View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7403_low_3 (Length: 399)

Name: NF7403_low_3
Description: NF7403
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7403_low_3
NF7403_low_3
[»] chr7 (49 HSPs)
chr7 (184-391)||(11685331-11685538)
chr7 (14-314)||(45464683-45464983)
chr7 (8-160)||(11684057-11684209)
chr7 (14-314)||(4321375-4321673)
chr7 (184-317)||(34784308-34784441)
chr7 (8-359)||(38614327-38614669)
chr7 (8-313)||(2168343-2168649)
chr7 (14-314)||(34692250-34692554)
chr7 (14-314)||(48302444-48302744)
chr7 (85-314)||(1547241-1547467)
chr7 (33-318)||(3690440-3690725)
chr7 (205-314)||(30108857-30108966)
chr7 (8-314)||(23954794-23955099)
chr7 (14-175)||(30109024-30109185)
chr7 (8-299)||(46994970-46995261)
chr7 (33-315)||(36756398-36756681)
chr7 (33-315)||(36762195-36762478)
chr7 (243-314)||(19712014-19712085)
chr7 (184-315)||(36766074-36766205)
chr7 (185-299)||(40785216-40785330)
chr7 (184-318)||(46810995-46811129)
chr7 (204-318)||(7403476-7403590)
chr7 (184-312)||(8421712-8421840)
chr7 (292-391)||(19712098-19712197)
chr7 (199-317)||(13036191-13036309)
chr7 (184-318)||(45360929-45361062)
chr7 (184-312)||(35342722-35342850)
chr7 (184-316)||(37791965-37792097)
chr7 (183-317)||(23904917-23905052)
chr7 (184-314)||(6605032-6605162)
chr7 (184-318)||(13169302-13169435)
chr7 (184-318)||(39857999-39858133)
chr7 (184-314)||(47384608-47384738)
chr7 (70-175)||(48705396-48705499)
chr7 (28-113)||(40785079-40785164)
chr7 (184-256)||(48850929-48851001)
chr7 (262-317)||(12904046-12904101)
chr7 (199-317)||(48311427-48311543)
chr7 (228-318)||(3921007-3921096)
chr7 (127-214)||(12903939-12904026)
chr7 (184-314)||(38549845-38549975)
chr7 (185-317)||(22155495-22155626)
chr7 (185-317)||(22211410-22211541)
chr7 (184-316)||(38472573-38472705)
chr7 (186-317)||(34775362-34775493)
chr7 (97-151)||(8421867-8421921)
chr7 (323-369)||(34784243-34784289)
chr7 (250-306)||(27956933-27956988)
chr7 (281-317)||(48227707-48227743)
[»] chr8 (47 HSPs)
chr8 (184-391)||(11031621-11031828)
chr8 (14-314)||(40019448-40019748)
chr8 (106-317)||(25356622-25356834)
chr8 (8-318)||(33369050-33369362)
chr8 (14-305)||(28432520-28432810)
chr8 (8-317)||(9876053-9876361)
chr8 (184-314)||(10269206-10269336)
chr8 (28-318)||(461467-461756)
chr8 (28-314)||(33158951-33159236)
chr8 (184-314)||(9186302-9186432)
chr8 (19-317)||(38881691-38881992)
chr8 (184-314)||(10268093-10268223)
chr8 (84-314)||(44620244-44620472)
chr8 (33-318)||(1321829-1322115)
chr8 (186-318)||(10770636-10770768)
chr8 (212-317)||(25373335-25373440)
chr8 (237-318)||(25705571-25705652)
chr8 (63-318)||(42895061-42895317)
chr8 (184-314)||(15684048-15684178)
chr8 (211-317)||(25402504-25402610)
chr8 (211-317)||(25707013-25707119)
chr8 (184-289)||(12515395-12515499)
chr8 (199-318)||(11719746-11719865)
chr8 (251-318)||(25370798-25370865)
chr8 (8-151)||(33748793-33748935)
chr8 (294-391)||(9186447-9186544)
chr8 (184-317)||(17807313-17807446)
chr8 (8-318)||(31822975-31823276)
chr8 (184-315)||(11790496-11790627)
chr8 (184-318)||(32823938-32824072)
chr8 (30-175)||(25371636-25371781)
chr8 (199-318)||(24527184-24527303)
chr8 (200-318)||(37525149-37525267)
chr8 (184-318)||(41041032-41041166)
chr8 (184-317)||(13484831-13484964)
chr8 (28-113)||(37525333-37525418)
chr8 (106-218)||(8655640-8655752)
chr8 (184-317)||(41824261-41824394)
chr8 (303-391)||(10267998-10268086)
chr8 (184-312)||(31199781-31199909)
chr8 (184-299)||(33748644-33748759)
chr8 (8-61)||(11719994-11720047)
chr8 (184-317)||(22273535-22273668)
chr8 (184-316)||(29693963-29694095)
chr8 (33-80)||(32823816-32823863)
chr8 (8-61)||(11790317-11790370)
chr8 (14-46)||(42895321-42895353)
[»] chr3 (41 HSPs)
chr3 (10-318)||(26448037-26448342)
chr3 (96-316)||(30501391-30501610)
chr3 (110-314)||(40962981-40963184)
chr3 (8-316)||(1847154-1847462)
chr3 (14-314)||(41945600-41945898)
chr3 (20-316)||(32842721-32843017)
chr3 (84-310)||(49494787-49495011)
chr3 (17-318)||(48634872-48635173)
chr3 (29-318)||(24382004-24382293)
chr3 (199-314)||(37865676-37865791)
chr3 (37-299)||(31885827-31886088)
chr3 (184-318)||(2975749-2975883)
chr3 (205-314)||(33051144-33051253)
chr3 (8-216)||(33112233-33112441)
chr3 (14-142)||(37886239-37886367)
chr3 (14-218)||(23775149-23775353)
chr3 (8-318)||(35861831-35862141)
chr3 (8-160)||(45897487-45897640)
chr3 (8-146)||(2975887-2976024)
chr3 (33-318)||(18429030-18429314)
chr3 (33-318)||(45255773-45256058)
chr3 (33-299)||(33851291-33851555)
chr3 (184-317)||(2378576-2378709)
chr3 (184-317)||(42282135-42282268)
chr3 (92-299)||(10380511-10380719)
chr3 (184-318)||(610850-610984)
chr3 (184-314)||(51686013-51686143)
chr3 (184-317)||(17516608-17516741)
chr3 (184-317)||(21350257-21350390)
chr3 (184-317)||(30598658-30598791)
chr3 (186-318)||(44268301-44268432)
chr3 (15-61)||(13466609-13466655)
chr3 (184-318)||(23887489-23887622)
chr3 (184-318)||(27897512-27897646)
chr3 (184-317)||(23875963-23876095)
chr3 (192-317)||(45897342-45897467)
chr3 (323-391)||(30501299-30501367)
chr3 (321-391)||(7589470-7589540)
chr3 (184-318)||(23291889-23292023)
chr3 (8-61)||(22218719-22218772)
chr3 (323-383)||(40963210-40963270)
[»] chr2 (29 HSPs)
chr2 (14-314)||(11021825-11022125)
chr2 (14-314)||(28247674-28247974)
chr2 (184-314)||(363354-363485)
chr2 (25-314)||(11313127-11313402)
chr2 (14-314)||(38149535-38149836)
chr2 (184-314)||(7744932-7745062)
chr2 (9-316)||(10715400-10715690)
chr2 (184-317)||(17948601-17948734)
chr2 (14-318)||(37418263-37418569)
chr2 (8-314)||(35575-35881)
chr2 (191-314)||(2359394-2359516)
chr2 (14-317)||(42880309-42880610)
chr2 (184-318)||(34400628-34400762)
chr2 (184-318)||(42517877-42518011)
chr2 (184-312)||(15373554-15373683)
chr2 (57-217)||(40150664-40150825)
chr2 (106-318)||(40152135-40152346)
chr2 (185-317)||(17697776-17697903)
chr2 (184-318)||(19907036-19907170)
chr2 (33-151)||(42002990-42003108)
chr2 (184-312)||(41708097-41708225)
chr2 (184-298)||(26581316-26581430)
chr2 (237-318)||(16377082-16377163)
chr2 (303-385)||(363509-363585)
chr2 (262-317)||(4047703-4047758)
chr2 (276-317)||(161813-161854)
chr2 (272-317)||(2359542-2359587)
chr2 (184-256)||(14387765-14387837)
chr2 (184-312)||(31474719-31474847)
[»] chr1 (27 HSPs)
chr1 (14-314)||(5784366-5784666)
chr1 (8-317)||(42558248-42558546)
chr1 (84-314)||(51123115-51123342)
chr1 (14-314)||(11152837-11153136)
chr1 (184-301)||(25172701-25172818)
chr1 (8-318)||(31803190-31803500)
chr1 (8-318)||(46637056-46637365)
chr1 (33-318)||(45379374-45379658)
chr1 (33-312)||(44158807-44159088)
chr1 (33-318)||(42135761-42136045)
chr1 (186-318)||(6576774-6576906)
chr1 (8-151)||(18183063-18183205)
chr1 (33-318)||(35478378-35478660)
chr1 (184-318)||(50554500-50554634)
chr1 (187-318)||(33679549-33679680)
chr1 (184-318)||(31237139-31237273)
chr1 (184-317)||(18058121-18058254)
chr1 (184-314)||(15105986-15106116)
chr1 (184-317)||(6817200-6817333)
chr1 (185-267)||(18180818-18180900)
chr1 (184-317)||(45045232-45045365)
chr1 (184-299)||(27952167-27952282)
chr1 (184-318)||(2870712-2870845)
chr1 (184-318)||(3012175-3012309)
chr1 (33-151)||(33679696-33679814)
chr1 (323-391)||(25172876-25172944)
chr1 (276-314)||(33599542-33599580)
[»] chr4 (36 HSPs)
chr4 (14-314)||(39922506-39922806)
chr4 (14-314)||(39084651-39084951)
chr4 (14-314)||(39190318-39190618)
chr4 (14-314)||(42879576-42879876)
chr4 (14-314)||(43778681-43778979)
chr4 (14-314)||(5485551-5485851)
chr4 (15-314)||(44993100-44993399)
chr4 (184-313)||(13438146-13438275)
chr4 (14-314)||(32653130-32653430)
chr4 (118-303)||(25994708-25994897)
chr4 (184-314)||(230740-230869)
chr4 (8-318)||(4519959-4520270)
chr4 (33-299)||(44556917-44557183)
chr4 (185-257)||(39294553-39294625)
chr4 (34-318)||(27626246-27626530)
chr4 (28-317)||(51041027-51041314)
chr4 (204-316)||(28100865-28100977)
chr4 (184-316)||(13449984-13450107)
chr4 (184-318)||(2691684-2691818)
chr4 (184-317)||(20820290-20820423)
chr4 (40-318)||(35997284-35997568)
chr4 (291-367)||(39294645-39294721)
chr4 (184-312)||(47942413-47942541)
chr4 (184-317)||(54387537-54387670)
chr4 (15-122)||(10544498-10544605)
chr4 (184-299)||(44793243-44793358)
chr4 (184-318)||(11254378-11254512)
chr4 (227-312)||(10544693-10544778)
chr4 (237-318)||(26397635-26397715)
chr4 (184-317)||(49524394-49524527)
chr4 (184-318)||(35402069-35402202)
chr4 (8-48)||(27385940-27385980)
chr4 (291-369)||(230650-230728)
chr4 (8-169)||(28101018-28101179)
chr4 (280-317)||(42982211-42982248)
chr4 (281-317)||(20494146-20494182)
[»] chr6 (12 HSPs)
chr6 (14-314)||(17950853-17951152)
chr6 (14-314)||(35174674-35174974)
chr6 (20-316)||(17936042-17936339)
chr6 (14-314)||(34344824-34345123)
chr6 (186-314)||(4289710-4289838)
chr6 (192-365)||(31210129-31210313)
chr6 (184-318)||(33277101-33277234)
chr6 (184-317)||(7371453-7371586)
chr6 (192-316)||(30639903-30640027)
chr6 (199-318)||(11356803-11356922)
chr6 (237-314)||(33267342-33267419)
chr6 (228-304)||(14337985-14338061)
[»] chr5 (32 HSPs)
chr5 (184-318)||(1344478-1344612)
chr5 (14-314)||(42619581-42619875)
chr5 (189-391)||(24497749-24497969)
chr5 (8-318)||(18726853-18727164)
chr5 (16-318)||(38176923-38177225)
chr5 (16-318)||(38204147-38204449)
chr5 (8-314)||(35291343-35291644)
chr5 (8-299)||(40330004-40330296)
chr5 (8-318)||(32089411-32089725)
chr5 (184-316)||(1343482-1343614)
chr5 (84-314)||(27350095-27350322)
chr5 (8-161)||(43317176-43317329)
chr5 (14-299)||(32836186-32836470)
chr5 (84-318)||(6116465-6116700)
chr5 (8-160)||(18341593-18341745)
chr5 (184-318)||(18623765-18623899)
chr5 (184-318)||(32134556-32134690)
chr5 (36-299)||(35400226-35400489)
chr5 (184-317)||(34328466-34328600)
chr5 (184-317)||(12738337-12738470)
chr5 (184-317)||(12801160-12801293)
chr5 (184-317)||(27077123-27077256)
chr5 (184-317)||(33257426-33257559)
chr5 (8-55)||(33257262-33257309)
chr5 (187-305)||(41494167-41494285)
chr5 (237-318)||(30464263-30464344)
chr5 (237-317)||(28035772-28035852)
chr5 (14-61)||(27076963-27077010)
chr5 (228-318)||(28821770-28821860)
chr5 (280-314)||(29620495-29620529)
chr5 (280-316)||(8541036-8541072)
chr5 (237-317)||(19998149-19998229)
[»] scaffold0006 (1 HSPs)
scaffold0006 (84-312)||(37856-38082)
[»] scaffold0070 (1 HSPs)
scaffold0070 (97-318)||(57669-57890)
[»] scaffold1041 (2 HSPs)
scaffold1041 (251-318)||(2643-2710)
scaffold1041 (251-318)||(2356-2423)
[»] scaffold0722 (1 HSPs)
scaffold0722 (189-318)||(4446-4574)
[»] scaffold0564 (1 HSPs)
scaffold0564 (184-317)||(9533-9666)
[»] scaffold0345 (1 HSPs)
scaffold0345 (199-318)||(1164-1283)


Alignment Details
Target: chr7 (Bit Score: 160; Significance: 4e-85; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 184 - 391
Target Start/End: Original strand, 11685331 - 11685538
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||    
T  11685331 attaggttttgaagctttttgaattggtgaagaacgttacctctaattattgaaagaaattttggagattttggagtgtagattacagattgtaaaatta 11685430  T
Q  284 gggttccaattttatatatttgaggaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaattttggtcactgtcgaccacattag 383  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||    
T  11685431 gggttccaattttatatatttgggggagaaagagcaaagcattttctacaaatcaatcaatttgatccttggaaattttggtcgctatcgaccacattag 11685530  T
Q  384 tctctgct 391  Q
    || |||||    
T  11685531 tccctgct 11685538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 14 - 314
Target Start/End: Original strand, 45464683 - 45464983
Alignment:
Q  14 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 113  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||| | ||||||||    
T  45464683 caacattcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacctcccatcattt 45464782  T
Q  114 cagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattgggga 213  Q
     |||||||| || |||| | |||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| |||||||    
T  45464783 tagattcaatttcaacagtattgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgtaattttttgatttgggga 45464882  T
Q  214 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaa 313  Q
    ||||||| |||  |||||||||||||||| |||||  |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  45464883 agaacgtgacccttaattattgaaagaaaatttggagattttggagtgtagattacacattgtaaaattagagttccaattttatatatttgaggaagaa 45464982  T
Q  314 a 314  Q
    |    
T  45464983 a 45464983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 8 - 160
Target Start/End: Original strand, 11684057 - 11684209
Alignment:
Q  8 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgc-ttttgcccttacacccacccctc 106  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||| |||||||||    
T  11684057 ggacaccaacattcaagtactctcacatcaccattaaacatggagcttaaagatgaagctcgactttcataattgctttttgcccttaca-ccacccctc 11684155  T
Q  107 atcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttg 160  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  11684156 atcatttcggattcaaattgaacaattttgcttgaagaaattttggggattttg 11684209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 14 - 314
Target Start/End: Complemental strand, 4321673 - 4321375
Alignment:
Q  14 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 113  Q
    |||||||||||||||||||||||| ||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||||| ||||||||    
T  4321673 caacattcaagcactctcacatcaacattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacccc-catcattt 4321575  T
Q  114 cagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattgggga 213  Q
     |||||||| || || | |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| |||||||    
T  4321574 tagattcaatttcaatagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaa-attagggtttgcaattttttgatttgggga 4321476  T
Q  214 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaa 313  Q
    ||||||| |||  ||||||||| |||||| ||| |  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||    
T  4321475 agaacgtgacccttaattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaa 4321376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 184 - 317
Target Start/End: Complemental strand, 34784441 - 34784308
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||| | |||||||||  |||||||||||||||||| | ||||||||||||    
T  34784441 attagggtttggagttttttgaattggggaagaacgttaccactaattattgacataaattttggagattttggagtgtagattaaagattgtaaaatta 34784342  T
Q  284 gggttccaattttatatatttgaggaagaaagag 317  Q
    |||||||||||||||||||||| |||||||||||    
T  34784341 gggttccaattttatatatttggggaagaaagag 34784308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 8 - 359
Target Start/End: Original strand, 38614327 - 38614669
Alignment:
Q  8 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 107  Q
    ||||| ||||||| |||||||||||||||||||||| || |||||||| ||||| ||||| ||||||||||| || |||| ||| ||  |||||||| ||    
T  38614327 ggacaccaacatttaagcactctcacatcaccattagacttggagcttgaagatgaagctcgactttcataactgttttttcccatattcccacccc-ca 38614425  T
Q  108 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaat 207  Q
    ||||||||||||||| || || | |||||||| |||||||||||  |||||||  |||| ||||||||        |||||||||||||| |||||||||    
T  38614426 tcatttcagattcaatttcaatagttttgcttcaagaaattttgaggattttggctttcagattcaatacgaaaaaattagggtttgaagttttttgaat 38614525  T
Q  208 tggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgag 307  Q
     || |||||||   |||||| ||||||| | ||||||||||  ||||       |||||| || |||||  ||||||| ||||||||||||| |  || |    
T  38614526 cggagaagaactggaccacttattattggaggaaattttggtgattt-------tagattgcagattgtgtaattaggattccaattttatacagctggg 38614618  T
Q  308 gaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaat 359  Q
    ||||||||  |||| |||||||| ||||||||| |||||  ||||| |||||    
T  38614619 gaagaaag-ccaaaacattttctgcaaatcaatcaatttagtcctttgaaat 38614669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 8 - 313
Target Start/End: Original strand, 2168343 - 2168649
Alignment:
Q  8 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttg--cccttacacccacccct 105  Q
    ||||| |||||||  |||||||| ||||||||||||||| |||||||| ||||||||||| ||||||||||| |  ||||   ||| ||  ||||||||     
T  2168343 ggacaccaacatttgagcactctgacatcaccattaaacttggagcttgaagataaagctcgactttcataactattttttttcccatattcccacccc- 2168441  T
Q  106 catcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttga 205  Q
    |||||||| |||||||| || || | |||||||| |||||||||||  |||||||  |||| ||||||||        |||||||||||||| |||||||    
T  2168442 catcattttagattcaatttcaatagttttgcttcaagaaattttgaggattttggctttcagattcaatacgaaaaaattagggtttgaagttttttga 2168541  T
Q  206 attggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttg 305  Q
    ||||| |||||||   || ||| ||||||| | ||||||||||  ||||| ||||||||||| || |||||  |||||||||| |||||||||| | |||    
T  2168542 attggagaagaactggactacttattattggaggaaattttggtgattttagagtgtagattgcagattgtgtaattagggttacaattttatacaattg 2168641  T
Q  306 aggaagaa 313  Q
     |||||||    
T  2168642 gggaagaa 2168649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 14 - 314
Target Start/End: Original strand, 34692250 - 34692554
Alignment:
Q  14 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 113  Q
    ||||||||||||| ||||||||||| |||||||||| ||  | ||||| |||||||||||| |||  |  |||||||| ||   | ||||| ||||||||    
T  34692250 caacattcaagcattctcacatcactattaaacatgtaggatgaagatgaagcttgactttgatagctctttttgcccatatgactacccc-catcattt 34692348  T
Q  114 cagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta----ttag-ggtttgaagctttttgaatt 208  Q
     |||||||| || || | |||||||||||  |||||||  |||||||  |||| ||||||||        |    |||| |||||| |  ||||||| ||    
T  34692349 tagattcaatttcaatagttttgcttgaatgaattttgcagattttggttttcagattcaataaaaaaaaaaaaattagtggtttggaattttttgattt 34692448  T
Q  209 ggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgagg 308  Q
    |||||||||||| |||||||||||||| |||||| |||||  |||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||    
T  34692449 ggggaagaacgtgaccactaattattggaagaaaatttggagattttggagtgtagattaaacattgtaaaattagggttccaattttatatatttgggg 34692548  T
Q  309 aagaaa 314  Q
    ||||||    
T  34692549 aagaaa 34692554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 14 - 314
Target Start/End: Complemental strand, 48302744 - 48302444
Alignment:
Q  14 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 113  Q
    ||||||||||||||||||||||||||||||||||||||   | ||||| || ||||||||| |||  |  |||||||| ||   |||||||  |||||||    
T  48302744 caacattcaagcactctcacatcaccattaaacatggaagatgaagatgaaacttgactttgatagctctttttgcccatatgaccacccccaatcattt 48302645  T
Q  114 cagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattgggga 213  Q
      | ||||| || |||| |||||||||||  |||||||  |||||||  ||||  |||||||        ||||||||||| |  ||||||| |||||||    
T  48302644 ttgtttcaatttcaacagttttgcttgaatgaattttgaagattttggttttcatattcaattaaaaaaaattagggtttgcaattttttgatttgggga 48302545  T
Q  214 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaa 313  Q
    ||||||| ||   ||||||||| ||| || |||||  ||||||||||||||| |||| ||||||||||||| ||| |||||||||||||||| |||||||    
T  48302544 agaacgtgactcttaattattggaagcaaatttggagattttggagtgtagaatacacattgtaaaattagagtttcaattttatatatttggggaagaa 48302445  T
Q  314 a 314  Q
    |    
T  48302444 a 48302444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 85 - 314
Target Start/End: Original strand, 1547241 - 1547467
Alignment:
Q  85 tttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttga-atttcggattcaatnnnnnnnt 183  Q
    ||||||| |||||||||||| |||||||||  |||||| |  |||| ||||| |||||| |||||||| ||||||   |||||| |||||||            
T  1547241 tttgcccatacacccacccc-catcatttcgtattcaattacaacagttttgtttgaaggaattttggggatttttttatttcgaattcaatcaaaaa-- 1547337  T
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||||| | | ||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||| | ||||||||||||    
T  1547338 attagggtttgaggttatttcaatcggggaagaacgttaccactaattattgaaagaa-ttttgggaattttagagtgtggattaaagattgtaaaatta 1547436  T
Q  284 gggttccaattttatatatttgaggaagaaa 314  Q
    ||||| |||||||||| ||||| ||||||||    
T  1547437 gggtttcaattttatacatttggggaagaaa 1547467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 33 - 318
Target Start/End: Complemental strand, 3690725 - 3690440
Alignment:
Q  33 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 132  Q
    |||||||| ||||| |||||||| ||||| |||||||||||||||||    |||| ||| ||  ||||||||   ||||||||||||||| || || | |    
T  3690725 catcaccactaaacttggagcttgaagatgaagcttgactttcataacaattttttcccatattcccaccccatttcatttcagattcaatttcaatagt 3690626  T
Q  133 tttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaatta 232  Q
    ||||||| |||||||||||  |||||||  |||| ||||||||        |||||||||| ||| ||||||||||||||||||||   |||||| ||||    
T  3690625 tttgcttcaagaaattttgtggattttggctttcagattcaatacgaaaaaattagggtttcaagttttttgaattggggaagaactggaccacttatta 3690526  T
Q  233 ttgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 318  Q
    ||| | ||||||| ||  ||||| || |||||||| || |||||  ||||||||||||||||||||| | ||| |||||| |||||    
T  3690525 ttggaggaaatttaggtgattttagaatgtagattgcaaattgtgtaattagggttccaattttatacaattggggaagacagagc 3690440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 205 - 314
Target Start/End: Complemental strand, 30108966 - 30108857
Alignment:
Q  205 aattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatattt 304  Q
    |||||||||||||||| |||  ||||||||| |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  30108966 aattggggaagaacgtgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatattt 30108867  T
Q  305 gaggaagaaa 314  Q
    | ||||||||    
T  30108866 ggggaagaaa 30108857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 8 - 314
Target Start/End: Original strand, 23954794 - 23955099
Alignment:
Q  8 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 107  Q
    ||||| ||||||||||||||||| ||| ||||||||||| |||||||  ||||| ||||| || |||||||| || ||||  || ||  | |||||| |     
T  23954794 ggacaccaacattcaagcactctaacaacaccattaaacttggagctcgaagatgaagctcgattttcataactgtttttttccatattctcacccc-cg 23954892  T
Q  108 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaat 207  Q
    |||||||||||||||  | || | |||||||| |||||||||||  ||||||   |||| ||||||||        |||||||||||||| || ||||||    
T  23954893 tcatttcagattcaatgtcaatagttttgcttcaagaaattttgaggattttagctttcagattcaataccaagaaattagggtttgaagtttgttgaat 23954992  T
Q  208 tggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgag 307  Q
    ||| |||||||   |||||| ||||||| | |||||||| |  ||||| ||||||||| |  | |||||  ||||||||||||||||||||| | ||| |    
T  23954993 tggcgaagaactggaccacttattattggaggaaatttttgttattttagagtgtagactgaagattgtgtaattagggttccaattttatacaattggg 23955092  T
Q  308 gaagaaa 314  Q
    |||||||    
T  23955093 gaagaaa 23955099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 14 - 175
Target Start/End: Complemental strand, 30109185 - 30109024
Alignment:
Q  14 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 113  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||| |||||||||||| ||| ||  |||||||| ||   ||||| | ||||||||    
T  30109185 caacattcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagttctttttgcccatatgaccacctcccatcattt 30109086  T
Q  114 cagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaat 175  Q
     |||||||| || |||| |||||||||||  |||||||  |||||||| |||| ||||||||    
T  30109085 tagattcaatttcaacagttttgcttgaatgaattttgcagattttgattttcagattcaat 30109024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 8 - 299
Target Start/End: Complemental strand, 46995261 - 46994970
Alignment:
Q  8 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 107  Q
    ||||| ||||||||||||||||||||| ||||||||||| |||||||| ||||| |||||||||||||||||  | || |  || ||  |||||||| ||    
T  46995261 ggacaccaacattcaagcactctcacaacaccattaaacttggagcttgaagatgaagcttgactttcataaccg-ttatttccatattcccaccccaca 46995163  T
Q  108 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaat-nnnnnnntattagggtttgaagctttttgaa 206  Q
    ||||||||||||||| || || | |||||||| |||||||||||  |||| ||  ||||  ||||| |         ||||||||||| || ||||||||    
T  46995162 tcatttcagattcaatttcaatagttttgcttcaagaaattttgaggattctggctttcaaattcactacgaaaaaaattagggtttggagttttttgaa 46995063  T
Q  207 ttggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttata 299  Q
    |||||| |||||   |||||| ||||||| | ||||||||    ||| | ||||||||||| || |||||  ||||| |||||||||||||||    
T  46995062 ttggggcagaactgaaccacttattattggaggaaattttcatgattatagagtgtagattgcagattgtgtaattaaggttccaattttata 46994970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 33 - 315
Target Start/End: Original strand, 36756398 - 36756681
Alignment:
Q  33 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 132  Q
    |||||||||||||| |||||||| ||||| ||||| |||||||||||  | |||| ||| ||  |||||||| ||||||||  ||||  | || || | |    
T  36756398 catcaccattaaacttggagcttgaagatgaagctcgactttcataacagttttttcccatattcccaccccccatcattttggattttatttcaatagt 36756497  T
Q  133 tttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta-ttagggtttgaagctttttgaattggggaagaacgttaccactaatt 231  Q
    ||||||| |||||||||||  || ||||  |||  ||||||||        | ||||||||||||| ||||||||||||||||||||   |||||| |||    
T  36756498 tttgcttcaagaaattttgaggaatttggttttatgattcaatacgaaaaaaattagggtttgaagttttttgaattggggaagaactaaaccacttatt 36756597  T
Q  232 attgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaag 315  Q
    |||| | ||||||| ||  ||||| ||||||||||| || |||||  |||||||||| |||||||||| | ||| |||||||||    
T  36756598 attggaggaaatttaggtgattttagagtgtagattgcagattgtgtaattagggtttcaattttatacaattggggaagaaag 36756681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 33 - 315
Target Start/End: Original strand, 36762195 - 36762478
Alignment:
Q  33 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 132  Q
    |||||||||||||| |||||||| ||||| ||||| |||||||||||  | |||| ||| ||  |||||||| ||||||||  ||||  | || || | |    
T  36762195 catcaccattaaacttggagcttgaagatgaagctcgactttcataacagttttttcccatattcccaccccccatcattttggattttatttcaatagt 36762294  T
Q  133 tttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta-ttagggtttgaagctttttgaattggggaagaacgttaccactaatt 231  Q
    ||||||| |||||||||||  || ||||  |||  ||||||||        | ||||||||||||| ||||||||||||||||||||   |||||| |||    
T  36762295 tttgcttcaagaaattttgaggaatttggttttatgattcaatacgaaaaaaattagggtttgaagttttttgaattggggaagaactaaaccacttatt 36762394  T
Q  232 attgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaag 315  Q
    |||| | ||||||| ||  ||||| ||||||||||| || |||||  |||||||||| |||||||||| | ||| |||||||||    
T  36762395 attggaggaaatttaggtgattttagagtgtagattgcagattgtgtaattagggtttcaattttatacaattggggaagaaag 36762478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 243 - 314
Target Start/End: Original strand, 19712014 - 19712085
Alignment:
Q  243 ttttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 314  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  19712014 ttttggaaattttggagtgtagattacagattgtaaaattagggttccaattttatatatttggggaagaaa 19712085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 184 - 315
Target Start/End: Original strand, 36766074 - 36766205
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||||||| ||||||||||||||||||||   |||||| ||||||| | ||||||| ||  ||||| ||||||||||| || |||||| |||||    
T  36766074 attagggtttgaagttttttgaattggggaagaactaaaccacttattattggaggaaatttaggtgattttagagtgtagattgcagattgtataatta 36766173  T
Q  284 gggttccaattttatatatttgaggaagaaag 315  Q
    ||||| |||||||||| | ||| |||||||||    
T  36766174 gggtttcaattttatacaattggggaagaaag 36766205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 185 - 299
Target Start/End: Original strand, 40785216 - 40785330
Alignment:
Q  185 ttagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattag 284  Q
    ||||||||||||| ||||||||||||||||||||   |||||| |||| || | ||||||||||  ||||||||||||||||| || |||||| ||||||    
T  40785216 ttagggtttgaagatttttgaattggggaagaactggaccacttattagtggaggaaattttggtgattttggagtgtagattgcagattgtacaattag 40785315  T
Q  285 ggttccaattttata 299  Q
    |||| ||||||||||    
T  40785316 ggttacaattttata 40785330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 184 - 318
Target Start/End: Complemental strand, 46811129 - 46810995
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||||||| ||||||||||||||||||||   |||||| ||||||| | ||||||| ||  ||||| ||||||||||| || | |||  |||||    
T  46811129 attagggtttgaagttttttgaattggggaagaactggaccacttattattggaggaaatttaggtgattttagagtgtagattgcagactgtgtaatta 46811030  T
Q  284 gggttccaattttatatatttgaggaagaaagagc 318  Q
    | |||||||||||||| | ||| | ||||||||||    
T  46811029 gagttccaattttatacaattgggaaagaaagagc 46810995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 204 - 318
Target Start/End: Original strand, 7403476 - 7403590
Alignment:
Q  204 gaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatt 303  Q
    ||||||| ||||||||||  ||  ||||| || ||||||| ||||  |||||||| | ||||||||||||||||||| |||||||||||||| ||| |||    
T  7403476 gaattggagaagaacgttgtcatcaattaatggaagaaatcttggagattttggactctagattacatattgtaaaactagggttccaatttaatagatt 7403575  T
Q  304 tgaggaagaaagagc 318  Q
    || | ||||||||||    
T  7403576 tgggaaagaaagagc 7403590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 184 - 312
Target Start/End: Complemental strand, 8421840 - 8421712
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| ||| ||||||||||||||||||||   |||||| ||||||| | ||||||| ||  || || || ||||||||| | |||||  |||||    
T  8421840 attagggttttaagttttttgaattggggaagaactggaccacttattattggaggaaatttaggtgatattagaatgtagattatagattgtgtaatta 8421741  T
Q  284 gggttccaattttatatatttgaggaaga 312  Q
    ||||| |||||||||||| ||| ||||||    
T  8421740 gggtttcaattttatataattggggaaga 8421712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 292 - 391
Target Start/End: Original strand, 19712098 - 19712197
Alignment:
Q  292 attttatatatttgaggaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaattttggtcactgtcgaccacattagtctctgct 391  Q
    |||||||||||||| ||||||||| ||||| ||||||| ||||||||||||||||  ||||| ||| || |||||||| ||  | | |||||||||||||    
T  19712098 attttatatatttggggaagaaagggcaaaacattttcaacaaatcaattaatttagtcctttgaagttatggtcactatcagctaaattagtctctgct 19712197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 317
Target Start/End: Original strand, 13036191 - 13036309
Alignment:
Q  199 tttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttat 298  Q
    |||||||||||||||||||| ||  ||  ||||| || ||||||||||||| |||||| | | ||| | ||| ||| |||||| ||| |||||| |||||    
T  13036191 tttttgaattggggaagaactttgtcatcaattaatggaagaaattttggggattttgaactctaggtgacaaattataaaataaggattccaaatttat 13036290  T
Q  299 atatttgaggaagaaagag 317  Q
    ||||||| |||||||||||    
T  13036291 atatttggggaagaaagag 13036309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 318
Target Start/End: Original strand, 45360929 - 45361062
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  |||| ||| ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  45360929 attagggttttaagttttttgaattggggaagaacattgacatcaattcttgtaagaaatttgggggattttgaactctaggtaacaaattataacatta 45361028  T
Q  284 gggttccaattttatatatttgaggaagaaagagc 318  Q
    ||||||||| |||| ||||||| ||||||||||||    
T  45361029 gggttccaaattta-atatttggggaagaaagagc 45361062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 184 - 312
Target Start/End: Complemental strand, 35342850 - 35342722
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| ||| ||||||||||||||||||||   || ||| ||||||| | ||||||| ||  || || || ||||||||| | |||||  |||||    
T  35342850 attagggttttaagttttttgaattggggaagaactggactacttattattggaggaaatttaggtgatattagaatgtagattatagattgtgtaatta 35342751  T
Q  284 gggttccaattttatatatttgaggaaga 312  Q
    |||||||||||||||| | ||| ||||||    
T  35342750 gggttccaattttatacaattggggaaga 35342722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 184 - 316
Target Start/End: Complemental strand, 37792097 - 37791965
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| ||| |||||||||||||||||||| || |||  | ||   | |||||||||| || |||||| | | ||| | ||| ||| ||| ||||    
T  37792097 attagggttttaagttttttgaattggggaagaactttgccataagttcagggaagaaatttttgggattttgaactctaggtgacaaattataacatta 37791998  T
Q  284 gggttccaattttatatatttgaggaagaaaga 316  Q
    ||||||||| |||||||||||| ||||||||||    
T  37791997 gggttccaaatttatatatttggggaagaaaga 37791965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 183 - 317
Target Start/End: Complemental strand, 23905052 - 23904917
Alignment:
Q  183 tattagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatt 282  Q
    ||||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| |||    
T  23905052 tattagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactctagttgacaaattataacatt 23904953  T
Q  283 agggttccaattttatatattt-gaggaagaaagag 317  Q
    |||||||||| ||||||||||| | |||||||||||    
T  23904952 agggttccaaatttatatatttgggggaagaaagag 23904917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 184 - 314
Target Start/End: Original strand, 6605032 - 6605162
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| ||| |||||||||||||||| ||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  6605032 attagggttttaagttttttgaattggggaaaaacattgacatcaattcatggaagaaatttgggggattttgaactctaggtaacaaattataacatta 6605131  T
Q  284 gggttccaattttatatatttgaggaagaaa 314  Q
    ||||||||| |||||||||||| ||||||||    
T  6605132 gggttccaaatttatatatttggggaagaaa 6605162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 184 - 318
Target Start/End: Original strand, 13169302 - 13169435
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  13169302 attagggttttaagttttttgaattggggaagaacattgacatcaattcatgtaagaaatttgggggattttgaactctaggtaacaaattataacatta 13169401  T
Q  284 gggttccaattttatatatttgaggaagaaagagc 318  Q
    ||| ||||| |||||||||||| ||||||||||||    
T  13169402 ggg-tccaaatttatatatttggggaagaaagagc 13169435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 184 - 318
Target Start/End: Complemental strand, 39858133 - 39857999
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| ||| |||||||||||| ||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  39858133 attagggttttaagttttttgaattggtgaagaacattgacatcaattcatgtaagaaatttgggggattttgaactctaggtaacaaattataacatta 39858034  T
Q  284 gggttccaattttatatatttgaggaagaaagagc 318  Q
    ||||||| | |||||||||||| ||||||||||||    
T  39858033 gggttccgaatttatatatttggggaagaaagagc 39857999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 184 - 314
Target Start/End: Complemental strand, 47384738 - 47384608
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || |||| |||||||| |||||| | | ||| | ||| ||| ||| ||||    
T  47384738 attagggttttaagttttttgaattggggaagaactttgacatcaattcatggaagacattttggggattttgaactctaggtgacaaattataacatta 47384639  T
Q  284 gggttccaattttatatatttgaggaagaaa 314  Q
    ||||||||| |||||||| ||| ||||||||    
T  47384638 gggttccaaatttatataattggggaagaaa 47384608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 70 - 175
Target Start/End: Original strand, 48705396 - 48705499
Alignment:
Q  70 actttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcgga 169  Q
    ||||| ||||||  |||||||| ||  ||||||||  |||||||| ||||||| ||||||| ||||||||||||||||| ||| |||| ||  |||||||    
T  48705396 actttgataattctttttgcccatatgcccacccc--atcatttcggattcaatttgaacagttttgcttgaagaaattatggagattctggttttcgga 48705493  T
Q  170 ttcaat 175  Q
    ||||||    
T  48705494 ttcaat 48705499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 113
Target Start/End: Original strand, 40785079 - 40785164
Alignment:
Q  28 tctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 113  Q
    ||||||||||||||||||| |||||||| ||||  ||||| |||||||||||||| ||||  || ||  |||||||| ||||||||    
T  40785079 tctcacatcaccattaaacttggagcttgaagaagaagctcgactttcataattgtttttttccatattcccaccccccatcattt 40785164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 184 - 256
Target Start/End: Complemental strand, 48851001 - 48850929
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttg 256  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||| || ||||||||||||||||||||    
T  48851001 attagggttttaagttttttgaattggggaagaactttggcatcaattaatggaagaaattttgggaattttg 48850929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 262 - 317
Target Start/End: Original strand, 12904046 - 12904101
Alignment:
Q  262 tagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagag 317  Q
    ||||||||| |||||||||||||||||| ||||||||| |||||  ||||||||||    
T  12904046 tagattacagattgtaaaattagggttcaaattttatagatttggagaagaaagag 12904101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 199 - 317
Target Start/End: Original strand, 48311427 - 48311543
Alignment:
Q  199 tttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttat 298  Q
    |||||||||||||||||||| ||  ||  ||||| |||||||||||||| | |||||| | | ||| | ||| ||| |||||||| ||||||||   |||    
T  48311427 tttttgaattggggaagaactttgtcatcaattaatgaaagaaattttgaggattttgaattctaggtgacaaattataaaattaaggttccaa--atat 48311524  T
Q  299 atatttgaggaagaaagag 317  Q
    ||||||| |||||||||||    
T  48311525 atatttggggaagaaagag 48311543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 318
Target Start/End: Complemental strand, 3921096 - 3921007
Alignment:
Q  228 aattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 318  Q
    ||||| || ||||||||||||| |||||| | | ||||||||| |||||| ||||| |||| |||||||||| ||| | ||||||||||||    
T  3921096 aattaatggaagaaattttggggattttgtactatagattacagattgtagaatta-ggtttcaattttatagattcggggaagaaagagc 3921007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 214
Target Start/End: Original strand, 12903939 - 12904026
Alignment:
Q  127 aacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaa 214  Q
    |||||||||||||||||||||||||| || |||| ||||||| ||||||        |||||||||||| | |||| |||||||||||    
T  12903939 aacaattttgcttgaagaaattttggagactttggatttcgggttcaataaaaacaaattagggtttgacgtttttagaattggggaa 12904026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 314
Target Start/End: Complemental strand, 38549975 - 38549845
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||| ||| ||| |||||||||||||||||||| ||   |  ||||  || ||||||||||||| |||||| | | ||| | ||| ||| ||| ||||    
T  38549975 attaggattttaagttttttgaattggggaagaactttggtatcaattcatggaagaaattttggggattttgaactctaggtgacaaattataacatta 38549876  T
Q  284 gggttccaattttatatatttgaggaagaaa 314  Q
    ||||||||| |||||||||||  ||||||||    
T  38549875 gggttccaaatttatatatttagggaagaaa 38549845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 317
Target Start/End: Original strand, 22155495 - 22155626
Alignment:
Q  185 ttagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattag 284  Q
    ||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||  | ||| ||| ||| ||||     
T  22155495 ttagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactctaagtgacaaattataacattaa 22155594  T
Q  285 ggttccaattttatatatttgaggaagaaagag 317  Q
    |||||||| |||||||||||| |||||||||||    
T  22155595 ggttccaa-tttatatatttggggaagaaagag 22155626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 317
Target Start/End: Original strand, 22211410 - 22211541
Alignment:
Q  185 ttagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattag 284  Q
    ||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||  | ||| ||| ||| ||||     
T  22211410 ttagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactctaagtgacaaattataacattaa 22211509  T
Q  285 ggttccaattttatatatttgaggaagaaagag 317  Q
    |||||||| |||||||||||| |||||||||||    
T  22211510 ggttccaa-tttatatatttggggaagaaagag 22211541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 316
Target Start/End: Complemental strand, 38472705 - 38472573
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||  ||| |||||| | | ||| | ||| ||| ||| ||||    
T  38472705 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaattcgggggattttgaactctaggtgacaaattataacatta 38472606  T
Q  284 gggttccaattttatatatttgaggaagaaaga 316  Q
     |||||||| |||||||||||| |||| |||||    
T  38472605 aggttccaaatttatatatttggggaataaaga 38472573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 186 - 317
Target Start/End: Complemental strand, 34775493 - 34775362
Alignment:
Q  186 tagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagg 285  Q
    |||||||| ||| ||| |||||||||||||||| ||  ||  ||||  || ||||||||| ||  |||||| | | ||| | ||| ||| ||| ||||||    
T  34775493 tagggttttaagttttctgaattggggaagaacattgacatcaattcatgtaagaaatttgggagattttgaactctaggtaacaaattataacattagg 34775394  T
Q  286 gttccaattttatatatttgaggaagaaagag 317  Q
    ||||||| |||||||||||  |||||||||||    
T  34775393 gttccaaatttatatatttagggaagaaagag 34775362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 151
Target Start/End: Complemental strand, 8421921 - 8421867
Alignment:
Q  97 cccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttg 151  Q
    |||||||||||||||||||||||||| || ||   |||||||| |||||||||||    
T  8421921 cccacccctcatcatttcagattcaatttcaagcgttttgcttcaagaaattttg 8421867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 369
Target Start/End: Complemental strand, 34784289 - 34784243
Alignment:
Q  323 cattttctacaaatcaattaatttgatccttggaaattttggtcact 369  Q
    |||||||| ||||||||| |||||  |||||||||||||||||||||    
T  34784289 cattttctgcaaatcaatcaatttcgtccttggaaattttggtcact 34784243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 27956933 - 27956988
Alignment:
Q  250 aattttggagtgtagattacatattgtaaaattagggttccaattttatatatttga 306  Q
    |||||||||||||||||| || |||||  |||||| ||||||| |||||||||||||    
T  27956933 aattttggagtgtagattgcagattgtgtaattagagttccaa-tttatatatttga 27956988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 317
Target Start/End: Original strand, 48227707 - 48227743
Alignment:
Q  281 ttagggttccaattttatatatttgaggaagaaagag 317  Q
    |||||||||||| |||||||||||| |||||||||||    
T  48227707 ttagggttccaaatttatatatttggggaagaaagag 48227743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 136; Significance: 8e-71; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 184 - 391
Target Start/End: Complemental strand, 11031828 - 11031621
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| | ||||||||||||    
T  11031828 attagggtttgaagttttttgaattagggaagaacgttaccactaattattggaagaaattttggggattttggagtgtagattatagattgtaaaatta 11031729  T
Q  284 gggttccaattttatatatttgaggaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaattttggtcactgtcgaccacattag 383  Q
    || ||||||||||||||||||| |||||||| |||||| |||||| | ||||||||| |||||  ||||||||||||||||||||| ||| ||| |||||    
T  11031728 ggcttccaattttatatatttggggaagaaaaagcaaaacattttatgcaaatcaataaatttagtccttggaaattttggtcactatcggccaaattag 11031629  T
Q  384 tctctgct 391  Q
    ||||||||    
T  11031628 tctctgct 11031621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 14 - 314
Target Start/End: Complemental strand, 40019748 - 40019448
Alignment:
Q  14 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 113  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||| | ||||||||    
T  40019748 caacattcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacctcccatcattt 40019649  T
Q  114 cagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattgggga 213  Q
     |||||||| || |||| |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| |||||||    
T  40019648 tagattcaatttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgcaattttttgatttgggga 40019549  T
Q  214 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaa 313  Q
    ||||||| |||  ||||||||| |||||| |||||  ||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  40019548 agaacgtgacccttaattattggaagaaaatttggagattttggggtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaa 40019449  T
Q  314 a 314  Q
    |    
T  40019448 a 40019448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 106 - 317
Target Start/End: Complemental strand, 25356834 - 25356622
Alignment:
Q  106 catcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta-ttagggtttgaagctttttg 204  Q
    ||||||||| ||||||| || || | |||||||| |||||||||||| ||||||| ||||| ||||||||        | ||||||||||||| ||||||    
T  25356834 catcatttctgattcaatttcaatagttttgcttcaagaaattttggggattttggatttcagattcaataaaaaagaaattagggtttgaagttttttg 25356735  T
Q  205 aattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatattt 304  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||  ||||||||||||||||||||||| ||| |||||| |||||| ||||||||||||    
T  25356734 aattggggaagaacgttaccacttattattggaagaaattttggtgattttggagtgtagattacatatagtataattagagttccagttttatatattt 25356635  T
Q  305 gaggaagaaagag 317  Q
    | |||||||||||    
T  25356634 ggggaagaaagag 25356622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 8 - 318
Target Start/End: Complemental strand, 33369362 - 33369050
Alignment:
Q  8 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 107  Q
    ||||| |||||||||||| |||||||||||||||||||  |||||||| |||||||||||  ||||||||||  | |||| | | ||  |||||  | ||    
T  33369362 ggacaccaacattcaagcgctctcacatcaccattaaatttggagcttgaagataaagctcaactttcataaccgttttttctcatattcccacgtccca 33369263  T
Q  108 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta--ttagggtttgaagctttttga 205  Q
    ||||||||||||||| || || | |||||||| ||||| ||||||  ||||||  |||| ||||||||        |  || |||||||||| |||||||    
T  33369262 tcatttcagattcaatttcaatagttttgcttcaagaagttttgggaattttggctttcagattcaataagaaaaaaaattcgggtttgaagttttttga 33369163  T
Q  206 attggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttg 305  Q
    |||||||||||||   |||||| ||||||| ||||| ||||||  ||||||||||||||||| || ||| |  |||||||||||||||||||||||||||    
T  33369162 attggggaagaactggaccacttattattggaagaagttttggtgattttggagtgtagattgcagattatgtaattagggttccaattttatatatttg 33369063  T
Q  306 aggaagaaagagc 318  Q
     ||||||||||||    
T  33369062 gggaagaaagagc 33369050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 14 - 305
Target Start/End: Complemental strand, 28432810 - 28432520
Alignment:
Q  14 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 113  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||| || |||||||||  ||  |  |||||||| ||   ||||||| ||||||||    
T  28432810 caacattcaagcactctcacatcaccattaaacatggaggatgaagatgaaacttgactttggtagctctttttgcccatatgaccacccc-catcattt 28432712  T
Q  114 cagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattgggga 213  Q
     |||||||| || ||||  ||||||||||  |||||||  |||||||  |||| ||||||||        | || |||||| |  ||||||| |||||||    
T  28432711 tagattcaatttcaacagatttgcttgaatgaattttgtagattttggttttcagattcaattaaaaaaaaatacggtttgcaattttttgatttgggga 28432612  T
Q  214 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttg 305  Q
    ||||||| |||  ||||||||| |||||| |||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  28432611 agaacgtgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttg 28432520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 8 - 317
Target Start/End: Original strand, 9876053 - 9876361
Alignment:
Q  8 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 107  Q
    ||||| ||||||||||||| |||||||  |||||||||| |||||| | ||||| |||||||||||||||||  | |||| ||| ||  |||||||| ||    
T  9876053 ggacaccaacattcaagcattctcacaataccattaaacttggagcctgaagatgaagcttgactttcataacagttttttcccatattcccacccc-ca 9876151  T
Q  108 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaat 207  Q
    ||||||||||||||| || || | |||||||| || ||||||||  |||||||  |||| |||||| |        |||||||||||||| |||||||||    
T  9876152 tcatttcagattcaatttcaatagttttgcttcaaaaaattttgaggattttggctttcagattcactacgaaaaaattagggtttgaagttttttgaat 9876251  T
Q  208 tggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgag 307  Q
    ||||| |||||   |||||| ||||||| | |||||||| |  ||| | ||||||||||| || |||||| |||||||||| |||||||||| | ||| |    
T  9876252 tggggcagaactggaccacttattattggaggaaatttttgtgattatagagtgtagattgcagattgtataattagggtttcaattttatacaattggg 9876351  T
Q  308 gaagaaagag 317  Q
    ||||||||||    
T  9876352 gaagaaagag 9876361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 184 - 314
Target Start/End: Original strand, 10269206 - 10269336
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||  | ||||||||||||    
T  10269206 attagcgtttgaagttttttgaattggggaagaacgttaccactaattattggaagaaattttggggattttggtgtgtagattgtagattgtaaaatta 10269305  T
Q  284 gggttccaattttatatatttgaggaagaaa 314  Q
    || ||||||||||||||||||| | ||||||    
T  10269306 ggcttccaattttatatatttgggaaagaaa 10269336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 28 - 318
Target Start/End: Complemental strand, 461756 - 461467
Alignment:
Q  28 tctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattga 127  Q
    ||||||||||||||||||| |||||||| ||||| ||||| ||||||||||| || || | ||| ||  ||||| || ||||||||||||||||| || |    
T  461756 tctcacatcaccattaaacttggagcttgaagatgaagctcgactttcataactgtttcttcccatattcccacaccccatcatttcagattcaatttca 461657  T
Q  128 acaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccact 227  Q
    | | ||||| || || ||||||||  |||||||| |||| ||||||||         ||||||||||||| ||||||||||||||||||||   ||||||    
T  461656 atagttttgtttcaa-aaattttgaggattttgactttcagattcaatgcgaaaaagttagggtttgaagatttttgaattggggaagaactggaccact 461558  T
Q  228 aattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 318  Q
     ||||  | | ||||||||||  |||||||||||||||||  | |||||  |||||||||| |||||||||| | ||||||||||||||||    
T  461557 tattacaggaggaaattttggtgattttggagtgtagattggagattgtgtaattagggttacaattttatacaattgaggaagaaagagc 461467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 28 - 314
Target Start/End: Complemental strand, 33159236 - 33158951
Alignment:
Q  28 tctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattga 127  Q
    ||||||||||||||||||| ||||| || ||||| ||||| ||||||||||| ||||||| || | |  ||||||||  |||||||||||||||| || |    
T  33159236 tctcacatcaccattaaacttggagtttgaagatgaagctcgactttcataactgctttttccat-attcccaccccctatcatttcagattcaatttca 33159138  T
Q  128 acaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccact 227  Q
    | | |||||||| || ||| ||||  |||||||| |||| ||||||||         ||||||||||||| ||||||||||||||||||||   ||||||    
T  33159137 atagttttgcttcaaaaaaatttgaggattttgactttcagattcaatgcgaaaaagttagggtttgaagatttttgaattggggaagaaccgaaccact 33159038  T
Q  228 aattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 314  Q
     |||| || | ||||||||||  ||||||||||||||||| || |||||  |||||||||| |||||||||| | ||| ||||||||    
T  33159037 tattactggaggaaattttggtgattttggagtgtagattgcagattgtgtaattagggttacaattttatacaattggggaagaaa 33158951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 184 - 314
Target Start/End: Original strand, 9186302 - 9186432
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| ||| ||||||||||||| |||||||||| |||||||||||| |||||||||  || |||||||||||||||||||| ||||||||||||    
T  9186302 attagggtttaaagttttttgaattgggtaagaacgttatcactaattattggaagaaatttatgggattttggagtgtagattacagattgtaaaatta 9186401  T
Q  284 gggttccaattttatatatttgaggaagaaa 314  Q
    ||||| |||||||| ||||||| ||||||||    
T  9186402 gggtttcaattttaaatatttggggaagaaa 9186432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 19 - 317
Target Start/End: Complemental strand, 38881992 - 38881691
Alignment:
Q  19 ttcaagcactctca--catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacc-cctcatcatttca 115  Q
    ||||||||||||||  ||||||| |||||| |||||||| ||||| ||||| |||||||||||||| |||| ||| ||  | |||| || ||||||||||    
T  38881992 ttcaagcactctcatacatcaccgttaaacttggagcttgaagatgaagctcgactttcataattgttttttcccatattctcacctccccatcatttca 38881893  T
Q  116 gattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaag 215  Q
    ||||||| || || | |||||||| |||||||||||  |||||||  |||  || | |          |||||||||| ||| |||||||||||||||||    
T  38881892 gattcaatttcaatagttttgcttcaagaaattttgaggattttggcttttagaataagaaaaaaaaaattagggtttcaagttttttgaattggggaag 38881793  T
Q  216 aacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaag 315  Q
    |||   |||||| ||||||| ||||||||| ||   |||||||||||| ||| ||||||||  ||||| ||||||||||||||||||||| |||||||||    
T  38881792 aactggaccacttattattggaagaaatttgggtggttttggagtgtacattgcatattgtgtaattaaggttccaattttatatatttggggaagaaag 38881693  T
Q  316 ag 317  Q
    ||    
T  38881692 ag 38881691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 184 - 314
Target Start/End: Complemental strand, 10268223 - 10268093
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||||||| | |||  |||||||||||| ||||| ||||||||||| ||||||||| ||| |||||||||||||||||| | |||| |||||||    
T  10268223 attagggtttgaagttatttacattggggaagaatgttactactaattattggaagaaatttgggggattttggagtgtagattatagattgaaaaatta 10268124  T
Q  284 gggttccaattttatatatttgaggaagaaa 314  Q
    ||||||||||| |||||||||| ||||||||    
T  10268123 gggttccaattctatatatttggggaagaaa 10268093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 84 - 314
Target Start/End: Original strand, 44620244 - 44620472
Alignment:
Q  84 ttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttga-atttcggattcaatnnnnnnn 182  Q
    |||||||  |||||||||||| ||||||||||||||||| |  |||| ||||| |||||| |||||||| ||||||   |||| | |||||||           
T  44620244 ttttgccgatacacccacccc-catcatttcagattcaattacaacagttttgtttgaaggaattttggagatttttttattttgaattcaatcaaaaaa 44620342  T
Q  183 tattagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatt 282  Q
     |||||||||||| | | ||| ||||||| |||||| |||||||||||||||| ||||| ||||| |||||||||||||| ||||| | |||||||||||    
T  44620343 -attagggtttgaggttatttcaattggg-aagaacattaccactaattattggaagaatttttgtgaattttggagtgtggattaaagattgtaaaatt 44620440  T
Q  283 agggttccaattttatatatttgaggaagaaa 314  Q
    |||||| |||||||||| ||||| ||||||||    
T  44620441 agggtttcaattttatacatttggggaagaaa 44620472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 33 - 318
Target Start/End: Original strand, 1321829 - 1322115
Alignment:
Q  33 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 132  Q
    |||||||||||||| |||||||| ||||| ||||| |||||||||||    |||| ||| ||  |||||||| | ||||||||||||||| || || | |    
T  1321829 catcaccattaaacttggagcttgaagatgaagctcgactttcataacaattttttcccatattcccaccccccttcatttcagattcaatttcaatagt 1321928  T
Q  133 tttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta-ttagggtttgaagctttttgaattggggaagaacgttaccactaatt 231  Q
    ||||||| |||||||||||  |||||||  ||||  |||||||        | ||||||||| ||| ||||||||||||||||||||   |||||| |||    
T  1321929 tttgcttcaagaaattttgtggattttggctttcatattcaatacgaaaaaaattagggtttcaagttttttgaattggggaagaactgaaccacttatt 1322028  T
Q  232 attgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 318  Q
    |||| | ||||||| ||  ||||| || |||||||| || |||||  ||||||||||||||||||||| | ||| |||||| |||||    
T  1322029 attggaggaaatttaggtgattttagaatgtagattgcagattgtgtaattagggttccaattttatacaattggggaagacagagc 1322115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 186 - 318
Target Start/End: Complemental strand, 10770768 - 10770636
Alignment:
Q  186 tagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagg 285  Q
    |||||||||||| |||| |||||| |||| ||||||  || |||||| | |||||||||||||| |||||||||||  ||||||| ||||||||||||||    
T  10770768 tagggtttgaagtttttagaattgaggaaaaacgttgtcattaattaattaaagaaattttggggattttggagtgcggattacagattgtaaaattagg 10770669  T
Q  286 gttccaattttatatatttgaggaagaaagagc 318  Q
    | |||||||||||| ||||| ||||||||||||    
T  10770668 gctccaattttatagatttggggaagaaagagc 10770636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 212 - 317
Target Start/End: Original strand, 25373335 - 25373440
Alignment:
Q  212 gaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaag 311  Q
    |||||| ||||| ||| ||||||| ||||||||||||  ||||||||||||||||||||||| | | ||| ||||||||||||| |||||||||||||||    
T  25373335 gaagaatgttactacttattattggaagaaattttggttattttggagtgtagattacatatagcacaatcagggttccaatttcatatatttgaggaag 25373434  T
Q  312 aaagag 317  Q
    ||||||    
T  25373435 aaagag 25373440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 237 - 318
Target Start/End: Complemental strand, 25705652 - 25705571
Alignment:
Q  237 aagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 318  Q
    ||||||||||||  ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||    
T  25705652 aagaaattttggtgattttggagtgtagattacatatagtataattagggttccaattttatatatttggggaagaaagagc 25705571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 63 - 318
Target Start/End: Complemental strand, 42895317 - 42895061
Alignment:
Q  63 aagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaa 162  Q
    ||||| ||||||||| | || |||| ||| ||  |||||||| ||||||||||||||||| || || | |||||||| |||||||||||  |||||||      
T  42895317 aagctcgactttcatgactgttttttcccatattcccaccccccatcatttcagattcaatttcaatagttttgcttcaagaaattttgaggattttggc 42895218  T
Q  163 tttcggattcaatnnnnnnnta-ttagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtg 261  Q
    ||||  |||||||        | ||||||||||||| ||||||||||||||||||||   |||| | || |||| |||| |||||||  ||||| |||||    
T  42895217 tttcaaattcaatacgaaaaaaattagggtttgaagttttttgaattggggaagaactggaccatttataattggaagatattttggtgattttagagtg 42895118  T
Q  262 tagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 318  Q
    || ||| || |||||  ||||||||||||||| ||||| | ||| ||||||||||||    
T  42895117 taaattgcagattgtgtaattagggttccaatgttatacaattggggaagaaagagc 42895061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 184 - 314
Target Start/End: Complemental strand, 15684178 - 15684048
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||| ||||||  |||| ||||||||||||||||||  ||  ||||| || |||||||||| ||||||||| | | ||||||||| |||||||||||     
T  15684178 attaggttttgaaatttttagaattggggaagaacgttgtcatcaattaatggaagaaatttttggaattttgaactctagattacagattgtaaaattg 15684079  T
Q  284 gggttccaattttatatatttgaggaagaaa 314  Q
    |||||||||||||||| ||||| ||||||||    
T  15684078 gggttccaattttatagatttggggaagaaa 15684048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 211 - 317
Target Start/End: Original strand, 25402504 - 25402610
Alignment:
Q  211 ggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaa 310  Q
    ||||||| ||||| ||| ||||||| ||||||||||||  |||||||||||||||||||| || ||| ||| |||||| |||||||||||||||| ||||    
T  25402504 ggaagaatgttactacttattattggaagaaattttggttattttggagtgtagattacagatagtacaatcagggtttcaattttatatatttggggaa 25402603  T
Q  311 gaaagag 317  Q
    |||||||    
T  25402604 gaaagag 25402610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 211 - 317
Target Start/End: Original strand, 25707013 - 25707119
Alignment:
Q  211 ggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaa 310  Q
    ||||||| ||||| ||| ||||||| ||||||||||||  |||||||||||||||||||| || ||| ||| |||||| |||||||||||||||| ||||    
T  25707013 ggaagaatgttactacttattattggaagaaattttggttattttggagtgtagattacagatagtacaatcagggtttcaattttatatatttggggaa 25707112  T
Q  311 gaaagag 317  Q
    |||||||    
T  25707113 gaaagag 25707119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 184 - 289
Target Start/End: Complemental strand, 12515499 - 12515395
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||||||| ||||||||| |||||||||||||| | |||||||  ||| ||||||||||| |||||||||||||||||| | ||||||||||||    
T  12515499 attagggtttgaagttttttgaatcggggaagaacgttatcgctaattagggaa-gaaattttggggattttggagtgtagattaaagattgtaaaatta 12515401  T
Q  284 gggttc 289  Q
     |||||    
T  12515400 cggttc 12515395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 199 - 318
Target Start/End: Complemental strand, 11719865 - 11719746
Alignment:
Q  199 tttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttat 298  Q
    |||||||||||||||||||||||  ||  ||||| || ||||||||||||| |||||||| | ||| | | | ||||||||||| |||||||||||||||    
T  11719865 tttttgaattggggaagaacgttgtcatcaattaatggaagaaattttggggattttggactctaggtgataaattgtaaaattggggttccaattttat 11719766  T
Q  299 atatttgaggaagaaagagc 318  Q
    | ||||| ||||||||||||    
T  11719765 agatttggggaagaaagagc 11719746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 251 - 318
Target Start/End: Complemental strand, 25370865 - 25370798
Alignment:
Q  251 attttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 318  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||    
T  25370865 attttggagtgtagattacatatagtataattagggttccaattttatatatttggggaagaaagagc 25370798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 33748935 - 33748793
Alignment:
Q  8 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 107  Q
    ||||| ||||||||||||||||||||| ||| ||||||| |||||||| ||||| || ||||||||||||||  | ||||  || ||  |||||||| ||    
T  33748935 ggacaccaacattcaagcactctcacaacactattaaacttggagcttgaagatgaaacttgactttcataaccg-ttttttccatattcccaccccaca 33748837  T
Q  108 tcatttcagattcaaattgaacaattttgcttgaagaaattttg 151  Q
    ||||||||||||||| || || | |||||||| |||||||||||    
T  33748836 tcatttcagattcaatttcaatagttttgcttcaagaaattttg 33748793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 294 - 391
Target Start/End: Original strand, 9186447 - 9186544
Alignment:
Q  294 tttatatatttgaggaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaattttggtcactgtcgaccacattagtctctgct 391  Q
    |||||||||||| ||||||||||||||  |||||||| ||||||||| |||||  || |||||||||||||||||| ||| ||| |||||||||||||    
T  9186447 tttatatatttggggaagaaagagcaagtcattttctgcaaatcaatcaatttagtcattggaaattttggtcactatcggccaaattagtctctgct 9186544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 184 - 317
Target Start/End: Complemental strand, 17807446 - 17807313
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||| ||||||| ||||||||||||||||||| |||  ||  ||||| || ||||| ||||||| |||||| | | ||| | ||| ||| ||||||||    
T  17807446 attaggttttgaagttttttgaattggggaagaatgttgtcatcaattaatggaagaatttttggggattttgaactctaggtgacaaattataaaatta 17807347  T
Q  284 gggttccaattttatatatttgaggaagaaagag 317  Q
    ||||||||| |||||||||||| |||||||||||    
T  17807346 gggttccaaatttatatatttgtggaagaaagag 17807313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 8 - 318
Target Start/End: Original strand, 31822975 - 31823276
Alignment:
Q  8 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 107  Q
    ||||| ||||||||||||||||||||| ||||||||||| ||||| || |||||          ||||||||  | |||| ||| ||  |||||||| ||    
T  31822975 ggacaccaacattcaagcactctcacaacaccattaaacttggagtttgaagat----------tttcataaccgttttttcccatattcccaccccaca 31823064  T
Q  108 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta--ttagggtttgaagctttttga 205  Q
    ||||||||||||||| || || | |||||||| |||||||||||  |||||||  |||  |||||| |        |  ||||||||||||| |||||||    
T  31823065 tcatttcagattcaa-ttcaatagttttgcttcaagaaattttgaggattttggcttttagattcactacgaaaaaaaattagggtttgaagttttttga 31823163  T
Q  206 attggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttg 305  Q
    ||||||| |||||   |||||||||||||  | ||||||||    ||| | ||||||||||| || |||||  ||||||||||||||||||||| | |||    
T  31823164 attggggcagaactgaaccactaattatttgaggaaattttcatgattatagagtgtagattgcagattgtgtaattagggttccaattttatacaattg 31823263  T
Q  306 aggaagaaagagc 318  Q
     ||||||||||||    
T  31823264 gggaagaaagagc 31823276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 184 - 315
Target Start/End: Original strand, 11790496 - 11790627
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||| ||||||| |||| ||||| |||||||| |||  ||  ||||| || ||||||||||||| |||||||| | ||||| ||| |||||||||| |    
T  11790496 attaggttttgaagtttttagaatttgggaagaaggttgtcatcaattaatggaagaaattttggggattttggactatagataacaaattgtaaaatca 11790595  T
Q  284 gggttccaattttatatatttgaggaagaaag 315  Q
     ||||||| ||||||| |||||||||||||||    
T  11790596 aggttccatttttatagatttgaggaagaaag 11790627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 184 - 318
Target Start/End: Original strand, 32823938 - 32824072
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||||||| |||||||||||||||| |||   |||||| ||||||| | ||||||| ||  |||||  |||||||||| || |||||  |||||    
T  32823938 attagggtttgaagttttttgaattggggaaaaactgaaccacttattattggaggaaatttaggcgattttatagtgtagattgcagattgtgtaatta 32824037  T
Q  284 gggttccaattttatatatttgaggaagaaagagc 318  Q
    |||||||||||||| | | ||| ||||||||||||    
T  32824038 gggttccaattttaaacaattggggaagaaagagc 32824072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 30 - 175
Target Start/End: Original strand, 25371636 - 25371781
Alignment:
Q  30 tcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaac 129  Q
    ||||||||||||||||| |||||||| ||||| ||||| ||| ||||||| || |||| ||| ||  |||||||||||||||||| ||||||| || ||     
T  25371636 tcacatcaccattaaacttggagcttgaagatgaagctcgacattcataactgttttttcccatatgcccacccctcatcatttcggattcaatttcaat 25371735  T
Q  130 aattttgcttgaagaaattttggtgattttgaatttcggattcaat 175  Q
    | |||||||  || |||||||   ||||||| ||||| ||||||||    
T  25371736 agttttgctgcaataaattttttggattttggatttcagattcaat 25371781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 199 - 318
Target Start/End: Complemental strand, 24527303 - 24527184
Alignment:
Q  199 tttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttat 298  Q
    ||||||||||||||||||||   |||||| ||||||| | ||||||| ||  ||||| || |||||||| || |||||  ||||||||||||||||||||    
T  24527303 tttttgaattggggaagaactggaccacttattattggaggaaatttaggtgattttagaatgtagattgcagattgtgtaattagggttccaattttat 24527204  T
Q  299 atatttgaggaagaaagagc 318  Q
    | | ||| |||||| |||||    
T  24527203 acaattggggaagatagagc 24527184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 318
Target Start/End: Complemental strand, 37525267 - 37525149
Alignment:
Q  200 ttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttata 299  Q
    |||||||||||||||||||   |||||| |||| || | ||||||||||  |||||||||||||||||  | |||||  |||||||||| ||||||||||    
T  37525267 ttttgaattggggaagaactgaaccacttattagtggaggaaattttggtgattttggagtgtagattgaagattgtgcaattagggttacaattttata 37525168  T
Q  300 tatttgaggaagaaagagc 318  Q
     | ||| |||| |||||||    
T  37525167 caattggggaataaagagc 37525149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 318
Target Start/End: Complemental strand, 41041166 - 41041032
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| ||| | |||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  41041166 attagggttttaagttatttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactctaggtgacaaattataacatta 41041067  T
Q  284 gggttccaattttatatatttgaggaagaaagagc 318  Q
    ||||||||| |||||||||||| ||||||||||||    
T  41041066 gggttccaaatttatatatttggggaagaaagagc 41041032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 184 - 317
Target Start/End: Complemental strand, 13484964 - 13484831
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  13484964 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactctaggtgacaaattataacatta 13484865  T
Q  284 gggttccaattttatatatttgaggaagaaagag 317  Q
     |||||||| |||||||||||| |||||||||||    
T  13484864 aggttccaaatttatatatttggggaagaaagag 13484831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 28 - 113
Target Start/End: Complemental strand, 37525418 - 37525333
Alignment:
Q  28 tctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 113  Q
    ||||||||||||||||||| |||||||| ||||| ||||| ||||||||||| || |||| ||| ||  |||||||| ||||||||    
T  37525418 tctcacatcaccattaaacttggagcttgaagatgaagctcgactttcataactgttttttcccatattcccaccccccatcattt 37525333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 106 - 218
Target Start/End: Original strand, 8655640 - 8655752
Alignment:
Q  106 catcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttga 205  Q
    ||||||||||||||||| || || | |||||||| |||||||||||  |||||||  |||| ||||||||        |||||||||| ||| |||||||    
T  8655640 catcatttcagattcaatttcaatagttttgcttcaagaaattttgtggattttggctttcagattcaatacgaaaaaattagggtttcaagttttttga 8655739  T
Q  206 attggggaagaac 218  Q
    |||||||||||||    
T  8655740 attggggaagaac 8655752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 317
Target Start/End: Complemental strand, 41824394 - 41824261
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||||||| |||||| | | ||  | ||| ||| ||| ||||    
T  41824394 attagggttttaagttttttgaattggggaagaactttgacatcaattcatggaagaaattttggggattttgaactctacgtgacaaattataacatta 41824295  T
Q  284 gggttccaattttatatatttgaggaagaaagag 317  Q
    ||||| ||| | |||||||||| |||||||||||    
T  41824294 gggtttcaaatatatatatttggggaagaaagag 41824261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 303 - 391
Target Start/End: Complemental strand, 10268086 - 10267998
Alignment:
Q  303 ttgaggaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaattttggtcactgtcgaccacattagtctctgct 391  Q
    ||||||||||||||||||| |||||||   |||||||| |||||  || ||||||||| |||||||| ||  ||| |||||||||||||    
T  10268086 ttgaggaagaaagagcaaaacattttcagtaaatcaatcaatttagtcattggaaattatggtcactatcagccaaattagtctctgct 10267998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 184 - 312
Target Start/End: Complemental strand, 31199909 - 31199781
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| ||| || |||||||| ||||||||   |||||| ||||||| | ||||||| ||  || || || ||||||||| | |||||  |||||    
T  31199909 attagggttttaagtttgttgaattgaggaagaactggaccacttattattggaggaaatttaggtgatattagaatgtagattatagattgtgtaatta 31199810  T
Q  284 gggttccaattttatatatttgaggaaga 312  Q
    |||||||||||||||| | ||| ||||||    
T  31199809 gggttccaattttatacaattggggaaga 31199781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 184 - 299
Target Start/End: Complemental strand, 33748759 - 33748644
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||||||  |||||||||||||| |||||   |||||| ||||||| | ||||||||    ||| | ||||||||||| || |||||  |||||    
T  33748759 attagggtttgaatttttttgaattggggcagaactgaaccacttattattggaggaaattttcatgattatagagtgtagattgcagattgtgtaatta 33748660  T
Q  284 gggttccaattttata 299  Q
     |||||||||||||||    
T  33748659 aggttccaattttata 33748644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 11720047 - 11719994
Alignment:
Q  8 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagat 61  Q
    ||||| ||||||||||| ||||||||||||||||||| ||| |||||| |||||    
T  11720047 ggacaccaacattcaagtactctcacatcaccattaagcatagagcttgaagat 11719994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 22273535 - 22273668
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||| ||| ||| || ||||||||||||||||| ||  ||  ||||  || ||||||||| ||  |||||| | | ||| | ||| ||| ||| ||||    
T  22273535 attaggattttaagtttcttgaattggggaagaacattgacatcaattcatggaagaaatttgggagattttgaactctaggtgacaaattataacatta 22273634  T
Q  284 gggttccaattttatatatttgaggaagaaagag 317  Q
    ||||||||| |||||||||||| |||||||||||    
T  22273635 gggttccaaatttatatatttggggaagaaagag 22273668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 316
Target Start/End: Original strand, 29693963 - 29694095
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| ||| ||||| |||||| ||||||| ||  ||  ||||  || ||||||| ||| | |||||| | | ||| | ||| ||| ||| ||||    
T  29693963 attagggttttaagttttttaaattggagaagaactttgtcatcaattcatggaagaaatcttgcggattttgaactctaggtgacaaattataacatta 29694062  T
Q  284 gggttccaattttatatatttgaggaagaaaga 316  Q
    ||||||||| |||||||||||| ||||||||||    
T  29694063 gggttccaaatttatatatttggggaagaaaga 29694095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 32823816 - 32823863
Alignment:
Q  33 catcaccattaaacatggagcttaaagataaagcttgactttcataat 80  Q
    |||||||||||||| || ||||| ||||||||||| ||||||||||||    
T  32823816 catcaccattaaacttgaagcttgaagataaagctcgactttcataat 32823863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 11790317 - 11790370
Alignment:
Q  8 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagat 61  Q
    ||||| ||||||||||| ||||||||||||||||| || || |||||| |||||    
T  11790317 ggacaccaacattcaagtactctcacatcaccattcaagatagagcttgaagat 11790370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 42895353 - 42895321
Alignment:
Q  14 caacattcaagcactctcacatcaccattaaac 46  Q
    ||||||||||||||||||||| |||||||||||    
T  42895353 caacattcaagcactctcacaacaccattaaac 42895321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 128; Significance: 5e-66; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 10 - 318
Target Start/End: Complemental strand, 26448342 - 26448037
Alignment:
Q  10 acatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatc 109  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||| ||| | |||||||||||| |||| |  || ||||| ||  ||||||| |||||    
T  26448342 acatcaacattcaaacactctcacatcaccattaaagatggagcttgaaggtgaagcttgactttgataactctttgtgcccatatgcccaccc-tcatc 26448244  T
Q  110 atttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattg 209  Q
    ||||||||||||| ||||||| |||||||||||||||||||||  ||| ||  |||  ||||||||        |||||||||||||| |||||||||||    
T  26448243 atttcagattcaatttgaacagttttgcttgaagaaattttgggtattctggtttttagattcaataaaaaaa-attagggtttgaagttttttgaattg 26448145  T
Q  210 gggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgagga 309  Q
     | ||| ||||||||||||||||||| |||||||||| ||  ||||||||| ||||| | |||||||||||||| |||||||||||||||||||||||||    
T  26448144 agaaaggacgttaccactaattattggaagaaattttaggg-ttttggagtatagataaaatattgtaaaattaaggttccaattttatatatttgagga 26448046  T
Q  310 agaaagagc 318  Q
     ||||||||    
T  26448045 tgaaagagc 26448037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 96 - 316
Target Start/End: Complemental strand, 30501610 - 30501391
Alignment:
Q  96 acccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttga 195  Q
    ||||||||  ||||||||||||||||| ||||||| ||||||||||||||||||| | || | ||| |||||||||||||        || ||||||||     
T  30501610 acccacccaccatcatttcagattcaatttgaacagttttgcttgaagaaattttagggaatctgattttcggattcaataaaaaaaaat-agggtttgg 30501512  T
Q  196 agctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattt 295  Q
     | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  30501511 ggttttttgaattggggaagtacgttaccactaattattgaaagaaattttgggaattttggagtgtagattaaagattgtaaaattagggttccaattt 30501412  T
Q  296 tatatatttgaggaagaaaga 316  Q
    |||||||| ||||||||||||    
T  30501411 tatatattggaggaagaaaga 30501391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 110 - 314
Target Start/End: Original strand, 40962981 - 40963184
Alignment:
Q  110 atttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattg 209  Q
    ||||||||||||| ||||||||||||||||||||||||||||  |||| ||   ||||||||||||        |||||||||||||  |||||||||||    
T  40962981 atttcagattcaatttgaacaattttgcttgaagaaattttgtggattctggtattcggattcaataaaaaaa-attagggtttgaatttttttgaattg 40963079  T
Q  210 gggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgagga 309  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||    
T  40963080 gggaagaacgttaccactaattattgtaagaaattttgggaattttggagtgtagattaaagattgtaaaattagggttccaattttatatatttgggga 40963179  T
Q  310 agaaa 314  Q
    |||||    
T  40963180 agaaa 40963184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 8 - 316
Target Start/End: Original strand, 1847154 - 1847462
Alignment:
Q  8 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 107  Q
    ||||| |||||||||||| |||||||||||||||||||| |||||||| ||||| ||||| ||||||||||| || |||| ||| ||  |||||||| ||    
T  1847154 ggacaccaacattcaagctctctcacatcaccattaaacttggagcttgaagatgaagctcgactttcataactgttttttcccatattcccacccccca 1847253  T
Q  108 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaat 207  Q
    |||||||||||||||  | || | |||||||| |||||||||||  |||||||  ||||  |||||||        ||||||||||| || ||||| |||    
T  1847254 tcatttcagattcaatatcaatagttttgcttcaagaaattttgaggattttggctttcaaattcaatacgaaaaaattagggtttgtagttttttaaat 1847353  T
Q  208 tggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgag 307  Q
    |||||||||||   |||| |  |||||| | ||||||||||  |||||| ||||||||||||| |||||  ||||||||||||||||||||| ||||| |    
T  1847354 tggggaagaactgaaccattttttattggatgaaattttggtgattttgaagtgtagattacaaattgtgtaattagggttccaattttatacatttggg 1847453  T
Q  308 gaagaaaga 316  Q
    |||||||||    
T  1847454 gaagaaaga 1847462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 14 - 314
Target Start/End: Original strand, 41945600 - 41945898
Alignment:
Q  14 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 113  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||||| | ||||||    
T  41945600 caacattcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccaccccccttcattt 41945699  T
Q  114 cagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattgggga 213  Q
     |||||||| || |||| ||||||||||| || |||||  |||||||  |||| ||||||||        |||||| |||| |  ||||||| |||||||    
T  41945700 tagattcaatttcaacagttttgcttgaataa-ttttgcagattttggttttcagattcaattaaaaaa-attaggatttgcaattttttgatttgggga 41945797  T
Q  214 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaa 313  Q
    ||||||| |||  ||||||||| |||||| ||| |  |||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||    
T  41945798 agaacgtgacccttaattattggaagaaaatttagagattttggagtgtagattacacatcgtaaaattagggttccaattttatatatttggggaagaa 41945897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 20 - 316
Target Start/End: Complemental strand, 32843017 - 32842721
Alignment:
Q  20 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 119  Q
    ||||||| ||| |||||||||||||||||  || || ||||| ||||| |||||| | || |  | |||||| ||| |||||| | |||||||||  |||    
T  32843017 tcaagcattctgacatcaccattaaacataaagtttgaagatgaagctcgactttgagaacttgtgttgcccatacgcccaccacccatcatttcgcatt 32842918  T
Q  120 caaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacg 219  Q
    |||  ||||||||||||||||||    |||||| ||||||| ||||| ||||||||        |||||||||||||| |||| ||| |  |||||||||    
T  32842917 caatctgaacaattttgcttgaattttttttggggattttggatttcagattcaatcaaaacaaattagggtttgaagtttttagaagtaaggaagaacg 32842818  T
Q  220 ttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaaga 316  Q
    ||  || |||||| || |||||||||||||||||||||| ||||||||| | |||| ||||||||||||||||||||||| ||||||||||||||||    
T  32842817 ttgtcattaattaatggaagaaattttgggaattttggattgtagattagagattgaaaaattagggttccaattttatagatttgaggaagaaaga 32842721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 84 - 310
Target Start/End: Complemental strand, 49495011 - 49494787
Alignment:
Q  84 ttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttga-atttcggattcaatnnnnnnn 182  Q
    |||||||| |||||||||||| ||||||||||||||||| |  |||| ||||| |||||| |||||| | ||||||   ||||||||||||||           
T  49495011 ttttgcccatacacccacccc-catcatttcagattcaattataacagttttgtttgaaggaattttcgggatttttttatttcggattcaatcaaaaa- 49494914  T
Q  183 tattagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatt 282  Q
     |||||||||||| | | ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||   |||||||||||    
T  49494913 -attagggtttgaggttatttgaattggggaagaacgttaccactaattattggaagaatttttgggaattttggagtgtggattaatgattgtaaaatt 49494815  T
Q  283 agggttccaattttatatatttgaggaa 310  Q
    ||||||||||||||||| ||||| ||||    
T  49494814 agggttccaattttatacatttggggaa 49494787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 17 - 318
Target Start/End: Original strand, 48634872 - 48635173
Alignment:
Q  17 cattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcag 116  Q
    |||||||||||||||||| ||||||||||| |||||||  ||||| ||||| ||||||||||| || ||||  || ||  |||||||| |||||||||||    
T  48634872 cattcaagcactctcacaacaccattaaacttggagctcgaagatgaagctcgactttcataactgtttttttccatattcccaccccccatcatttcag 48634971  T
Q  117 attcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaaga 216  Q
    |||||| || || | |||||||| |||||||||||  |||||||| ||||  |||||||        |||||||||||||| ||||||||||||||||||    
T  48634972 attcaatttcaatagttttgctttaagaaattttgaggattttgactttcaaattcaatacgaaaaaattagggtttgaagttttttgaattggggaaga 48635071  T
Q  217 acgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaaga 316  Q
    ||   |||| | || |||| | || ||||| |  ||||| ||||||| |||  | |||||  ||||||||||||||| ||||| | ||| ||||||||||    
T  48635072 actggaccatttataattggaggatattttagtgattttagagtgtaaattgtagattgtgtaattagggttccaatgttatacaattggggaagaaaga 48635171  T
Q  317 gc 318  Q
    ||    
T  48635172 gc 48635173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 29 - 318
Target Start/End: Complemental strand, 24382293 - 24382004
Alignment:
Q  29 ctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaa 128  Q
    ||||||||||||||| || |||||||| ||||| ||| |  ||||||||||  | ||||  || ||  |||||||| ||||||||||||||||| || ||    
T  24382293 ctcacatcaccattatacttggagcttcaagatgaagttaaactttcataacagtttttttccatattcccaccccccatcatttcagattcaatttcaa 24382194  T
Q  129 caattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccacta 228  Q
     | |||||||| || |||| |||  |||||||| |||| ||||||||        |||||||||||||| ||||| ||||||||||||||   | ||||     
T  24382193 tagttttgcttcaaaaaatcttgaggattttgactttcagattcaatgcgaaaaaattagggtttgaagattttttaattggggaagaactggatcactt 24382094  T
Q  229 attattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 318  Q
    |||| |||| ||||||||||  |||||||||||||||||  | |||||  |||||||||| ||| |||||| | ||| ||||||||||||    
T  24382093 attactgaaggaaattttggtgattttggagtgtagattgaagattgtgtaattagggttacaactttatacaattggggaagaaagagc 24382004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 199 - 314
Target Start/End: Complemental strand, 37865791 - 37865676
Alignment:
Q  199 tttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttat 298  Q
    ||||||| |||||||||||||| |||  ||||||||  |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||    
T  37865791 tttttgatttggggaagaacgtgacccttaattattagaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttat 37865692  T
Q  299 atatttgaggaagaaa 314  Q
    ||||||| ||||||||    
T  37865691 atatttggggaagaaa 37865676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 37 - 299
Target Start/End: Complemental strand, 31886088 - 31885827
Alignment:
Q  37 accattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttg 136  Q
    |||||||||| |||| ||| ||||| ||||| ||||||||||| || |||| ||| ||  |||||||| | |||||| |||||||| || || | | |||    
T  31886088 accattaaacttggatcttgaagatgaagctcgactttcataactgttttttcccatattcccacccc-cgtcattttagattcaatttcaatagtcttg 31885990  T
Q  137 cttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaattattga 236  Q
    ||| |||||||||||  |||||||  ||||  |||||||        |||||||||||||| ||||| ||||||||||||||   |||||| |||||||     
T  31885989 cttcaagaaattttgaggattttggctttcaaattcaatacgaaaaaattagggtttgaagttttttcaattggggaagaactgaaccacttattattgg 31885890  T
Q  237 aagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttata 299  Q
    | ||||||||||  ||||| ||||||||||| || |||||  |||||| ||||||||||||||    
T  31885889 aggaaattttggtgattttagagtgtagattgcagattgtgtaattagagttccaattttata 31885827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 184 - 318
Target Start/End: Complemental strand, 2975883 - 2975749
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||||||| ||||||||||||||||||||   ||| || ||||||| ||||||||||||  ||||||||||||||| |  | |||||  |||||    
T  2975883 attagggtttgaagttttttgaattggggaagaactggaccgcttattattggaagaaattttggtgattttggagtgtagaatgaagattgtgtaatta 2975784  T
Q  284 gggttccaattttatatatttgaggaagaaagagc 318  Q
      |||||||||||||||||||| ||||||||||||    
T  2975783 aagttccaattttatatatttggggaagaaagagc 2975749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 205 - 314
Target Start/End: Original strand, 33051144 - 33051253
Alignment:
Q  205 aattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatattt 304  Q
    ||||||||||||| ||||||||||||||||| ||||  |||||| ||||||||||||| ||||| |||||||| ||||| |||||| |||||||| ||||    
T  33051144 aattggggaagaatgttaccactaattattggaagattttttggaaattttggagtgtggattaaatattgtataattatggttcctattttatacattt 33051243  T
Q  305 gaggaagaaa 314  Q
    | ||||||||    
T  33051244 ggggaagaaa 33051253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 8 - 216
Target Start/End: Complemental strand, 33112441 - 33112233
Alignment:
Q  8 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacaccca-cccctc 106  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||||| || |||| ||| ||  |||| |||| |    
T  33112441 ggacaccaacattcaagcactctcacatcaccattaaacttggagtttgaagatgaagctcgactttcataactgttttttcccatattcccaccccccc 33112342  T
Q  107 atcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaa 206  Q
    |||||||||||| ||| || || | |||||||| ||||||||||   ||||||||  |||  |||||||         ||||||||||||| ||||||||    
T  33112341 atcatttcagatccaatttcaatagttttgcttcaagaaattttaaggattttgacattcaaattcaatgcaaaaa-gttagggtttgaagttttttgaa 33112243  T
Q  207 ttggggaaga 216  Q
    ||||||||||    
T  33112242 ttggggaaga 33112233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 14 - 142
Target Start/End: Complemental strand, 37886367 - 37886239
Alignment:
Q  14 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 113  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||||||||||||||    
T  37886367 caacattcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacccctcatcattt 37886268  T
Q  114 cagattcaaattgaacaattttgcttgaa 142  Q
     |||||||| || |||| |||||||||||    
T  37886267 tagattcaatttcaacagttttgcttgaa 37886239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 14 - 218
Target Start/End: Original strand, 23775149 - 23775353
Alignment:
Q  14 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 113  Q
    ||||||||||||||||||||| ||||||| ||| | |||||  ||||| ||||| ||||||||||| || |||| ||| ||  |||| ||| ||||||||    
T  23775149 caacattcaagcactctcacaacaccattgaacttagagctcgaagatgaagctcgactttcataactgttttttcccatattcccatcccccatcattt 23775248  T
Q  114 cagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattgggga 213  Q
    ||||||||| || || | |||||||| |||||||||||  |||||||  ||||  ||| |||        |||||||||||||| |||||||| ||||||    
T  23775249 cagattcaatttcaatagttttgcttcaagaaattttgaggattttggctttcaaattaaatacgaaaaaattagggtttgaagttttttgaagtgggga 23775348  T
Q  214 agaac 218  Q
    |||||    
T  23775349 agaac 23775353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 318
Target Start/End: Complemental strand, 35862141 - 35861831
Alignment:
Q  8 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 107  Q
    ||||| ||||| |||| |||||||||||||||||||||||| |||||| ||||| ||  |  ||||| ||||||| |||||||| |||  ||||| | ||    
T  35862141 ggacaccaacactcaaacactctcacatcaccattaaacatagagcttgaagatgaaaatcaactttgataattgtttttgcccatacgtccaccaccca 35862042  T
Q  108 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgat-tttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaa 206  Q
    |||||||||||||||  ||||||      ||||||| |||||||| ||| |||||||||||||||||||        | |||| || |||| ||||| ||    
T  35862041 tcatttcagattcaacctgaacaccaaaacttgaaggaattttggggatctttgaatttcggattcaataaaaaaa-aataggtttagaag-ttttttaa 35861944  T
Q  207 ttggggaagaacgttaccactaattattgaaaga-aattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttg 305  Q
     |||||||||| |||  ||  |||||  | |||| | ||||||| |||||||| | ||||||||| ||| || |||||||||| |||||||||| |||||    
T  35861943 atggggaagaatgttgtcatcaattaaaggaagatatttttggggattttggactatagattacaaattttataattagggtttcaattttatagatttg 35861844  T
Q  306 aggaagaaagagc 318  Q
     ||||||||||||    
T  35861843 gggaagaaagagc 35861831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 8 - 160
Target Start/End: Complemental strand, 45897640 - 45897487
Alignment:
Q  8 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattg-cttttgcccttacacccacccctc 106  Q
    ||||| ||||||||||||||||||||| ||||||||||| |||||||| ||||| |||||||||||| ||||  |  |||| ||| ||  |||||||| |    
T  45897640 ggacaccaacattcaagcactctcacaacaccattaaacttggagcttgaagatgaagcttgacttttataaccgtttttttcccatattcccaccccac 45897541  T
Q  107 atcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttg 160  Q
    ||||||||| |||||| || || | |||||||| |||||||||||  |||||||    
T  45897540 atcatttcatattcaatttcaatagttttgcttcaagaaattttgaggattttg 45897487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 146
Target Start/End: Complemental strand, 2976024 - 2975887
Alignment:
Q  8 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 107  Q
    ||||| ||||||||||||| ||||||||||||||||||| |||| ||| ||||| ||||| |||||| |||| || |||| ||| ||  ||||||||| |    
T  2976024 ggacaacaacattcaagcaatctcacatcaccattaaacttggaacttgaagatgaagctcgactttgataactg-tttttcccatattcccacccctta 2975926  T
Q  108 tcatttcagattcaaattgaacaattttgcttgaagaaa 146  Q
    ||||||||||||||| || || | |||||||| ||||||    
T  2975925 tcatttcagattcaatttcaatagttttgcttcaagaaa 2975887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 33 - 318
Target Start/End: Complemental strand, 18429314 - 18429030
Alignment:
Q  33 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 132  Q
    ||||||| |||||| |||||||| ||||| ||||| |||||||||||    |||| ||||||  | ||||||   |||||||| |||||| || || | |    
T  18429314 catcaccgttaaacttggagcttgaagatgaagctcgactttcataacaattttttcccttattctcaccccgt-tcatttcaaattcaatttcaatagt 18429216  T
Q  133 tttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaatta 232  Q
    ||||||| |||||||||||  |||||||| |||| ||||||||        ||| |||||| ||| ||||||||||||||||||||   |||||| ||||    
T  18429215 tttgcttcaagaaattttgtagattttgactttcagattcaatacaaaaaaattcgggtttcaagttttttgaattggggaagaactggaccacttatta 18429116  T
Q  233 ttgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 318  Q
    ||  | ||||||| ||  ||||| || | |||||| || |||||  |||||||||| |||||||||| | ||| |||||| |||||    
T  18429115 ttagaggaaatttaggtgattttagaatatagattgcagattgtgtaattagggtttcaattttatacaattggggaagacagagc 18429030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 33 - 318
Target Start/End: Complemental strand, 45256058 - 45255773
Alignment:
Q  33 catcaccattaaacatggagcttaaagataaagcttgactttcataat--tgcttttgcccttacacccacccctcatcatttcagattcaaattgaaca 130  Q
    |||||||||||||| |||||||| || || ||||| |||||||||||   |  |||| ||| ||  | |||||| | ||||||||||||||| || || |    
T  45256058 catcaccattaaacttggagcttgaaaatgaagctcgactttcataacaattttttttcccatattctcacccc-cttcatttcagattcaatttcaata 45255960  T
Q  131 attttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaat 230  Q
     ||||| || |||||||||||  |||||||  |||| ||||||||        |||||||||| ||| ||||||||||||||||||||   |||||| ||    
T  45255959 gttttgtttcaagaaattttgtggattttggctttcagattcaatacgaaaa-attagggtttcaagttttttgaattggggaagaactggaccacttat 45255861  T
Q  231 tattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 318  Q
    ||||| | ||||||| ||  ||||| || |||||||| || |||||  ||||||||||| ||||||||| | ||| |||||| |||||    
T  45255860 tattggaggaaatttaggtgattttagaatgtagattgcagattgtgtaattagggttcaaattttatacaattggggaagacagagc 45255773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 33 - 299
Target Start/End: Complemental strand, 33851555 - 33851291
Alignment:
Q  33 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 132  Q
    |||||||||||||| |||||||| ||||| ||||| |||||||||||    |||| |||  |  || ||||| | ||||||||||||||| || || | |    
T  33851555 catcaccattaaacttggagcttgaagatgaagctcgactttcataacaattttttcccagattcc-accccccttcatttcagattcaatttcaatagt 33851457  T
Q  133 tttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaatta 232  Q
    ||| ||| |||||||||||  |||||||  |||| ||||||||        |||||||||| ||  ||||||||||||||||||||   |||||| ||||    
T  33851456 ttttcttcaagaaattttgtggattttggctttcagattcaatacaaaaaaattagggtttcaaattttttgaattggggaagaactggaccacttatta 33851357  T
Q  233 ttgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttata 299  Q
    ||| | ||||||| ||  ||||| || |||||||| || |||||  ||||| |||||||||||||||    
T  33851356 ttggaggaaatttaggtgattttagaatgtagattgcagattgtgtaatta-ggttccaattttata 33851291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 2378576 - 2378709
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| ||| |||||||||| ||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  2378576 attagggttttaagttttttgaattagggaagaacattgacatcaattcatgtaagaaatttgggggattttgaactctaggtaacaaattataatatta 2378675  T
Q  284 gggttccaattttatatatttgaggaagaaagag 317  Q
    ||||||||| |||||||||||| |||||||||||    
T  2378676 gggttccaaatttatatatttggggaagaaagag 2378709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 42282135 - 42282268
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||||||| |||||| | | ||  | ||| ||| ||| ||||    
T  42282135 attagggttttaagttttttgaattggggaagaactttggcatcaattcatggaagaaattttggggattttgaattctatgtgacaaattataacatta 42282234  T
Q  284 gggttccaattttatatatttgaggaagaaagag 317  Q
    ||||||||| |||||||||||  |||||||||||    
T  42282235 gggttccaaatttatatatttagggaagaaagag 42282268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 92 - 299
Target Start/End: Original strand, 10380511 - 10380719
Alignment:
Q  92 ttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta-ttaggg 190  Q
    ||||||||||||| ||| |||| |||||||| || || | |||||||| |||||||||||  |||||||  ||||  |||||||        | ||||||    
T  10380511 ttacacccaccccccatgattttagattcaatttcaatagttttgcttcaagaaattttgaggattttggctttcaaattcaatatgaaaaaaattaggg 10380610  T
Q  191 tttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttcc 290  Q
    ||||||| ||||||||||||||||||||   |||| | || |||| | || |||||||  |||||  |||||| |||||| |||||  |||||||||| |    
T  10380611 tttgaagatttttgaattggggaagaactggaccatttataattggaggatattttggagattttaaagtgtaaattacagattgtgtaattagggtttc 10380710  T
Q  291 aattttata 299  Q
    ||| |||||    
T  10380711 aatgttata 10380719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 184 - 318
Target Start/End: Original strand, 610850 - 610984
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  |||||||||||||||| ||| || | | | | | ||| ||| ||| ||||    
T  610850 attagggttttaagttttttgaattggggaagaactttggcatcaattcatgaaagaaattttggggattgtgaactcttggtgacaaattataacatta 610949  T
Q  284 gggttccaattttatatatttgaggaagaaagagc 318  Q
     ||||||||  ||||||||||| ||||||||||||    
T  610950 aggttccaaaattatatatttggggaagaaagagc 610984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 184 - 314
Target Start/End: Original strand, 51686013 - 51686143
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||||||| |||||| | | ||| | ||| ||| ||| ||||    
T  51686013 attagggttttaagttttttgaattggggaagaactttggcatcaattcatggaagaaattttggggattttgaactctaggtgacaaattataacatta 51686112  T
Q  284 gggttccaattttatatatttgaggaagaaa 314  Q
    |||||  || |||||||||||| ||||||||    
T  51686113 gggttagaaatttatatatttggggaagaaa 51686143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 17516608 - 17516741
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| ||| |||||||||| ||||||||| ||  ||  ||||  || ||||||||| | | |||||| | | ||| ||||| ||| ||| ||||    
T  17516608 attagggttttaagttttttgaattagggaagaacattgacatcaattcatggaagaaatttggaggattttgaactctaggttacaaattataacatta 17516707  T
Q  284 gggttccaattttatatatttgaggaagaaagag 317  Q
    | ||||||| |||||||||||| |||||||||||    
T  17516708 gagttccaaatttatatatttggggaagaaagag 17516741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 21350257 - 21350390
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| ||| ||||||||||||||||| || ||  ||  ||||  || ||||||||| ||| |||||  | | ||| | ||| ||| ||| ||||    
T  21350257 attagggttttaagttttttgaattggggaagtacattgacatcaattcatggaagaaatttgggggattttaaactctaggtgacaaattataacatta 21350356  T
Q  284 gggttccaattttatatatttgaggaagaaagag 317  Q
    ||||||||| |||||||||||| |||||||||||    
T  21350357 gggttccaaatttatatatttggggaagaaagag 21350390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 317
Target Start/End: Complemental strand, 30598791 - 30598658
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||  |||||| | | ||| | ||| ||| ||| ||||    
T  30598791 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttgggagattttgaactctaggtgacaaattataacatta 30598692  T
Q  284 gggttccaattttatatatttgaggaagaaagag 317  Q
    ||||||||| |||||||||||| || ||||||||    
T  30598691 gggttccaaatttatatatttggggtagaaagag 30598658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 186 - 318
Target Start/End: Complemental strand, 44268432 - 44268301
Alignment:
Q  186 tagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagg 285  Q
    |||||||| ||| ||||||||||||| |||||| ||  || |||||  || ||||||||| ||| |||||| | | | | | ||| ||| ||| ||||||    
T  44268432 tagggttt-aagttttttgaattgggaaagaacattgacattaattcatggaagaaatttgggggattttgaactctgggtgacaaattataacattagg 44268334  T
Q  286 gttccaattttatatatttgaggaagaaagagc 318  Q
    ||||||| |||||||||||| ||||||||||||    
T  44268333 gttccaaatttatatatttggggaagaaagagc 44268301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 13466609 - 13466655
Alignment:
Q  15 aacattcaagcactctcacatcaccattaaacatggagcttaaagat 61  Q
    |||||||||| ||||||||||||||||||||||| |||||| |||||    
T  13466609 aacattcaagtactctcacatcaccattaaacatagagcttcaagat 13466655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 318
Target Start/End: Complemental strand, 23887622 - 23887489
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||||||  |||||||||||||| |||||   |||||| ||||||| | ||||||||    ||| | ||||||||||| || |||||  |||||    
T  23887622 attagggtttgaaattttttgaattggggcagaactcaaccacttattattggaggaaattttcatgattatagagtgtagattgcagattgtgtaatta 23887523  T
Q  284 gggttccaattttatatatttgaggaagaaagagc 318  Q
    || || |||||||||| | ||| ||||||||||||    
T  23887522 ggatttcaattttatacaattg-ggaagaaagagc 23887489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 318
Target Start/End: Complemental strand, 27897646 - 27897512
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||| ||||| ||| ||||| |||||||||||||| ||  ||  ||||  || |||||||||  || |||||| | | ||| | ||| ||| ||| ||||    
T  27897646 attatggttttaagtttttttaattggggaagaacattgacatcaattcatgtaagaaatttgagggattttgaactctaggtaacaaattataacatta 27897547  T
Q  284 gggttccaattttatatatttgaggaagaaagagc 318  Q
    ||||||||| |||||||||||| ||||||||||||    
T  27897546 gggttccaaatttatatatttggggaagaaagagc 27897512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 184 - 317
Target Start/End: Complemental strand, 23876095 - 23875963
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||| ||||||| |||||||||||||||||||  ||  ||  ||||| || ||||||||||| |||||||| | | || || ||| ||  |||||| |    
T  23876095 attaggttttgaagttttttgaattggggaagaagattgtcatcaattaatggaagaaattttgagaattttgaactcta-atgacaaatgataaaataa 23875997  T
Q  284 gggttccaattttatatatttgaggaagaaagag 317  Q
    ||||||||||||| || ||||  |||||||||||    
T  23875996 gggttccaattttgtagattttgggaagaaagag 23875963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 192 - 317
Target Start/End: Complemental strand, 45897467 - 45897342
Alignment:
Q  192 ttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttcca 291  Q
    |||||| |||||||||||| | |||||   | |||| ||||||| | ||||||||    ||| | ||||||||||| ||||||||  ||||||||||| |    
T  45897467 ttgaagttttttgaattggagcagaactgaagcacttattattggaggaaattttcatgattatagagtgtagattgcatattgtgtaattagggttcta 45897368  T
Q  292 attttatatatttgaggaagaaagag 317  Q
    |||||||| | ||| |||||||||||    
T  45897367 attttatacaattggggaagaaagag 45897342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 391
Target Start/End: Complemental strand, 30501367 - 30501299
Alignment:
Q  323 cattttctacaaatcaattaatttgatccttggaaattttggtcactgtcgaccacattagtctctgct 391  Q
    |||||||| ||||||||| |||||  ||||||||||||||||||||| ||  ||| |||||||| ||||    
T  30501367 cattttctgcaaatcaatcaatttcgtccttggaaattttggtcactatcagccaaattagtctttgct 30501299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 7589540 - 7589470
Alignment:
Q  321 agcattttctacaaatcaattaatttgatccttggaaattttggtcactgtcgaccacattagtctctgct 391  Q
    |||||||||| ||||||||| |||||  || |||||||||||| ||| | ||||||| ||||||| |||||    
T  7589540 agcattttctgcaaatcaatcaattttgtcattggaaattttgatcattatcgaccaaattagtccctgct 7589470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 184 - 318
Target Start/End: Complemental strand, 23292023 - 23291889
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| |||  ||||||||||||||||||| ||  |  |||||  || ||||||||| ||  |||||| | | ||||| ||  ||| ||| ||||    
T  23292023 attagggttttaagtcttttgaattggggaagaacattgacgttaattcatggaagaaatttgggagattttgaactctagatgacgaattataacatta 23291924  T
Q  284 gggttccaattttatatatttgaggaagaaagagc 318  Q
    ||||||||| |||||||||||   |||||||||||    
T  23291923 gggttccaaatttatatatttatagaagaaagagc 23291889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 22218772 - 22218719
Alignment:
Q  8 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagat 61  Q
    ||||| ||||||||||| |||||||||||||||||| |||| || ||| |||||    
T  22218772 ggacaccaacattcaagtactctcacatcaccattagacatagaacttgaagat 22218719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 383
Target Start/End: Original strand, 40963210 - 40963270
Alignment:
Q  323 cattttctacaaatcaattaatttgatccttggaaattttggtcactgtcgaccacattag 383  Q
    |||||||| ||||||||| ||||| ||| |||||||||||||| ||| ||| ||| |||||    
T  40963210 cattttctgcaaatcaatcaatttcatctttggaaattttggttactatcggccaaattag 40963270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 128; Significance: 5e-66; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 14 - 314
Target Start/End: Complemental strand, 11022125 - 11021825
Alignment:
Q  14 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 113  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  ||||| || ||   ||||||||||||||||    
T  11022125 caacattcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgtccatatgaccacccctcatcattt 11022026  T
Q  114 cagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattgggga 213  Q
     |||||||| || |||| |||||||||||  |||||||  |||||||| |||| ||||||||        ||||||||||| |  ||||||| |||||||    
T  11022025 tagattcaatttcaacagttttgcttgaatgaattttgcagattttgattttcagattcaattaaaaaaaattagggtttgcaattttttgatttgggga 11021926  T
Q  214 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaa 313  Q
    ||||||| |||  ||||||||| |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  11021925 agaacgtgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaa 11021826  T
Q  314 a 314  Q
    |    
T  11021825 a 11021825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 14 - 314
Target Start/End: Original strand, 28247674 - 28247974
Alignment:
Q  14 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 113  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||| | ||||||||    
T  28247674 caacattcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacctcccatcattt 28247773  T
Q  114 cagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattgggga 213  Q
     |||||||| || |||| |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| |||||||    
T  28247774 tagattcaatttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgcaattttttgatttgggga 28247873  T
Q  214 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaa 313  Q
    ||||||| |||  ||||||||| |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  28247874 agaacgtgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaa 28247973  T
Q  314 a 314  Q
    |    
T  28247974 a 28247974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 184 - 314
Target Start/End: Original strand, 363354 - 363485
Alignment:
Q  184 attagggtttgaagctttt-tgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatt 282  Q
    |||||||||||||| |||| |||||||| |||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||    
T  363354 attagggtttgaagtttttttgaattggagaagaacgttaccactaattattggaagaaattttgaggattttggagtgtagattacatattgtaaaatt 363453  T
Q  283 agggttccaattttatatatttgaggaagaaa 314  Q
    ||||||||||||||||||||||| ||||||||    
T  363454 agggttccaattttatatatttggggaagaaa 363485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 25 - 314
Target Start/End: Complemental strand, 11313402 - 11313127
Alignment:
Q  25 cactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaat 124  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| || | |  |||||||| ||  |||||||| ||||| ||   |||||| |    
T  11313402 cactctcacatcaccattaaacatggagcttgaagataaagcttgactttgatgactctttttgcccatatgcccacccc-catcagtttctattcaatt 11313304  T
Q  125 tgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttacc 224  Q
    |||||| |||||||||||||||||||||  ||| |   |||||||||||||        || |||||||| || ||||| ||||||||||||||||||||    
T  11313303 tgaacagttttgcttgaagaaattttgggaattctagttttcggattcaataaaaaaaaatgagggtttggagtttttttaattggggaagaacgttacc 11313204  T
Q  225 actaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 314  Q
    |||             |||| |||| ||||||||||||| |||| | |||||||||||||||||| ||||||||||||||| ||||||||    
T  11313203 act-------------aattgtggggattttggagtgtacattaaagattgtaaaattagggttctaattttatatatttggggaagaaa 11313127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 14 - 314
Target Start/End: Original strand, 38149535 - 38149836
Alignment:
Q  14 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 113  Q
    ||||||| ||||| |||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||| | ||||||||    
T  38149535 caacatttaagcattctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacctcccatcattt 38149634  T
Q  114 cagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntatt-agggtttgaagctttttgaattgggg 212  Q
     |||||||| || |||| |||||||||||  |||||||  |||||||  |||| ||||||||        | | ||| |||| |  ||||||| ||||||    
T  38149635 tagattcaatttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaaatcaggatttgcaattttttgatttgggg 38149734  T
Q  213 aagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaaga 312  Q
    || ||||| |||  ||||||||| |||||| |||||  ||||| |||||||||||||| |||||||||||||||||||||||||||||||||| | ||||    
T  38149735 aataacgtgacccttaattattggaagaaaatttggagattttagagtgtagattacacattgtaaaattagggttccaattttatatatttgggaaaga 38149834  T
Q  313 aa 314  Q
    ||    
T  38149835 aa 38149836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 184 - 314
Target Start/End: Original strand, 7744932 - 7745062
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||||| | | ||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||| | ||||||||||||    
T  7744932 attagggtttgaggttatttcaattggggaagaacgttaccactaattattggaagaatttttgggaattttggagtgtggattaaagattgtaaaatta 7745031  T
Q  284 gggttccaattttatatatttgaggaagaaa 314  Q
    ||||| |||||||||| ||||| | ||||||    
T  7745032 gggtttcaattttatacatttgggaaagaaa 7745062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 9 - 316
Target Start/End: Complemental strand, 10715690 - 10715400
Alignment:
Q  9 gacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcat 108  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||             |||||| |||| |  ||||| || ||  |||||||  |||    
T  10715690 gacaccaacattcaagcactctcacagcaccattaaacatggagctt-------------gactttgataactctttttgtccatatgcccacccg-cat 10715605  T
Q  109 catttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaatt 208  Q
    ||||||  |||||| ||||||| ||||||||||||||||||||| |||| |   ||| |||||||||        |||||||||||||| ||||||||||    
T  10715604 catttcgaattcaatttgaacagttttgcttgaagaaattttggggattctagtttttggattcaataaaaaa--attagggtttgaagttttttgaatt 10715507  T
Q  209 ggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgagg 308  Q
    ||| || ||||||||  |||||||| | ||| |||||||||||||||  || |||||||| | |||||||||||||||||||||||||||||||||| ||    
T  10715506 ggg-aacaacgttactgctaattatcggaaggaattttgggaattttttagggtagattaaagattgtaaaattagggttccaattttatatatttgggg 10715408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 17948601 - 17948734
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||||| | | ||| |||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||| ||||| | ||||||||||||    
T  17948601 attagggtttgaggttatttcaattggggaagaacgttaccaccaattattggaagaatttttgggaattttggagtgtggattaaagattgtaaaatta 17948700  T
Q  284 gggttccaattttatatatttgaggaagaaagag 317  Q
    ||||| |||||||||| ||||| | |||||||||    
T  17948701 gggtttcaattttatacatttgggaaagaaagag 17948734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 14 - 318
Target Start/End: Original strand, 37418263 - 37418569
Alignment:
Q  14 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgc-ccttacacccacccctcatcatt 112  Q
    ||||||||||||||||||||| ||||||||||| || ||||  ||||| || || ||||||||||| || ||||   || ||  |||||||| |||||||    
T  37418263 caacattcaagcactctcacaacaccattaaacttgaagctcgaagatgaaactcgactttcataactgttttttttccatattcccaccccccatcatt 37418362  T
Q  113 tcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta-ttagggtttgaagctttttgaattggg 211  Q
    |||||||||| || || | |||||||| |||||| ||||  |||||||  ||||  |||||||        | ||||||||||||| ||||||||||||     
T  37418363 tcagattcaatttcaatagttttgcttcaagaaactttgaggattttggctttcaaattcaatacgaaaaaaattagggtttgaagttttttgaattggc 37418462  T
Q  212 gaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaag 311  Q
    |||||||   |||| | || |||| | || |||||||  ||||| ||||||| ||| || |||||  ||||||||||||||| ||||| | ||| |||||    
T  37418463 gaagaactggaccatttataattggaggatattttggtgattttagagtgtaaattgcagattgtgtaattagggttccaatgttatacaattggggaag 37418562  T
Q  312 aaagagc 318  Q
    |||||||    
T  37418563 aaagagc 37418569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 8 - 314
Target Start/End: Complemental strand, 35881 - 35575
Alignment:
Q  8 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 107  Q
    ||||| ||||||||||||||||||||| ||||||||||| |||||||| ||||| || ||| ||||||||||  | ||||  || ||  ||||| || ||    
T  35881 ggacaccaacattcaagcactctcacaacaccattaaacttggagcttgaagatgaaacttaactttcataaccg-ttttttccatattcccactccaca 35783  T
Q  108 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaat-nnnnnnntattagggtttgaagctttttgaa 206  Q
    ||||||||||||||| || || | |||||||| |||||||||||  |||| ||  |||| |||||| |         |||||||||||||| ||||||||    
T  35782 tcatttcagattcaatttcaatagttttgcttcaagaaattttgaggattctggctttcagattcactacgaaaaaaattagggtttgaagttttttgaa 35683  T
Q  207 ttggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttga 306  Q
    |||||| |||||   |||||| ||||||| | ||||||||    ||| | ||||||| ||| || |||||  ||||| ||||| ||||||||| | |||     
T  35682 ttggggcagaactgaaccacttattattggaggaaattttcatgattatagagtgtatattgcagattgtgtaattaaggttcgaattttatacaattgg 35583  T
Q  307 ggaagaaa 314  Q
    ||||||||    
T  35582 ggaagaaa 35575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 191 - 314
Target Start/End: Complemental strand, 2359516 - 2359394
Alignment:
Q  191 tttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttcc 290  Q
    ||||||| |||| ||||||||||||||||||  ||  ||||| ||| ||||||||||||| ||||||| | ||||| ||| ||||||||||||||||| |    
T  2359516 tttgaagtttttagaattggggaagaacgttgtcatcaattaatgatagaaattttggga-ttttggactctagatgacaaattgtaaaattagggtttc 2359418  T
Q  291 aattttatatatttgaggaagaaa 314  Q
    ||||||||| ||||| ||||||||    
T  2359417 aattttatagatttggggaagaaa 2359394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 14 - 317
Target Start/End: Original strand, 42880309 - 42880610
Alignment:
Q  14 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 113  Q
    |||||||||||||||| ||   ||||||||||| | ||||| |||||| ||||| ||||||||||| || |||| ||| ||  |||| ||| ||| ||||    
T  42880309 caacattcaagcactcgcaa--caccattaaacttagagctcaaagatgaagctcgactttcataactgttttttcccatattcccaacccccatgattt 42880406  T
Q  114 cagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattgggga 213  Q
    | ||||||| || || | |||||||| |||||||||||  |||||||  ||||  ||| |||        |||||||||||||| ||||| |||||||||    
T  42880407 ctgattcaatttcaatagttttgcttcaagaaattttgaggattttggctttcaaatttaatacgaaaaaattagggtttgaagttttttaaattgggga 42880506  T
Q  214 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaa 313  Q
    |||||   |||| | || |||| | || |||||||  ||||| ||||||| ||| || |||||  |||||||||| |||| ||||| | ||| |||||||    
T  42880507 agaactggaccatttataattggaggatattttggtgattttagagtgtaaattgcagattgtgtaattagggtttcaatgttatacaattggggaagaa 42880606  T
Q  314 agag 317  Q
    ||||    
T  42880607 agag 42880610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 318
Target Start/End: Complemental strand, 34400762 - 34400628
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | | | | ||| ||| ||| ||||    
T  34400762 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactctgggtgacaaattataacatta 34400663  T
Q  284 gggttccaattttatatatttgaggaagaaagagc 318  Q
    ||||||||| |||||||||||| ||||||||||||    
T  34400662 gggttccaaatttatatatttggggaagaaagagc 34400628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 318
Target Start/End: Complemental strand, 42518011 - 42517877
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || |||||| || ||| |||||| | | ||| | ||| ||| ||| ||||    
T  42518011 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaaattgggggattttgaactctaggtgacaaattataacatta 42517912  T
Q  284 gggttccaattttatatatttgaggaagaaagagc 318  Q
    ||||||||| |||||||||||| ||||||||||||    
T  42517911 gggttccaaatttatatatttggggaagaaagagc 42517877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 184 - 312
Target Start/End: Original strand, 15373554 - 15373683
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgt-taccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatt 282  Q
    |||||||||| ||| |||||||||||||||||||| |  |||||| ||||||| | ||||||| ||  || || || ||||||||| | |||||  ||||    
T  15373554 attagggttttaagttttttgaattggggaagaacttggaccacttattattggaggaaatttaggtgatattagaatgtagattatagattgtgtaatt 15373653  T
Q  283 agggttccaattttatatatttgaggaaga 312  Q
    ||||||||||||||||| | ||| ||||||    
T  15373654 agggttccaattttatacaattggggaaga 15373683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 57 - 217
Target Start/End: Complemental strand, 40150825 - 40150664
Alignment:
Q  57 aagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttg-cttgaagaaattttggtga 155  Q
    ||||| || ||||||||| | ||||| |||||||| |||  ||||| | |||||||| ||||||||  ||||||||||||  ||||||||||||||  ||    
T  40150825 aagatgaaacttgactttgagaattgtttttgcccatacggccaccacccatcattttagattcaatctgaacaattttgatttgaagaaattttgaaga 40150726  T
Q  156 ttttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaa 217  Q
    ||||| |||| |||||||||        | |||||||||||| |||| |||| |||||||||    
T  40150725 ttttggattttggattcaatgaaaacaaaatagggtttgaagtttttagaataggggaagaa 40150664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 106 - 318
Target Start/End: Original strand, 40152135 - 40152346
Alignment:
Q  106 catcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttga 205  Q
    ||||||||  |||||||  |||||||||||| |||||||||||||   ||||||| ||||||||||||||        |||||||||| ||| |||| ||    
T  40152135 catcattttggattcaatctgaacaattttggttgaagaaattttcaggattttggatttcggattcaatcaaatcaaattagggttttaagtttttaga 40152234  T
Q  206 attggggaagaa--cgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatt 303  Q
    ||||||||||||   |||     |||||| || |||||||| |||  ||||||||  |||||| | | |||| |||||| ||||| |||||||||| |||    
T  40152235 attggggaagaaatggtt---gttaattaatggaagaaattgtggagattttggaccgtagatgagagattgaaaaatttgggtttcaattttatagatt 40152331  T
Q  304 tgaggaagaaagagc 318  Q
    || | ||||||||||    
T  40152332 tgggaaagaaagagc 40152346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 185 - 317
Target Start/End: Original strand, 17697776 - 17697903
Alignment:
Q  185 ttagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattag 284  Q
    ||||||||| ||| ||||||||||||||||||||    |||  | |||| ||| ||||||||||| |||||| | | ||| | ||| ||| ||| |||||    
T  17697776 ttagggttttaagttttttgaattggggaagaac----ccatcatttatggaa-gaaattttggggattttgaactctaggtgacaaattataacattag 17697870  T
Q  285 ggttccaattttatatatttgaggaagaaagag 317  Q
    |||||||| |||||||||||| |||||||||||    
T  17697871 ggttccaaatttatatatttggggaagaaagag 17697903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 184 - 318
Target Start/End: Complemental strand, 19907170 - 19907036
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| ||| |||||||||||| ||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  19907170 attagggttttaagttttttgaattggtgaagaacattgacatcaattcatgtaagaaatttgggggattttgaactctaggtaacaaattataacatta 19907071  T
Q  284 gggttccaattttatatatttgaggaagaaagagc 318  Q
    ||||||| | |||||||||||| ||||||||||||    
T  19907070 gggttccgaatttatatatttggggaagaaagagc 19907036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 33 - 151
Target Start/End: Original strand, 42002990 - 42003108
Alignment:
Q  33 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 132  Q
    |||||||||||||| |||||||| ||||| ||||| |||||||||||  | |||| ||| ||  ||||||||  |||||||||||||  | || || | |    
T  42002990 catcaccattaaacttggagcttgaagatgaagctcgactttcataacagttttttcccatattcccaccccctatcatttcagattttatttcaatagt 42003089  T
Q  133 tttgcttgaagaaattttg 151  Q
    ||||||| |||||||||||    
T  42003090 tttgcttcaagaaattttg 42003108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 184 - 312
Target Start/End: Original strand, 41708097 - 41708225
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| ||| ||||||||||| ||||||||   |||||| ||||| | | ||||||| ||  || || || ||||||||| | |||||  |||||    
T  41708097 attagggttttaagttttttgaattgaggaagaactggaccacttattatgggaggaaatttaggtgatattagaatgtagattatagattgtgtaatta 41708196  T
Q  284 gggttccaattttatatatttgaggaaga 312  Q
    |||||||||||||||| | ||| ||||||    
T  41708197 gggttccaattttatacaattggggaaga 41708225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 298
Target Start/End: Complemental strand, 26581430 - 26581316
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||| ||||||| |||||||||||||||| | ||||  ||  ||||| || |||||||||||||||||||| | | ||| | ||| ||| ||||||||    
T  26581430 attaggttttgaagttttttgaattggggaacagcgttgtcatcaattaatggaagaaattttgggaattttgaactctaggtgacaaattataaaatta 26581331  T
Q  284 gggttccaattttat 298  Q
    || ||| ||| ||||    
T  26581330 ggattctaatcttat 26581316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 237 - 318
Target Start/End: Complemental strand, 16377163 - 16377082
Alignment:
Q  237 aagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 318  Q
    ||||||||| | | |||||| | ||||| | ||| ||| ||| ||||||||||||| |||||||||||| ||||||||||||    
T  16377163 aagaaatttagaggattttgaactgtaggtaacaaattataacattagggttccaaatttatatatttggggaagaaagagc 16377082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 303 - 385
Target Start/End: Original strand, 363509 - 363585
Alignment:
Q  303 ttgaggaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaattttggtcactgtcgaccacattagtc 385  Q
    ||||||||||||||||||| |||||||| ||||||||||       |||||| |||||||||||||| ||| ||| |||||||    
T  363509 ttgaggaagaaagagcaaaacattttctgcaaatcaatt------gtccttgaaaattttggtcactatcggccaaattagtc 363585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 262 - 317
Target Start/End: Original strand, 4047703 - 4047758
Alignment:
Q  262 tagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagag 317  Q
    ||||| ||| ||| ||||||||||||| |||||||||| ||||| |||||||||||    
T  4047703 tagatgacaaattataaaattagggtttcaattttatagatttggggaagaaagag 4047758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 317
Target Start/End: Original strand, 161813 - 161854
Alignment:
Q  276 taaaattagggttccaattttatatatttgaggaagaaagag 317  Q
    ||||||||||||||||| ||| |||||||| |||||||||||    
T  161813 taaaattagggttccaaatttttatatttggggaagaaagag 161854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 317
Target Start/End: Original strand, 2359542 - 2359587
Alignment:
Q  272 attgtaaaattagggttccaattttatatatttgaggaagaaagag 317  Q
    ||||| |||||||||||||||||| ||| ||||| |||||||||||    
T  2359542 attgtcaaattagggttccaatttaatagatttggggaagaaagag 2359587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 184 - 256
Target Start/End: Complemental strand, 14387837 - 14387765
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttg 256  Q
    |||||||||  ||| |||||||||||||||||||  ||  ||  |||||||| ||||||||||||| ||||||    
T  14387837 attagggttctaagttttttgaattggggaagaaaattgacatcaattattggaagaaattttggggattttg 14387765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 184 - 312
Target Start/End: Original strand, 31474719 - 31474847
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| | | ||||||||||||| |||| | ||  ||||||||  || ||||||| ||| | |||||| | |  || | ||| ||| ||| ||||    
T  31474719 attagggttttaggttttttgaattgggaaagatctttgtcactaattcatggaagaaatcttgaggattttgaactcaaggtcacaaattataatatta 31474818  T
Q  284 gggttccaattttatatatttgaggaaga 312  Q
    ||||||||| |||||||||||| ||||||    
T  31474819 gggttccaaatttatatatttggggaaga 31474847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 128; Significance: 5e-66; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 14 - 314
Target Start/End: Original strand, 5784366 - 5784666
Alignment:
Q  14 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 113  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  ||||| || ||   ||||||||||||||||    
T  5784366 caacattcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgtccatatgaccacccctcatcattt 5784465  T
Q  114 cagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattgggga 213  Q
     |||||||| || |||| |||||||||||  |||||||  |||||||| |||| ||||||||        ||||||||||| |  ||||||| |||||||    
T  5784466 tagattcaatttcaacagttttgcttgaatgaattttgcagattttgattttcagattcaattaaaaaaaattagggtttgcaattttttgatttgggga 5784565  T
Q  214 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaa 313  Q
    ||||||| |||  ||||||||| |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  5784566 agaacgtgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaa 5784665  T
Q  314 a 314  Q
    |    
T  5784666 a 5784666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 8 - 317
Target Start/End: Complemental strand, 42558546 - 42558248
Alignment:
Q  8 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 107  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||  | ||| |||| || |||||||| ||| |||||| | ||    
T  42558546 ggacaccaacattcaagcactctcacatcaccattaaacatggagcttgaagatgaagctcaaatttgataactgattttgcccatacgcccaccaccca 42558447  T
Q  108 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaat 207  Q
    |||||||||||||||  ||||||||| |||||||||||||||||  ||||||| |||| |||||||||        |||||||||||||| |||| ||||    
T  42558446 tcatttcagattcaatctgaacaattatgcttgaagaaattttgcggattttggattttggattcaatcaaaaga-attagggtttgaagtttttagaat 42558348  T
Q  208 tggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgag 307  Q
    |||| ||||||||   || |||||| || ||||| ||||||  |          ||||| ||| ||||||||||||||||||||||||| || ||||| |    
T  42558347 tgggaaagaacgtcgtcattaattaatggaagaatttttggaga----------tagatgacagattgtaaaattagggttccaattttctagatttggg 42558258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 84 - 314
Target Start/End: Original strand, 51123115 - 51123342
Alignment:
Q  84 ttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnt 183  Q
    |||||||| |||||||||||| ||||||||||||||||| |  |||| ||||  |||||| |||||||| ||||||    ||||||||||||            
T  51123115 ttttgcccatacacccacccc-catcatttcagattcaattacaacagttttatttgaaggaattttggggattttttgattcggattcaatcaaaaa-- 51123211  T
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||||| | | ||| |||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||| |||||   ||||||||||||    
T  51123212 attagggtttgaggttatttcaattggggaagaacgttacctctaattattggaagaatttttgggaattttggagtgtggattaatgattgtaaaatta 51123311  T
Q  284 gggttccaattttatatatttgaggaagaaa 314  Q
    |||||||||||||||| ||||||||||||||    
T  51123312 gggttccaattttatacatttgaggaagaaa 51123342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 14 - 314
Target Start/End: Complemental strand, 11153136 - 11152837
Alignment:
Q  14 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 113  Q
    ||||| ||||||| |||||||||||||||||||||||||  | ||||| ||| |||||||| |||  |  |||||||| ||   ||||||| ||||||||    
T  11153136 caacactcaagcattctcacatcaccattaaacatggaggatgaagatgaagtttgactttgatagctctttttgcccatatgaccacccc-catcattt 11153038  T
Q  114 cagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattgggga 213  Q
     |||||||| || |||| |||||||||||  |||||||  ||||||   |||| ||||||||        ||||||||||| |  ||||||| |||||||    
T  11153037 tagattcaatttcaacagttttgcttgaatgaattttgcagattttagttttcagattcaattaaaaaaaattagggtttgcaattttttgatttgggga 11152938  T
Q  214 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaa 313  Q
    ||||| | |||  ||||||||| |||||| |||||  |||||||||||||||||| | |||||||||||||||||||||||||||| ||||| |||||||    
T  11152937 agaacatgacccttaattattggaagaaaatttggagattttggagtgtagattaaacattgtaaaattagggttccaattttatacatttggggaagaa 11152838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 184 - 301
Target Start/End: Original strand, 25172701 - 25172818
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||||||  ||||| ||||||||||||||||||||||||||||||| ||||||||||||  ||||||||| ||| |||| | ||||||||||||    
T  25172701 attagggtttgaatttttttaaattggggaagaacgttaccactaattattggaagaaattttggagattttggagcgtacattaaagattgtaaaatta 25172800  T
Q  284 gggttccaattttatata 301  Q
    |||||| |||||||||||    
T  25172801 gggttctaattttatata 25172818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 8 - 318
Target Start/End: Original strand, 31803190 - 31803500
Alignment:
Q  8 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 107  Q
    ||||| ||||||||||||||||||||| ||| ||||||| |||||||| ||||| || ||||||||||||||  | ||||  || ||  |||||||| ||    
T  31803190 ggacaccaacattcaagcactctcacaacactattaaacttggagcttgaagatgaaacttgactttcataaccg-ttttttccatattcccaccccaca 31803288  T
Q  108 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaat-nnnnnnntattagggtttgaagctttttgaa 206  Q
    ||||||||||||||| || || | |||||||| |||||||||||  |||| ||  |||| |||||| |         |||||||||||||| ||||||||    
T  31803289 tcatttcagattcaatttcaatagttttgcttcaagaaattttgaggattctggctttcagattcactacgaaaaaaattagggtttgaagttttttgaa 31803388  T
Q  207 ttggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttga 306  Q
    |||||| |||||   |||||| ||||||| | ||||||||    ||| | ||||||||||| || |||||  |||||  |||||||||||||| | |||     
T  31803389 ttggggcagaactgaaccacttattattggaggaaattttcatgattatagagtgtagattgcagattgtgtaattaacgttccaattttatacaattgg 31803488  T
Q  307 ggaagaaagagc 318  Q
    ||||||||||||    
T  31803489 ggaagaaagagc 31803500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 8 - 318
Target Start/End: Complemental strand, 46637365 - 46637056
Alignment:
Q  8 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 107  Q
    ||||| ||||||||||||||||||||| ||||||||||| |||||||| ||||| |||||||||||||||||  | ||||  || ||  |||||||| ||    
T  46637365 ggacaccaacattcaagcactctcacaacaccattaaacttggagcttgaagatgaagcttgactttcataaccg-ttttttccatattcccaccccaca 46637267  T
Q  108 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaat-nnnnnnntattagggtttgaagctttttgaa 206  Q
    |||||| |||||||| || || | |||||||| |||||||||||  |||| ||  ||||  ||||| |         |||||||||||||| ||||||||    
T  46637266 tcattttagattcaatttcaatagttttgcttcaagaaattttgaggattctggctttcaaattcactacgaaaaaaattagggtttgaagttttttgaa 46637167  T
Q  207 ttggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttga 306  Q
    |||||| |||||   |||||| ||||||| | ||||||||    ||| | ||||||||||| || |||||  ||||| ||||||||||||||| | |||     
T  46637166 ttggggtagaactgaaccacttattattggaggaaattttcatgattatagagtgtagattgcagattgtgtaattaaggttccaattttata-aattgg 46637068  T
Q  307 ggaagaaagagc 318  Q
    ||||||||||||    
T  46637067 ggaagaaagagc 46637056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 33 - 318
Target Start/End: Complemental strand, 45379658 - 45379374
Alignment:
Q  33 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 132  Q
    ||||||| |||||| |||||||||||||| ||||| |||||||||||    |||| ||| ||  |||||||| | ||||||||||||||| || || | |    
T  45379658 catcaccgttaaacttggagcttaaagatgaagctcgactttcataacaattttttcccatattcccacccc-cttcatttcagattcaatttcaatagt 45379560  T
Q  133 tttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaatta 232  Q
    ||||||| |||||||||||  |||||||  |||| ||||||||        |||||||||| ||| ||| ||||||||||||||||   |||||| ||||    
T  45379559 tttgcttcaagaaattttgtggattttggctttcagattcaatacaaaaaaattagggtttcaagttttctgaattggggaagaactagaccacttatta 45379460  T
Q  233 ttgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 318  Q
    ||| | ||||||| ||  ||||| || |||||||| || |||||  ||||||||||| ||||||||| | ||| |||||| |||||    
T  45379459 ttggaggaaatttaggtgattttagaatgtagattgcaaattgtgtaattagggttctaattttatacaattggggaagacagagc 45379374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 33 - 312
Target Start/End: Original strand, 44158807 - 44159088
Alignment:
Q  33 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 132  Q
    |||||||||||||| || ||||| ||||| ||||| ||||||||||| |  |||| ||| ||  |||||||| | ||||||||||||||| || || | |    
T  44158807 catcaccattaaacttgaagcttgaagatgaagctcgactttcataactattttttcccataatcccaccccccttcatttcagattcaatttcaatagt 44158906  T
Q  133 tttgcttgaagaaattttggtgattttgaatttcggattcaat--nnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaat 230  Q
    ||||||| |||||||||||  |||||||  |||| ||||||||          |||||||||| ||| |||||||||||||||||||| | |||||| ||    
T  44158907 tttgcttcaagaaattttgtggattttggctttcagattcaatacgaaaaaaaattagggtttcaagttttttgaattggggaagaacttgaccacttat 44159006  T
Q  231 tattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaaga 312  Q
    ||||| | ||||||| ||  ||||| || |||||||| || |||||  ||| |||||| |||||||||| | ||| ||||||    
T  44159007 tattggaggaaatttaggtgattttagaatgtagattgcagattgtgtaatcagggtttcaattttatacaattggggaaga 44159088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 33 - 318
Target Start/End: Original strand, 42135761 - 42136045
Alignment:
Q  33 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 132  Q
    |||||||||||||| |||||||| ||||| ||||| |||||||||||    |||| ||| ||  |||||||| | ||||||||||||||| || || | |    
T  42135761 catcaccattaaacttggagcttgaagatgaagctcgactttcataacaattttttcccatattcccaccccccttcatttcagattcaatttcaatagt 42135860  T
Q  133 tttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaatta 232  Q
    ||||||| |||||||||||   ||||||| |||| ||||||||        |||| ||||| ||| ||||||||||||||||||||   | |||| ||||    
T  42135861 tttgcttcaagaaattttgtgaattttgactttcagattcaatacgaaaaaatta-ggtttcaagttttttgaattggggaagaactggagcacttatta 42135959  T
Q  233 ttgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 318  Q
    ||| |  |||||| ||  ||||| || |||||||| || |||||  ||||||| ||||||||||||| | ||| |||||| |||||    
T  42135960 ttggagaaaatttaggtgattttagaatgtagattgcagattgtgtaattaggattccaattttatacaattggggaagatagagc 42136045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 186 - 318
Target Start/End: Original strand, 6576774 - 6576906
Alignment:
Q  186 tagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagg 285  Q
    |||||||||||| ||||||||||||| || |||   |||||| ||||||| | ||||||| ||  ||||| ||||||||||| || |||||  |||||||    
T  6576774 tagggtttgaagttttttgaattgggaaaaaactggaccacttattattggaggaaatttaggtgattttagagtgtagattgcagattgtttaattagg 6576873  T
Q  286 gttccaattttatatatttgaggaagaaagagc 318  Q
    |||||||||||||| | ||| ||||||||||||    
T  6576874 gttccaattttatacaattggggaagaaagagc 6576906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 18183205 - 18183063
Alignment:
Q  8 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 107  Q
    ||||| ||||||||||||  ||||||||||||||||||| |||||||| ||||| || || ||||||||||| || |||| ||| |   |||||||| ||    
T  18183205 ggacaccaacattcaagctttctcacatcaccattaaacttggagcttgaagatgaaactcgactttcataactgttttttcccatgttcccacccc-ca 18183107  T
Q  108 tcatttcagattcaaattgaacaattttgcttgaagaaattttg 151  Q
    ||||||||||| ||| || || | |||||||| |||||||||||    
T  18183106 tcatttcagatccaatttcaatagttttgcttcaagaaattttg 18183063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 33 - 318
Target Start/End: Complemental strand, 35478660 - 35478378
Alignment:
Q  33 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 132  Q
    |||||||||||||| || ||||| ||||| ||||| |||||||||||    |||| ||| ||  |||||||| ||||||||  ||||  | || || | |    
T  35478660 catcaccattaaacttgaagcttcaagatgaagctcgactttcataacaattttttcccatattcccaccccccatcattttggattttatttcaatagt 35478561  T
Q  133 tttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaatta 232  Q
    ||||||| ||||| |||||  |||||||  |||  ||||||||        |||||||||||||| |||||||||||||||| |||   |||||| ||||    
T  35478560 tttgcttcaagaagttttgaggattttggttttaagattcaatacgaaaaaattagggtttgaagttttttgaattggggaaaaactaaaccacttatta 35478461  T
Q  233 ttgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 318  Q
    ||| | ||||||| ||  ||||| ||||||||||   | |||||  |||||||||| |||||||| | | ||||||||||||||||    
T  35478460 ttggaggaaatttaggtgattttagagtgtagat---agattgtgtaattagggtttcaattttaaacaattgaggaagaaagagc 35478378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 184 - 318
Target Start/End: Complemental strand, 50554634 - 50554500
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| ||| ||| | ||| ||| ||| ||||    
T  50554634 attagggttttaagttttttgaattggggaagaacattgacatcaattcatgtaagaaatttgggggattttgaagtctaggtaacaaattataacatta 50554535  T
Q  284 gggttccaattttatatatttgaggaagaaagagc 318  Q
    ||||||||| |||||||||||| ||||||||||||    
T  50554534 gggttccaaatttatatatttggggaagaaagagc 50554500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 187 - 318
Target Start/End: Complemental strand, 33679680 - 33679549
Alignment:
Q  187 agggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattaggg 286  Q
    ||||||||||| ||||||||||||||||||||   || | | ||||||| | ||||||| ||  ||||| ||||||| ||| || |||||  ||||||||    
T  33679680 agggtttgaagttttttgaattggggaagaactggactagttattattggaggaaatttaggtgattttagagtgtatattgcagattgtgtaattaggg 33679581  T
Q  287 ttccaattttatatatttgaggaagaaagagc 318  Q
    |||||||||| || | ||||||||||||||||    
T  33679580 ttccaattttgtacaattgaggaagaaagagc 33679549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 184 - 318
Target Start/End: Complemental strand, 31237273 - 31237139
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||| || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  31237273 attagggttttaagttttttgaattggggaagaacattgacatcaattaatggaagaaatttgggggattttgaactctaggtaacaaattataacatta 31237174  T
Q  284 gggttccaattttatatatttgaggaagaaagagc 318  Q
    |||||||||  ||||||||||| ||||||||||||    
T  31237173 gggttccaaaattatatatttggggaagaaagagc 31237139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 184 - 317
Target Start/End: Complemental strand, 18058254 - 18058121
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||| ||||||| |||| |||||||||||||| |||  ||  ||||| |  ||||| ||||| | |||||| | | ||||| ||| ||||||||||||    
T  18058254 attaggttttgaagtttttagaattggggaagaatgttgtcatcaattaattgaagaagttttgaggattttgaactctagatgacaaattgtaaaatta 18058155  T
Q  284 gggttccaattttatatatttgaggaagaaagag 317  Q
     ||||||||||||||| ||||| |||||||||||    
T  18058154 aggttccaattttataaatttggggaagaaagag 18058121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 314
Target Start/End: Original strand, 15105986 - 15106116
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||||||| |||||| | ||||| | ||  ||| ||| ||||    
T  15105986 attagggttttaagttttttgaattggggaagaactttggcatcaattcatgtaagaaattttggggattttgaactgtaggtgacgaattataacatta 15106085  T
Q  284 gggttccaattttatatatttgaggaagaaa 314  Q
    || |||||| |||||||||||| ||||||||    
T  15106086 ggattccaaatttatatatttggggaagaaa 15106116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 184 - 317
Target Start/End: Complemental strand, 6817333 - 6817200
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| |||  ||||||||||||||||||| ||  ||  ||||  || |||||||||| ||||||||| | | ||| | ||| ||| ||| ||||    
T  6817333 attagggttttaagtcttttgaattggggaagaacattgacatcaattcatggaagaaattttaggaattttgaactctaggtaacaaattataacatta 6817234  T
Q  284 gggttccaattttatatatttgaggaagaaagag 317  Q
    |||||| || |||||||||||| |||||||||||    
T  6817233 gggttctaaatttatatatttggggaagaaagag 6817200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 185 - 267
Target Start/End: Complemental strand, 18180900 - 18180818
Alignment:
Q  185 ttagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagatt 267  Q
    ||||||||||||| |||||||||||||||||||    |||||| |||| || | ||||||||||  |||||||||||||||||    
T  18180900 ttagggtttgaagttttttgaattggggaagaatcggaccacttattactggaggaaattttggtgattttggagtgtagatt 18180818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 317
Target Start/End: Complemental strand, 45045365 - 45045232
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||  | | | ||| ||| ||||    
T  45045365 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactctatgtgataaattataacatta 45045266  T
Q  284 gggttccaattttatatatttgaggaagaaagag 317  Q
    ||||||||| |||||||||||| |||||||||||    
T  45045265 gggttccaaatttatatatttggggaagaaagag 45045232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 184 - 299
Target Start/End: Original strand, 27952167 - 27952282
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| ||| ||||||||||||||||||||   |||||| ||||||| | |||||||  |  || || || ||||||||| | |||||  |||||    
T  27952167 attagggttttaagttttttgaattggggaagaactggaccacttattattggaggaaatttaagtgatattagaatgtagattaaaaattgtgtaatta 27952266  T
Q  284 gggttccaattttata 299  Q
    ||||| ||||||||||    
T  27952267 gggttacaattttata 27952282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 318
Target Start/End: Original strand, 2870712 - 2870845
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  2870712 attagggttttaag-tttttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactctaggtgacaaattataacatta 2870810  T
Q  284 gggttccaattttatatatttgaggaagaaagagc 318  Q
    ||||||||| || ||||||||| | ||||||||||    
T  2870811 gggttccaaattgatatatttgggaaagaaagagc 2870845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 318
Target Start/End: Complemental strand, 3012309 - 3012175
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| |   |||||| | | ||| | ||| |||  || ||||    
T  3012309 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttggtagattttgaactataggtgacaaattagaacatta 3012210  T
Q  284 gggttccaattttatatatttgaggaagaaagagc 318  Q
    ||||||||| |||||||||||| ||||||||||||    
T  3012209 gggttccaaatttatatatttggggaagaaagagc 3012175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 151
Target Start/End: Complemental strand, 33679814 - 33679696
Alignment:
Q  33 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 132  Q
    |||||||||||||| |||||||| ||||| ||||| |||||||||||  | |||| ||  ||  |||||||| ||||||||| ||||  | || || | |    
T  33679814 catcaccattaaacttggagcttgaagatgaagctcgactttcataacagttttttcctatattcccaccccccatcatttcggattttatttcaatagt 33679715  T
Q  133 tttgcttgaagaaattttg 151  Q
    ||||||| |||||||||||    
T  33679714 tttgcttcaagaaattttg 33679696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 391
Target Start/End: Original strand, 25172876 - 25172944
Alignment:
Q  323 cattttctacaaatcaattaatttgatccttggaaattttggtcactgtcgaccacattagtctctgct 391  Q
    |||||||| ||||||||| || ||  ||||||||||||||||||||| |||  || |||||||||||||    
T  25172876 cattttctgcaaatcaatcaaattcgtccttggaaattttggtcactatcggtcaaattagtctctgct 25172944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 276 - 314
Target Start/End: Complemental strand, 33599580 - 33599542
Alignment:
Q  276 taaaattagggttccaattttatatatttgaggaagaaa 314  Q
    ||||||||||||||||| |||||||||||| ||||||||    
T  33599580 taaaattagggttccaaatttatatatttgtggaagaaa 33599542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 124; Significance: 1e-63; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 14 - 314
Target Start/End: Original strand, 39922506 - 39922806
Alignment:
Q  14 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 113  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  | ||||||||| ||   ||||| | ||||||||    
T  39922506 caacattcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctccttttgcccatatgaccacctcccatcattt 39922605  T
Q  114 cagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattgggga 213  Q
     |||||||| || |||| |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| |||||||    
T  39922606 tagattcaatttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgtaattttttgatttgggga 39922705  T
Q  214 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaa 313  Q
    ||||||| |||  ||||||||| |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  39922706 agaacgtgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaa 39922805  T
Q  314 a 314  Q
    |    
T  39922806 a 39922806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 14 - 314
Target Start/End: Original strand, 39084651 - 39084951
Alignment:
Q  14 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 113  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||| | ||||||||    
T  39084651 caacattcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacctcccatcattt 39084750  T
Q  114 cagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattgggga 213  Q
     |||||||| || |||| |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| |||||||    
T  39084751 tagattcaatttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgtaattttttgatttgggga 39084850  T
Q  214 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaa 313  Q
    ||||||| |||  ||||||||| |||||| |||||  |||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||    
T  39084851 agaacgtgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagagttccaattttatatatttggggaagaa 39084950  T
Q  314 a 314  Q
    |    
T  39084951 a 39084951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 14 - 314
Target Start/End: Original strand, 39190318 - 39190618
Alignment:
Q  14 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 113  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||| | ||||||||    
T  39190318 caacattcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacctcccatcattt 39190417  T
Q  114 cagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattgggga 213  Q
     |||||||| || || | |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| |||||||    
T  39190418 tagattcaatttcaatagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgcaattttttgatttgggga 39190517  T
Q  214 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaa 313  Q
    ||||||| |||  ||||||||| |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  39190518 agaacgtgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaa 39190617  T
Q  314 a 314  Q
    |    
T  39190618 a 39190618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 14 - 314
Target Start/End: Complemental strand, 42879876 - 42879576
Alignment:
Q  14 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 113  Q
    |||||||||| ||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||| | ||||||||    
T  42879876 caacattcaatcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacctcccatcattt 42879777  T
Q  114 cagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattgggga 213  Q
     |||||||| || |||| |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| |||||||    
T  42879776 tagattcaatttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgcaattttttgatttgggga 42879677  T
Q  214 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaa 313  Q
    ||||||| |||  ||||||||| |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  42879676 agaacgtgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaa 42879577  T
Q  314 a 314  Q
    |    
T  42879576 a 42879576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 14 - 314
Target Start/End: Complemental strand, 43778979 - 43778681
Alignment:
Q  14 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 113  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  | ||||||||| ||   ||||| | ||||||||    
T  43778979 caacattcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctccttttgcccatatgaccacctcccatcattt 43778880  T
Q  114 cagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattgggga 213  Q
     |||||||| || |||| |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| |||||||    
T  43778879 tagattcaatttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaa-attagggtttgcaattttttga-ttgggga 43778782  T
Q  214 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaa 313  Q
    ||||||| |||  ||||||||| |||||| |||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||    
T  43778781 agaacgtgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggcgaagaa 43778682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 14 - 314
Target Start/End: Original strand, 5485551 - 5485851
Alignment:
Q  14 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 113  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||  |||||||||||| |||  |  |||||||| ||   || || | ||||||||    
T  5485551 caacattcaagcactctcacatcaccattaaacatggaggatgaagacgaagcttgactttgatagctctttttgcccatatgaccgcctcccatcattt 5485650  T
Q  114 cagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattgggga 213  Q
     |||||||| || |||| |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| |||||||    
T  5485651 tagattcaatttcaacatttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgtaattttttgatttgggga 5485750  T
Q  214 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaa 313  Q
    ||||||| |||  ||||||||| |||||| |||||  |||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||    
T  5485751 agaacgtgacccttaattattggaagaaaatttggagattttggagtgtagattacacatggtaaaattagggttccaattttatatatttggggaagaa 5485850  T
Q  314 a 314  Q
    |    
T  5485851 a 5485851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 15 - 314
Target Start/End: Complemental strand, 44993399 - 44993100
Alignment:
Q  15 aacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttc 114  Q
    |||||||||||||| |||||||||||||||||||||||  | ||||| || ||||||||| |||  |  |||||||| ||   ||||| | ||||||||     
T  44993399 aacattcaagcactttcacatcaccattaaacatggaggatgaagatgaaacttgactttgatagctctttttgcccatatgaccacctcccatcatttt 44993300  T
Q  115 agattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaa 214  Q
    |||||||| || |||| |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| ||||||||    
T  44993299 agattcaatttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgcaattttttgatttggggaa 44993200  T
Q  215 gaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 314  Q
    |||||| |||  ||||||||| |||||| ||||   |||||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||    
T  44993199 gaacgtgacccttaattattggaagaaaatttgaagattttggagtgtagattacacattgtaaaattaggattccaattttatatatttggggaagaaa 44993100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 184 - 313
Target Start/End: Complemental strand, 13438275 - 13438146
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| | ||||||||||||    
T  13438275 attagggtttgaagttttttgaattggggaagaaagttaccactaattattggaagaaattttgggaattttggagtgtacattaaagattgtaaaatta 13438176  T
Q  284 gggttccaattttatatatttgaggaagaa 313  Q
    ||||| | |||||||||||||| |||||||    
T  13438175 gggtttctattttatatatttggggaagaa 13438146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 14 - 314
Target Start/End: Original strand, 32653130 - 32653430
Alignment:
Q  14 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 113  Q
    |||||||| ||||||||||||||||||||||||||| ||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||||| | ||||||    
T  32653130 caacattcgagcactctcacatcaccattaaacatgaaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacccc-cttcattt 32653228  T
Q  114 cagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta-ttagggtttgaagctttttgaattgggg 212  Q
     |||||||| || |||| |||||||||||  |||||||  |||||||  ||||  |||||||        | |||||||||| |  ||||||| ||||||    
T  32653229 tagattcaatttcaacagttttgcttgaatgaattttgcagattttggttttcatattcaattaaaaaaaaattagggtttgtaattttttgatttgggg 32653328  T
Q  213 aagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaaga 312  Q
    |||||| | |||  ||||||||| |||||| |||||  |||||||||||||||||||| ||||||||||||| ||| |||||||||||||||  ||||||    
T  32653329 aagaacatgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagagtttcaattttatatattttgggaaga 32653428  T
Q  313 aa 314  Q
    ||    
T  32653429 aa 32653430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 118 - 303
Target Start/End: Original strand, 25994708 - 25994897
Alignment:
Q  118 ttcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta----ttagggtttgaagctttttgaattgggga 213  Q
    ||||| ||||||| ||||||||||||||||||||| |||| ||  |||||||||||||        |    | |||||||| || ||||||||||| |||    
T  25994708 ttcaatttgaacagttttgcttgaagaaattttggggattctggttttcggattcaataaaaaaaaaaaaatcagggtttggagttttttgaattgagga 25994807  T
Q  214 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatt 303  Q
    |||| ||||||||||||||||| ||||||||||| | |||||||||||||||||||| |||||||| |||| ||||||||||||||||||    
T  25994808 agaatgttaccactaattattggaagaaattttgaggattttggagtgtagattacagattgtaaatttagagttccaattttatatatt 25994897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 184 - 314
Target Start/End: Complemental strand, 230869 - 230740
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||||||  |||||||||| || ||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||| ||||||||||||    
T  230869 attagggtttgaaattttttgaattagg-aagaacgttaccactaattattggaagaaattttggggactttggagtgtagattacagattgtaaaatta 230771  T
Q  284 gggttccaattttatatatttgaggaagaaa 314  Q
    || | |||||||||||||||||  |||||||    
T  230770 ggatgccaattttatatatttggagaagaaa 230740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 8 - 318
Target Start/End: Original strand, 4519959 - 4520270
Alignment:
Q  8 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 107  Q
    ||||| ||||||||||||||| | ||||||||||||||| |||||||| ||||| ||||| ||||||||||| || |||| ||| ||   ||||||| ||    
T  4519959 ggacaccaacattcaagcactttgacatcaccattaaacttggagcttgaagatgaagctcgactttcataactgttttttcccatatttccacccc-ca 4520057  T
Q  108 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaat--nnnnnnntattagggtttgaagctttttga 205  Q
    |||||||| |||||  || || | |||||||| |||||||||||  |||||||  |||| ||||||||          |||||||||| ||| |||||||    
T  4520058 tcatttcatattcattttcaatagttttgcttcaagaaattttgaggattttggctttcagattcaatacaaaaaaaaattagggtttcaagttttttga 4520157  T
Q  206 attggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttg 305  Q
    ||||| |||||||   |||||| |||||   | ||||||||||  ||||| ||||||||||| || ||| |  ||||||||||||||||||||||| |||    
T  4520158 attggagaagaactgaaccacttattatcagaggaaattttggtgattttagagtgtagattgcaaattttgtaattagggttccaattttatataattg 4520257  T
Q  306 aggaagaaagagc 318  Q
      |||||||||||    
T  4520258 gcgaagaaagagc 4520270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 33 - 299
Target Start/End: Complemental strand, 44557183 - 44556917
Alignment:
Q  33 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 132  Q
    |||||||||||||| |||||||  ||||| ||||| |||||||||||  | |||| ||| ||  |||||||||||||||||  ||||  | || || | |    
T  44557183 catcaccattaaacttggagctagaagatgaagctcgactttcataacagttttttcccatattcccacccctcatcattttggattttatttcaatagt 44557084  T
Q  133 tttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaatta 232  Q
    ||||||| ||||| |||||  |||||||  |||  ||||||||        |||||||||||||| ||||||||||||||||||||   |||||| ||||    
T  44557083 tttgcttcaagaatttttgaggattttggttttaagattcaatacgaaaaaattagggtttgaagttttttgaattggggaagaactggaccacttatta 44556984  T
Q  233 ttgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttata 299  Q
    ||| | ||||||| ||  ||||| ||||||||||| || |||||  ||||||  |||||||||||||    
T  44556983 ttggaggaaatttaggtgattttagagtgtagattgcagattgtgtaattagaattccaattttata 44556917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 185 - 257
Target Start/End: Original strand, 39294553 - 39294625
Alignment:
Q  185 ttagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttgg 257  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  39294553 ttagggtttgaagttttttgaattggggaagaacgttaccactaattattggaagaaattttggggattttgg 39294625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 34 - 318
Target Start/End: Original strand, 27626246 - 27626530
Alignment:
Q  34 atcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaatt 133  Q
    ||||||||||||| |||||||| ||||| ||||| |||||||||||  | ||||  || ||  |||||||| ||||||||  ||||  | || || | ||    
T  27626246 atcaccattaaacttggagcttgaagatgaagctcgactttcataacagttttttgccatattcccaccccccatcattttggattttatttcaatagtt 27626345  T
Q  134 ttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaattat 233  Q
    |||||| |||||||||||  |||||||  |||  ||||||||        |||||||||||||| |||||||||||||||||||    |||||| |||||    
T  27626346 ttgcttcaagaaattttgaggattttggttttaagattcaatacgaaaaaattagggtttgaagttttttgaattggggaagaattggaccacttattat 27626445  T
Q  234 tgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 318  Q
    || | |||||||     ||||| |||||||||||  | |||||  ||||||||||||||||||||| | ||| ||||||||||||    
T  27626446 tggaggaaatttaaatgattttagagtgtagattgtagattgtgtaattagggttccaattttatacaattggggaagaaagagc 27626530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 28 - 317
Target Start/End: Complemental strand, 51041314 - 51041027
Alignment:
Q  28 tctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattga 127  Q
    ||||||||||||||||||| |||||||| ||||| || || ||||||||||| || |||| ||| ||  |||||||  |||||||||| |||||| || |    
T  51041314 tctcacatcaccattaaacttggagcttgaagatgaaactcgactttcataactgttttttcccatattcccaccc--catcatttcatattcaatttca 51041217  T
Q  128 acaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccact 227  Q
    | | |||||||| ||    |||||  |||||||| |||| ||||||||         ||||||||||||| ||| ||||| ||||||||||   ||||||    
T  51041216 atagttttgcttcaaatttttttgaggattttgactttcagattcaatgcgaaaaagttagggtttgaagatttatgaataggggaagaaccgaaccact 51041117  T
Q  228 aattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagag 317  Q
     ||||  | | |||||  |||  |||||||| |||||||| || |||||  |||||||||| |||||||||| | ||| |||||||||||    
T  51041116 tattaccggaggaaatcatggtgattttggaatgtagattgcagattgtgtaattagggttacaattttatacaattggggaagaaagag 51041027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 204 - 316
Target Start/End: Complemental strand, 28100977 - 28100865
Alignment:
Q  204 gaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatt 303  Q
    ||||||||||||||||||  ||  ||||| || |||||||||||||||||||||| | ||||||| | |||||| |||||| ||| |||||||||| |||    
T  28100977 gaattggggaagaacgttgtcatcaattaatggaagaaattttgggaattttggactctagattataaattgtacaattagagtttcaattttatagatt 28100878  T
Q  304 tgaggaagaaaga 316  Q
    || ||||||||||    
T  28100877 tggggaagaaaga 28100865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 184 - 316
Target Start/End: Original strand, 13449984 - 13450107
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||||||| ||||||||||||||||||| ||||  | ||||||||| ||||         |||||||||||||| |||| | ||||||||||||    
T  13449984 attagggtttgaagttttttgaattggggaagaatgttaaaaataattattggaaga---------aattttggagtgtacattaaagattgtaaaatta 13450074  T
Q  284 gggttccaattttatatatttgaggaagaaaga 316  Q
    ||||| |||||||||| |||||  |||||||||    
T  13450075 gggtttcaattttatacatttggtgaagaaaga 13450107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 184 - 318
Target Start/End: Complemental strand, 2691818 - 2691684
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| ||| |||||||||||||||||||  ||  ||  ||||| || ||||||||||||  |||||| | | ||| | ||| ||| ||| ||||    
T  2691818 attagggttttaagttttttgaattggggaagaattttgtcatcaattaatggaagaaattttggagattttgaactctaggtgacaaattataacatta 2691719  T
Q  284 gggttccaattttatatatttgaggaagaaagagc 318  Q
    ||||||||| |||||||||||| ||||||||||||    
T  2691718 gggttccaaatttatatatttggggaagaaagagc 2691684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 184 - 317
Target Start/End: Complemental strand, 20820423 - 20820290
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||| ||| ||| |||||||||||| ||||||| ||  ||  ||||| || ||||||||||||| |||||  | | ||| | ||| ||| ||||||||    
T  20820423 attaggtttttaagttttttgaattggagaagaactttgtcatcaattagtggaagaaattttggggattttaaactttaggtgacaaattataaaatta 20820324  T
Q  284 gggttccaattttatatatttgaggaagaaagag 317  Q
    ||||||||| |||||||||||||| |||||||||    
T  20820323 gggttccaaatttatatatttgagaaagaaagag 20820290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 40 - 318
Target Start/End: Original strand, 35997284 - 35997568
Alignment:
Q  40 attaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgctt 139  Q
    ||||||| || ||||| ||||| ||||| ||||||| |||  | |||| ||| ||  |||||||| ||||||||||||||||| || || | ||||||||    
T  35997284 attaaacttgcagcttgaagatgaagctcgactttcttaacagttttttcccatattcccaccccccatcatttcagattcaatttcaatagttttgctt 35997383  T
Q  140 gaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaa------gaacgttaccactaattat 233  Q
     |||||||||||  |||||||  |||| ||||||||         ||||||||| ||| ||||| ||||||||||      ||||   |||||| |||||    
T  35997384 caagaaattttgtggattttggctttcagattcaatacgaaaaatttagggtttcaagttttttaaattggggaagaactggaactggaccacttattat 35997483  T
Q  234 tgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 318  Q
    || | ||||||| ||  || || || |||||||| || |||||  ||||||||||||||||||||| | ||| |||||| |||||    
T  35997484 tggaggaaatttaggttatattagaatgtagattgcagattgtgtaattagggttccaattttatacaattggggaagacagagc 35997568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 291 - 367
Target Start/End: Original strand, 39294645 - 39294721
Alignment:
Q  291 aattttatatatttgaggaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaattttggtca 367  Q
    ||||||||||||||| ||||||||||| |||||||||||| ||||||||| |||||   | ||||||||||||||||    
T  39294645 aattttatatatttggggaagaaagagaaaagcattttctgcaaatcaatcaatttagcctttggaaattttggtca 39294721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 184 - 312
Target Start/End: Original strand, 47942413 - 47942541
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| ||| ||||||||||||||||||||   |||||| ||||||| | ||||||| ||  || || || ||||||||| | |||||  |||||    
T  47942413 attagggttttaagttttttgaattggggaagaactggaccacttattattggaggaaatttaggtgatattagaatgtagattatagattgtgtaatta 47942512  T
Q  284 gggttccaattttatatatttgaggaaga 312  Q
    |||||||||||||||| | ||| ||||||    
T  47942513 gggttccaattttatacaattggggaaga 47942541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 54387537 - 54387670
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||||| | |||||| | | ||| | ||| ||||||| ||||    
T  54387537 attagggttttaagttttttgaattggggaagaactttggcatcaattcatggaagaaattttgaggattttgaactctaggtgacaaattgtaacatta 54387636  T
Q  284 gggttccaattttatatatttgaggaagaaagag 317  Q
    ||||||||| |||||||||||  || ||||||||    
T  54387637 gggttccaaatttatatatttagggcagaaagag 54387670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 122
Target Start/End: Original strand, 10544498 - 10544605
Alignment:
Q  15 aacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttc 114  Q
    ||||||||| || ||| ||||||||||||||||| |||||| ||||| ||| | |||||| | || || |||||||| ||| |||||| | |||||||||    
T  10544498 aacattcaaacattctgacatcaccattaaacatagagcttgaagatgaagttcgactttgagaactgtttttgcccatacgcccaccacccatcatttc 10544597  T
Q  115 agattcaa 122  Q
    | ||||||    
T  10544598 atattcaa 10544605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 299
Target Start/End: Complemental strand, 44793358 - 44793243
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| ||| ||||||||||||||||||||   |||||| ||||||| | |||||||  |  || || || ||||||||| | |||||  |||||    
T  44793358 attagggttttaagttttttgaattggggaagaactggaccacttattattggaggaaatttatgtgatattagaatgtagattatagattgtgtaatta 44793259  T
Q  284 gggttccaattttata 299  Q
    ||||||||||||||||    
T  44793258 gggttccaattttata 44793243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 184 - 318
Target Start/End: Complemental strand, 11254512 - 11254378
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    ||||||||||  || |||||||||||||||||||| ||  ||  ||||| || ||||| ||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  11254512 attagggttttgagttttttgaattggggaagaacattgacatcaattaatggaagaattttgggggattttgaactctaggtgacaaattataacatta 11254413  T
Q  284 gggttccaattttatatatttgaggaagaaagagc 318  Q
    ||||| ||| |||||||||||| ||||||||||||    
T  11254412 gggtttcaaatttatatatttggggaagaaagagc 11254378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 312
Target Start/End: Original strand, 10544693 - 10544778
Alignment:
Q  227 taattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaaga 312  Q
    |||||| || ||||||||||||| |||||||| ||||||  |   |||| ||||||||||||||||||||||| ||||| ||||||    
T  10544693 taattaatggaagaaattttggggattttggactgtagacgagggattgaaaaattagggttccaattttatagatttggggaaga 10544778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 318
Target Start/End: Original strand, 26397635 - 26397715
Alignment:
Q  237 aagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 318  Q
    ||||||||||||| |||||| | | ||||| ||| ||| |||| ||||||||| ||||||||| ||||||||||||||||||    
T  26397635 aagaaattttggggattttgaactctagatgacaaattataaa-ttagggttctaattttatagatttgaggaagaaagagc 26397715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 49524394 - 49524527
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | |  || | ||| ||| ||| ||||    
T  49524394 attagggttttaagttttttgaattggggaagaacattgacatcaattcatgtaagaaatttgggggattttgaactccaggtgacaaattataacatta 49524493  T
Q  284 gggttccaattttatatatttgaggaagaaagag 317  Q
    ||||||||| |||||||| ||| |||||||||||    
T  49524494 gggttccaaatttatatacttggggaagaaagag 49524527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 318
Target Start/End: Complemental strand, 35402202 - 35402069
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| ||| ||||| |||||||||||||| ||  ||  ||||  || ||||||||| ||| |||| | | | ||| | ||| ||| ||| ||||    
T  35402202 attagggttttaagtttttttaattggggaagaacattgacatcaattcatggaagaaatttgggggattt-gaactctaggtgacaaattataacatta 35402104  T
Q  284 gggttccaattttatatatttgaggaagaaagagc 318  Q
    ||||||||| |||||||||||| ||||||||||||    
T  35402103 gggttccaaatttatatatttggggaagaaagagc 35402069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 27385940 - 27385980
Alignment:
Q  8 ggacatcaacattcaagcactctcacatcaccattaaacat 48  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  27385940 ggacaccaacattcaagtactctcacatcaccattaaacat 27385980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 291 - 369
Target Start/End: Complemental strand, 230728 - 230650
Alignment:
Q  291 aattttatatatttgaggaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaattttggtcact 369  Q
    ||||||||||| ||| |||||||| ||||||||||||||  |||||||   || ||  |||||||||||| ||||||||    
T  230728 aattttatataattggggaagaaaaagcaaagcattttcagcaaatcagccaaattagtccttggaaattatggtcact 230650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 169
Target Start/End: Complemental strand, 28101179 - 28101018
Alignment:
Q  8 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 107  Q
    ||||| ||| |||||||||| ||||||||||||||| |||| |||||| ||||| ||| | | |||| |||| |  |||||||  ||   ||||| | ||    
T  28101179 ggacaccaatattcaagcaccctcacatcaccattatacatagagcttgaagatgaagatcgtctttgataactatttttgcctata-tgccaccaccca 28101081  T
Q  108 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtga-ttttgaatttcgga 169  Q
    |||||||||||||||  ||||||     ||||||||||||||||| || ||||| ||||||||    
T  28101080 tcatttcagattcaacctgaacaccaaagcttgaagaaattttggagatttttggatttcgga 28101018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 317
Target Start/End: Original strand, 42982211 - 42982248
Alignment:
Q  280 attagggttccaattttatatatttgaggaagaaagag 317  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  42982211 attagggttccaaatttatatatttggggaagaaagag 42982248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 317
Target Start/End: Complemental strand, 20494182 - 20494146
Alignment:
Q  281 ttagggttccaattttatatatttgaggaagaaagag 317  Q
    |||||||||||| |||||||||||| |||||||||||    
T  20494182 ttagggttccaaatttatatatttggggaagaaagag 20494146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 112; Significance: 2e-56; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 14 - 314
Target Start/End: Complemental strand, 17951152 - 17950853
Alignment:
Q  14 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 113  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  ||||||||  |   ||||| | ||||||||    
T  17951152 caacattcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccaaatgaccacctcccatcattt 17951053  T
Q  114 cagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattgggga 213  Q
     |||||||| || |||| |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| |||||||    
T  17951052 tagattcaatttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaa-attagggtttgtaattttttgatttgggga 17950954  T
Q  214 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaa 313  Q
    ||||||| |||  ||||||||| |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  17950953 agaacgtgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaa 17950854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 14 - 314
Target Start/End: Complemental strand, 35174974 - 35174674
Alignment:
Q  14 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 113  Q
    ||||||||| ||||||||| |||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||    |||| | ||| ||||    
T  35174974 caacattcaggcactctcatatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgatcacctcccattattt 35174875  T
Q  114 cagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattgggga 213  Q
     |||||||| || |||| |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| |||||||    
T  35174874 tagattcaatttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgcaattttttgatttgggga 35174775  T
Q  214 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaa 313  Q
    ||||||| |||  ||||||||| |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  35174774 agaacgtgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaa 35174675  T
Q  314 a 314  Q
    |    
T  35174674 a 35174674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 20 - 316
Target Start/End: Original strand, 17936042 - 17936339
Alignment:
Q  20 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgctttt-gcccttacacccacccctcatcatttcagat 118  Q
    ||||||| ||| |||||||||||||||||  |  || ||||| ||||| |||||| | || || |||| |||| |||  ||||| | ||||||||| |||    
T  17936042 tcaagcattctgacatcaccattaaacataaattttgaagatgaagctcgactttgagaactgttttttgcccatacgtccaccacccatcatttcggat 17936141  T
Q  119 tcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaac 218  Q
    ||||  ||||||||||||||||||    |||||| ||||||| ||||| ||||||||        |||||||||||||| |||| ||| | || || |||    
T  17936142 tcaatctgaacaattttgcttgaattttttttggggattttggatttcagattcaatcaaaacaaattagggtttgaagtttttagaagtaggcaataac 17936241  T
Q  219 gttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaaga 316  Q
    |||  || |||||| || |||||||||||||||||||||| ||||||||| | |||| |||||||||||| |||||||||| ||||||||||||||||    
T  17936242 gttgtcattaattaatggaagaaattttgggaattttggattgtagattagagattgaaaaattagggtttcaattttatagatttgaggaagaaaga 17936339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 14 - 314
Target Start/End: Original strand, 34344824 - 34345123
Alignment:
Q  14 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 113  Q
    |||||||||||||||||||||||||||||||||||||||  | ||| | |||||||||||| |||  |  |||||||| ||   |||||||  |||||||    
T  34344824 caacattcaagcactctcacatcaccattaaacatggaggatgaagttgaagcttgactttgatagctctttttgcccatatgaccacccca-atcattt 34344922  T
Q  114 cagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattgggga 213  Q
     |||||||| || |||| |||||||| ||  |||||||  |||||||  ||||  || ||||        ||||||||||| |  ||||| | | |||||    
T  34344923 tagattcaatttcaacacttttgcttaaatgaattttgcagattttggttttcatatccaattaaaaaaaattagggtttgcaatttttttattcgggga 34345022  T
Q  214 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaa 313  Q
    ||||||| |||  ||||||||| |||||| ||||   |||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||    
T  34345023 agaacgtgacccttaattattggaagaaaatttgaagattttggagtgtagattacacattgtaaagttagggttccaattttatatattttaggaagaa 34345122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 186 - 314
Target Start/End: Complemental strand, 4289838 - 4289710
Alignment:
Q  186 tagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagg 285  Q
    ||||||||| |  ||||||| |||||||||||||| |||  ||||||||| |||||| |||||  |||||||||| ||||||||| ||||||||||||||    
T  4289838 tagggtttgcaattttttgatttggggaagaacgtgacccttaattattggaagaaaatttggagattttggagtatagattacacattgtaaaattagg 4289739  T
Q  286 gttccaattttatatatttgaggaagaaa 314  Q
     ||||||||||||||||||| ||||||||    
T  4289738 attccaattttatatatttggggaagaaa 4289710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 192 - 365
Target Start/End: Original strand, 31210129 - 31210313
Alignment:
Q  192 ttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttcca 291  Q
    |||||| ||||||||||||||||||| ||||||||||||||||| |  | ||||| |  |||||||||||||||||||| |||||||||||||| || ||    
T  31210129 ttgaagttttttgaattggggaagaaagttaccactaattattggataatatttttgagattttggagtgtagattacagattgtaaaattaggttttca 31210228  T
Q  292 atttt--------atata---tttgaggaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaattttggt 365  Q
    || ||        | |||    |||||| ||||||||||||||||||||||||||||||| |||||  |||||| ||||||||||    
T  31210229 atatttggggaagaaataaccgttgagggagaaagagcaaagcattttctacaaatcaatcaatttagtccttgaaaattttggt 31210313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 184 - 318
Target Start/End: Complemental strand, 33277234 - 33277101
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| ||| |||||||||||||||||||| |||  |  ||||  || ||||||||||||| |||||| | | ||| | ||| ||| |||||| |    
T  33277234 attagggttttaagttttttgaattggggaagaactttaatatcaattcatggaagaaattttggggattttgaactctaggtgacaaattataaaatca 33277135  T
Q  284 gggttccaattttatatatttgaggaagaaagagc 318  Q
    ||||||||| ||||||||||||| |||||||||||    
T  33277134 gggttccaaatttatatatttga-gaagaaagagc 33277101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 184 - 317
Target Start/End: Complemental strand, 7371586 - 7371453
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  7371586 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactctaggtgacaaattataacatta 7371487  T
Q  284 gggttccaattttatatatttgaggaagaaagag 317  Q
    ||||||||| |||||||||||| |||||||||||    
T  7371486 gggttccaaatttatatatttggggaagaaagag 7371453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 30640027 - 30639903
Alignment:
Q  192 ttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttcca 291  Q
    |||||| ||||||||||  ||||||||   |||||| ||||||| | ||||||| ||  ||||| ||||||||||| || |||||  ||||| |||||||    
T  30640027 ttgaagttttttgaattatggaagaactggaccacttattattggaggaaatttaggtgattttagagtgtagattgcagattgtgtaattatggttcca 30639928  T
Q  292 attttatatatttgaggaagaaaga 316  Q
    |||||||| | || |||||||||||    
T  30639927 attttatacaattaaggaagaaaga 30639903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 199 - 318
Target Start/End: Original strand, 11356803 - 11356922
Alignment:
Q  199 tttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttat 298  Q
    |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||  |||||| | | ||| | ||| ||| ||| ||||||||||||| |||||    
T  11356803 tttttgaattggggaagaacattgacatcaattcatggaagaaatttgggagattttgaactctaggtaacaaattataacattagggttccaaatttat 11356902  T
Q  299 atatttgaggaagaaagagc 318  Q
    ||||||| ||||||||||||    
T  11356903 atatttggggaagaaagagc 11356922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 314
Target Start/End: Complemental strand, 33267419 - 33267342
Alignment:
Q  237 aagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 314  Q
    ||||||||||||| |||||| | | ||| | ||| ||| ||| ||||||||||||| ||| |||||||| ||||||||    
T  33267419 aagaaattttggggattttgaactctaggtgacaaattataacattagggttccaaatttgtatatttggggaagaaa 33267342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 304
Target Start/End: Complemental strand, 14338061 - 14337985
Alignment:
Q  228 aattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatattt 304  Q
    ||||| || ||||||||||||| |||||| | | ||  | ||| ||| ||||||||||||||||| |||||||||||    
T  14338061 aattaatggaagaaattttggggattttgaactctatgtgacaaattataaaattagggttccaaatttatatattt 14337985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 9e-49; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 184 - 318
Target Start/End: Original strand, 1344478 - 1344612
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||  |||||||||||||||||| | ||||||||||||    
T  1344478 attagggtttgaagttttttgaattggggaagaacgttaccaccaattattggaagaaattttggagattttggagtgtagattaaagattgtaaaatta 1344577  T
Q  284 gggttccaattttatatatttgaggaagaaagagc 318  Q
    |||||||||||||||||||||  ||||||||||||    
T  1344578 gggttccaattttatatatttagggaagaaagagc 1344612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 14 - 314
Target Start/End: Complemental strand, 42619875 - 42619581
Alignment:
Q  14 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 113  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||| ||||||||||||  ||   |||    ||| ||   ||||||| ||||||||    
T  42619875 caacattcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttggta---gctc---cccatatgaccaccccccatcattt 42619782  T
Q  114 cagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattgggga 213  Q
     |||||||| || |||| |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| |||||||    
T  42619781 tagattcaatttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgcaattttttgatttgggga 42619682  T
Q  214 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaa 313  Q
    ||||||| |||  ||||||||| |||||| |||||  |||||||||||||||||| | |||||||||||||||||||||||||||| ||||| |||||||    
T  42619681 agaacgtgacccttaattattggaagaaaatttggagattttggagtgtagattaaacattgtaaaattagggttccaattttatacatttggggaagaa 42619582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 189 - 391
Target Start/End: Original strand, 24497749 - 24497969
Alignment:
Q  189 ggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggtt 288  Q
    ||||||||| |||||||||||||||||||||||| || | ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||    
T  24497749 ggtttgaaggtttttgaattggggaagaacgttatcattgattattggaagaaattttgggaattttggagtgtagattacttattgtaaaattagagtt 24497848  T
Q  289 ccaattttatatattt------------------gaggaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaattttggtcactg 370  Q
     |||||||||||||||                  | ||||||||||||||| |||||| | ||||||||| |||||| |||||| |||||||| |||||     
T  24497849 tcaattttatatatttagggaagaaatagccattggggaagaaagagcaaaacattttatgcaaatcaatcaatttggtccttgtaaattttgatcacta 24497948  T
Q  371 tcgaccacattagtctctgct 391  Q
    ||| ||| |||||||||||||    
T  24497949 tcggccaaattagtctctgct 24497969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 8 - 318
Target Start/End: Complemental strand, 18727164 - 18726853
Alignment:
Q  8 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 107  Q
    ||||| ||||||||||||||||||||| ||||||||||| |||||||| ||||| |||||| ||||||||||  | |||| ||  ||  |||||||| ||    
T  18727164 ggacaccaacattcaagcactctcacaacaccattaaacttggagcttgaagatgaagctttactttcataaccgttttttcctatattcccaccccaca 18727065  T
Q  108 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaat-nnnnnnntattagggtttgaagctttttgaa 206  Q
    ||||||||||||||| || || | | |||||| |||||||||||  |||||||  |||  |||||| |         |||||||||||||| ||||||||    
T  18727064 tcatttcagattcaatttcaatagtcttgcttcaagaaattttgaggattttggctttgagattcactacgaaaaaaattagggtttgaagttttttgaa 18726965  T
Q  207 ttggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttga 306  Q
    |||||| |||||   |||||| ||||||| |  |||||||    ||| | |||||||||||||| |||||  ||||||||||||||||||||| | |||     
T  18726964 ttggggcagaactgaaccacttattattggagaaaattttcatgattatagagtgtagattacagattgtgtaattagggttccaattttatacaattgg 18726865  T
Q  307 ggaagaaagagc 318  Q
    ||||||||||||    
T  18726864 ggaagaaagagc 18726853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 16 - 318
Target Start/End: Complemental strand, 38177225 - 38176923
Alignment:
Q  16 acattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttca 115  Q
    ||||||||||||||||||| ||||||||||| |||||||  ||||| ||||| ||||||||||| |  |||| ||| ||   ||||||| ||||||||||    
T  38177225 acattcaagcactctcacaacaccattaaacttggagctcgaagatgaagctcgactttcataactattttttcccatatttccaccccccatcatttca 38177126  T
Q  116 gattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaag 215  Q
    ||||||| || || | |||||||| |||||||||||  |||||||  ||||  |||||||        |||||||||||||| |||||||||||||||||    
T  38177125 gattcaatttcaatagttttgcttcaagaaattttgaggattttggctttcaaattcaatacgaaaaaattagggtttgaagttttttgaattggggaag 38177026  T
Q  216 aacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaag 315  Q
    |||   |||| | || |||| | || ||||||| |||||| ||||||| |||    |||||  ||||||||||||||| ||||| | ||| |||||||||    
T  38177025 aactggaccatttataattggaggatattttggtaattttagagtgtaaattgttgattgtgtaattagggttccaatgttatacaattggggaagaaag 38176926  T
Q  316 agc 318  Q
    |||    
T  38176925 agc 38176923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 16 - 318
Target Start/End: Complemental strand, 38204449 - 38204147
Alignment:
Q  16 acattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttca 115  Q
    ||||||||||||||||||| ||||||||||| |||||||  ||||| ||||| ||||||||||| |  |||| ||| ||   ||||||| ||||||||||    
T  38204449 acattcaagcactctcacaacaccattaaacttggagctcgaagatgaagctcgactttcataactattttttcccatatttccaccccccatcatttca 38204350  T
Q  116 gattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaag 215  Q
    ||||||| || || | |||||||| |||||||||||  |||||||  ||||  |||||||        |||||||||||||| |||||||||||||||||    
T  38204349 gattcaatttcaatagttttgcttcaagaaattttgaggattttggctttcaaattcaatacgaaaaaattagggtttgaagttttttgaattggggaag 38204250  T
Q  216 aacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaag 315  Q
    |||   |||| | || |||| | || ||||||| |||||| ||||||| |||    |||||  ||||||||||||||| ||||| | ||| |||||||||    
T  38204249 aactggaccatttataattggaggatattttggtaattttagagtgtaaattgttgattgtgtaattagggttccaatgttatacaattggggaagaaag 38204150  T
Q  316 agc 318  Q
    |||    
T  38204149 agc 38204147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 8 - 314
Target Start/End: Complemental strand, 35291644 - 35291343
Alignment:
Q  8 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 107  Q
    ||||| ||||||||||||||| ||||||||||||||||| |||||||| ||||| || |||||||||||||| || |||| ||| ||  |||||||| ||    
T  35291644 ggacaccaacattcaagcactatcacatcaccattaaacttggagcttgaagatgaaacttgactttcataactgttttttcccatattcccacccc-ca 35291546  T
Q  108 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaat 207  Q
    ||||||||||| ||| || || | |||||||| |||||||||||  ||||||||  |||  |||||||         ||||||||||||| ||| |||||    
T  35291545 tcatttcagatccaatttcaatagttttgcttcaagaaattttgaggattttgacattcaaattcaatgcaaaaa-gttagggtttgaagttttgtgaat 35291447  T
Q  208 tggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgag 307  Q
    |||||||||||   |||||| |||| || | ||||||||||  ||||||||||||||||| |   ||||  ||| |||||| |||||||||| | ||| |    
T  35291446 tggggaagaaccggaccacttattactggaggaaattttggtgattttggagtgtagattgc---ttgtgtaatcagggtttcaattttatacaattggg 35291350  T
Q  308 gaagaaa 314  Q
    |||||||    
T  35291349 gaagaaa 35291343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 8 - 299
Target Start/End: Original strand, 40330004 - 40330296
Alignment:
Q  8 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 107  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||  || ||||| ||||| ||||||||||| |  |||| ||| ||   ||||||| ||    
T  40330004 ggacaccaacattcaagcactctcacatcaccattaaacttggaaattgaagatgaagctcgactttcataactattttttcccatatttccacccccca 40330103  T
Q  108 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaat-nnnnnnntattagggtttgaagctttttgaa 206  Q
    |||||||||| |||| || || | |||||||| ||||||||||   |||||||  ||||  |||||||         |||||||||| ||| || |||||    
T  40330104 tcatttcagaatcaatttcaatagttttgcttcaagaaattttcaagattttggctttcatattcaatacggaaaaaattagggtttcaagtttgttgaa 40330203  T
Q  207 ttggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttata 299  Q
    |||||||||| |   |||||| ||||||| | |||||||| |  ||||||||||||||||| ||||||||  |||||||||||||||||||||    
T  40330204 ttggggaagagctggaccacttattattggaggaaatttttgtgattttggagtgtagattgcatattgtgtaattagggttccaattttata 40330296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 8 - 318
Target Start/End: Original strand, 32089411 - 32089725
Alignment:
Q  8 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 107  Q
    ||||| ||||||||||||||||||||| ||||||||||| |||||||| ||||| |||||||||||||||||  | |||| ||| ||  |||||||| ||    
T  32089411 ggacaccaacattcaagcactctcacaacaccattaaacttggagcttgaagatgaagcttgactttcataaccgttttttcccatattcccaccccaca 32089510  T
Q  108 tcattt--cag-attcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaat-nnnnnnntattagggtttgaagcttttt 203  Q
    ||||||   || |||||| || || | |||||||| |||||||||||  |||||||  |||| |||||| |         |||||||||||||| |||||    
T  32089511 tcattttgaagtattcaatttcaatagttttgcttcaagaaattttgaggattttggctttcagattcactacgaaaaaaattagggtttgaagtttttt 32089610  T
Q  204 gaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatt 303  Q
    ||||||||| |||||   ||| || ||||||| |  |||||||    ||| | ||||||||||| || |||||  ||||||||||||||||||||| | |    
T  32089611 gaattggggcagaactgaacctcttattattggagtaaattttcatgattatagagtgtagattgcagattgtgtaattagggttccaattttatacaat 32089710  T
Q  304 tgaggaagaaagagc 318  Q
    || ||||||||||||    
T  32089711 tggggaagaaagagc 32089725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 184 - 316
Target Start/End: Complemental strand, 1343614 - 1343482
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    ||||||||||| || ||||| |||||||||| |||||||||||||| ||||| ||||||||||||  |||||||||||||| ||| | ||| ||||||||    
T  1343614 attagggtttggagttttttaaattggggaaaaacgttaccactaactattggaagaaattttggagattttggagtgtagtttaaagattataaaatta 1343515  T
Q  284 gggttccaattttatatatttgaggaagaaaga 316  Q
    ||||  |||||||||||||||  ||||||||||    
T  1343514 gggtgtcaattttatatatttagggaagaaaga 1343482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 84 - 314
Target Start/End: Original strand, 27350095 - 27350322
Alignment:
Q  84 ttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttga-atttcggattcaatnnnnnnn 182  Q
    |||||||| |||||||||||| |||||||||  |||||| |  |||| ||||| ||||||||||||||| ||||||   |||| |||||||||           
T  27350095 ttttgcccatacacccacccc-catcatttcttattcaattacaacagttttgtttgaagaaattttggggatttttttattttggattcaataaaaaa- 27350192  T
Q  183 tattagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatt 282  Q
     | |||||||||| | | ||| ||||||||| ||||||||| ||||||||||||||||| ||||||||||||||| ||||  |||| | ||| |||||||    
T  27350193 -aatagggtttgaggttatttcaattggggatgaacgttac-actaattattgaaagaatttttgggaattttggcgtgtgaattaaagattataaaatt 27350290  T
Q  283 agggttccaattttatatatttgaggaagaaa 314  Q
    ||||||||||||||||| ||||| | ||||||    
T  27350291 agggttccaattttatacatttgggaaagaaa 27350322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 8 - 161
Target Start/End: Complemental strand, 43317329 - 43317176
Alignment:
Q  8 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 107  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||||| || ||||  || ||  |||||||| ||    
T  43317329 ggacaccaacattcaagcactctcacatcaccattaaacttggagtttgaagatgaagctcgactttcataactgtttttttccatattcccacccccca 43317230  T
Q  108 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttga 161  Q
    ||||||||||| ||| || |  | |||||||| |||||||||||  ||||||||    
T  43317229 tcatttcagatccaatttcactagttttgcttcaagaaattttgaggattttga 43317176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 14 - 299
Target Start/End: Complemental strand, 32836470 - 32836186
Alignment:
Q  14 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 113  Q
    ||||||||||||||||||||| ||||||||||| |||||||  ||||| ||||| ||||||||||| || |||| | | ||  |||||||| ||||||||    
T  32836470 caacattcaagcactctcacaacaccattaaacttggagctcgaagatgaagctcgactttcataactgttttttcacatattcccacccc-catcattt 32836372  T
Q  114 cagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattgggga 213  Q
    ||||||||| || || | |||||||| || |  |||||  |||||||  |||   |||||||        |||||||||||||| |||||||||||||||    
T  32836371 cagattcaatttcaatagttttgcttcaaaattttttgaggattttggcttttaaattcaatacgaaaaaattagggtttgaagttttttgaattgggga 32836272  T
Q  214 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttata 299  Q
    ||||| | |||| | ||  ||| | || |||||||  |||||  |||||| ||| || |||||  ||||||||||||||| |||||    
T  32836271 agaacttgaccatttatatttggaggatattttggtgattttatagtgtaaattgcagattgtgtaattagggttccaatgttata 32836186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 84 - 318
Target Start/End: Original strand, 6116465 - 6116700
Alignment:
Q  84 ttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnt 183  Q
    |||||||  |||||||| | | ||||||||| ||||||| |||||||||||||  |||||||||||||| ||||||| |||||  |||||||            
T  6116465 ttttgcctatacacccatcacccatcatttcggattcaatttgaacaattttgaatgaagaaattttggggattttggatttcatattcaatcaaaacaa 6116564  T
Q  184 a--ttagggtttgaagctttttgaattggggaagaac--gttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaa 279  Q
    |  ||||||||||||| |||| ||||  ||||||||   |||     |||||| || ||||||||||||| ||||| || ||||||||| | |||| |||    
T  6116565 aaattagggtttgaagtttttagaatcagggaagaaatggttgt---taattaatggaagaaattttggggatttttgactgtagattagagattgaaaa 6116661  T
Q  280 attagggttccaattttatatatttgaggaagaaagagc 318  Q
    ||||||||| |||||||||| ||||| ||||||||||||    
T  6116662 attagggtttcaattttatagatttggggaagaaagagc 6116700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 8 - 160
Target Start/End: Original strand, 18341593 - 18341745
Alignment:
Q  8 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 107  Q
    ||||| ||||||||||||| ||| |||||||| |||||||| ||| || | ||| |||||  | ||| | || || |||||||| |||  ||||| | ||    
T  18341593 ggacaccaacattcaagcattcttacatcaccgttaaacatagagtttgaggatgaagctcaagtttgagaactgtttttgcccatacgaccaccaccca 18341692  T
Q  108 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttg 160  Q
    |||||||||||||||  |||||||||||| ||||||||||||||| |||||||    
T  18341693 tcatttcagattcaatctgaacaattttgattgaagaaattttggggattttg 18341745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 184 - 318
Target Start/End: Complemental strand, 18623899 - 18623765
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||||||| |||||| | | ||| | ||  ||| ||| ||||    
T  18623899 attagggttttaagttttttgaattggggaagaactttggcatcaattcatgtaagaaattttggggattttgaactctaggtgacgaattataacatta 18623800  T
Q  284 gggttccaattttatatatttgaggaagaaagagc 318  Q
    ||||||||| |||||||||||| ||||||||||||    
T  18623799 gggttccaaatttatatatttggggaagaaagagc 18623765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 318
Target Start/End: Complemental strand, 32134690 - 32134556
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  32134690 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactataggtgacaaattataacatta 32134591  T
Q  284 gggttccaattttatatatttgaggaagaaagagc 318  Q
    ||||||||| ||||||||||||  |||||||||||    
T  32134590 gggttccaaatttatatatttgtagaagaaagagc 32134556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 299
Target Start/End: Original strand, 35400226 - 35400489
Alignment:
Q  36 caccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaatttt 135  Q
    ||||||||||| ||||| || ||||| || ||||||||||| ||    |||| ||| ||  |||||||| ||||||||||||||||| || || | ||||    
T  35400226 caccattaaacttggagtttgaagatgaaacttgactttcaaaacctttttttcccatattcccaccccccatcatttcagattcaatttcaatagtttt 35400325  T
Q  136 gcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaattattg 235  Q
    |||| |||||||||||  |||||||  |||| || ||| |        | |  ||||||||| ||||| |||||||  ||||    |||||| |||||||    
T  35400326 gcttcaagaaattttgaggattttggctttcagactcactacgaaaaaaattaggtttgaagttttttaaattgggacagaattggaccacttattattg 35400425  T
Q  236 aaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttata 299  Q
     | ||||||||   |||| | ||||||||||| ||||||||  |||||||||||||||||||||    
T  35400426 gaggaaattttcataattatagagtgtagattgcatattgtgtaattagggttccaattttata 35400489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 34328466 - 34328600
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttggga-attttggagtgtagattacatattgtaaaatt 282  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || |||||||||||||  |||||| | | |||   ||| ||| ||| |||    
T  34328466 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaattttgggggattttgaactctaggcgacaaattataatatt 34328565  T
Q  283 agggttccaattttatatatttgaggaagaaagag 317  Q
    |||||||||| |||||||||||| |||||||||||    
T  34328566 agggttccaaatttatatatttggggaagaaagag 34328600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 12738337 - 12738470
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  12738337 attagggttttaagttttttgaattggggaagaacattgacatcaattcatgtaagaaatttgggggattttgaactctaggtaacaaattataacatta 12738436  T
Q  284 gggttccaattttatatatttgaggaagaaagag 317  Q
    ||||||||| ||||||| |||  |||||||||||    
T  12738437 gggttccaaatttatatgtttagggaagaaagag 12738470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 12801160 - 12801293
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  12801160 attagggttttaagttttttgaattggggaagaacattgacatcaattcatgtaagaaatttgggggattttgaactctaggtaacaaattataacatta 12801259  T
Q  284 gggttccaattttatatatttgaggaagaaagag 317  Q
    ||||||||| ||||||| |||  |||||||||||    
T  12801260 gggttccaaatttatatgtttagggaagaaagag 12801293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 27077123 - 27077256
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||| ||||||| |||||||||||||||||||||||  ||  ||||| || |||||||||| |  |||||| | | |   | ||| ||| ||||||||    
T  27077123 attaggttttgaagttttttgaattggggaagaacgttgtcatcaattaatggaagaaattttagagattttgaactctcagtgacaaattataaaatta 27077222  T
Q  284 gggttccaattttatatatttgaggaagaaagag 317  Q
    |||||||||| ||||  ||||| |||||||||||    
T  27077223 gggttccaatgttatggatttggggaagaaagag 27077256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 33257426 - 33257559
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||||||| |||||||||||||| |||||   |||||| ||||||| | ||||||||    ||| | ||||||| ||| || |||||  ||| |    
T  33257426 attagggtttgaagttttttgaattggggcagaactgaaccacttattattggaggaaattttcatgattatagagtgtatattgcagattgtgtaatca 33257525  T
Q  284 gggttccaattttatatatttgaggaagaaagag 317  Q
    ||||| |||||||||| | ||| |||||||||||    
T  33257526 gggttacaattttatacaattggggaagaaagag 33257559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 33257262 - 33257309
Alignment:
Q  8 ggacatcaacattcaagcactctcacatcaccattaaacatggagctt 55  Q
    ||||| ||||||||||||||||||||| ||||||||||| ||||||||    
T  33257262 ggacaccaacattcaagcactctcacaacaccattaaacttggagctt 33257309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 305
Target Start/End: Complemental strand, 41494285 - 41494167
Alignment:
Q  187 agggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattaggg 286  Q
    ||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||||||| |||||| | | ||| | ||| ||| ||| ||| |||    
T  41494285 agggttttaagttttttgaattggggaagaactttgtcatcaattcatggaagaaattttggggattttgaactctaggtgacaaattataacattcggg 41494186  T
Q  287 ttccaattttatatatttg 305  Q
    |||||| ||||||||||||    
T  41494185 ttccaaatttatatatttg 41494167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 237 - 318
Target Start/End: Complemental strand, 30464344 - 30464263
Alignment:
Q  237 aagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 318  Q
    ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||||||||||| |||||||||||| ||||||||||||    
T  30464344 aagaaatttgggggattttgaactctaggtaacaaattataacattagggttccaaatttatatatttggggaagaaagagc 30464263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 317
Target Start/End: Complemental strand, 28035852 - 28035772
Alignment:
Q  237 aagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagag 317  Q
    |||||||||||| ||||||  | |||| |||| | |||| ||| ||| |||| ||||||||||||| ||||||||||||||    
T  28035852 aagaaattttggaaattttaaactgtaaattagagattgaaaagttaaggtttcaattttatatatctgaggaagaaagag 28035772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 27076963 - 27077010
Alignment:
Q  14 caacattcaagcactctcacatcaccattaaacatggagcttaaagat 61  Q
    ||||||||||| |||||||||||||||||||| || |||||| |||||    
T  27076963 caacattcaagtactctcacatcaccattaaaaatagagcttgaagat 27077010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 318
Target Start/End: Original strand, 28821770 - 28821860
Alignment:
Q  228 aattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 318  Q
    ||||| || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||||||| ||| |||||||||||| ||||||||||||    
T  28821770 aattaatggaagaaatttgggggattttgaactctaggtgacaaattataacattagggtttcaaatttatatatttggggaagaaagagc 28821860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 314
Target Start/End: Complemental strand, 29620529 - 29620495
Alignment:
Q  280 attagggttccaattttatatatttgaggaagaaa 314  Q
    ||||||||||||| |||||||||||||||||||||    
T  29620529 attagggttccaaatttatatatttgaggaagaaa 29620495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 280 - 316
Target Start/End: Original strand, 8541036 - 8541072
Alignment:
Q  280 attagggttccaattttatatatttgaggaagaaaga 316  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  8541036 attagggttccaaatttatatatttggggaagaaaga 8541072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 317
Target Start/End: Original strand, 19998149 - 19998229
Alignment:
Q  237 aagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagag 317  Q
    ||||||||||| |||||||  | | ||| | ||| ||| ||||||||||||| | |||||||| ||||| |||||||||||    
T  19998149 aagaaattttgagaattttaaactctaggtgacaaattataaaattagggtttccattttatagatttggggaagaaagag 19998229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 84 - 312
Target Start/End: Original strand, 37856 - 38082
Alignment:
Q  84 ttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttga-atttcggattcaatnnnnnnn 182  Q
    |||||||| ||||||||||| |||||||||||||||||| |  |||| ||||| |||||| |||||||| ||||||   ||||||||||||||           
T  37856 ttttgcccatacacccaccc-tcatcatttcagattcaattacaacagttttgtttgaaggaattttggggattttttgatttcggattcaatcaaaaa- 37953  T
Q  183 tattagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatt 282  Q
     |||||||||||| | | ||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||   |||||||||||    
T  37954 -attagggtttgaggttatttcaattggggaagaacgttaccactaattattggaagaatttttgggaattttggagtgtggattaatgattgtaaaatt 38052  T
Q  283 agggttccaattttatatatttgaggaaga 312  Q
    ||||||||||||||||| ||||| ||||||    
T  38053 agggttccaattttatacatttggggaaga 38082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 74; Significance: 8e-34; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 97 - 318
Target Start/End: Complemental strand, 57890 - 57669
Alignment:
Q  97 cccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaa 196  Q
    |||||||||||| ||||| ||||||| || || | |||||||  ||||||||||   ||||||| ||||| ||||||||        || ||||||||||    
T  57890 cccacccctcatgatttcggattcaatttcaatagttttgctgaaagaaattttttggattttggatttcagattcaataaaaaaaaat-agggtttgaa 57792  T
Q  197 gctttttgaattgg-ggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattt 295  Q
    | |||||||||| | ||||||| ||||||||| ||||||  ||||||||||||  |||||||||||||||||||| || ||| ||| |||||| ||||||    
T  57791 gttttttgaattagaggaagaatgttaccacttattattcgaagaaattttggttattttggagtgtagattacagatagtataatcagggtttcaattt 57692  T
Q  296 tatatatttgaggaagaaagagc 318  Q
    |||||||||| ||||||||||||    
T  57691 tatatatttggggaagaaagagc 57669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1041 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold1041
Description:

Target: scaffold1041; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 251 - 318
Target Start/End: Original strand, 2643 - 2710
Alignment:
Q  251 attttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 318  Q
    ||||||||||||||||||||||| ||| |||||| |||||| ||||||||||||| ||||||||||||    
T  2643 attttggagtgtagattacatatagtataattagagttccagttttatatatttggggaagaaagagc 2710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1041; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 251 - 318
Target Start/End: Complemental strand, 2423 - 2356
Alignment:
Q  251 attttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 318  Q
    |||||||||||||||||||  || ||| ||| ||||||||||||||||||||||| ||||||||||||    
T  2423 attttggagtgtagattactgatagtataatgagggttccaattttatatatttggggaagaaagagc 2356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 318
Target Start/End: Complemental strand, 4574 - 4446
Alignment:
Q  189 ggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggtt 288  Q
    ||||||||| |||| | |||| |||||||||||  ||  ||||| || ||||| ||||||  |||||  | | ||||| ||| ||||||||||||| |||    
T  4574 ggtttgaagtttttagcattgaggaagaacgttgtcatcaattaatggaagaa-ttttggagattttaaactctagatgacaaattgtaaaattagagtt 4476  T
Q  289 ccaattttatatatttgaggaagaaagagc 318  Q
    ||||||||||| ||||||| ||||||||||    
T  4475 ccaattttatagatttgagaaagaaagagc 4446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 9533 - 9666
Alignment:
Q  184 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 283  Q
    |||||||||| ||| |||||||||||||||| ||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  9533 attagggttttaagttttttgaattggggaaaaacattgacatcaattcatggaagaaatttgggggattttgaactctaggtgacaaattataacatta 9632  T
Q  284 gggttccaattttatatatttgaggaagaaagag 317  Q
    ||||| ||| |||||||||||| |||||||||||    
T  9633 gggtttcaaatttatatatttggggaagaaagag 9666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 199 - 318
Target Start/End: Original strand, 1164 - 1283
Alignment:
Q  199 tttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttat 298  Q
    |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||  |||||| | | ||| | ||| ||| ||| ||||||||||||| |||||    
T  1164 tttttgaattggggaagaacattgacatcaattcatggaagaaatttgggagattttgaactctaggtaacaaattataacattagggttccaaatttat 1263  T
Q  299 atatttgaggaagaaagagc 318  Q
    ||||||| ||||||||||||    
T  1264 atatttggggaagaaagagc 1283  T

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