View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7405_high_1 (Length: 645)
Name: NF7405_high_1
Description: NF7405
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7405_high_1 |
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Alignment Details
Target: chr7 (Bit Score: 572; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 572; E-Value: 0
Query Start/End: Original strand, 20 - 611
Target Start/End: Complemental strand, 48287014 - 48286423
Alignment:
| Q |
20 |
agaatagttatggcgttaccatgcattaccatttgaatacagtgaaggaacaaggaggcatgtcaccattttgaatctgtctcaaagtaacatcaccaca |
119 |
Q |
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| T |
48287014 |
agaatagttatggcgttaccatgcattaccatttgaatacagtgaaggaacaaggaggcatgtcaccattttgaatctgtctcaaagtaacatcaccaca |
48286915 |
T |
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| Q |
120 |
aacaacagtaacaccaaccatcatggatttccaaccttgaaccctaacactcgttcttgttttcacctcaacactaggcaccaaagctttactactaaaa |
219 |
Q |
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| T |
48286914 |
aacaacagtaacaccaatcatcatggatttccaaccttgaaccctaacactcgttcttgttttcacctcaacactaggcaccaaagctttactactaaaa |
48286815 |
T |
|
| Q |
220 |
gcacttttcaacttcctcctttgtttctcattcaactcctcatgtctaaccttcgtttccgccttcaccgccgtcttattcttcaccttcacatcaaacg |
319 |
Q |
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| T |
48286814 |
gcacttttcaacttcctcctttgtttctcattcaactcctcatgtctaaccttcgtttcccccttcaccgccgtcttattcttcaccttcacatcaaacg |
48286715 |
T |
|
| Q |
320 |
cagccaccttcgtcgatcctaaattcaaatcaccattatctgcccatatctgaacactactttgttcaaaacgccacaccatttttgcattacggttctt |
419 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48286714 |
cagccaccttcgtcgatcctaaattcaaatcaccattatctgcccatatctgaacactactttgttcaaaacgccacaccatttttgcattacggttctt |
48286615 |
T |
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| Q |
420 |
cacttccaccattgttaccgtgtttgcgtcgagataagcaccgtcggattttgtggttatgttgaaacttggaacacggaaggaaccgaggtggaattct |
519 |
Q |
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||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
48286614 |
cacttccaccattgttatcgtgtttgcgtcgagataagcaccgtcggattttgtggttatgttgaaacttggaacacggaaagaaccgaggtggaattct |
48286515 |
T |
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| Q |
520 |
ggtatggaaggttgatagagaatgtagataactgcggcggcgaggatgaaaaggaagaagagaatgaggaagatgatgcaaaatgtgcaaca |
611 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48286514 |
ggtatggaaggttggtagagaatgtagataactgcggcggcgaggatgaaaaggaagaagagaatgaggaagatgatgcaaaatgtgcaaca |
48286423 |
T |
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