View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7405_low_11 (Length: 413)
Name: NF7405_low_11
Description: NF7405
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7405_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 366; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 366; E-Value: 0
Query Start/End: Original strand, 8 - 394
Target Start/End: Original strand, 1908584 - 1908970
Alignment:
| Q |
8 |
ttcgtgtttagtttttaatatttacttttgtgttcatgtttttctgaataagttgatatgttccttcatgttaatgcatcatttatatgatgatttaatc |
107 |
Q |
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| T |
1908584 |
ttcgtgtttagtttttaatatttacttttgtgttcatgtttttctgaataagttgatatgttccttcatgttaatgcatcatttatatgatgatttaatc |
1908683 |
T |
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| Q |
108 |
agctatgtttatgttgtgctgaatttgtgttaacttgtaaaattctcatatgtaacatatggcatcttgttcttaagtatgtataactaagtaatatgtt |
207 |
Q |
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| T |
1908684 |
agctatgtttatgttgtgctgaatttgtgttaacttgtaaaattctcatatgtaacatatggcatcttgttcttaagtatgtataactaagtaatatgtt |
1908783 |
T |
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| Q |
208 |
ttaagatattaataagtttgtatattannnnnnnagttgttttagttgtatgttttatattatatgtgaatgaatgcaatacttcacaaagtatccaagg |
307 |
Q |
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| T |
1908784 |
ttaagatattaataagtttgtatattatttttttagttgttttagttgtatgttttatattatatgtgaatgaatgcaatacttcacaaagtatccaagg |
1908883 |
T |
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| Q |
308 |
atttttagtgaaatcagttgaaatgattatgcaaatacacttacagagctgaacaataaggaagattatgatttttcatgaatataa |
394 |
Q |
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| T |
1908884 |
atttttagtgaaatcagttgaaatgattatgcaaatacacttacagagctgaacaataaggaagattatgatttttcatgaatataa |
1908970 |
T |
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