View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7405_low_8 (Length: 457)
Name: NF7405_low_8
Description: NF7405
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7405_low_8 |
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Alignment Details
Target: chr2 (Bit Score: 367; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 367; E-Value: 0
Query Start/End: Original strand, 49 - 435
Target Start/End: Complemental strand, 39850791 - 39850405
Alignment:
| Q |
49 |
gtgacaacgaaacagacaaatcaatttgtgtcactaacaataacaccattttactattttgaccatgacattaactacatgattctaatagccttagact |
148 |
Q |
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| T |
39850791 |
gtgacaacgaaacagacaaatcaatttgtgtcactaacaataacaccattttactattttgaccatgacattaactacatgattctaatagtcttagact |
39850692 |
T |
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| Q |
149 |
tattaggttttgatgattgtcgttcttacgttaaattaagggggtctagttcttagttgatctcaaatatccaccgatcaattgaactaggaaaagtgtg |
248 |
Q |
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| T |
39850691 |
tattaggttttgatgattgtcgttcttacgttaaattaagggggtctagttcttagttgatctcaaatatcgaccgatcaattgaactaggaaaagtgtg |
39850592 |
T |
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| Q |
249 |
aaaagatcacattttaatcatgcatatttaaatgcataataggtagactctttttaaattcatcgatttgcatttcaaatactgttaatcacttttcata |
348 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
39850591 |
aaaagatcacattttaatcatgcatatttaaacgcataataggtagactctttttaaattcatcgatttgcatttcaaatactgttaattacttttcata |
39850492 |
T |
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| Q |
349 |
tctttaatcgattcaggattgtttagaatcaattcaattaagaccttggataacatttttgaaacaagaatacgtcttaaattgatt |
435 |
Q |
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| T |
39850491 |
tctttaatcgattcaggattgtttagaatcaattcaattaaggccttggataacatttttgaaacaagaatacgtcttaaattgatt |
39850405 |
T |
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