View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7405_high_14 (Length: 290)
Name: NF7405_high_14
Description: NF7405
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7405_high_14 |
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Alignment Details
Target: chr1 (Bit Score: 258; Significance: 1e-144; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 258; E-Value: 1e-144
Query Start/End: Original strand, 1 - 282
Target Start/End: Original strand, 26955390 - 26955671
Alignment:
| Q |
1 |
tctcaccaagttatatattattcaacatcctttcatcaaatcctggactcttgctcacacttgatattccaacgcaatgaaatggtaacaattgataaga |
100 |
Q |
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| T |
26955390 |
tctcaccaagttatatattattcaacatcctttcatcaaatcctagactcttgctcacacttgatattccaacgcaatgaaatgttaacaatttataaga |
26955489 |
T |
|
| Q |
101 |
aattcaattgctaatatttttaacacattcaagatttaattttacatgtttacatgttatcaattattgattttatatgaatacctctataaatgagaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26955490 |
aattcaattgctaatatttttaacacattcaagatttaattttacatgtttacatgttatcaattattgattttatatgaatacctctataaatgagaaa |
26955589 |
T |
|
| Q |
201 |
attaatcaaattgatacgataaaattcaaatccaacaagcactagtaacaaggggcaaaaatcaagtagtactaaccaccaa |
282 |
Q |
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||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
26955590 |
attaatcaacatgatacgataaaattcaaatccaacaagaactagtaacaaggggcaaaaatcaagtagtactaaccaccaa |
26955671 |
T |
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