View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7401_low_8 (Length: 439)
Name: NF7401_low_8
Description: NF7401
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7401_low_8 |
 |  |
|
| [»] scaffold0045 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr3 (Bit Score: 170; Significance: 4e-91; HSPs: 10)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 241 - 422
Target Start/End: Original strand, 4271694 - 4271875
Alignment:
| Q |
241 |
aagattgcgaggaagatttgaagggtctcacgaaaagtgaggttactgtgattgacacaagttgtcgagtgtggaaggttgataaatttgttttcagaaa |
340 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4271694 |
aagattgcgaggaagatttgaagggtttcacgaaaagtgaggttactgtgattgacacaagttgtcgagtgtggaaggttgataaatttgttttcagaaa |
4271793 |
T |
 |
| Q |
341 |
gaataattggaaaataagagagaggaaacaaaagaacaagtttgttgcgaagaagaagagtaaattgactcatgagcttgat |
422 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
4271794 |
gaatgattggaaaataagagagaggaaacaaaagaacaagtttgttgcgaagaagaagagtaaattgactcgtgagcttgat |
4271875 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 249 - 421
Target Start/End: Original strand, 42346596 - 42346771
Alignment:
| Q |
249 |
gaggaagatttgaagggtctcacgaaaagtgaggttactgtgattgacacaagttgtcgagtgtggaaggttgataaatttgttttcagaaagaataa-- |
346 |
Q |
| |
|
||||||||||| |||||| ||||||||||||||||||||||||| ||||| ||||||| ||||||||| |||||||| ||||| ||||||| |||||| |
|
|
| T |
42346596 |
gaggaagatttcaagggtttcacgaaaagtgaggttactgtgatagacacgagttgtccagtgtggaaagttgataagtttgtgttcagaaggaataatg |
42346695 |
T |
 |
| Q |
347 |
-ttggaaaataagagagaggaaacaaaagaacaagtttgttgcgaagaagaagagtaaattgactcatgagcttga |
421 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||| |
|
|
| T |
42346696 |
tttggaaaatcagagagaggaaacaaaagaacaagtttgtagcgaagaagaagagtaaatcgacccatgagcttga |
42346771 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 89 - 153
Target Start/End: Original strand, 4271538 - 4271603
Alignment:
| Q |
89 |
tttgcaactttgattctttttgttaattttgacaggtcaatg-ctacatgacacgccacatgtgta |
153 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||| |||||||| ||| ||||||||||||||||||| |
|
|
| T |
4271538 |
tttgcaactttgatcctttttgtcaattttgaccggtcaatgtctatatgacacgccacatgtgta |
4271603 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 4271443 - 4271494
Alignment:
| Q |
28 |
taaattgcacttttccacctttaactttcaaaaatttgtaattttgacctct |
79 |
Q |
| |
|
||||||| ||||||| | ||||||||||||||||||||||||||||| |||| |
|
|
| T |
4271443 |
taaattgtacttttctatctttaactttcaaaaatttgtaattttgatctct |
4271494 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 54540793 - 54540751
Alignment:
| Q |
89 |
tttgcaactttgattctttttgttaattttgacaggtcaatgc |
131 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||| ||||||||| |
|
|
| T |
54540793 |
tttgcaactttgatcctttttgtcaattttgaccggtcaatgc |
54540751 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 47610681 - 47610633
Alignment:
| Q |
25 |
ggttaaattgcacttttccacctttaactttcaaaaatttgtaattttg |
73 |
Q |
| |
|
||||||| ||||||||||| ||| ||||||||||||| ||| ||||||| |
|
|
| T |
47610681 |
ggttaaagtgcacttttccccctctaactttcaaaaacttgcaattttg |
47610633 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 51038888 - 51038840
Alignment:
| Q |
28 |
taaattgcacttttccacctttaactttcaaaaatttgtaattttgacc |
76 |
Q |
| |
|
|||| |||||||||||||| |||||||| ||||| ||| |||||||||| |
|
|
| T |
51038888 |
taaagtgcacttttccacccttaacttttaaaaagttgcaattttgacc |
51038840 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 52839040 - 52839088
Alignment:
| Q |
28 |
taaattgcacttttccacctttaactttcaaaaatttgtaattttgacc |
76 |
Q |
| |
|
|||| |||| |||||| ||| |||||| ||||||||||||||||||||| |
|
|
| T |
52839040 |
taaagtgcaattttccccctctaacttccaaaaatttgtaattttgacc |
52839088 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 54539758 - 54539802
Alignment:
| Q |
28 |
taaattgcacttttccacctttaactttcaaaaatttgtaatttt |
72 |
Q |
| |
|
|||| |||||||||||||| |||||||||||||| ||| |||||| |
|
|
| T |
54539758 |
taaagtgcacttttccacccttaactttcaaaaacttgcaatttt |
54539802 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 54540888 - 54540840
Alignment:
| Q |
28 |
taaattgcacttttccacctttaactttcaaaaatttgtaattttgacc |
76 |
Q |
| |
|
|||| ||||||||||| || |||||||||||||| ||| |||||||||| |
|
|
| T |
54540888 |
taaagtgcacttttccccccttaactttcaaaaacttgcaattttgacc |
54540840 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 33; Significance: 0.000000002; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 12382809 - 12382761
Alignment:
| Q |
28 |
taaattgcacttttccacctttaactttcaaaaatttgtaattttgacc |
76 |
Q |
| |
|
|||| ||||||||||||||| ||| ||| |||||||||||||||||||| |
|
|
| T |
12382809 |
taaagtgcacttttccacctctaatttttaaaaatttgtaattttgacc |
12382761 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 3721615 - 3721663
Alignment:
| Q |
28 |
taaattgcacttttccacctttaactttcaaaaatttgtaattttgacc |
76 |
Q |
| |
|
|||| ||||||||||| ||| ||||||||||||| ||| |||||||||| |
|
|
| T |
3721615 |
taaagtgcacttttccccctctaactttcaaaaacttgcaattttgacc |
3721663 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 8822891 - 8822843
Alignment:
| Q |
28 |
taaattgcacttttccacctttaactttcaaaaatttgtaattttgacc |
76 |
Q |
| |
|
|||| ||||||||||| |||||||||||||||| ||| |||||||||| |
|
|
| T |
8822891 |
taaagtgcacttttccctctttaactttcaaaaacttgcaattttgacc |
8822843 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 16704595 - 16704547
Alignment:
| Q |
28 |
taaattgcacttttccacctttaactttcaaaaatttgtaattttgacc |
76 |
Q |
| |
|
|||| ||||||||||| || |||||||||||||| ||| |||||||||| |
|
|
| T |
16704595 |
taaagtgcacttttcctcccttaactttcaaaaacttgcaattttgacc |
16704547 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 32; Significance: 0.00000001; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 139
Target Start/End: Complemental strand, 18979123 - 18979072
Alignment:
| Q |
89 |
tttgcaactttgattctttttgttaattttgacaggtcaatg-ctacatgac |
139 |
Q |
| |
|
|||||||||||||| ||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
18979123 |
tttgcaactttgatcctttttgccaattttgacaggtcaatgcctacatgac |
18979072 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 42982755 - 42982710
Alignment:
| Q |
28 |
taaattgcacttttccacctttaactttcaaaaatttgtaattttg |
73 |
Q |
| |
|
|||| ||||||||||||||||||| ||| ||||| ||||||||||| |
|
|
| T |
42982755 |
taaagtgcacttttccacctttaagttttaaaaagttgtaattttg |
42982710 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 22221462 - 22221414
Alignment:
| Q |
28 |
taaattgcacttttccacctttaactttcaaaaatttgtaattttgacc |
76 |
Q |
| |
|
|||| |||||||||||||| ||||||||||||| ||| |||||||||| |
|
|
| T |
22221462 |
taaagtgcacttttccacccctaactttcaaaaacttgcaattttgacc |
22221414 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 22227804 - 22227756
Alignment:
| Q |
28 |
taaattgcacttttccacctttaactttcaaaaatttgtaattttgacc |
76 |
Q |
| |
|
|||| |||||||||||||| ||||||||||||| ||| |||||||||| |
|
|
| T |
22227804 |
taaagtgcacttttccacccctaactttcaaaaacttgcaattttgacc |
22227756 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 46483608 - 46483546
Alignment:
| Q |
25 |
ggttaaattgcacttttccacctttaactttcaaaaatttgtaattttga-cctctaagattta |
87 |
Q |
| |
|
||||||| ||||||||||| ||||||||||| ||||| |||||||||||| || |||||||||| |
|
|
| T |
46483608 |
ggttaaagtgcacttttcc-cctttaacttttaaaaacttgtaattttgatcccctaagattta |
46483546 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 48935001 - 48934953
Alignment:
| Q |
28 |
taaattgcacttttccacctttaactttcaaaaatttgtaattttgacc |
76 |
Q |
| |
|
|||| |||| ||||||||| ||||||||||||| |||||||||||||| |
|
|
| T |
48935001 |
taaagtgcatttttccacccctaactttcaaaaacttgtaattttgacc |
48934953 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0045 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0045
Description:
Target: scaffold0045; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 49182 - 49132
Alignment:
| Q |
28 |
taaattgcacttttccacctttaactttcaaaaatttgtaattttgacctc |
78 |
Q |
| |
|
||||||||||||||||||| |||||||| ||||| ||| ||||||| |||| |
|
|
| T |
49182 |
taaattgcacttttccacccttaacttttaaaaacttgcaattttggcctc |
49132 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 31; Significance: 0.00000004; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 36486491 - 36486449
Alignment:
| Q |
89 |
tttgcaactttgattctttttgttaattttgacaggtcaatgc |
131 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||| ||||||||| |
|
|
| T |
36486491 |
tttgcaactttgatcctttttgtcaattttgaccggtcaatgc |
36486449 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 153
Target Start/End: Complemental strand, 1797300 - 1797235
Alignment:
| Q |
89 |
tttgcaactttgattctttttgttaattttgacaggtcaatg-ctacatgacacgccacatgtgta |
153 |
Q |
| |
|
|||||||||||||||| |||| | ||||||||| |||||||| ||| || ||||||||||||||| |
|
|
| T |
1797300 |
tttgcaactttgattccttttttcaattttgaccggtcaatgcctatgtggcacgccacatgtgta |
1797235 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 130
Target Start/End: Original strand, 28538774 - 28538815
Alignment:
| Q |
89 |
tttgcaactttgattctttttgttaattttgacaggtcaatg |
130 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||| |||||||| |
|
|
| T |
28538774 |
tttgcaactttgatcctttttgtcaattttgaccggtcaatg |
28538815 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 16650953 - 16650905
Alignment:
| Q |
28 |
taaattgcacttttccacctttaactttcaaaaatttgtaattttgacc |
76 |
Q |
| |
|
|||| |||||||||||||| |||||||| ||||| ||| |||||||||| |
|
|
| T |
16650953 |
taaagtgcacttttccacccttaacttttaaaaacttgcaattttgacc |
16650905 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 28538679 - 28538727
Alignment:
| Q |
28 |
taaattgcacttttccacctttaactttcaaaaatttgtaattttgacc |
76 |
Q |
| |
|
|||| |||||||||||||| ||||||||||||| ||| |||||||||| |
|
|
| T |
28538679 |
taaagtgcacttttccacccgtaactttcaaaaacttgcaattttgacc |
28538727 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 31; Significance: 0.00000004; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 1289097 - 1289155
Alignment:
| Q |
25 |
ggttaaattgcacttttccacctttaactttcaaaaatttgtaattttga-cctctaag |
82 |
Q |
| |
|
||||||| || |||||||| || |||||||||||| |||||||||||||| |||||||| |
|
|
| T |
1289097 |
ggttaaagtgaacttttccccccttaactttcaaatatttgtaattttgatcctctaag |
1289155 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 31600988 - 31600946
Alignment:
| Q |
89 |
tttgcaactttgattctttttgttaattttgacaggtcaatgc |
131 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||| ||||||||| |
|
|
| T |
31600988 |
tttgcaactttgatcctttttgtcaattttgaccggtcaatgc |
31600946 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 48781143 - 48781098
Alignment:
| Q |
28 |
taaattgcacttttccacctttaactttcaaaaatttgtaattttg |
73 |
Q |
| |
|
|||| ||||||||||| ||| ||||||||||||||||| ||||||| |
|
|
| T |
48781143 |
taaagtgcacttttccccctctaactttcaaaaatttgcaattttg |
48781098 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 8758938 - 8758890
Alignment:
| Q |
25 |
ggttaaattgcacttttccacctttaactttcaaaaatttgtaattttg |
73 |
Q |
| |
|
||||||| ||||||||||| || |||||||||||||| ||| ||||||| |
|
|
| T |
8758938 |
ggttaaaatgcacttttccccccttaactttcaaaaacttgcaattttg |
8758890 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 10470549 - 10470597
Alignment:
| Q |
28 |
taaattgcacttttccacctttaactttcaaaaatttgtaattttgacc |
76 |
Q |
| |
|
|||| ||||||||||| || |||||||||||||| ||| |||||||||| |
|
|
| T |
10470549 |
taaagtgcacttttccccccttaactttcaaaaacttgcaattttgacc |
10470597 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 31; Significance: 0.00000004; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 35594220 - 35594274
Alignment:
| Q |
28 |
taaattgcacttttccacctttaactttcaaaaatttgtaattttgacctctaag |
82 |
Q |
| |
|
|||| |||||||||||||| ||||||||||||| ||| |||||||||| ||||| |
|
|
| T |
35594220 |
taaagtgcacttttccacccctaactttcaaaaacttgcaattttgacccctaag |
35594274 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 11436045 - 11436090
Alignment:
| Q |
28 |
taaattgcacttttccacctttaactttcaaaaatttgtaattttg |
73 |
Q |
| |
|
|||| ||||||||||| ||||||||||||||||| ||| ||||||| |
|
|
| T |
11436045 |
taaagtgcacttttccccctttaactttcaaaaacttgcaattttg |
11436090 |
T |
 |
Back To:
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Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 153
Target Start/End: Complemental strand, 44411969 - 44411904
Alignment:
| Q |
89 |
tttgcaactttgattctttttgttaattttgacaggtcaatg-ctacatgacacgccacatgtgta |
153 |
Q |
| |
|
|||||||||||||| ||||||| ||||||||| |||||||| |||| || |||||||| |||||| |
|
|
| T |
44411969 |
tttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggcacgccacgtgtgta |
44411904 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 91 - 131
Target Start/End: Original strand, 14999381 - 14999421
Alignment:
| Q |
91 |
tgcaactttgattctttttgttaattttgacaggtcaatgc |
131 |
Q |
| |
|
|||||||||||| |||||||| ||||||||| ||||||||| |
|
|
| T |
14999381 |
tgcaactttgatcctttttgtcaattttgaccggtcaatgc |
14999421 |
T |
 |
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Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 52276264 - 52276216
Alignment:
| Q |
25 |
ggttaaattgcacttttccacctttaactttcaaaaatttgtaattttg |
73 |
Q |
| |
|
||||||| |||||||| || | | ||||||||||||||||||||||||| |
|
|
| T |
52276264 |
ggttaaagtgcactttcccccttctaactttcaaaaatttgtaattttg |
52276216 |
T |
 |
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