattttgaagttgaggttgaagagagagaaacttgggaaaaaaaaggaggtaactttagagttgagggtc 12745681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 45 - 205
Target Start/End: Complemental strand, 5370486 - 5370325
Alignment:
Q  45 ggtcgtacgcaccaaacgtgtcacgatttgggaaaa--cgtgacacgattttgatagctgaagactgctatataagtgttctttgcagattttgaaggag 142  Q
    ||||||||||| ||| |||| ||||||| |||||||  ||||||||||||| ||  |||||||||  |||||||||||||||||||||||||||||||||    
T  5370486 ggtcgtacgcatcaatcgtggcacgattggggaaaaaacgtgacacgatttcgac-gctgaagacaactatataagtgttctttgcagattttgaaggag 5370388  T
Q  143 agcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    | |||||||||||||||||||| |||||||||||||  ||  |||||||| ||||| ||||||    
T  5370387 aacttgaagagagagaaacttgagaaatcaaaggagacaactttagggtttagggtctttgat 5370325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 6655467 - 6655557
Alignment:
Q  5 ttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttg 95  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  6655467 ttgctgggcaagttttcaggataaggttggtcgtacattgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgacacgattttg 6655557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 50674505 - 50674413
Alignment:
Q  3 gcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttg 95  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||    
T  50674505 gcttgctgggcacgttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcatgacacaattttg 50674413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 45 - 195
Target Start/End: Complemental strand, 10047808 - 10047663
Alignment:
Q  45 ggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatataagtgttctt-tgcagattttgaaggaga 143  Q
    ||||||||||||||| |||||||||||||||  ||||||||||||||||||| || |||||||     ||||||||||||| ||||||||||||||||||    
T  10047808 ggtcgtacgcaccaatcgtgtcacgatttggacaaacgtgacacgattttgacagttgaagac-----tataagtgttcttgtgcagattttgaaggaga 10047714  T
Q  144 gcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    |||||||||||||||||||| |||   ||||||||||||  |||||||||||    
T  10047713 gcttgaagagagagaaactt-ggattacaaaggaggtaactttagggttgag 10047663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 26363772 - 26363866
Alignment:
Q  1 cggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttg 95  Q
    |||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  26363772 cggcttgctgagcaagttttcaggataaggttggtcataccttgggtcgtacgcaccaaacgtgtcacaatttgggaaatcgtgacacgattttg 26363866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 17 - 195
Target Start/End: Original strand, 38152075 - 38152253
Alignment:
Q  17 ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatata 116  Q
    ||||| ||||||||||||| ||||||||| ||||||||| ||| ||| | ||  ||||  |||| ||||||||||||||| ||||||| |||||||||||    
T  38152075 ttttccggataaggttggtcgtaccttggatcgtacgcatcaatcgttttacattttgaaaaaatgtgacacgattttgacagctgaatactgctatata 38152174  T
Q  117 agtgtt-ctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    |||||| || |||||||||||||  |||||| ||||||||||||| || |||   |||| |||||||  |||||||||||    
T  38152175 agtgttcctgtgcagattttgaa-aagagctggaagagagagaaaatttggattacaaatgaggtaactttagggttgag 38152253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 81 - 165
Target Start/End: Original strand, 5396372 - 5396457
Alignment:
Q  81 cgtgacacgattttgatagctgaagactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgg 165  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||    
T  5396372 cgtgccacgattttgacagctgaagactgctatataagtgttcttgagcagattttgaaggagagctggaagagagagaaacttgg 5396457  T

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Target: chr4; HSP #37
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 27417595 - 27417518
Alignment:
Q  18 tttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttg 95  Q
    |||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||    
T  27417595 tttcaggataaggttggtcgtaccttgggtcgtacgcatcaaccgtgtcacgatttgggaaatcgtgacacgattttg 27417518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 40630493 - 40630585
Alignment:
Q  3 gcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttg 95  Q
    ||||||| ||||  ||||||| ||||||||||| |||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||    
T  40630493 gcttgctaggcacattttcagaataaggttggtcgtaccttgggtcatatgcaccaaacgtgtcacgatttgggaaatcgtgacacgattttg 40630585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 41639075 - 41639166
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttg 95  Q
    |||| |||||| |||||||||||||||||||| ||||||||||||||||||| |||  |||||||||||||||||| | |||||||||||||    
T  41639075 cttgttgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcatcaactgtgtcacgatttgggaaaccatgacacgattttg 41639166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 50263358 - 50263265
Alignment:
Q  1 cggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttg 95  Q
    ||||||| |||| |||||||||| ||||||||||| ||||||||| |||||||||||||| |||||||| ||||||||| |||||||||||||||    
T  50263358 cggcttggtgggtaagttttcagaataaggttggtcgtaccttgg-tcgtacgcaccaaatgtgtcacggtttgggaaatcgtgacacgattttg 50263265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 46570187 - 46570115
Alignment:
Q  1 cggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgattt 73  Q
    ||||||||||||||| ||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||    
T  46570187 cggcttgctgggcaaattttcaggataaggttggtcgtactttgggtcgtacgcatcaaacgtgtcacgattt 46570115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 4 - 165
Target Start/End: Original strand, 31985258 - 31985419
Alignment:
Q  4 cttgctgggcaagttttcaggataaggt-tggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctg 102  Q
    ||||||||  |||||||||||||||||  |||| |||||||| | |||||||| ||| |||| |||||||||| ||| |||| |||||||||   || ||    
T  31985258 cttgctggttaagttttcaggataaggactggtcgtaccttgtgacgtacgcatcaatcgtgacacgatttgg-aaatcgtggcacgattttatcagttg 31985356  T
Q  103 aagactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgg 165  Q
    ||||||  ||| ||||||||||| ||||||||||||||  ||||||||||||||||||||||||    
T  31985357 aagactagtatttaagtgttcttgtgcagattttgaagt-gagcttgaagagagagaaacttgg 31985419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 119 - 182
Target Start/End: Original strand, 36994368 - 36994431
Alignment:
Q  119 tgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaa 182  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  36994368 tgttctttgcagattttgaaggagaggttgaagagagagaaacttggaaaatcaaaggaggtaa 36994431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 205
Target Start/End: Complemental strand, 13992717 - 13992525
Alignment:
Q  14 aagttttcaggataaggt-tggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgcta 112  Q
    ||||||||| |||||||  ||||  ||||||| | |||||| | ||| |||| |||||| ||| ||| ||||||||||||||   ||  |||||||  ||    
T  13992717 aagttttcatgataaggactggtcataccttgtgacgtacgtatcaatcgtgacacgatctgg-aaatcgtgacacgattttatcagtggaagactagta 13992619  T
Q  113 tataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    | ||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||  | ||  |||||||| ||||| ||||||    
T  13992618 tttaagtgttcttgtgcagatttggagggagagcttgaagagagagaaacttgggaaatcaaaggtagcaactttagggtttagggtctttgat 13992525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 205
Target Start/End: Original strand, 24968850 - 24969040
Alignment:
Q  16 gttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatat 115  Q
    |||||||||||||||||||| |||| |||||||||||||  ||| |||| || ||||| |  || ||||||||||| |||| || ||  |  | |||| |    
T  24968850 gttttcaggataaggttggtcgtacattgggtcgtacgcttcaatcgtgacatgattttgccaatcgtgacacgatattgacagttgttgggtactattt 24968949  T
Q  116 aagtgtt-ctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    ||||||| || | ||||||||  | |||| ||| |||||||| |||||||||||||||||||||||||  ||| |||||| ||| ||||||    
T  24968950 aagtgtttctgttcagattttttatgagaacttcaagagagaaaaacttgggaaatcaaaggaggtaactttaaggttgacggtctttgat 24969040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 3909844 - 3909916
Alignment:
Q  24 gataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttga 96  Q
    |||||||||||| |||||||| |||||||||| ||| |||||||||||||  |||||||||||| ||||||||    
T  3909844 gataaggttggtcgtaccttgagtcgtacgcatcaaccgtgtcacgattttagaaaacgtgacatgattttga 3909916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 36994285 - 36994365
Alignment:
Q  1 cggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaac 81  Q
    ||||||||| |||| ||||||  |||||||||| | ||||||| ||||||||||||||| ||||||||||||||| |||||    
T  36994285 cggcttgctaggcacgttttctagataaggttgatcgtaccttaggtcgtacgcaccaaccgtgtcacgatttggcaaaac 36994365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 46147658 - 46147594
Alignment:
Q  141 agagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    ||||||| |||||||| |||||||||||||||||||||||||  |||||||||||||| ||||||    
T  46147658 agagcttcaagagagaaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgat 46147594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 142 - 205
Target Start/End: Complemental strand, 52467657 - 52467594
Alignment:
Q  142 gagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||||| |||||||||||||| ||| |||||||||||||||| |||||||||||||| ||||||    
T  52467657 gagcttcaagagagagaaactagggtaatcaaaggaggtaattttagggttgagggtctttgat 52467594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 144 - 205
Target Start/End: Complemental strand, 45687496 - 45687435
Alignment:
Q  144 gcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||| |||||||||||||| |||||||||||||||||||  |||||||||||||| ||||||    
T  45687496 gcttcaagagagagaaactagggaaatcaaaggaggtaactttagggttgagggtctttgat 45687435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 203
Target Start/End: Original strand, 6375950 - 6376002
Alignment:
Q  151 gagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttg 203  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||| ||||    
T  6375950 gagagagaatcttgggaaatcaaaggaggtaattttagggttgagggtctttg 6376002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 31495639 - 31495578
Alignment:
Q  115 taagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaagg 176  Q
    ||||||||||| ||||||||| ||||||||| | |||||||||||||||||||||||||||||    
T  31495639 taagtgttcttgtgcagattt-gaaggagagttggaagagagagaaacttgggaaatcaaagg 31495578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 54882547 - 54882605
Alignment:
Q  1 cggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaa 59  Q
    ||||||| ||| || |||||||||||||||||| | |||||||||||||||||||||||    
T  54882547 cggcttgttggacacgttttcaggataaggttgatcgtaccttgggtcgtacgcaccaa 54882605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 5396327 - 5396375
Alignment:
Q  16 gttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtg 64  Q
    |||||||||||||||||| | ||||||||||||||||||||||| ||||    
T  5396327 gttttcaggataaggttgatcgtaccttgggtcgtacgcaccaatcgtg 5396375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 36463705 - 36463641
Alignment:
Q  141 agagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    ||||||| |||||||| ||||||||||||||| |||||||||  ||||| |||||||| ||||||    
T  36463705 agagcttcaagagagaaaaacttgggaaatcataggaggtaactttaggattgagggtctttgat 36463641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 37230039 - 37229975
Alignment:
Q  141 agagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    ||||||| |||||||| ||||||| |||||||||||||||||  |||||||| ||||| ||||||    
T  37230039 agagcttcaagagagacaaacttgagaaatcaaaggaggtaactttagggtttagggtctttgat 37229975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 42599305 - 42599361
Alignment:
Q  110 ctatataagtgtt-ctttgcagattttgaaggagagcttgaagagagagaaacttgg 165  Q
    ||||||||||||| |||||||||||||||||||||||||  || |||||||||||||    
T  42599305 ctatataagtgtttctttgcagattttgaaggagagcttttagtgagagaaacttgg 42599361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 87
Target Start/End: Original strand, 2209259 - 2209301
Alignment:
Q  45 ggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgaca 87  Q
    |||||||||||||||||| |||||||||||||||| |||||||    
T  2209259 ggtcgtacgcaccaaacgcgtcacgatttgggaaatcgtgaca 2209301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 5112576 - 5112519
Alignment:
Q  138 aggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    ||||||||||||||||||||||||||| ||   ||||||||||||| ||||| |||||    
T  5112576 aggagagcttgaagagagagaaacttgagattacaaaggaggtaattttaggtttgag 5112519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 39774032 - 39774120
Alignment:
Q  108 tgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    |||||||||||||||  | | |||||||||||| |||| || ||||||||||||||||||    ||||||||||||  |||||||||||    
T  39774032 tgctatataagtgtttatgttcagattttgaagtagagtttaaagagagagaaacttgggtttacaaaggaggtaactttagggttgag 39774120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 26176067 - 26176033
Alignment:
Q  1 cggcttgctgggcaagttttcaggataaggttggt 35  Q
    ||||||| |||||||||||||||||||||||||||    
T  26176067 cggcttgatgggcaagttttcaggataaggttggt 26176033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 195
Target Start/End: Complemental strand, 37755220 - 37755174
Alignment:
Q  149 aagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    ||||||||||||||||| ||||||||||||||||  ||||| |||||    
T  37755220 aagagagagaaacttggaaaatcaaaggaggtaactttaggattgag 37755174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 205
Target Start/End: Original strand, 5871684 - 5871749
Alignment:
Q  140 gagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||| ||| |||||||  |||||||||||||||||||||||||  ||||||||  |||| ||||||    
T  5871684 gagaacttcaagagaggaaaacttgggaaatcaaaggaggtaactttagggttatgggtctttgat 5871749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 13009735 - 13009670
Alignment:
Q  140 gagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||| ||| |||||||  ||||||||||||||||| |||||||  |||||||| ||||| ||||||    
T  13009735 gagaacttcaagagaggaaaacttgggaaatcaaatgaggtaactttagggttaagggtctttgat 13009670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 165
Target Start/End: Complemental strand, 18377697 - 18377664
Alignment:
Q  132 ttttgaaggagagcttgaagagagagaaacttgg 165  Q
    ||||||||||||||||||||||| ||||||||||    
T  18377697 ttttgaaggagagcttgaagagaaagaaacttgg 18377664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 5208140 - 5208084
Alignment:
Q  147 tgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttg 203  Q
    |||||||||||||| |||| ||||||||||||||||   |||||||| |||| ||||    
T  5208140 tgaagagagagaaatttggaaaatcaaaggaggtaactatagggttgcgggtctttg 5208084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 162; Significance: 1e-86; HSPs: 78)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 4 - 205
Target Start/End: Original strand, 29812791 - 29812992
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctga 103  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||    
T  29812791 cttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacgattttgaccgctga 29812890  T
Q  104 agactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttg 203  Q
    |||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||    
T  29812891 agactgctatataagtgttctttgtagattttgaagaagaggttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttg 29812990  T
Q  204 at 205  Q
    ||    
T  29812991 at 29812992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 2 - 205
Target Start/End: Original strand, 29810594 - 29810797
Alignment:
Q  2 ggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagct 101  Q
    |||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  29810594 ggcttgctggacaaattttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgacagct 29810693  T
Q  102 gaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatt 201  Q
    |||||||||||||||||||||||||||| ||||||||| | || ||||||| ||| |||||||||||||||||||||||||| |||||||||||||| ||    
T  29810694 gaagactgctatataagtgttctttgcatattttgaagaaaaggttgaagaaagaaaaacttgggaaatcaaaggaggtaattttagggttgagggtctt 29810793  T
Q  202 tgat 205  Q
    ||||    
T  29810794 tgat 29810797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 17 - 205
Target Start/End: Original strand, 40734239 - 40734427
Alignment:
Q  17 ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatata 116  Q
    ||||||||||||||||||| ||||||||| ||||||||| ||| |||||||||||||||  ||||||||||| ||||||| |||||||||||||||||||    
T  40734239 ttttcaggataaggttggtcgtaccttggatcgtacgcatcaatcgtgtcacgatttggacaaacgtgacacaattttgacagctgaagactgctatata 40734338  T
Q  117 agtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||  |||||||||||||| ||||||    
T  40734339 agtgttctttgcagattttgaaggagagcttgaagagacagaaacttggaaaatcaaaggagataactttagggttgagggtctttgat 40734427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 2 - 205
Target Start/End: Original strand, 7761989 - 7762195
Alignment:
Q  2 ggcttgctgggcaag-ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaa-cgtgacacgattttgatag 99  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||| |||| ||||||| ||||||| ||||||||||||| ||  |    
T  7761989 ggcttgctgggcaagattttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtgacacgattggggaaaaacgtgacacgatttagac-g 7762087  T
Q  100 ctgaagactgctatataagtgttctttgcagattttgaaggagagcttga--agagagagaaacttgggaaatcaaaggaggtaatgttagggttgaggg 197  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||  |||||||||||||||||||||||||||||||||  |||||||||||||    
T  7762088 ctgaagactgctatataagtgttctttgcaaattttgaaggaaagcttgaagagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg 7762187  T
Q  198 tatttgat 205  Q
    | ||||||    
T  7762188 tctttgat 7762195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 5236900 - 5236695
Alignment:
Q  1 cggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagc 100  Q
    |||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |      
T  5236900 cggcttgctgggaaagttttcaggataagtttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttggcaaaacgtgacacgattttgacact 5236801  T
Q  101 tgaagactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggta 199  Q
    || ||  | |||| ||||||||||| ||||||||||||||  | |||||||||||||||||||||||||||| ||||||||||  ||||||||||||||     
T  5236800 tgcagggtactatttaagtgttcttgtgcagattttgaagtggggcttgaagagagagaaacttgggaaatcgaaggaggtaactttagggttgagggtc 5236701  T
Q  200 tttgat 205  Q
    ||||||    
T  5236700 tttgat 5236695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 45 - 205
Target Start/End: Original strand, 51398583 - 51398743
Alignment:
Q  45 ggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatataagtgttctttgcagattttgaaggagag 144  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||    
T  51398583 ggtcgtacgcaccaaacgtgtcacgatttgggaaaatgtgacacgattttgacagctgaagattgctatataagtgttctttgtagattttgaaggagag 51398682  T
Q  145 cttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
     ||||||||| |||||||||||||||||||||||||||  ||||||||||| || ||||||    
T  51398683 gttgaagagatagaaacttgggaaatcaaaggaggtaactttagggttgagagtctttgat 51398743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 17 - 165
Target Start/End: Original strand, 30709423 - 30709572
Alignment:
Q  17 ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatata 116  Q
    ||||||||||||| |||||  |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  30709423 ttttcaggataagattggtcttaccttgggtcgtacgcaccaatcgtgtcacgatttggaaaaacgtgacacgattttgacagctgaagactgctatata 30709522  T
Q  117 agtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgg 165  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  30709523 agtgttcttgtgcagattttgaaggagagcttgaagagacagaaacttgg 30709572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 4 - 195
Target Start/End: Complemental strand, 36029566 - 36029375
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctga 103  Q
    ||||||||| | |||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||| | |||||||||||| ||||||| ||||||    
T  36029566 cttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacggtttagaaaaacgtgacacaattttgacagctga 36029467  T
Q  104 agactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||| |||   ||||||||||||  |||||||||||    
T  36029466 agactgctatataagtgttcttgtgcagattttgaaggagagcttgaagtaagagaaactt-ggattacaaaggaggtaaatttagggttgag 36029375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 4 - 195
Target Start/End: Original strand, 40592395 - 40592586
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctga 103  Q
    |||||||| || |||||||||||||||||||| ||||||||| |||||| |||||| |||||||||||||||  ||||||||||||||||||| ||||||    
T  40592395 cttgctggacacgttttcaggataaggttggtcgtaccttggatcgtacacaccaatcgtgtcacgatttggacaaacgtgacacgattttgacagctga 40592494  T
Q  104 agactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    |||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||   ||||||||||||  |||||||||||    
T  40592495 agaccgctatataagtgttcttgtgcagattttgaatgagagcttgaagagagagaaactt-ggattacaaaggaggtaactttagggttgag 40592586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 2 - 205
Target Start/End: Original strand, 45094889 - 45095094
Alignment:
Q  2 ggcttgctgggcaag-ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaa-cgtgacacgattttgatag 99  Q
    |||||| |||||||| ||||||||||||||||||| |||||||||  |||||||| ||| |||| ||||||| ||||||| ||||||||||||| ||  |    
T  45094889 ggcttgttgggcaagattttcaggataaggttggtcgtaccttggaacgtacgcatcaatcgtgacacgattggggaaaaacgtgacacgatttcgaacg 45094988  T
Q  100 ctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggta 199  Q
    ||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||| ||  |||||||| |||||     
T  45094989 ctgaagattgctatataagtgttctttgcagattttgaagatgagcttgaagagagagaaacttgggaaatcaaaagaggcaactttagggtttagggtc 45095088  T
Q  200 tttgat 205  Q
    ||||||    
T  45095089 tttgat 45095094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 4 - 195
Target Start/End: Original strand, 24694779 - 24694970
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctga 103  Q
    |||||||| || |||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||  |||||| |||||||||||| | ||||    
T  24694779 cttgctggacacgttttcaggataaggttggtcgtaccttgggttgtacgcaccaatcgtgtcacgatttggacaaacgtaacacgattttgacaactga 24694878  T
Q  104 agactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| || |||   ||||||||||||  |||||||||||    
T  24694879 agactgctatataagtgttcttgtgcagattttgaagaagagcttgaagagagagaaa-tttggattacaaaggaggtaactttagggttgag 24694970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 16 - 195
Target Start/End: Complemental strand, 48438676 - 48438497
Alignment:
Q  16 gttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatat 115  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||  ||||||||||||||||| | ||| ||||||||||||||    
T  48438676 gttttcaggataaggttggttgtaccttggatcgtacgcaccaatcgtgtcacgatttggacaaacgtgacacgattttaacagccgaagactgctatat 48438577  T
Q  116 aagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    |||||||||| |||| |||||||||||||||||||| |||||||||||| |||   ||||||||||||  |||||||||||    
T  48438576 aagtgttcttgtgcaaattttgaaggagagcttgaatagagagaaactt-ggattacaaaggaggtaactttagggttgag 48438497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 17 - 195
Target Start/End: Original strand, 1735930 - 1736108
Alignment:
Q  17 ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatata 116  Q
    |||| |||||||||||||| ||||||||||| ||||||||||| |||||||||||||||  ||||||||||||||||||| |||||||||||||||||||    
T  1735930 tttttaggataaggttggtcgtaccttgggttgtacgcaccaatcgtgtcacgatttggacaaacgtgacacgattttgacagctgaagactgctatata 1736029  T
Q  117 agtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    ||||||||| ||||||||||||||||||| ||| |||||||||||||| |||   ||||||||||||  |||||||||||    
T  1736030 agtgttcttatgcagattttgaaggagagtttggagagagagaaactt-ggattacaaaggaggtaactttagggttgag 1736108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 5 - 195
Target Start/End: Original strand, 8370104 - 8370293
Alignment:
Q  5 ttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaa 104  Q
    |||||||| | ||||| |||||||||||||| ||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||| | |||||    
T  8370104 ttgctgggaacgtttttaggataaggttggtcgtaccttgggttgtacgcaccaatcgtgtcacgattt-ggaaaacgtgacacgattttgacaactgaa 8370202  T
Q  105 gactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    |||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||| |||   ||||||||||||  |||||||||||    
T  8370203 gactgctatataagcgttcttgtgcagattttgaagaagagcttgaagagagagaaactt-ggattacaaaggaggtaactttagggttgag 8370293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 2 - 205
Target Start/End: Complemental strand, 5260766 - 5260562
Alignment:
Q  2 ggcttgctgggcaag-ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaa-cgtgacacgattttgatag 99  Q
    |||||| |||||||| ||||||||||||||||||| |||| |||| ||||||||| |||  ||| ||||||| ||||||| | ||||||||||||||  |    
T  5260766 ggcttgttgggcaagattttcaggataaggttggtcgtactttggatcgtacgcatcaattgtggcacgattggggaaaaacatgacacgattttgac-g 5260668  T
Q  100 ctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggta 199  Q
    | |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||  |||||||| |||||     
T  5260667 cagaagacagctatataagtgttctttgcagattttgaaggtgagcttgaagagagagaaacttgggaaatcaaaggaggcaactttagggtttagggtc 5260568  T
Q  200 tttgat 205  Q
    ||||||    
T  5260567 tttgat 5260562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 17 - 165
Target Start/End: Original strand, 47923530 - 47923679
Alignment:
Q  17 ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatata 116  Q
    ||||||||||||||||||| ||||||||||| ||||||| ||| |||||||||||||||  ||||||||||||||||||| | ||||||| |||||||||    
T  47923530 ttttcaggataaggttggtcgtaccttgggttgtacgcatcaatcgtgtcacgatttggacaaacgtgacacgattttgacaactgaagagtgctatata 47923629  T
Q  117 agtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgg 165  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  47923630 agtgttcttgtgcagattttgaaggagagcttgaagagagagaaacttgg 47923679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 7 - 195
Target Start/End: Complemental strand, 16264818 - 16264631
Alignment:
Q  7 gctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaaga 106  Q
    |||||| | |||||||||||||||||||| ||||||||||| ||||||||||| |||| |||||||| ||||| |||||||||||||||| |||||||||    
T  16264818 gctgggtacgttttcaggataaggttggtcgtaccttgggtggtacgcaccaatcgtgccacgattt-ggaaagcgtgacacgattttgacagctgaaga 16264720  T
Q  107 ctgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||  |||||||||| |||   ||||||||||||  |||||||||||    
T  16264719 ctgctatataagtgttcttgtgcagtttttgaaggagagcttgaagtaagagaaactt-ggattacaaaggaggtaactttagggttgag 16264631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 4 - 195
Target Start/End: Original strand, 39032169 - 39032359
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctga 103  Q
    ||||||||| | ||||||||||||| |||||| ||||||||||||||||||||||| |||| |||||||| | ||| |||||||||||||||| ||||||    
T  39032169 cttgctgggtacgttttcaggataaagttggtcgtaccttgggtcgtacgcaccaatcgtgccacgattt-gaaaatcgtgacacgattttgacagctga 39032267  T
Q  104 agactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    ||| |||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||| |||   ||||||||||||  |||||||||||    
T  39032268 agattgctatataagtgttcttgtgcagtttttgaagtagagcttgaagagagagaaactt-ggattacaaaggaggtaactttagggttgag 39032359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 17 - 195
Target Start/End: Complemental strand, 27027165 - 27026988
Alignment:
Q  17 ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatata 116  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||| |||| ||| |||||||||||||||||||||| |||||||||||||||||||    
T  27027165 ttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgccacg-ttttggaaaacgtgacacgattttgacagctgaagactgctatata 27027067  T
Q  117 agtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    |||  |||| |||||||||||||| |||||||||||||||| |||||| |||   ||||||||||||  |||||||||||    
T  27027066 agtaatcttgtgcagattttgaagaagagcttgaagagagaaaaactt-ggattacaaaggaggtaactttagggttgag 27026988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 2 - 194
Target Start/End: Original strand, 44331295 - 44331473
Alignment:
Q  2 ggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagct 101  Q
    ||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||| |||||            |||||||| |||||||| ||||    
T  44331295 ggcttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacttgtca------------acgtgacatgattttgacagct 44331382  T
Q  102 gaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttga 194  Q
    |||||||||||||||| ||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||    
T  44331383 gaagactgctatataaatgttctttgtaga-tttgaaggagagcttg-agagagagaaacttgggaaatcaaaggaggtaactttagggttga 44331473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 165
Target Start/End: Complemental strand, 8127091 - 8126941
Alignment:
Q  16 gttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatat 115  Q
    |||||||||||||||||||| ||| |||||||||||| |||||| |||||||||||||||  ||||||||||||||||||| || |||||||||||||||    
T  8127091 gttttcaggataaggttggtcgtatcttgggtcgtacacaccaaccgtgtcacgatttggacaaacgtgacacgattttgacagttgaagactgctatat 8126992  T
Q  116 aagtg-ttctttgcagattttgaaggagagcttgaagagagagaaacttgg 165  Q
    ||||| || ||||||||||||||||||||| ||  ||||||||||||||||    
T  8126991 aagtgtttatttgcagattttgaaggagagtttttagagagagaaacttgg 8126941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 2 - 205
Target Start/End: Complemental strand, 5258587 - 5258383
Alignment:
Q  2 ggcttgctgggcaag-ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaa-cgtgacacgattttgatag 99  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||  ||||||||| | |  ||| ||||||| ||||||| ||||||||||||||||  |    
T  5258587 ggcttgctgggcaagattttcaggataaggttggtcgtaccttgaatcgtacgcatcgattgtggcacgattggggaaaaacgtgacacgattttgac-g 5258489  T
Q  100 ctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggta 199  Q
    | |||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||  | ||  |||||||| |||||     
T  5258488 cagaagacagctatatacgtgttctttgcagattttgaaggagagctagaagagagagaaacttgagaaatcaaagggagaaactttagggtttagggtc 5258389  T
Q  200 tttgat 205  Q
    ||||||    
T  5258388 tttgat 5258383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 14 - 205
Target Start/End: Original strand, 37408197 - 37408388
Alignment:
Q  14 aagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctat 113  Q
    |||||||||||||||||||||| ||||||||||||||||| | ||| |||| |||||||||| ||| ||| ||| ||||||    ||||||||||| |||    
T  37408197 aagttttcaggataaggttggtcgtaccttgggtcgtacgtatcaatcgtggcacgatttgg-aaatcgtaacaagattttatctgctgaagactggtat 37408295  T
Q  114 ataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||||||||||| || |||||||||||| |||||||||||||||||||||||||||||||||||||| ||  |||||||| | ||| ||||||    
T  37408296 ataagtgttcttgtgaagattttgaaggtgagcttgaagagagagaaacttgggaaatcaaaggaggcaactttagggtttatggtctttgat 37408388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 17 - 205
Target Start/End: Complemental strand, 9636555 - 9636366
Alignment:
Q  17 ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttggg-aaaacgtgacacgattttgatagctgaagactgctatat 115  Q
    ||||||||||||||||||| ||||||||| ||||||||| ||| |||| ||||||| ||| ||||||||||||||||||||  || |||| | |||||||    
T  9636555 ttttcaggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgattggggaaaaacgtgacacgattttga-cgcagaaggcagctatat 9636457  T
Q  116 aagtgttctttgcagattttgaag-gagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||||||||||||||||||||||| | ||| | |||||||||||||||||||||||||||||| | ||  |||||||| ||||| ||||||    
T  9636456 aagtgttctttgcagattttgaagagtgagttggaagagagagaaacttgggaaatcaaaggaagaaactttagggtttagggtctttgat 9636366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 2 - 156
Target Start/End: Complemental strand, 44331889 - 44331735
Alignment:
Q  2 ggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagct 101  Q
    ||||| ||||| | ||||||| ||||| ||| || |||||||||||||||| ||||||| ||||||||||||||| ||||||| || |||||||| ||||    
T  44331889 ggcttcctgggtacgttttcaagataaagttagtcgtaccttgggtcgtacacaccaaatgtgtcacgatttggggaaacgtggcatgattttgacagct 44331790  T
Q  102 gaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagaga 156  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||    
T  44331789 gaagactgctatatatgtgttatttgcagattttgaaggagagcttaaagagaga 44331735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 2 - 205
Target Start/End: Original strand, 7764177 - 7764397
Alignment:
Q  2 ggcttgctgggcaag-ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaa-cgtgacacgattttgatag 99  Q
    |||||| |||||||| |||| |||||||||||||| ||||||||||||||||||| ||| |||| || |||| ||||||| ||||||||||||| ||| |    
T  7764177 ggcttgttgggcaagatttttaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtgacatgattggggaaaaacgtgacacgatttagat-g 7764275  T
Q  100 ctgaagactgctatataagtgttctttgcagattttgaaggagagc----------------ttgaagagagagaaacttgggaaatcaaaggaggtaat 183  Q
    |||||||||||||||||||||||||||||| |||||||||||||||                |||||||||||||||||||||||||||||||||||||     
T  7764276 ctgaagactgctatataagtgttctttgcaaattttgaaggagagcattgtaaacattagagttgaagagagagaaacttgggaaatcaaaggaggtaac 7764375  T
Q  184 gttagggttgagggtatttgat 205  Q
     |||| ||||||||| ||||||    
T  7764376 tttagagttgagggtctttgat 7764397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 4 - 195
Target Start/End: Original strand, 27974566 - 27974756
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctga 103  Q
    ||||||||  || |||||| |||||||||||||||||||||||||||||| | ||| |||| || ||||||| |||  ||| |||||||||   ||||||    
T  27974566 cttgctggttaaattttcatgataaggttggttgtaccttgggtcgtacgtatcaatcgtgacatgatttgg-aaattgtggcacgattttatcagctga 27974664  T
Q  104 agactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||   ||||||||||||  |||||||||||    
T  27974665 agactgttatataagtgttcttgtgcagattttgaaggagagcttgaagagagagaaactt-ggattacaaaggaggtaactttagggttgag 27974756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 55302626 - 55302532
Alignment:
Q  1 cggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttg 95  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  55302626 cggcttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgacacaattttg 55302532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 40845113 - 40844968
Alignment:
Q  17 ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatata 116  Q
    |||| |||||||||||||| ||||||||||| ||||||||||| |||||||||||||||  ||||||||||| |||| ||||||||||||||||  ||||    
T  40845113 tttttaggataaggttggtcgtaccttgggttgtacgcaccaatcgtgtcacgatttggacaaacgtgacacaatttagatagctgaagactgc--tata 40845016  T
Q  117 agtgttctt-tgcagattttgaaggagagcttgaagagagagaaactt 163  Q
    ||||||||| |||| |||||||||||||| || |||| ||||||||||    
T  40845015 agtgttcttgtgcaaattttgaaggagagttttaagatagagaaactt 40844968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 165
Target Start/End: Complemental strand, 27038502 - 27038362
Alignment:
Q  16 gttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatat 115  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||| |||          |||||||||||||||||| ||||||||||||||||||    
T  27038502 gttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgccac----------aacgtgacacgattttgacagctgaagactgctatat 27038413  T
Q  116 aagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgg 165  Q
    |||||||||| || ||||||||||| |||||||||||||||| ||||||||    
T  27038412 aagtgttcttgtgtagattttgaagaagagcttgaagagagaaaaacttgg 27038362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 43402451 - 43402357
Alignment:
Q  1 cggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttg 95  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||| |||||||    
T  43402451 cggcttgctgggcaagttttcaggataaggttggttgtatcttgggtcgtacgcaccaaacgtgtcacgatttgggaaattgtgacatgattttg 43402357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 167
Target Start/End: Complemental strand, 23410758 - 23410607
Alignment:
Q  16 gttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatat 115  Q
    ||||||| |||||| ||||| ||||||||||| || | |||||| ||||||||||||||| |||||||||||| | ||||| ||||||||||||||||||    
T  23410758 gttttcaagataagtttggtcgtaccttgggttgttcacaccaaccgtgtcacgatttggcaaaacgtgacac-aatttgacagctgaagactgctatat 23410660  T
Q  116 aagtg-ttctttgcag-attttgaaggagagcttgaagagagagaaacttggga 167  Q
    ||||| ||||||||||  |||||||||||||| |||||||||||||||||||||    
T  23410659 aagtgtttctttgcagttttttgaaggagagc-tgaagagagagaaacttggga 23410607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 43404394 - 43404301
Alignment:
Q  1 cggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgatttt 94  Q
    |||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  43404394 cggcttgctgagcaagttttcaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgacacgatttt 43404301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 14 - 165
Target Start/End: Complemental strand, 37726137 - 37725986
Alignment:
Q  14 aagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctat 113  Q
    |||||||||||||||||||||| |||| |||||||||||| | ||| |||| |||||||| |||||||||| |||||||||   ||||| | ||||||||    
T  37726137 aagttttcaggataaggttggtcgtacattgggtcgtacgtatcaatcgtgacacgattt-ggaaaacgtggcacgattttatcagctgcaaactgctat 37726039  T
Q  114 ataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgg 165  Q
    |||||||||||| ||||||||||| | | ||||||||||||||||||||||||    
T  37726038 ataagtgttcttgtgcagattttggaagtgagcttgaagagagagaaacttgg 37725986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 4569458 - 4569552
Alignment:
Q  1 cggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttg 95  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||  |||||||||||||||||||||    
T  4569458 cggcttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaccgtgtcacggttgtggaaaacgtgacacgattttg 4569552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 163
Target Start/End: Original strand, 25929023 - 25929169
Alignment:
Q  18 tttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatataa 117  Q
    |||||||||||||||||| |||| |||| ||||||| ||||| ||||| |||||||||  || |||||||||||||||| ||||||||| | ||||||||    
T  25929023 tttcaggataaggttggtcgtacattggatcgtacgtaccaaccgtgttacgatttggccaatcgtgacacgattttgacagctgaagatttctatataa 25929122  T
Q  118 gtg-ttctttgcagattttgaaggagagcttgaagagagagaaactt 163  Q
    ||| ||||||| ||||||||||| |||| |||||| |||||||||||    
T  25929123 gtgtttctttgtagattttgaagtagagtttgaagtgagagaaactt 25929169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 165
Target Start/End: Original strand, 33386289 - 33386450
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctga 103  Q
    ||||||||  |||||||||||||||||||||| ||| ||||||||||||| | ||| |||| |||||||| |||||  ||| |||||||||   ||||||    
T  33386289 cttgctggttaagttttcaggataaggttggtcgtatcttgggtcgtacgtatcaatcgtgacacgattt-ggaaattgtggcacgattttatcagctga 33386387  T
Q  104 agactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgg 165  Q
    |||||| ||| ||||||||||| ||||||||||| || |||||||||||||||||||||||||    
T  33386388 agactggtatttaagtgttcttgtgcagattttggagtagagcttgaagagagagaaacttgg 33386450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 54593214 - 54593305
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttg 95  Q
    ||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  54593214 cttgctgggcacgttttcaggataaggttggtcgtacattgggtcgtacgcaccaaacgtgtcacgatttgggaaatcatgacacgattttg 54593305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 31340703 - 31340608
Alignment:
Q  1 cggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacga-tttgggaaaacgtgacacgattttg 95  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||| ||||||| |||||||    
T  31340703 cggcttgttgggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgacacgattttgggaaatcgtgacatgattttg 31340608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 16 - 165
Target Start/End: Complemental strand, 35925951 - 35925791
Alignment:
Q  16 gttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgg----------gaaaacgtgacacgattttgatagctgaag 105  Q
    |||||||||||||||||||| |||| ||| |  ||||||||||| |||| |||| |||||          ||||||||||||||||||||| ||||||||    
T  35925951 gttttcaggataaggttggtcgtacattgagatgtacgcaccaatcgtgccacgttttggccacgttttggaaaacgtgacacgattttgacagctgaag 35925852  T
Q  106 actgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgg 165  Q
    |||||||||||||||||||| ||||| ||||||||| |||||| ||| |||||||||||||    
T  35925851 actgctatataagtgttcttgtgcagtttttgaaggtgagcttaaagtgagagaaacttgg 35925791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 34490747 - 34490811
Alignment:
Q  9 tgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgattt 73  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34490747 tgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgattt 34490811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 6096245 - 6096167
Alignment:
Q  17 ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttg 95  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| | |||||||||||||    
T  6096245 ttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaatgtgtcacgatttgggaaatcatgacacgattttg 6096167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 40912844 - 40912938
Alignment:
Q  1 cggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttg 95  Q
    ||||||| ||||||||||||| |||||||| |||| ||| ||||| ||||||||||||||||||||||||||||||||| | |||||||||||||    
T  40912844 cggcttgttgggcaagttttctggataaggctggtcgtatcttggatcgtacgcaccaaacgtgtcacgatttgggaaatcatgacacgattttg 40912938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 40735170 - 40735259
Alignment:
Q  17 ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaaga 106  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||| | |||||||  ||||||||||||||||||| |||||||||    
T  40735170 ttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgttatgatttggacaaacgtgacacgattttgacagctgaaga 40735259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 49200112 - 49200040
Alignment:
Q  1 cggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgattt 73  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  49200112 cggcttgctgggcatgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaatgtgtcacgattt 49200040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 165
Target Start/End: Complemental strand, 27453429 - 27453269
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctga 103  Q
    ||||||||  |||||||||||||||||||||| |||||||| | |||||| | ||| |||| |||||||| ||||| |||| |||||||||   || |||    
T  27453429 cttgctggttaagttttcaggataaggttggtcgtaccttgtgacgtacgtatcaatcgtgacacgattt-ggaaatcgtggcacgattttatcagttga 27453331  T
Q  104 agactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgg 165  Q
    |||||  | | ||||||||||| ||||| ||||||| ||||||||||||||||||||||||||    
T  27453330 agactagtttttaagtgttcttgtgcagtttttgaa-gagagcttgaagagagagaaacttgg 27453269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 46173240 - 46173318
Alignment:
Q  1 cggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaa 79  Q
    ||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||    
T  46173240 cggcttgttgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaccgtgtcacgaattgggaaa 46173318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 14 - 176
Target Start/End: Complemental strand, 23198368 - 23198206
Alignment:
Q  14 aagttttcaggataaggt-tggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgcta 112  Q
    |||||| ||||||||||  |||| |||||||| | |||||| ||||| |||| |||||||||| ||| ||||||||||||||   ||  |||||||  ||    
T  23198368 aagtttccaggataaggactggtcgtaccttgtgacgtacgtaccaatcgtgacacgatttgg-aaatcgtgacacgattttatcagtggaagactagta 23198270  T
Q  113 tataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaagg 176  Q
    | ||||||||||| |||||||||||||| |||| | |||||||||||||||||| ||||||||||    
T  23198269 tttaagtgttcttgtgcagattttgaag-agagttggaagagagagaaacttggaaaatcaaagg 23198206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 14 - 176
Target Start/End: Complemental strand, 23200567 - 23200405
Alignment:
Q  14 aagttttcaggataaggt-tggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgcta 112  Q
    |||||| ||||||||||  |||| |||||||| | | |||| ||||| |||| |||||||||| ||| ||||||||||||||   ||  |||||||| ||    
T  23200567 aagtttccaggataaggactggtcgtaccttgtgacttacgtaccaatcgtgacacgatttgg-aaatcgtgacacgattttatcagtggaagactggta 23200469  T
Q  113 tataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaagg 176  Q
    | |||||||| || |||||||||||||| |||| | |||||||||||||||||||||||||||||    
T  23200468 tttaagtgtttttgtgcagattttgaag-agagttggaagagagagaaacttgggaaatcaaagg 23200405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 54 - 167
Target Start/End: Complemental strand, 23392300 - 23392187
Alignment:
Q  54 caccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatataagtg-ttctttgcag-attttgaaggagagcttgaag 151  Q
    |||||| ||||||||||||||| |||||||||||| ||||| | | ||||| |||| |||||||||| ||||||||||  |||||||||||||| |||||    
T  23392300 caccaaccgtgtcacgatttggcaaaacgtgacacaattttaacatctgaa-actgttatataagtgtttctttgcagttttttgaaggagagc-tgaag 23392203  T
Q  152 agagagaaacttggga 167  Q
    ||||||||||||||||    
T  23392202 agagagaaacttggga 23392187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 81 - 195
Target Start/End: Complemental strand, 21711617 - 21711504
Alignment:
Q  81 cgtgacacgattttgatagctgaagactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggagg 179  Q
    |||| |||||||| || || || |||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||| |||   |||||||||    
T  21711617 cgtgtcacgatttggacagttgcagactgctatgtaagtgttcttgtgcagattttgaag-agagcttgaagagagagaaactt-ggattacaaaggagg 21711520  T
Q  180 taatgttagggttgag 195  Q
    |||  |||||||||||    
T  21711519 taactttagggttgag 21711504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 21711662 - 21711603
Alignment:
Q  16 gttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgg 75  Q
    |||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  21711662 gttttccggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttgg 21711603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 147 - 205
Target Start/End: Original strand, 40735254 - 40735312
Alignment:
Q  147 tgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||    
T  40735254 tgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgat 40735312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 32744730 - 32744665
Alignment:
Q  140 gagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||||||| |||||||| |||||||||||||||||||||||||  |||||||||||||| ||||||    
T  32744730 gagagcttcaagagagaaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgat 32744665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 95
Target Start/End: Original strand, 36018401 - 36018451
Alignment:
Q  45 ggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttg 95  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  36018401 ggtcgtacgcaccaaccatgtcacgatttgggaaaacgtgacacgattttg 36018451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 29196705 - 29196640
Alignment:
Q  140 gagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||||||  |||||||| |||||||||||||||||||||||||  |||||||||||||| ||||||    
T  29196705 gagagctacaagagagaaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgat 29196640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 37 - 165
Target Start/End: Complemental strand, 32143761 - 32143634
Alignment:
Q  37 gtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatataagtgttctt-tgcagatttt 135  Q
    |||||||| | |||||| | ||| |||| |||||||||| ||| ||||||||||||||   || ||||||||  ||| ||||||||||| ||||||||||    
T  32143761 gtaccttgtgacgtacgtatcaatcgtgacacgatttgg-aaatcgtgacacgattttatcagttgaagacttgtatttaagtgttcttgtgcagatttt 32143663  T
Q  136 gaaggagagcttgaagagagagaaacttgg 165  Q
    | ||||||| ||||||||||||||| ||||    
T  32143662 ggaggagag-ttgaagagagagaaatttgg 32143634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 53921807 - 53921742
Alignment:
Q  140 gagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    ||||||||||||||||| ||||||||||||||||| |||||||  ||||||||||| || ||||||    
T  53921807 gagagcttgaagagagaaaaacttgggaaatcaaatgaggtaactttagggttgagagtctttgat 53921742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 44700795 - 44700731
Alignment:
Q  141 agagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    ||||||| |||||||||||||| |||||||||||||||||||  |||||||||| ||| ||||||    
T  44700795 agagcttcaagagagagaaactagggaaatcaaaggaggtaactttagggttgatggtctttgat 44700731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 195
Target Start/End: Original strand, 6794434 - 6794519
Alignment:
Q  110 ctatataagtgtt-ctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    ||||||||||||| |||||||||||||||||||||| ||  |||||||||||||| |||   ||||||||||||  |||||||||||    
T  6794434 ctatataagtgtttctttgcagattttgaaggagaggttttagagagagaaactt-ggattacaaaggaggtaactttagggttgag 6794519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 27986090 - 27986159
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgattt 73  Q
    ||||||||  |||||||||||||||||||||| ||| ||||||||||||| | ||| |||| ||||||||    
T  27986090 cttgctggttaagttttcaggataaggttggtcgtatcttgggtcgtacgtatcaatcgtgacacgattt 27986159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 194
Target Start/End: Complemental strand, 51352423 - 51352378
Alignment:
Q  149 aagagagagaaacttgggaaatcaaaggaggtaatgttagggttga 194  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||    
T  51352423 aagagagagaaacttcggaaatcaaaggaggtaattttagggttga 51352378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 9666771 - 9666707
Alignment:
Q  141 agagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    ||||||| |||||||||| ||| ||||||||||| |||||||  |||||||||||||| ||||||    
T  9666771 agagcttcaagagagagacactagggaaatcaaatgaggtaactttagggttgagggtctttgat 9666707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 205
Target Start/End: Complemental strand, 39153656 - 39153600
Alignment:
Q  149 aagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||||||  |||||||||||||||||||||||||  |||||||||||||| ||||||    
T  39153656 aagagaggaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgat 39153600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 40519501 - 40519446
Alignment:
Q  141 agagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagg 196  Q
    ||||||| |||||||||||||||| ||||||||| ||| |||| ||||||||||||    
T  40519501 agagcttcaagagagagaaacttgagaaatcaaatgagataattttagggttgagg 40519446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 7782470 - 7782409
Alignment:
Q  115 taagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaagg 176  Q
    ||||||||||| ||||||||| |||||| || | |||||||||||||||||||||||||||||    
T  7782470 taagtgttcttgtgcagattt-gaaggacagttggaagagagagaaacttgggaaatcaaagg 7782409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 22835306 - 22835241
Alignment:
Q  140 gagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||| ||| |||||||  |||||||| ||||||||||||||||  |||||||||||||| ||||||    
T  22835306 gagaacttcaagagaggaaaacttggaaaatcaaaggaggtaactttagggttgagggtctttgat 22835241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 26386785 - 26386720
Alignment:
Q  140 gagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||| ||| |||||||  |||||||||||||||||||||||||  ||||||||||| || ||||||    
T  26386785 gagaacttaaagagaggaaaacttgggaaatcaaaggaggtaactttagggttgagagtctttgat 26386720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 165
Target Start/End: Original strand, 26928290 - 26928374
Alignment:
Q  81 cgtgacacgattttgatagctgaagactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgg 165  Q
    ||||||||||||||   || ||||||||  ||| ||||||||||| ||||||||||| ||||||| ||||||||||| ||||||||    
T  26928290 cgtgacacgattttatcagttgaagacttgtatttaagtgttcttgtgcagattttggaggagag-ttgaagagagaaaaacttgg 26928374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 53921917 - 53921855
Alignment:
Q  13 caagttttcaggataaggttggttgtaccttgggtcgta--cgcaccaaacgtgtcacgattt 73  Q
    ||||||||||||||||||||||| |||||||| ||||||  |||| ||| |||| ||||||||    
T  53921917 caagttttcaggataaggttggtcgtaccttgagtcgtatgcgcatcaatcgtgacacgattt 53921855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 30235688 - 30235726
Alignment:
Q  58 aaacgtgtcacgatttgggaaaacgtgacacgattttga 96  Q
    ||||||| |||||||| ||||||||||||||||||||||    
T  30235688 aaacgtgacacgattttggaaaacgtgacacgattttga 30235726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 205
Target Start/End: Original strand, 760711 - 760776
Alignment:
Q  140 gagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||| ||| |||||||  ||||||||||||||||||||| |||  |||||||| ||||| ||||||    
T  760711 gagaacttcaagagaggaaaacttgggaaatcaaaggagttaactttagggttaagggtctttgat 760776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 205
Target Start/End: Complemental strand, 2075369 - 2075309
Alignment:
Q  144 gcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||| |||||||||||||||||||||||||| || ||||  ||||||||||| || ||||||    
T  2075369 gcttcaagagagagaaacttgggaaatcaaatga-gtaactttagggttgagagtctttgat 2075309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 198
Target Start/End: Complemental strand, 8166754 - 8166705
Alignment:
Q  149 aagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggt 198  Q
    |||||||||||| ||||||||| ||| |||||||  ||||||||||||||    
T  8166754 aagagagagaaatttgggaaataaaatgaggtaactttagggttgagggt 8166705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 205
Target Start/End: Original strand, 9581147 - 9581212
Alignment:
Q  140 gagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||| ||| |||||||  ||||||||||||||||||||| |||  |||||||| ||||| ||||||    
T  9581147 gagaacttcaagagaggaaaacttgggaaatcaaaggagttaactttagggttaagggtctttgat 9581212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 19684193 - 19684128
Alignment:
Q  140 gagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||| ||| |||||||  ||||||||||||||||||||| |||  |||||||| ||||| ||||||    
T  19684193 gagaacttcaagagaggaaaacttgggaaatcaaaggagttaactttagggttaagggtctttgat 19684128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 165
Target Start/End: Original strand, 27986147 - 27986231
Alignment:
Q  81 cgtgacacgattttgatagctgaagactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgg 165  Q
    |||||||||||||||   || |||||| | ||| ||||||||||| ||||||||| |||| |||| | ||||||||||||||||||    
T  27986147 cgtgacacgattttgtccgcagaagacaggtatttaagtgttcttgtgcagatttggaag-agagttggaagagagagaaacttgg 27986231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 32890968 - 32891032
Alignment:
Q  141 agagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    ||||||| |||||||  ||| |||| || |||||||||||||  |||||||||||||| ||||||    
T  32890968 agagcttcaagagaggaaaatttggaaagtcaaaggaggtaactttagggttgagggtctttgat 32891032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 161; Significance: 5e-86; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 15212511 - 15212715
Alignment:
Q  1 cggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagc 100  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||| |||    
T  15212511 cggcttgctgagcaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttaggaaaatgtgacacgattgtgacagc 15212610  T
Q  101 tgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtat 200  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||| |    
T  15212611 tgaagactgctatataagtgttctttacagattttgaaggagagcttgaagagagagaaacttgggaaatcaaatgaggtaactttagggttgagggtct 15212710  T
Q  201 ttgat 205  Q
    |||||    
T  15212711 ttgat 15212715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 4 - 205
Target Start/End: Original strand, 43036151 - 43036352
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctga 103  Q
    |||| ||||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  43036151 cttgttgggcaagttttcaggataaggttgatcgtaccttggatcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgacagctga 43036250  T
Q  104 agactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttg 203  Q
    |||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||    
T  43036251 agactgttatataagtgttctttgcagattttgaatgagaggttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttg 43036350  T
Q  204 at 205  Q
    ||    
T  43036351 at 43036352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 30143067 - 30143271
Alignment:
Q  1 cggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagc 100  Q
    ||||||||||| |||||||| |||||||||||||| |||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||| | |    
T  30143067 cggcttgctggacaagttttaaggataaggttggtcgtactttgggtcgtacgcaccaaccgtgtcacgatttggcaaaacgtgacacgattttgacaac 30143166  T
Q  101 tgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtat 200  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| |    
T  30143167 tgaagactgctatataagtgttctttgtagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtct 30143266  T
Q  201 ttgat 205  Q
    |||||    
T  30143267 ttgat 30143271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 13 - 205
Target Start/End: Original strand, 33351887 - 33352079
Alignment:
Q  13 caagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgcta 112  Q
    ||||| ||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  33351887 caagtattcaggataaggttggtcgtaccttgggtcatacgcaccaaacgtgtcatgatttgggaaaacgtgacacgattttgacagctgaagactgcta 33351986  T
Q  113 tataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    ||||||| ||||||||| |||||||||| ||| | |||||||||||||||||||||||||||| ||||||  |||||||||||||| ||||||    
T  33351987 tataagttttctttgcaaattttgaaggtgaggtggaagagagagaaacttgggaaatcaaagaaggtaactttagggttgagggtctttgat 33352079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 3 - 205
Target Start/End: Complemental strand, 12703080 - 12702877
Alignment:
Q  3 gcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaa-cgtgacacgattttgatagct 101  Q
    |||||||  ||||| |||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| || |    
T  12703080 gcttgctaagcaagctttcaggataaggttggtcgtacattgggtcgtacgcaccatacgtgtcacgatttgggaaaaacgtgacacgattttgacagtt 12702981  T
Q  102 gaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatt 201  Q
    ||||| || ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||    
T  12702980 gaagattgttatgtaagtgttctttgcatattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaaatttagggttgagggtctt 12702881  T
Q  202 tgat 205  Q
    ||||    
T  12702880 tgat 12702877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 4731383 - 4731587
Alignment:
Q  1 cggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagc 100  Q
    ||||||||||| || |||||||| ||||| ||||| |||||||||| |||| |||||||  |||||||||||||| ||||||||||||||||||||||||    
T  4731383 cggcttgctggacacgttttcagaataagattggtcgtaccttgggccgtaggcaccaactgtgtcacgatttggcaaaacgtgacacgattttgatagc 4731482  T
Q  101 tgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtat 200  Q
    |||||||| |||||||||||||||||| |||||||||||||| | |||||||||||||||||||  ||||||||||||||||  |||||||||||||| |    
T  4731483 tgaagactactatataagtgttctttgtagattttgaaggagcggttgaagagagagaaacttgaaaaatcaaaggaggtaactttagggttgagggtct 4731582  T
Q  201 ttgat 205  Q
    |||||    
T  4731583 ttgat 4731587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 5 - 205
Target Start/End: Complemental strand, 34254768 - 34254567
Alignment:
Q  5 ttgctgggcaag-ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaa-cgtgacacgattttgatagctg 102  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||| |||| ||||||| ||||||| ||||||||||||| ||  ||||    
T  34254768 ttgctgggcaagattttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgattggggaaaaacgtgacacgatttcgac-gctg 34254670  T
Q  103 aagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtattt 202  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||| ||||| |||    
T  34254669 aagattgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggcaactttagggtttagggtcttt 34254570  T
Q  203 gat 205  Q
    |||    
T  34254569 gat 34254567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 2 - 205
Target Start/End: Original strand, 17982378 - 17982582
Alignment:
Q  2 ggcttgctgggcaag-ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaa-cgtgacacgattttgatag 99  Q
    ||||||||||||||| |||| |||||||||||||| ||||||||| ||||||||| ||| |||| ||||||| ||||||| ||||||||||||||||  |    
T  17982378 ggcttgctgggcaagatttttaggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgattggggaaaaacgtgacacgattttgac-g 17982476  T
Q  100 ctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggta 199  Q
    | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||  |||||||| |||||     
T  17982477 cagaagacagctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaagcaactttagggtttagggtc 17982576  T
Q  200 tttgat 205  Q
    ||||||    
T  17982577 tttgat 17982582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 2 - 205
Target Start/End: Complemental strand, 34256947 - 34256743
Alignment:
Q  2 ggcttgctgggcaag-ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaa-cgtgacacgattttgatag 99  Q
    ||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||| ||| |||| ||||||| ||||||| ||||||||||||| ||  |    
T  34256947 ggcttgctgagcaagattttcaggataagattggttgtaccttgggtcgtacgcatcaatcgtggcacgattggggaaaaacgtgacacgatttcgac-g 34256849  T
Q  100 ctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggta 199  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||  |||||||| |||||     
T  34256848 ctgaagattgctatataagtgttctttgcagattttgaaggagagcttgaagaaagataaacttgggaaatcaaaggaggcaactttagggtttagggtc 34256749  T
Q  200 tttgat 205  Q
    ||||||    
T  34256748 tttgat 34256743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 4 - 195
Target Start/End: Original strand, 5702104 - 5702295
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctga 103  Q
    ||||||||| |  ||||||||||||||||||| ||||||||| | ||||||||||| ||||||||||||||| |||||||| ||||||||||| ||||||    
T  5702104 cttgctgggtacattttcaggataaggttggtcgtaccttggattgtacgcaccaatcgtgtcacgatttggcaaaacgtgtcacgattttgacagctga 5702203  T
Q  104 agactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||   ||||||||||||  |||||||||||    
T  5702204 agactgctatataagtgttcttgtgcagattttgaaggagaggttgaagagagagaaactt-ggattacaaaggaggtaactttagggttgag 5702295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 2 - 198
Target Start/End: Complemental strand, 1746661 - 1746464
Alignment:
Q  2 ggcttgctgggcaag-ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaa-cgtgacacgattttgatag 99  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||| ||| |||| ||||||| ||||||| ||||||||||||||||  |    
T  1746661 ggcttgctgggcaagattttcaggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgattggggaaaaacgtgacacgattttgac-g 1746563  T
Q  100 ctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggt 198  Q
    | ||||||  |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| | ||  |||||||| |||||    
T  1746562 cagaagacaactatataagtgttctttgcagattttgaagaagagctggaagagagagaaacttgggaaatcaaaggaagcaactttagggtttagggt 1746464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 16 - 195
Target Start/End: Original strand, 23799212 - 23799391
Alignment:
Q  16 gttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatat 115  Q
    ||||| || ||||||||||| |||| ||||||||||||||||||  ||||||||||||||  ||||||||||||||||||| ||||||||||||||||||    
T  23799212 gtttttagaataaggttggtcgtacgttgggtcgtacgcaccaattgtgtcacgatttggacaaacgtgacacgattttgacagctgaagactgctatat 23799311  T
Q  116 aagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    |||||||||| |||| ||||||||||| ||||||||||||||||||||| |||   ||||||||||||  |||||||||||    
T  23799312 aagtgttcttgtgcatattttgaaggatagcttgaagagagagaaactt-ggattacaaaggaggtaactttagggttgag 23799391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 19948764 - 19948588
Alignment:
Q  2 ggcttgctgggcaag-ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaa-cgtgacacgattttgatag 99  Q
    |||||||||| |||| |||| | |||||| ||||| ||||||||| ||||||||| ||| |||| ||||||| ||||||| ||||||||||||||||  |    
T  19948764 ggcttgctggacaagatttttatgataagtttggtcgtaccttggatcgtacgcatcaatcgtggcacgattggggaaaaacgtgacacgattttgac-g 19948666  T
Q  100 ctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaagga 177  Q
    | ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19948665 cagaagacaactatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaagga 19948588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 2 - 205
Target Start/End: Original strand, 31217982 - 31218186
Alignment:
Q  2 ggcttgctgggcaag-ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaa-cgtgacacgattttgatag 99  Q
    |||||| |||||||| |||| |||||||||||||| ||||||||| || |||||| ||| |||| ||||||| || |||| ||||||||||||||||  |    
T  31217982 ggcttgttgggcaagatttttaggataaggttggtcgtaccttggatcatacgcatcaatcgtgacacgattgggaaaaaacgtgacacgattttgac-g 31218080  T
Q  100 ctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggta 199  Q
    | |||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| | ||  |||||||| |||||     
T  31218081 cagaagacagctatataagtgttctttgtagattttgaagaagagcttgaagagagagaaacttgggaaatcaaaggaagcaactttagggtttagggtc 31218180  T
Q  200 tttgat 205  Q
    ||||||    
T  31218181 tttgat 31218186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 27811023 - 27811207
Alignment:
Q  1 cggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagc 100  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||                    |||||||||| |||    
T  27811023 cggcttgctgggcaagttttcaggataaggttggtcgtatcttgggttgtacgcaccaaacgtgtc--------------------acgattttgacagc 27811102  T
Q  101 tgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtat 200  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||| |||||||||||||||||||||  |||||||||||||| |    
T  27811103 tgaagactgctatataagtgttctttgcatattttgaaggaaagctggaagagagagaaaattgggaaatcaaaggaggtaaatttagggttgagggtct 27811202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 2 - 177
Target Start/End: Original strand, 44303579 - 44303755
Alignment:
Q  2 ggcttgctgggcaagttttc-aggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaa-cgtgacacgattttgatag 99  Q
    ||||||||||||||| |||| |||||||||||||| ||||||||| || |||||| |||  ||| ||||||| ||||||| ||||||||||||| ||  |    
T  44303579 ggcttgctgggcaagatttccaggataaggttggtcgtaccttggatcatacgcatcaattgtggcacgattggggaaaatcgtgacacgatttcgac-g 44303677  T
Q  100 ctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaagga 177  Q
    | |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  44303678 cagaagacagctatataagtgttctttgcagattttgaaagagagcttgaagagagagaaacttgagaaatcaaagga 44303755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 99 - 205
Target Start/End: Original strand, 42498017 - 42498123
Alignment:
Q  99 gctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggt 198  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  42498017 gctgaagactgctatataactgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggt 42498116  T
Q  199 atttgat 205  Q
     ||||||    
T  42498117 ctttgat 42498123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 16 - 167
Target Start/End: Complemental strand, 3051582 - 3051430
Alignment:
Q  16 gttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatat 115  Q
    ||||||| |||||||||||| |||| |||||||||| ||| ||| |||| ||||| || || || |||||||| ||||||||||||| ||| | ||||||    
T  3051582 gttttcaagataaggttggtcgtacattgggtcgtatgcatcaatcgtgacacgaatttggcaatcgtgacacaattttgatagctgcagagtactatat 3051483  T
Q  116 aagtg-ttctttgcagattttgaaggagagcttgaagagagagaaacttggga 167  Q
    ||||| |||| ||||||||||||| ||||||||||||||||||||||||||||    
T  3051482 aagtgtttctatgcagattttgaaagagagcttgaagagagagaaacttggga 3051430  T

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Target: chr8; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 42435649 - 42435558
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttg 95  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  42435649 cttgcttggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgacatgattttg 42435558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 17 - 174
Target Start/End: Complemental strand, 4743620 - 4743463
Alignment:
Q  17 ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatata 116  Q
    ||||||||||||||||||| ||||| ||||||||||||| ||| |||||||| |||||| ||||||| |||||  ||||| || ||||||||||||||||    
T  4743620 ttttcaggataaggttggtcgtaccgtgggtcgtacgcatcaaccgtgtcacaatttggcaaaacgtcacacgtatttgacagatgaagactgctatata 4743521  T
Q  117 agtg-ttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaa 174  Q
    |||| |||||||||||||||||| | | | || |||||||  |||||||||||||||||    
T  4743520 agtgtttctttgcagattttgaaag-gtggttcaagagaggaaaacttgggaaatcaaa 4743463  T

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Target: chr8; HSP #21
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 45 - 195
Target Start/End: Complemental strand, 7412771 - 7412622
Alignment:
Q  45 ggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatataagtgttctt-tgcagattttgaaggaga 143  Q
    ||||||||| | ||| | || |||||||||| |||||||| |||||||||   |||||||||||||||||||||||||||| ||||||||||||||||||    
T  7412771 ggtcgtacgtatcaatcatggcacgatttgg-aaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgcagattttgaaggaga 7412673  T
Q  144 gcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    |||||||||||||||||||| |||   ||||||||||||  |||||||||||    
T  7412672 gcttgaagagagagaaactt-ggattacaaaggaggtaactttagggttgag 7412622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 4283053 - 4283147
Alignment:
Q  1 cggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttg 95  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| | ||||||||||| |||||||| ||||||    
T  4283053 cggcttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtatgcaccaaacgtgttaggatttgggaaatcgtgacaccattttg 4283147  T

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Target: chr8; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 81 - 205
Target Start/End: Original strand, 4733610 - 4733738
Alignment:
Q  81 cgtgacacgattttgatagctgaagactgctatataagtgttcttt--gcagattttgaaggagagcttgaagag--agagaaacttgggaaatcaaagg 176  Q
    |||| ||||||||||| || |||||||| |||||||||||||||||  |||||||||||||||||| ||||||||  ||||||||||||||||||||| |    
T  4733610 cgtgtcacgattttgacagttgaagactactatataagtgttctttttgcagattttgaaggagaggttgaagagagagagaaacttgggaaatcaaaag 4733709  T
Q  177 aggtaatgttagggttgagggtatttgat 205  Q
    ||||||  |||||||||||||| ||||||    
T  4733710 aggtaactttagggttgagggtctttgat 4733738  T

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Target: chr8; HSP #24
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 81 - 177
Target Start/End: Complemental strand, 19945722 - 19945627
Alignment:
Q  81 cgtgacacgattttgatagctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaagga 177  Q
    |||| |||||||||||  || |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  19945722 cgtggcacgattttgac-gcagaagacagctatataagtgttctttgcagattttgaaggagagcttgaagagagacaaacttgggaaatcaaagga 19945627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 78 - 165
Target Start/End: Original strand, 4696306 - 4696394
Alignment:
Q  78 aaacgtgacacgattttgatagctgaagactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgg 165  Q
    ||||||||||||||||||| |||||||||| | |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  4696306 aaacgtgacacgattttgacagctgaagaccgttatataagggttcttgtgcagattttgaaggagagcttgaagagagagaaacttgg 4696394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 86 - 195
Target Start/End: Complemental strand, 4456419 - 4456310
Alignment:
Q  86 cacgattttgatagctgaagactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatg 184  Q
    ||||||||||| |||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||   ||||||||||||      
T  4456419 cacgattttgacagctgaagacggctatataagtgttcttgtgcagattttgaagaagagcttgaagagagagaaactt-ggattacaaaggaggtaact 4456321  T
Q  185 ttagggttgag 195  Q
    |||||||||||    
T  4456320 ttagggttgag 4456310  T

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Target: chr8; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 4 - 195
Target Start/End: Original strand, 19175357 - 19175569
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttg------------------ggaaaacgtga 85  Q
    ||||||||| | ||||||||||||||||||||| |||||||||||||| ||||||| |||| |||||||||                  |||||||||||    
T  19175357 cttgctgggtacgttttcaggataaggttggttataccttgggtcgtatgcaccaatcgtgccacgatttggaaaacgtgatacgatttggaaaacgtga 19175456  T
Q  86 cacgattttgatagctgaagactgctatataagtgttctt-tgcagattttgaaggag---agcttgaagagagagaaacttgggaaatcaaaggaggta 181  Q
     |||||||||| |||||||||||| ||||||||||||||| | ||| |||||||||||   ||||||||| ||||||||||| |||   |||||||||||    
T  19175457 tacgattttgacagctgaagactgttatataagtgttcttgtacagtttttgaaggagatcagcttgaagtgagagaaactt-ggattacaaaggaggta 19175555  T
Q  182 atgttagggttgag 195  Q
    |  |||||||||||    
T  19175556 actttagggttgag 19175569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 6 - 139
Target Start/End: Original strand, 10014889 - 10015023
Alignment:
Q  6 tgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaag 105  Q
    |||| |||| |||| ||||||||||||||| ||||||||||||||| ||| ||| ||||||||||||||   ||  |||||||  |||||| | ||||||    
T  10014889 tgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacgatttgaccaattgtgacacatttttgacaactgaag 10014988  T
Q  106 actgctatataagtg-ttctttgcagattttgaag 139  Q
    |||| ||| |||||| |||||||||||||||||||    
T  10014989 actgatatgtaagtgtttctttgcagattttgaag 10015023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 22976043 - 22976135
Alignment:
Q  3 gcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttg 95  Q
    ||||||| | |||||||||||||||||||| || |||| |||||||| |||||||||||||||||||||| |||||| ||| |||||| ||||    
T  22976043 gcttgcttgacaagttttcaggataaggtttgtcgtacattgggtcgcacgcaccaaacgtgtcacgattcgggaaatcgtaacacgactttg 22976135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 4696252 - 4696312
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtg 64  Q
    |||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  4696252 cttgttgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtg 4696312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 11383515 - 11383585
Alignment:
Q  3 gcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgattt 73  Q
    ||||||||||||| |||||| |||||||||||| |||| |||||||||||||| ||| |||||||||||||    
T  11383515 gcttgctgggcaaattttcaagataaggttggtcgtactttgggtcgtacgcatcaaccgtgtcacgattt 11383585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 40221273 - 40221343
Alignment:
Q  3 gcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgattt 73  Q
    ||||| ||| || ||||||||||||||||| || || ||||||||||||||||||||||||||||||||||    
T  40221273 gcttgttggacacgttttcaggataaggtttgtcgtgccttgggtcgtacgcaccaaacgtgtcacgattt 40221343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 1345812 - 1345717
Alignment:
Q  3 gcttgctgggcaagttttcaggataaggttggttgtac--cttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttga 96  Q
    ||||||| | || |||||||||||||||||||| ||||  ||||||||||||||| ||| | ||||||| |||  | |||||||||||||||||||    
T  1345812 gcttgcttgacacgttttcaggataaggttggtcgtacaccttgggtcgtacgcatcaaccatgtcacggttttaggaaacgtgacacgattttga 1345717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 5689136 - 5689200
Alignment:
Q  141 agagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    ||||||| |||||||||||||| ||||||||||||||| |||  |||||||||||||| ||||||    
T  5689136 agagcttcaagagagagaaactagggaaatcaaaggagataactttagggttgagggtctttgat 5689200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 18141685 - 18141749
Alignment:
Q  141 agagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    ||||||| |||||||||||||| || ||||| ||||||||||| |||||||||||||| ||||||    
T  18141685 agagcttcaagagagagaaactaggaaaatcgaaggaggtaattttagggttgagggtctttgat 18141749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 2627581 - 2627642
Alignment:
Q  115 taagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaagg 176  Q
    ||||||||||| ||||||||| ||||||||| | |||||||||||||||||||||||||||||    
T  2627581 taagtgttcttgtgcagattt-gaaggagagttggaagagagagaaacttgggaaatcaaagg 2627642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 205
Target Start/End: Complemental strand, 3303982 - 3303909
Alignment:
Q  132 ttttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||||| || ||| || |||||||| |||||||||||||||||||||||||  ||| |||||||||| ||||||    
T  3303982 ttttgagggggaggttcaagagagaaaaacttgggaaatcaaaggaggtaactttacggttgagggtctttgat 3303909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 4733565 - 4733622
Alignment:
Q  16 gttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgattt 73  Q
    ||||||||||||  ||| || ||||||||||||||||||||||| |||||||||||||    
T  4733565 gttttcaggatacagtttgtcgtaccttgggtcgtacgcaccaaccgtgtcacgattt 4733622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 130 - 194
Target Start/End: Complemental strand, 1872237 - 1872173
Alignment:
Q  130 gattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttga 194  Q
    |||||||| ||||||||| |||||||||||||||| |||||||||| | ||||  ||||||||||    
T  1872237 gattttgagggagagcttcaagagagagaaacttgagaaatcaaagaaagtaactttagggttga 1872173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 205
Target Start/End: Original strand, 40320940 - 40320996
Alignment:
Q  149 aagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||||||||||||| |||||||||||||||||||  || ||||||||||| ||||||    
T  40320940 aagagagagaaactagggaaatcaaaggaggtaactttcgggttgagggtctttgat 40320996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 42497940 - 42498012
Alignment:
Q  2 ggcttgctgggcaag-ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgattt 73  Q
    ||||||||||||||| |||||||||||||||| || |||||||||||| |||||| ||| |||| || |||||    
T  42497940 ggcttgctgggcaagattttcaggataaggttagtcgtaccttgggtcctacgcatcaatcgtgacatgattt 42498012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 196
Target Start/End: Complemental strand, 29796618 - 29796571
Alignment:
Q  149 aagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagg 196  Q
    |||||||||||||||| |||||||||||||||||  ||||||||||||    
T  29796618 aagagagagaaacttgagaaatcaaaggaggtaactttagggttgagg 29796571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 1292768 - 1292702
Alignment:
Q  139 ggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    ||||||||| |||||||  |||||||| |||||||| |||||||  |||||||||||||| ||||||    
T  1292768 ggagagcttcaagagaggaaaacttggaaaatcaaatgaggtaactttagggttgagggtctttgat 1292702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 32902493 - 32902435
Alignment:
Q  138 aggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagg 196  Q
    ||||| |||| |||||||||||||||||||||||| | |||||||  ||||||||||||    
T  32902493 aggagggcttcaagagagagaaacttgggaaatcagatgaggtaactttagggttgagg 32902435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 205
Target Start/End: Original strand, 6598836 - 6598901
Alignment:
Q  140 gagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||| ||| |||||||  ||||||||||||||||||||| |||  |||||||||||||| ||||||    
T  6598836 gagaacttcaagagaggaaaacttgggaaatcaaaggagataactttagggttgagggtctttgat 6598901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 205
Target Start/End: Original strand, 6674289 - 6674354
Alignment:
Q  140 gagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||| ||| |||||||  ||||||||||||||||||||| |||  |||||||||||||| ||||||    
T  6674289 gagaacttcaagagaggaaaacttgggaaatcaaaggagataactttagggttgagggtctttgat 6674354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 205
Target Start/End: Original strand, 8153629 - 8153690
Alignment:
Q  144 gcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||| |||||||||||| || ||||||||||||||||||| ||| ||||||| || ||||||    
T  8153629 gctttaagagagagaaatttaggaaatcaaaggaggtaattttaaggttgagagtctttgat 8153690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 10929666 - 10929718
Alignment:
Q  141 agagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttg 193  Q
    ||||||| |||||||  |||||||||||||||||||||||||  |||||||||    
T  10929666 agagcttcaagagaggaaaacttgggaaatcaaaggaggtaactttagggttg 10929718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 30291457 - 30291521
Alignment:
Q  141 agagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    ||||||| |||| ||||||||| || ||||||||||||||||  |||||||||| ||| ||||||    
T  30291457 agagcttcaagaaagagaaactaggaaaatcaaaggaggtaactttagggttgatggtctttgat 30291521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 195
Target Start/End: Complemental strand, 28307907 - 28307844
Alignment:
Q  132 ttttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    ||||||| |||||||||||||||||||||||| |||   ||||||||||||  |||| ||||||    
T  28307907 ttttgaatgagagcttgaagagagagaaacttaggattacaaaggaggtaactttagagttgag 28307844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 8910975 - 8911012
Alignment:
Q  58 aaacgtgtcacgatttgg-gaaaacgtgacacgatttt 94  Q
    |||||||||||||||||| |||||||||||||||||||    
T  8910975 aaacgtgtcacgatttggtgaaaacgtgacacgatttt 8911012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 41365151 - 41365086
Alignment:
Q  140 gagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||| ||| |||||||  ||||||| ||||||||| |||||||  |||||||||||||| ||||||    
T  41365151 gagaacttcaagagaggaaaacttgtgaaatcaaatgaggtaactttagggttgagggtctttgat 41365086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 38249155 - 38249119
Alignment:
Q  58 aaacgtgtcacgatttgggaaaacgtgacacgatttt 94  Q
    |||||||||||||||||  ||||||||||||||||||    
T  38249155 aaacgtgtcacgatttgccaaaacgtgacacgatttt 38249119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 153; Significance: 3e-81; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 4 - 196
Target Start/End: Complemental strand, 2837284 - 2837092
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctga 103  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||    
T  2837284 cttgctgggtaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcatgatttgggaaaacgtaacacgattttgacagctga 2837185  T
Q  104 agactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagg 196  Q
    |||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  2837184 agactgctatataagtgttctttgtaaattttgaaggagagtttgaagagagagaaacttgggaaatcaaaggaggtaattttaaggttgagg 2837092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 2 - 205
Target Start/End: Complemental strand, 2334860 - 2334656
Alignment:
Q  2 ggcttgctgggcaag-ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaa-cgtgacacgattttgatag 99  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||| || ||| |||| ||||||||||||||| ||||||||||||| ||  |    
T  2334860 ggcttgctgggcaagattttcaggataaggttggtcgtaccttgggtcgtacacatcaatcgtgacacgatttgggaaaaacgtgacacgatttcgac-g 2334762  T
Q  100 ctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggta 199  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  2334761 ctgaagactgctatataagtgttctttgcagattttgaaggtgagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggta 2334662  T
Q  200 tttgat 205  Q
    ||||||    
T  2334661 tttgat 2334656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 36318452 - 36318259
Alignment:
Q  1 cggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagc 100  Q
    ||||||||||| || |||||||||||||||||||| ||||||||  ||||||||||||| |||||||| |||||  |||||||||||||||||||| |||    
T  36318452 cggcttgctggccacgttttcaggataaggttggtcgtaccttgaatcgtacgcaccaaccgtgtcacaatttgacaaaacgtgacacgattttgacagc 36318353  T
Q  101 tgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttga 194  Q
    |||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||  ||||||||||    
T  36318352 tgaagactgctatataagtgttctttgcagattttgaaggagaggtaaaagagagagaaacttgggaaatcaaaggaggtaactttagggttga 36318259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 45 - 205
Target Start/End: Original strand, 39284654 - 39284814
Alignment:
Q  45 ggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatataagtgttctttgcagattttgaaggagag 144  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  39284654 ggtcgtacgcaccaaatgtgtcacgatttgggaaaacgtgacatgattttgacagctgaagactgctatataagtgttctttgcagattttgaaggagag 39284753  T
Q  145 cttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
     |||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||    
T  39284754 gttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgat 39284814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 4 - 205
Target Start/End: Complemental strand, 36988516 - 36988314
Alignment:
Q  4 cttgctgggcaagtttt-caggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttg-ggaaaacgtgacacgattttgatagct 101  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||  ||| |||||||   |||||| |||||||||||||||  |||    
T  36988516 cttgctgggcaagtttttcaggataaggttggtcgtaccttgggtcgtacgcatcaattgtgacacgattgatggaaaatgtgacacgattttgac-gct 36988418  T
Q  102 gaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatt 201  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||    
T  36988417 gaagactgctatataagtgttctttgcatattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctt 36988318  T
Q  202 tgat 205  Q
    ||||    
T  36988317 tgat 36988314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 4 - 165
Target Start/End: Complemental strand, 34389323 - 34389162
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctga 103  Q
    ||||||||| | |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||    
T  34389323 cttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgattt-ggaaaacgtgacacgattttgacagctga 34389225  T
Q  104 agactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgg 165  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||    
T  34389224 agactgctatataagtgttcttgtgcagattttgaaggagagcttgatgtgagagaaacttgg 34389162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 2 - 205
Target Start/End: Complemental strand, 5723697 - 5723493
Alignment:
Q  2 ggcttgctgggcaag-ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaa-cgtgacacgattttgatag 99  Q
    |||||||||| |||| ||||||||||||||||||| ||||||||||||||||||| ||| |||| ||||||| ||||||| ||||||||||||| ||  |    
T  5723697 ggcttgctggacaagattttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgattggggaaaaacgtgacacgatttcgac-g 5723599  T
Q  100 ctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggta 199  Q
    ||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||  ||||||||  ||||     
T  5723598 ctgaagattgctatataaatgttctttgcagattttgaagaagagcttgaagagagagaaacttgggaaatcaaaggaggcaactttagggtttggggtc 5723499  T
Q  200 tttgat 205  Q
    ||||||    
T  5723498 tttgat 5723493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 4 - 195
Target Start/End: Original strand, 33528248 - 33528439
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctga 103  Q
    ||||||||| | |||||||| ||||||||| | ||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||| | | ||||    
T  33528248 cttgctgggtacgttttcagaataaggttgatcgtaccttgggtcgtacgcaccaatcgtgtcacgatttggacaaacgtgacacgattttaacaactga 33528347  T
Q  104 agactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||   ||||||||||||  |||||||||||    
T  33528348 agactgctatataagtgttcttgtgcagattttgaaggagagcttgaagagagagaaactt-ggattacaaaggaggtaactttagggttgag 33528439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 4 - 165
Target Start/End: Complemental strand, 21630418 - 21630256
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctga 103  Q
    ||||||||||| |||||||||||||||||||| |||| ||||||||||| |||||| |||||||||||||||  ||||||||||||||||||| |||| |    
T  21630418 cttgctgggcacgttttcaggataaggttggtcgtactttgggtcgtacacaccaatcgtgtcacgatttggacaaacgtgacacgattttgacagctaa 21630319  T
Q  104 agactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgg 165  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||    
T  21630318 agactgctatataagtgttcttgtgtagattttgaaggagagcttgaagggagagaaacttgg 21630256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 2 - 205
Target Start/End: Original strand, 45099480 - 45099684
Alignment:
Q  2 ggcttgctgggcaag-ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaa-cgtgacacgattttgatag 99  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||  ||||||||| ||| |||| ||||||| ||||||| ||||||||||||||||  |    
T  45099480 ggcttgctgggcaagattttcaggataaggttggtcgtaccttgaatcgtacgcatcaatcgtggcacgattggggaaaaacgtgacacgattttgac-g 45099578  T
Q  100 ctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggta 199  Q
    | |||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| | ||  |||||||| |||||     
T  45099579 cagaagacagctatataagtgttctttgtagattttgaaggtgagcttgaagagagagaaacttgggaaatcaaaggaagcaactttagggtttagggtc 45099678  T
Q  200 tttgat 205  Q
    ||||||    
T  45099679 tttgat 45099684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 4 - 195
Target Start/End: Original strand, 14698633 - 14698824
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctga 103  Q
    |||| ||||||  ||||||||||||||||||| ||||||||||||||||||||||| | | |||||||||||  |||||||||||||||||||||| |||    
T  14698633 cttgttgggcacattttcaggataaggttggtcgtaccttgggtcgtacgcaccaaccatttcacgatttggacaaacgtgacacgattttgatagttga 14698732  T
Q  104 agactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    |||||||||||||||||||||| || |||||||||||||||||||  |||||||||||||| |||   ||||||||||||  |||||||||||    
T  14698733 agactgctatataagtgttcttgtgtagattttgaaggagagcttttagagagagaaactt-ggattacaaaggaggtaactttagggttgag 14698824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 4 - 163
Target Start/End: Complemental strand, 20522695 - 20522535
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctga 103  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||  ||||||||||||||||||| |||| |    
T  20522695 cttgctgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacaatttggacaaacgtgacacgattttgacagctaa 20522596  T
Q  104 agactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaactt 163  Q
    | ||||||||| |||||||||| ||||||||||||||| ||||||| ||||||||||||||    
T  20522595 aaactgctataaaagtgttcttctgcagattttgaaggtgagcttggagagagagaaactt 20522535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 16 - 165
Target Start/End: Original strand, 23078108 - 23078257
Alignment:
Q  16 gttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatat 115  Q
    |||||||||||||||||||| ||| ||||||||||||||||||| |||| |||||||| |||||||||||||| ||||||| || |||||||||||||||    
T  23078108 gttttcaggataaggttggtcgtatcttgggtcgtacgcaccaatcgtgccacgattt-ggaaaacgtgacacaattttgacagttgaagactgctatat 23078206  T
Q  116 aagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgg 165  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  23078207 aagtgttcttgtgcagattttgaaggagagcttgaagtgagagaaacttgg 23078257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 4503575 - 4503399
Alignment:
Q  2 ggcttgctgggcaag-ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaa-cgtgacacgattttgatag 99  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||| |||  ||| ||||||| ||||||| ||||||||||||||||  |    
T  4503575 ggcttgctgggcaagattttcaggataaggttggtcgtaccttggatcgtacgcatcaattgtggcacgattggggaaaaacgtgacacgattttgac-g 4503477  T
Q  100 ctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaagga 177  Q
      ||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  4503476 tagaagacaactatataagtgttctttgcagattttgaaggagagctagaagagagagaaacttgggaaatcaaagga 4503399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 4 - 195
Target Start/End: Complemental strand, 33118608 - 33118417
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctga 103  Q
    |||||||||||  |||||| |||||||||||  ||||||||||||||||||||||| |||||||||||||||  |||| |||||||||||||| | ||||    
T  33118608 cttgctgggcacattttcaagataaggttggccgtaccttgggtcgtacgcaccaatcgtgtcacgatttggacaaacatgacacgattttgacaactga 33118509  T
Q  104 agactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    |||||||||||||||||||||| |||||||||||||| |||||||  |||||||||||||| |||   ||||||||||||  |||||||||||    
T  33118508 agactgctatataagtgttcttgtgcagattttgaagaagagcttttagagagagaaactt-ggattacaaaggaggtaactttagggttgag 33118417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 81 - 205
Target Start/End: Original strand, 38312045 - 38312169
Alignment:
Q  81 cgtgacacgattttgatagctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggt 180  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  38312045 cgtgacacgattttgacagctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaatttgggaaatcaaaggaggt 38312144  T
Q  181 aatgttagggttgagggtatttgat 205  Q
    ||  |||||||||||| | ||||||    
T  38312145 aactttagggttgaggttctttgat 38312169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 49 - 205
Target Start/End: Original strand, 29867641 - 29867798
Alignment:
Q  49 gtacgcaccaaacgtgtcacgatttgggaaaa-cgtgacacgattttgatagctgaagactgctatataagtgttctttgcagattttgaaggagagctt 147  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||| ||||||| ||||||||    
T  29867641 gtacgcaccaaacgtgtcacgatttgggaaaaacgtgacacgattttgacagatgaagactgctatataagtgttctttgcagtttttgaaagagagctt 29867740  T
Q  148 gaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
     ||||||||||||||| || |||||||| ||||||   | ||||||||||| ||||||    
T  29867741 aaagagagagaaactttgggaatcaaagaaggtaactattgggttgagggtctttgat 29867798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 16 - 163
Target Start/End: Original strand, 10706889 - 10707036
Alignment:
Q  16 gttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatat 115  Q
    ||||| |||||||||||||| |||||||||||||||| |||||| |||| |||| ||||| |||||||||||||||||||| ||||||||||||||||||    
T  10706889 gttttaaggataaggttggtcgtaccttgggtcgtacacaccaatcgtgccacggtttgg-aaaacgtgacacgattttgacagctgaagactgctatat 10706987  T
Q  116 aagtgttctt-tgcagattttgaaggagagcttgaagagagagaaactt 163  Q
    |||||||||| |||||||||||||| |||||| ||||||||||||||||    
T  10706988 aagtgttcttgtgcagattttgaagaagagctggaagagagagaaactt 10707036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 4 - 195
Target Start/End: Original strand, 28258802 - 28258992
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctga 103  Q
    ||||||||  |||||||||||||||||||||| ||||||||||||||||||| ||| |||| |||||||| |||||||||| |||||||||   | ||||    
T  28258802 cttgctggttaagttttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgattt-ggaaaacgtggcacgattttatcaactga 28258900  T
Q  104 agactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    |||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||| |||   ||||||||||||  |||||||||||    
T  28258901 agactgctatataagtgttcttgtgtagattttgaagaagagcttgaagagagagaaactt-ggattacaaaggaggtaactttagggttgag 28258992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 2 - 205
Target Start/End: Complemental strand, 36206108 - 36205902
Alignment:
Q  2 ggcttgctgggcaag-ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaa-cgtgacacgattttgatag 99  Q
    ||||||||||| ||| ||||||||||||||||||| ||||||||| | ||||||| |||  ||| ||||||| ||||||| ||||||||||||||||  |    
T  36206108 ggcttgctgggaaagattttcaggataaggttggtcgtaccttggattgtacgcatcaattgtggcacgattggggaaaaacgtgacacgattttgac-g 36206010  T
Q  100 ctgaagactgctatata--agtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgaggg 197  Q
    | |||||| ||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||  |||||||| ||||    
T  36206009 cagaagacagctatatataagtgttctttgcagattttgaaggtgagcttgaagagagagaaacttgggaaatcaaaggaagcaactttagggtttaggg 36205910  T
Q  198 tatttgat 205  Q
    | ||||||    
T  36205909 tctttgat 36205902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 17 - 203
Target Start/End: Original strand, 8389786 - 8389972
Alignment:
Q  17 ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatata 116  Q
    ||||||||||||||||||  ||||||||||||||||||||||| | ||||| ||||||| ||||| ||||||||||||||||||||||||||| ||| ||    
T  8389786 ttttcaggataaggttggacgtaccttgggtcgtacgcaccaatcatgtcatgatttggaaaaacatgacacgattttgatagctgaagactgttattta 8389885  T
Q  117 agtgtt-ctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttg 203  Q
    |||||| || |||||||||||||| |||||| |||||||||||||||| |||   |||||||| |||  |||||||||||||| ||||    
T  8389886 agtgttcctgtgcagattttgaagtagagctggaagagagagaaactt-ggattacaaaggagataactttagggttgagggtctttg 8389972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 75 - 205
Target Start/End: Complemental strand, 6595374 - 6595245
Alignment:
Q  75 ggaaaacgtgacacgattttgatagctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaa 174  Q
    ||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  6595374 ggaaaacgtgacacgattttgac-gttgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttaggaaatcaaa 6595276  T
Q  175 ggaggtaatgttagggttgagggtatttgat 205  Q
     |||||||  |||||||||||||| ||||||    
T  6595275 tgaggtaactttagggttgagggtctttgat 6595245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 17 - 165
Target Start/End: Complemental strand, 13569789 - 13569640
Alignment:
Q  17 ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatata 116  Q
    ||||||||||||||||| | ||||||||| ||||| ||||||| ||||||||||||||| ||||  |||||||||||||| ||||||||||| |||||||    
T  13569789 ttttcaggataaggttg-tcgtaccttggatcgtaagcaccaatcgtgtcacgatttggaaaaatttgacacgattttgacagctgaagactactatata 13569691  T
Q  117 agtgttctt-tgcagattttgaaggagagctt-gaagagagagaaacttgg 165  Q
    ||||||||| |||||||||| ||||||||||| | ||||||||||||||||    
T  13569690 agtgttcttgtgcagattttaaaggagagcttgggagagagagaaacttgg 13569640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 81 - 205
Target Start/End: Complemental strand, 17057732 - 17057608
Alignment:
Q  81 cgtgacacgattttgatagctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggt 180  Q
    ||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||| ||||||    
T  17057732 cgtgacacatttttgacagctgaagactgctatataagtgttctttgcagattttgaaggagagtttgaagagagagaaaatttggaaatcaacggaggt 17057633  T
Q  181 aatgttagggttgagggtatttgat 205  Q
    ||  |||||||||| ||| ||||||    
T  17057632 aactttagggttgaaggtctttgat 17057608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 81 - 205
Target Start/End: Complemental strand, 17085715 - 17085591
Alignment:
Q  81 cgtgacacgattttgatagctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggt 180  Q
    ||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||| ||||||    
T  17085715 cgtgacacatttttgacagctgaagactgctatataagtgttctttgcagattttgaaggagagtttgaagagagagaaaatttggaaatcaacggaggt 17085616  T
Q  181 aatgttagggttgagggtatttgat 205  Q
    ||  |||||||||| ||| ||||||    
T  17085615 aactttagggttgaaggtctttgat 17085591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 39483337 - 39483235
Alignment:
Q  16 gttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatat 115  Q
    |||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||  ||||||| ||| ||||||| ||||||||||||||||||    
T  39483337 gttttcaggataaggttggtcgtaccttgggtcttacgcaccaatcgtgtcacgatttggacaaacgtggcacaattttgacagctgaagactgctatat 39483238  T
Q  116 aag 118  Q
    |||    
T  39483237 aag 39483235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 81 - 195
Target Start/End: Original strand, 36757463 - 36757577
Alignment:
Q  81 cgtgacacgattttgatagctgaagactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaat-caaaggag 178  Q
    |||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||  || | ||||||||    
T  36757463 cgtgacacgattttgacagctgaagactgttatataagtgttcttgtgcagattttgaaggagagcttgaagtgagagaaacttg--aattacaaaggag 36757560  T
Q  179 gtaatgttagggttgag 195  Q
    ||||  |||||||||||    
T  36757561 gtaactttagggttgag 36757577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 35447535 - 35447451
Alignment:
Q  10 gggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttg 95  Q
    ||||||||||||| |||||||||| | |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  35447535 gggcaagttttcaagataaggttgctcgtaccttgggtcgtacgcaccaaacgtgtcacga-ttgggaaatcgtgacacgattttg 35447451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 149 - 205
Target Start/End: Complemental strand, 33162745 - 33162689
Alignment:
Q  149 aagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  33162745 aagagagagaaacttgggaaatcaaaggaggtaattttagggttgagggtctttgat 33162689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 32 - 205
Target Start/End: Complemental strand, 4484742 - 4484570
Alignment:
Q  32 tggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatataagtgttctt-tgcag 130  Q
    |||| |||||||||| |||||| ||||| |||| |||||| ||| ||| ||||||||||||||   ||  |||| ||  ||| ||||||||||| |||||    
T  4484742 tggtcgtaccttgggacgtacgtaccaatcgtgacacgatctgg-aaatcgtgacacgattttatcagtggaaggctagtatttaagtgttcttgtgcag 4484644  T
Q  131 attttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||| ||| ||||| | |||||||||||||||||||||||||||||  ||||   ||||||| ||||| ||||||    
T  4484643 attt-gaaagagagttggaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggtctttgat 4484570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 17865650 - 17865589
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgt 65  Q
    ||||||||| | |||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  17865650 cttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgt 17865589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 205
Target Start/End: Original strand, 30833107 - 30833274
Alignment:
Q  37 gtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatataagtgttctt-tgcagatttt 135  Q
    |||||||| | |||||| ||||| |||| ||||| |||| ||| ||||||||||||||   ||  |||||||  ||| ||||||||||| |||||||||     
T  30833107 gtaccttgtgacgtacgtaccaatcgtgacacgacttgg-aaatcgtgacacgattttatcagtggaagactagtatttaagtgttcttgtgcagattt- 30833204  T
Q  136 gaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    ||||| ||||| ||||||| |||||||||||||||||||||  ||||   ||||||| ||||| ||||||    
T  30833205 gaaggtgagctggaagagaaagaaacttgggaaatcaaagggagtaactctagggtttagggtttttgat 30833274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 11049402 - 11049465
Alignment:
Q  141 agagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||    
T  11049402 agagcttcaagagagagaaacttgggaaatcaaaggaggtaat-ttagggttgatggtctttgat 11049465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 36773414 - 36773478
Alignment:
Q  141 agagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    ||||||| |||||||||||||| |||||||||||||||||||  |||||||||||||| ||||||    
T  36773414 agagcttcaagagagagaaactagggaaatcaaaggaggtaactttagggttgagggtctttgat 36773478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 32 - 176
Target Start/End: Original strand, 32289329 - 32289472
Alignment:
Q  32 tggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatataagtgttctt-tgcag 130  Q
    |||| |||||||||| ||||||| |||| |||| |||||  ||| ||| ||||||||||||||   ||  || | ||  ||| ||||||||||| |||||    
T  32289329 tggtcgtaccttgggacgtacgctccaatcgtgacacgacctgg-aaatcgtgacacgattttatcagtggagggctagtatttaagtgttcttgtgcag 32289427  T
Q  131 attttgaaggagagcttgaagagagagaaacttgggaaatcaaagg 176  Q
    |||||||||| ||| | |||||||||||||||||||||||||||||    
T  32289428 attttgaagg-gagatggaagagagagaaacttgggaaatcaaagg 32289472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 159
Target Start/End: Complemental strand, 17865589 - 17865521
Alignment:
Q  92 tttgatagctgaagactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaa 159  Q
    ||||| |||| ||||||||||||||||||||||| |||| ||||||||| |||||||||||||| ||||    
T  17865589 tttgacagctaaagactgctatataagtgttcttgtgcaaattttgaagaagagcttgaagagacagaa 17865521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 11151895 - 11151830
Alignment:
Q  140 gagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||| ||| |||||||  |||||||||||||||||||||||||  |||||||||||||| ||||||    
T  11151895 gagaacttcaagagaggaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgat 11151830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 205
Target Start/End: Original strand, 11690365 - 11690430
Alignment:
Q  140 gagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||| ||| |||||||  |||||||||||||||||||||||||  |||||||||||||| ||||||    
T  11690365 gagaacttcaagagaggaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgat 11690430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 205
Target Start/End: Original strand, 42362216 - 42362281
Alignment:
Q  140 gagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||| ||| |||||||  |||||||||||||||||||||||||  |||||||||||||| ||||||    
T  42362216 gagaacttcaagagaggaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgat 42362281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 724030 - 723983
Alignment:
Q  158 aaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||||||||||||||||||||||||  |||||||||||||| ||||||    
T  724030 aaacttgggaaatcaaaggaggtaactttagggttgagggtctttgat 723983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 11067154 - 11067198
Alignment:
Q  138 aggagagcttgaagagagagaaacttgggaaatcaaaggaggtaa 182  Q
    ||||| |||| |||||||||||||| |||||||||||||||||||    
T  11067154 aggagggcttcaagagagagaaactagggaaatcaaaggaggtaa 11067198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 96
Target Start/End: Original strand, 7450872 - 7450907
Alignment:
Q  61 cgtgtcacgatttgggaaaacgtgacacgattttga 96  Q
    |||| |||||||||||||||||||||||||||||||    
T  7450872 cgtgacacgatttgggaaaacgtgacacgattttga 7450907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 12633017 - 12632966
Alignment:
Q  144 gcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    |||| ||||||||||||||||||||| |||||||| |||  |||||||||||    
T  12633017 gcttcaagagagagaaacttgggaaaccaaaggagataactttagggttgag 12632966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 14634112 - 14634065
Alignment:
Q  158 aaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||||||||||||||||||||||||  |||| ||||||||| ||||||    
T  14634112 aaacttgggaaatcaaaggaggtaactttagagttgagggtttttgat 14634065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 195
Target Start/End: Complemental strand, 40015273 - 40015206
Alignment:
Q  128 cagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    |||||||||||| |||||||||||||||||||| || ||    ||||||||||||  |||||||||||    
T  40015273 cagattttgaagtagagcttgaagagagagaaatttaggtttacaaaggaggtaactttagggttgag 40015206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 1632336 - 1632298
Alignment:
Q  58 aaacgtgtcacgatttgggaaaacgtgacacgattttga 96  Q
    ||||||| |||||||| ||||||||||||||||||||||    
T  1632336 aaacgtgacacgattttggaaaacgtgacacgattttga 1632298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 6266537 - 6266598
Alignment:
Q  115 taagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaagg 176  Q
    ||||||||||| ||||||||| |||||||||   ||||||||||| |||||||||||||||||    
T  6266537 taagtgttcttgtgcagattt-gaaggagagtgggaagagagagagacttgggaaatcaaagg 6266598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 14202711 - 14202646
Alignment:
Q  140 gagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||| ||| |||||||  ||||||||||||||||| |||||||  ||| |||||||||| ||||||    
T  14202711 gagaacttcaagagaggaaaacttgggaaatcaaatgaggtaactttatggttgagggtctttgat 14202646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 195
Target Start/End: Original strand, 34682102 - 34682146
Alignment:
Q  151 gagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    ||||||||||||||||||  ||||||||||||  |||||||||||    
T  34682102 gagagagaaacttgggaatacaaaggaggtaactttagggttgag 34682146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 125
Target Start/End: Complemental strand, 40739295 - 40739184
Alignment:
Q  14 aagttttcaggataaggtt-ggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgcta 112  Q
    |||||||||||||||||   ||| |||||||| | |||||| | ||| |||| |||||||||| ||| ||||||||||||||   || ||||||||  ||    
T  40739295 aagttttcaggataaggacaggtcgtaccttgtgacgtacgtatcaatcgtgacacgatttgg-aaatcgtgacacgattttatcagttgaagacttgta 40739197  T
Q  113 tataagtgttctt 125  Q
    | |||||||||||    
T  40739196 tttaagtgttctt 40739184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 20858 - 20654
Alignment:
Q  1 cggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagc 100  Q
    ||||||| |||| ||||||| || ||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||    
T  20858 cggcttgttgggaaagtttttagaataaggttggtcgtaccttgggtcgtacgcactaaacgtgtcacgatttggcaaaacgtaacacgattttgatagc 20759  T
Q  101 tgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtat 200  Q
    |||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||  |||||||||||||| |    
T  20758 tgaaaactgttatataagtgttctttgcagattttgaaggagagctagaagagagagaaactttggaaatcaaaggaggtaactttagggttgagggtct 20659  T
Q  201 ttgat 205  Q
    |||||    
T  20658 ttgat 20654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 119; Significance: 6e-61; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 4 - 165
Target Start/End: Complemental strand, 18234556 - 18234394
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctga 103  Q
    ||||||||| | |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||| ||||||    
T  18234556 cttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttggacaaacgtgacacgattttgacagctga 18234457  T
Q  104 agactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgg 165  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||    
T  18234456 agactgctatataagtgttcttgtgcagtttttgaaggagagcttgaagagaaagaaacttgg 18234394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 2 - 205
Target Start/End: Complemental strand, 5406641 - 5406437
Alignment:
Q  2 ggcttgctgggcaag-ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaa-cgtgacacgattttgatag 99  Q
    ||||||||||||||| |||| |||||||||||||| ||||||||||||||||||| ||| |||| ||||||| ||||||| ||||||||||||| ||  |    
T  5406641 ggcttgctgggcaagatttttaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgattggggaaaaacgtgacacgatttcgac-g 5406543  T
Q  100 ctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggta 199  Q
    ||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||  |||||||| |||||     
T  5406542 ctgaagattgctatataagtgttatttgcagattttgaaggtgagcttgaagagagagaaacttgggaaatcaaaggaggcaactttagggtttagggtc 5406443  T
Q  200 tttgat 205  Q
    ||||||    
T  5406442 tttgat 5406437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 2 - 205
Target Start/End: Complemental strand, 5410966 - 5410762
Alignment:
Q  2 ggcttgctgggcaag-ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaa-cgtgacacgattttgatag 99  Q
    ||||||||||||||| |||| |||||||||||||| ||||||||||||||||||| ||| |||| ||||||| ||||||| ||||||||||||| ||  |    
T  5410966 ggcttgctgggcaagatttttaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgattggggaaaaacgtgacacgatttcgac-g 5410868  T
Q  100 ctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggta 199  Q
    ||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||  |||||||| |||||     
T  5410867 ctgaagattgctatataagtgttatttgcagattttgaaggtgagcttgaagagagagaaacttgggaaatcaaaggaggcaactttagggtttagggtc 5410768  T
Q  200 tttgat 205  Q
    ||||||    
T  5410767 tttgat 5410762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 2 - 163
Target Start/End: Complemental strand, 22964173 - 22964012
Alignment:
Q  2 ggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagct 101  Q
    |||||||||| ||||||||||||||||||||||| ||||||||  |||||||| ||||||||||||| |||||||||||||||||||||||||||  |||    
T  22964173 ggcttgctggacaagttttcaggataaggttggtcgtaccttgtatcgtacgcgccaaacgtgtcacaatttgggaaaacgtgacacgattttgacggct 22964074  T
Q  102 gaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaactt 163  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||    
T  22964073 gaagactgctatataagtgttctttgcagattttgaactagagcttgaaaagagagaaactt 22964012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 2 - 163
Target Start/End: Original strand, 23824220 - 23824381
Alignment:
Q  2 ggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagct 101  Q
    |||||||||| ||||||||||||||||||||||| ||||||||  |||||||| ||||||||||||| |||||||||||||||||||||||||||  |||    
T  23824220 ggcttgctggacaagttttcaggataaggttggtcgtaccttgtatcgtacgcgccaaacgtgtcacaatttgggaaaacgtgacacgattttgacggct 23824319  T
Q  102 gaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaactt 163  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||    
T  23824320 gaagactgctatataagtgttctttgcagattttgaactagagcttgaaaagagagaaactt 23824381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 17 - 165
Target Start/End: Original strand, 31086110 - 31086260
Alignment:
Q  17 ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgg-gaaaacgtgacacgattttgatagctgaagactgctatat 115  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  31086110 ttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttggcaaaaacgtgacacgattttgatagctgaagactgctatat 31086209  T
Q  116 aagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgg 165  Q
    |||||||||| ||||||||||||||| ||||| ||||||||||||||||||    
T  31086210 aagtgttcttgtgcagattttgaaggtgagctggaagagagagaaacttgg 31086260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 2 - 179
Target Start/End: Complemental strand, 5411676 - 5411498
Alignment:
Q  2 ggcttgctgggcaag-ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaac-gtgacacgattttgatag 99  Q
    ||||||||||||||| |||||| |||||||||||| ||||||||||||||||||| ||| |||| ||||||| |||||||  |||||||||||| ||  |    
T  5411676 ggcttgctgggcaagattttcaagataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgattggggaaaaatgtgacacgatttcgac-g 5411578  T
Q  100 ctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggagg 179  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5411577 ctgaagattgctatataagtgttctttgcagattttgaaggtgagcttgaagagagagaaacttgggaaatcaaaggagg 5411498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 2 - 198
Target Start/End: Complemental strand, 31405117 - 31404920
Alignment:
Q  2 ggcttgctgggcaagt-tttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaa-cgtgacacgattttgatag 99  Q
    ||||||||||| |||  |||||||||||||||||| ||||||| ||||||||||| ||| |||| ||||||| ||||||| ||||||||||||| ||  |    
T  31405117 ggcttgctgggaaagactttcaggataaggttggtcgtaccttaggtcgtacgcatcaatcgtggcacgattggggaaaaacgtgacacgatttcgac-g 31405019  T
Q  100 ctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggt 198  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||| |||||    
T  31405018 ctgaagacagctatataagtgttatttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggcaactttagggtttagggt 31404920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 2 - 205
Target Start/End: Complemental strand, 33160797 - 33160592
Alignment:
Q  2 ggcttgctgggcaag-ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttg-ggaaaacgtgacacgattttgatag 99  Q
    ||||||||||||||| ||||||||||||||||||| |||| |||||||||||||| ||| |||| |||||||   |||||||||||||| |||||||  |    
T  33160797 ggcttgctgggcaagattttcaggataaggttggtcgtacattgggtcgtacgcatcaatcgtgacacgattgatggaaaacgtgacacaattttgac-g 33160699  T
Q  100 ctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagag-aaacttgggaaatcaaaggaggtaatgttagggttgagggt 198  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||| |||||||||||||||  ||||||||||| ||    
T  33160698 ctgaagactgctatataagtgttctttgcagattttgatggagagctggaagagagagaaaacttggggaatcaaaggaggtaactttagggttgagagt 33160599  T
Q  199 atttgat 205  Q
     ||||||    
T  33160598 ctttgat 33160592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 30834980 - 30834803
Alignment:
Q  2 ggcttgctgggcaag-ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaa--cgtgacacgattttgata 98  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||| ||| |||| ||||||| |||||||  |||||||||||||||| |    
T  30834980 ggcttgctgggcaagattttcaggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgattggggaaaaaacgtgacacgattttgaca 30834881  T
Q  99 gctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaagga 177  Q
     | ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  30834880 -cagaagacaactatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgagaaatcaaagga 30834803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 2 - 205
Target Start/End: Complemental strand, 33211627 - 33211424
Alignment:
Q  2 ggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagct 101  Q
    |||||| |||||| ||||| |||||| ||||  | |||| |||||||||||||||||| | ||||||||||||  ||||| |||||||||||||| ||||    
T  33211627 ggcttgttgggcacgtttttaggatatggtttatcgtactttgggtcgtacgcaccaaccatgtcacgatttgacaaaacatgacacgattttgacagct 33211528  T
Q  102 gaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatt 201  Q
     || |||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||  |||  ||||||||| ||    
T  33211527 caatactgctatataagtgttctttgcagattgtgaaggagaagttgaagagagagaaacttgggaaatcaaaggaggtaactttacagttgagggtctt 33211428  T
Q  202 tgat 205  Q
    ||||    
T  33211427 tgat 33211424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 16 - 195
Target Start/End: Original strand, 10076827 - 10077006
Alignment:
Q  16 gttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatat 115  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||  ||||||||||||| ||||| ||||||||| ||||||||    
T  10076827 gttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttggacaaacgtgacacgactttgacagctgaagattgctatat 10076926  T
Q  116 aagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    |  ||||||| |||||||||||||||||||||| ||||||||||||||| |||   ||||||||||||  |||||||||||    
T  10076927 atatgttcttgtgcagattttgaaggagagctttaagagagagaaactt-ggattacaaaggaggtaactttagggttgag 10077006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 2 - 179
Target Start/End: Complemental strand, 5407351 - 5407173
Alignment:
Q  2 ggcttgctgggcaag-ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaac-gtgacacgattttgatag 99  Q
    ||||||||||||||| |||||| |||||||||||| ||||||||||||||||||| ||| |||| |||||||   |||||  |||||||||||| ||  |    
T  5407351 ggcttgctgggcaagattttcaagataaggttggtcgtaccttgggtcgtacgcatcaatcgtgacacgattgaagaaaaatgtgacacgatttcgac-g 5407253  T
Q  100 ctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggagg 179  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5407252 ctgaagattgctatataagtgttctttgcagattttgaaggtgagcttgaagagagagaaacttgggaaatcaaaggagg 5407173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 16452756 - 16452598
Alignment:
Q  17 ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaa-cgtgacacgattttgatagctgaagactgctatat 115  Q
    ||||||||||||||||||| ||||||||||||||||||| ||| | || ||||||| ||||||| ||||||||||||| ||  | ||||||| |||||||    
T  16452756 ttttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcatggcacgattggggaaaaacgtgacacgatttagac-gatgaagacagctatat 16452658  T
Q  116 aagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaag 175  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16452657 aagtgttctttgcagattttgaaggtgagcttgaagagagagaaacttgggaaatcaaag 16452598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 17 - 165
Target Start/End: Original strand, 5017133 - 5017282
Alignment:
Q  17 ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatata 116  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||  |||| ||||||||||||||| |||||||||| ||||||||    
T  5017133 ttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttgaaaaaatgtgacacgattttgacagctgaagaccgctatata 5017232  T
Q  117 agtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgg 165  Q
    ||||||||| |||||||||||||||||||    |||| ||||||||||||    
T  5017233 agtgttcttgtgcagattttgaaggagaggaaaaagaaagagaaacttgg 5017282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 4 - 205
Target Start/End: Complemental strand, 9183450 - 9183270
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctga 103  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||                    ||||||||||||  |||||    
T  9183450 cttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtg--------------------acacgattttga-cgctga 9183372  T
Q  104 agactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttg 203  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||    
T  9183371 agactactatataagttttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttg 9183272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 11 - 162
Target Start/End: Original strand, 24435603 - 24435755
Alignment:
Q  11 ggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgc 110  Q
    |||| |||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||  || |||||||||| ||||| || ||||||||||    
T  24435603 ggcacgttttcaggataaggttggtcgtaccttgggttgtacgcaccaaccgtgtcacgatttggccaatcgtgacacgaatttgacagttgaagactgc 24435702  T
Q  111 tatataagtg-ttctttgcagattttgaaggagagcttgaagagagagaaact 162  Q
    |||||||||| || |||||| ||||||||| | ||||||||||||||||||||    
T  24435703 tatataagtgtttgtttgcaaattttgaagaatagcttgaagagagagaaact 24435755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 11 - 163
Target Start/End: Original strand, 21272620 - 21272773
Alignment:
Q  11 ggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgc 110  Q
    |||| ||||||||||||||||||||  |||||||| ||||||||||||| ||||||| |||||||  || |||||||| ||||||| | |||||||||||    
T  21272620 ggcacgttttcaggataaggttggtcataccttggatcgtacgcaccaaccgtgtcaagatttggccaatcgtgacacaattttgacaactgaagactgc 21272719  T
Q  111 tatataagtg-ttctttgcagattttgaaggagagcttgaagagagagaaactt 163  Q
    |||||||||| |||||||||| |||||||| ||| ||||||| |||||||||||    
T  21272720 tatataagtgtttctttgcagtttttgaagtagaacttgaagtgagagaaactt 21272773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 4 - 195
Target Start/End: Complemental strand, 31979990 - 31979794
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctga 103  Q
    ||||||||||| |||||||||||||||||||| |||| ||| |||||||||||||| |||||||||||||||  ||||||||||||||||||| |  |||    
T  31979990 cttgctgggcacgttttcaggataaggttggtcgtactttgagtcgtacgcaccaatcgtgtcacgatttggacaaacgtgacacgattttgacaattga 31979891  T
Q  104 agactgctatata----agtgtt--ctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    |||||||||||||    ||||||  |||| ||||||||||  ||||||||  |||||||||||||| |||   ||||||||||||  |||||||||||    
T  31979890 agactgctatatatataagtgttttctttccagattttgagagagagcttttagagagagaaactt-ggactgcaaaggaggtaactttagggttgag 31979794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 4 - 195
Target Start/End: Original strand, 5757103 - 5757293
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctga 103  Q
    ||||||||  |||||||||||||||||||||| ||||||| ||||||| | | ||| |||| |||||||| |||||||||| |||||||||   ||||||    
T  5757103 cttgctggttaagttttcaggataaggttggtcgtacctttggtcgtatgtatcaatcgtggcacgattt-ggaaaacgtggcacgattttatcagctga 5757201  T
Q  104 agactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    ||||||||| ||||||||| || ||||||||||| ||||||||| |||||||||||||||| |||   ||||||||||||  |||||||||||    
T  5757202 agactgctaaataagtgtttttgtgcagattttggaggagagctggaagagagagaaactt-ggattacaaaggaggtaactttagggttgag 5757293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 61 - 205
Target Start/End: Complemental strand, 5413775 - 5413631
Alignment:
Q  61 cgtgtcacgatttgggaaaa-cgtgacacgattttgatagctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaa 159  Q
    |||| ||||||| ||||||| ||| ||||||||| ||  |||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  5413775 cgtggcacgattggggaaaaacgttacacgatttcgac-gctgaagattgctatataagtgttctttgcagattttgaaggtgagcttgaagatagagaa 5413677  T
Q  160 acttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||||||||||||||||||| ||  |||||||| ||||| ||||||    
T  5413676 acttgggaaatcaaaggaggcaactttagggtttagggtctttgat 5413631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 21593173 - 21593267
Alignment:
Q  1 cggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttg 95  Q
    |||||||||||||| ||||| |||||||||||||| |||||||||||||| || ||||| |||||||||||||||||||| ||||||||||||||    
T  21593173 cggcttgctgggcatgtttttaggataaggttggtcgtaccttgggtcgttcgtaccaaccgtgtcacgatttgggaaaatgtgacacgattttg 21593267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 2 - 125
Target Start/End: Complemental strand, 16452883 - 16452759
Alignment:
Q  2 ggcttgctgggcaag-ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttggg-aaaacgtgacacgattttgatag 99  Q
    ||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||| ||| |||| ||||||| ||| ||||||||||||||||| ||  |    
T  16452883 ggcttgctgggaaagattttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgattggggaaaaacgtgacacgatttaga-cg 16452785  T
Q  100 ctgaagactgctatataagtgttctt 125  Q
     ||||||| |||||||||||||||||    
T  16452784 atgaagacagctatataagtgttctt 16452759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 3809362 - 3809276
Alignment:
Q  9 tgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttg 95  Q
    |||| |||||||||||||||||||||| ||||||||||||||||| |||||| |||||| ||||||||||| ||||| |||||||||    
T  3809362 tgggaaagttttcaggataaggttggtcgtaccttgggtcgtacgtaccaaatgtgtcatgatttgggaaatcgtgatacgattttg 3809276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 26661471 - 26661547
Alignment:
Q  16 gttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgatt 92  Q
    |||||||||||||||||||| |||||||||||||||||||||||   ||||||||||||||||||||||||| ||||    
T  26661471 gttttcaggataaggttggtcgtaccttgggtcgtacgcaccaacattgtcacgatttgggaaaacgtgacatgatt 26661547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 26767442 - 26767518
Alignment:
Q  16 gttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgatt 92  Q
    |||||||||||||||||||| |||||||||||||||||||||||   ||||||||||||||||||||||||| ||||    
T  26767442 gttttcaggataaggttggtcgtaccttgggtcgtacgcaccaacattgtcacgatttgggaaaacgtgacatgatt 26767518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 603680 - 603612
Alignment:
Q  1 cggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacg 69  Q
    ||||||||||||||||||||||||||||||||| | ||| ||||| |||||||||||||||||||||||    
T  603680 cggcttgctgggcaagttttcaggataaggttgatcgtatcttggatcgtacgcaccaaacgtgtcacg 603612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 5413891 - 5413812
Alignment:
Q  2 ggcttgctgggcaag-ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaa 80  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||| |||| ||||||| |||||||    
T  5413891 ggcttgctgggcaagattttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgattggggaaaa 5413812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 26954730 - 26954651
Alignment:
Q  17 ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttga 96  Q
    ||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||| || |||| ||||||||| ||||    
T  26954730 ttttcaggataaggttggtcgtaccttgggtcgtacgcatcaaccgtgtcacgattttgggaaacatgacacgatcttga 26954651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 81 - 165
Target Start/End: Original strand, 5571945 - 5572029
Alignment:
Q  81 cgtgacacgattttgatagctgaagactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgg 165  Q
    |||||||||||||||| | |||||||||||||||||||||||||| || || ||||||||||||||||  ||||||||||||||||    
T  5571945 cgtgacacgattttgacaactgaagactgctatataagtgttcttgtggagtttttgaaggagagctt-tagagagagaaacttgg 5572029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 81 - 165
Target Start/End: Complemental strand, 23896748 - 23896663
Alignment:
Q  81 cgtgacacgattttgatagctgaagactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgg 165  Q
    |||| |||||||||   ||||||||||||||||||||| |||||| |||| ||||||||| |||||||||||||||||||||||||    
T  23896748 cgtggcacgattttatcagctgaagactgctatataagagttcttgtgcatattttgaagaagagcttgaagagagagaaacttgg 23896663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 24714845 - 24714730
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctga 103  Q
    ||||||||||| |||||||||||||| ||||| ||||  |||||| ||||  |||| ||||||||||| |||  || |||||||| |||||||  ||||     
T  24714845 cttgctgggcacgttttcaggataagattggtcgtactgtgggtcatacgatccaaccgtgtcacgatatggccaatcgtgacacaattttgactgctgg 24714746  T
Q  104 agactgctatataagt 119  Q
    ||||||||||||||||    
T  24714745 agactgctatataagt 24714730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 5571888 - 5571957
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgattt 73  Q
    ||||||||||| ||||| ||| |||||||||| ||||||||||||||||||||||| |||| ||||||||    
T  5571888 cttgctgggcacgtttttaggttaaggttggtcgtaccttgggtcgtacgcaccaatcgtgacacgattt 5571957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 2171860 - 2171799
Alignment:
Q  115 taagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaagg 176  Q
    ||||||||||| ||||||||| ||||| ||||| |||||||||||||||||||||||||||||    
T  2171860 taagtgttcttgtgcagattt-gaaggtgagctagaagagagagaaacttgggaaatcaaagg 2171799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 3039219 - 3039155
Alignment:
Q  140 gagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||||||| |||||||| ||||||||||| |||||||||||||  |||||||||||||| ||||||    
T  3039219 gagagcttcaagagagaaaaacttgggaa-tcaaaggaggtaactttagggttgagggtctttgat 3039155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 23896805 - 23896736
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgattt 73  Q
    ||||||||  |||||||||||||||||||||| ||||||| ||||||||| | ||| |||| ||||||||    
T  23896805 cttgctggttaagttttcaggataaggttggtcgtaccttcggtcgtacgtatcaatcgtggcacgattt 23896736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 26954589 - 26954524
Alignment:
Q  140 gagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||||||| |||||||  |||||||||||||||||||||||||  ||||||||||| || ||||||    
T  26954589 gagagcttcaagagaggaaaacttgggaaatcaaaggaggtaactttagggttgagagtctttgat 26954524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 195
Target Start/End: Complemental strand, 31936942 - 31936857
Alignment:
Q  110 ctatataagtgtt-ctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    ||||||||||||| ||||||||||||||||| |||| ||  |||||||||||||| |||   ||||||||||||  |||||||||||    
T  31936942 ctatataagtgtttctttgcagattttgaagtagaggttttagagagagaaactt-ggattgcaaaggaggtaactttagggttgag 31936857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 207
Target Start/End: Complemental strand, 30684210 - 30684143
Alignment:
Q  140 gagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgatga 207  Q
    |||||||| ||||||||||||||||| ||||||||  | ||||  |||||||||||  ||||||||||    
T  30684210 gagagcttcaagagagagaaacttggtaaatcaaatcaagtaactttagggttgagcatatttgatga 30684143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 205
Target Start/End: Original strand, 16567070 - 16567135
Alignment:
Q  140 gagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||| ||| |||||||  ||||||||||||||||||||| |||  |||||||| ||||| ||||||    
T  16567070 gagaacttcaagagaggaaaacttgggaaatcaaaggagttaactttagggttaagggtctttgat 16567135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 28137712 - 28137647
Alignment:
Q  140 gagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||| ||| |||||||  |||||||| |||||||||||| |||  |||||||||||||| ||||||    
T  28137712 gagaacttcaagagaggaaaacttggaaaatcaaaggagttaactttagggttgagggtctttgat 28137647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 176
Target Start/End: Complemental strand, 6097797 - 6097702
Alignment:
Q  81 cgtgacacgattttgatagctgaagactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaagg 176  Q
    ||||||||||||||   ||  |||||||  ||| ||||||||||| ||||||||| ||||| |||   | |||||||||||||||||||||||||||    
T  6097797 cgtgacacgattttatcaggggaagactagtatttaagtgttcttgtgcagattt-gaaggtgagagagtagagagagaaacttgggaaatcaaagg 6097702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 17759462 - 17759494
Alignment:
Q  1 cggcttgctgggcaagttttcaggataaggttg 33  Q
    ||||||||||| |||||||||||||||||||||    
T  17759462 cggcttgctggacaagttttcaggataaggttg 17759494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 118; Significance: 2e-60; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 4 - 160
Target Start/End: Complemental strand, 2966 - 2809
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctga 103  Q
    ||||||||| | |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||| | ||||||    
T  2966 cttgctgggtatgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttggacaaacgtgacacgattttaacagctga 2867  T
Q  104 agactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaa 160  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  2866 agactgctatataagtgttcttgtgcagattttgaaggagagcttgaagagagagaaa 2809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 4 - 165
Target Start/End: Complemental strand, 6158 - 5996
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctga 103  Q
    ||||||||| | |||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||  ||||||||||||||||||| ||||||    
T  6158 cttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacaatttggacaaacgtgacacgattttgacagctga 6059  T
Q  104 agactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgg 165  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  6058 agactgctatataaatgttcttgtgcagattttgaaggagagcttgaagagagagaaaattgg 5996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 4 - 165
Target Start/End: Original strand, 132904 - 133065
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctga 103  Q
    ||||||||  |||||||||||||||||||||| ||||||||||||||||| | ||| |||| |||||||| |||||||||| |||||||||   ||||||    
T  132904 cttgctggttaagttttcaggataaggttggtcgtaccttgggtcgtacgtatcaatcgtgacacgattt-ggaaaacgtggcacgattttatcagctga 133002  T
Q  104 agactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgg 165  Q
    |||||||||||||||||||||| |||| |||||| |||||||||| |||||||||||||||||    
T  133003 agactgctatataagtgttcttgtgcaaattttggaggagagcttaaagagagagaaacttgg 133065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 2 - 205
Target Start/End: Original strand, 434258 - 434462
Alignment:
Q  2 ggcttgctgggcaag-ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaa-cgtgacacgattttgatag 99  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||  || |||| ||||||| ||||||| |||| |||||||||||  |    
T  434258 ggcttgctgggcaagattttcaggataaggttggtcgtaccttggatcgtacgcataaatcgtggcacgattggggaaaaacgtggcacgattttgac-g 434356  T
Q  100 ctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggta 199  Q
    | |||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||  |||||||| |||||     
T  434357 cagaagaccgctataaaagtgttctttgcagattttgaaggtgagcttgaagagagagaaacttgggaaatcaaaggaagcaactttagggtttagggtc 434456  T
Q  200 tttgat 205  Q
    ||||||    
T  434457 tttgat 434462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 105; Significance: 1e-52; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 4 - 195
Target Start/End: Original strand, 36457 - 36647
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctga 103  Q
    ||||||||| | |||||||||||||||||||| ||||||||||||||||||||||| | || |||||||| |||||||||| |||||||||   ||||||    
T  36457 cttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcatggcacgattt-ggaaaacgtggcacgattttatcagctga 36555  T
Q  104 agactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||   ||||||||||||  |||||||||||    
T  36556 agactgctataaaagtgttcttgtgcagattttgaaggagagcttgaagagagagaaactt-ggattacaaaggaggtaactttagggttgag 36647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 4 - 195
Target Start/End: Original strand, 43586 - 43776
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctga 103  Q
    ||||||||  |||||||||||||||||||||| ||||||||||||||| | | ||| |||| |||||||| |||||||||| |||||||||   ||||||    
T  43586 cttgctggttaagttttcaggataaggttggtcgtaccttgggtcgtatgtatcaatcgtggcacgattt-ggaaaacgtggcacgattttatcagctga 43684  T
Q  104 agactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    | ||||||||||||||||| || ||||||||||| ||||||||| |||||||||||||||| |||   ||||||||||||  |||||||||||    
T  43685 atactgctatataagtgtttttgtgcagattttggaggagagctggaagagagagaaactt-ggattacaaaggaggtaactttagggttgag 43776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 2 - 205
Target Start/End: Original strand, 114311 - 114519
Alignment:
Q  2 ggcttgctgggcaag-ttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttg-ggaaaacgtgacacgattttgatag 99  Q
    ||||||||||||||  ||||||||||||||||||| ||||||||||||||||||| ||  |||| |||||||   ||||||||||||||||||| ||| |    
T  114311 ggcttgctgggcaaaattttcaggataaggttggtggtaccttgggtcgtacgcatcactcgtgacacgattgatggaaaacgtgacacgatttcgat-g 114409  T
Q  100 ctgaagactgctatataagtgtt----ctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgag 195  Q
    |||||| ||||||||||||||||    |||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||  |||||||||||    
T  114410 ctgaaggctgctatataagtgttagatctttgcagattttgaatgtgagcttgaagagagagaaacttgagaaatcaaaggaggtaactttagggttgag 114509  T
Q  196 ggtatttgat 205  Q
    ||| ||||||    
T  114510 ggtctttgat 114519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 80944 - 80850
Alignment:
Q  1 cggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttg 95  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  80944 cggcttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgacacgattttg 80850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 79; Significance: 4e-37; HSPs: 2)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 11069 - 11159
Alignment:
Q  5 ttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttg 95  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  11069 ttgctgggcaagttttcaggataaggttggtcgtacattgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgacacgattttg 11159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 22183 - 22244
Alignment:
Q  115 taagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaagg 176  Q
    ||||||||||| ||||||||| ||||| ||||| |||||||||||||||||||||||||||||    
T  22183 taagtgttcttgtgcagattt-gaaggtgagctagaagagagagaaacttgggaaatcaaagg 22244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 71 - 195
Target Start/End: Complemental strand, 86089 - 85965
Alignment:
Q  71 tttgggaaaacgtgacacgattttgatagctgaagactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaa 169  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||| |||      
T  86089 tttgggaaaacgtgacacgattttgacaactgaagactgctatataagtgttcttgtgcagattttgaaggatagcttgaagtgagagaaactt-ggatt 85991  T
Q  170 tcaaaggaggtaatgttagggttgag 195  Q
     ||||||||||||  |||||||||||    
T  85990 acaaaggaggtaactttagggttgag 85965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 4 - 194
Target Start/End: Complemental strand, 45671 - 45482
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctga 103  Q
    ||||||||  |||||||||||||||||||||| ||||||||||||||||  | ||| |||| |||||||| |||||||||| |||||||||   ||||||    
T  45671 cttgctggctaagttttcaggataaggttggtcgtaccttgggtcgtacatatcaatcgtgacacgattt-ggaaaacgtggcacgattttatcagctga 45573  T
Q  104 agactgctatataagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaatgttagggttga 194  Q
    ||| || ||| ||||||||||| |||| |||||| |  ||||||||||||||||||||||| |||   ||||||||||||  ||||||||||    
T  45572 agattggtatttaagtgttcttgtgcaaattttggaaaagagcttgaagagagagaaactt-ggattacaaaggaggtaactttagggttga 45482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 6849 - 6929
Alignment:
Q  16 gttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttg-ggaaaacgtgacacgattttg 95  Q
    |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||| |||||||||    
T  6849 gttttcaggataaggttggttgtaccttgggtcgtacgcaccaaccatgtcacgatttgtggaaaacgtgatacgattttg 6929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 14 - 165
Target Start/End: Original strand, 8052 - 8203
Alignment:
Q  14 aagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctat 113  Q
    |||||||||||||||||||||| ||||||||||||||||| | ||| |||| |||||||| | ||| |||| || ||||||   |||||||||||| |||    
T  8052 aagttttcaggataaggttggtcgtaccttgggtcgtacgtatcaatcgtgacacgattt-gaaaatcgtggcatgattttatcagctgaagactggtat 8150  T
Q  114 ataagtgttc-tttgcagattttgaaggagagcttgaagagagagaaacttgg 165  Q
     ||||||||| | ||||| ||| | ||||||||| ||||||||||||||||||    
T  8151 ttaagtgttcgtgtgcagttttcggaggagagctggaagagagagaaacttgg 8203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 176
Target Start/End: Complemental strand, 11573 - 11430
Alignment:
Q  32 tggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatataagtgttctt-tgcag 130  Q
    |||| |||||||||| |||||||||||| |||| |||||| ||| ||| ||||||||||||||   ||  |||| ||  ||| ||||||||||| |||||    
T  11573 tggtcgtaccttgggacgtacgcaccaatcgtgacacgatctgg-aaatcgtgacacgattttatcagtggaaggctagtatttaagtgttcttgtgcag 11475  T
Q  131 attttgaaggagagcttgaagagagagaaacttgggaaatcaaagg 176  Q
    ||||||||| |||| | |||||||||||||||||||||||||||||    
T  11474 attttgaag-agagttggaagagagagaaacttgggaaatcaaagg 11430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 9065 - 9004
Alignment:
Q  115 taagtgttctt-tgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaagg 176  Q
    ||||||||||| |||||||||||||| |||| | |||||||||||||||||||||||||||||    
T  9065 taagtgttcttgtgcagattttgaag-agagttggaagagagagaaacttgggaaatcaaagg 9004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 78 - 165
Target Start/End: Complemental strand, 17650 - 17562
Alignment:
Q  78 aaacgtgacacgattttgatagctgaagactgctatataagtgttctttgcagattttgaaggagagcttg-aagagagagaaacttgg 165  Q
    ||||||| ||||||||||| ||||||| |||||||||||||||||||||| ||||||||||| | |||||| ||||||||||| |||||    
T  17650 aaacgtgtcacgattttgacagctgaaaactgctatataagtgttctttgtagattttgaagtatagcttgaaagagagagaaccttgg 17562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 17706 - 17635
Alignment:
Q  2 ggcttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgattt 73  Q
    ||||||||||||||| ||||| |||||||||||| ||||| || ||||||||||||||||||||||||||||    
T  17706 ggcttgctgggcaagctttcatgataaggttggtcgtaccctgagtcgtacgcaccaaacgtgtcacgattt 17635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 205
Target Start/End: Original strand, 663 - 846
Alignment:
Q  32 tggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttgatagctgaagactgctatataagtgttctt-tgcag 130  Q
    |||| |||||||| | |||||| |||||  ||| |||||||||| ||| ||||||||||||||   ||  |||||||  ||| ||||||||||| |||||    
T  663 tggtcgtaccttgtgacgtacgtaccaattgtgacacgatttgg-aaatcgtgacacgattttatcagtggaagactagtatttaagtgttcttgtgcag 761  T
Q  131 attttgaaggagagctt----------gaagagagagaaacttgggaaatcaaaggaggtaatgttagggttgagggtatttgat 205  Q
    |||||| ||||||||||          |||||||||||||||||||||||||||||  | ||  |||||||| ||||| ||||||    
T  762 attttggaggagagcttggatgagctagaagagagagaaacttgggaaatcaaaggcagcaactttagggtttagggtctttgat 846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 1235 - 1284
Alignment:
Q  4 cttgctgggcaagttttcaggataaggttggttgtaccttgggtcgtacg 53  Q
    ||||||||  |||||||||||||||||||||| ||||||| |||||||||    
T  1235 cttgctggttaagttttcaggataaggttggtcgtaccttcggtcgtacg 1284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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