View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7406_low_3 (Length: 623)

Name: NF7406_low_3
Description: NF7406
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7406_low_3
NF7406_low_3
[»] chr7 (48 HSPs)
chr7 (19-603)||(40763203-40763775)
chr7 (414-554)||(29034678-29034818)
chr7 (414-555)||(7322931-7323072)
chr7 (414-554)||(5240310-5240450)
chr7 (414-553)||(43567484-43567623)
chr7 (414-555)||(8292735-8292876)
chr7 (414-554)||(24359686-24359826)
chr7 (414-554)||(27053471-27053611)
chr7 (415-554)||(8380432-8380571)
chr7 (414-555)||(1910234-1910374)
chr7 (438-555)||(22521576-22521693)
chr7 (414-554)||(5347950-5348087)
chr7 (414-521)||(48454800-48454907)
chr7 (442-540)||(3681699-3681797)
chr7 (414-554)||(36279113-36279250)
chr7 (473-554)||(29687467-29687548)
chr7 (440-553)||(42222213-42222326)
chr7 (414-554)||(8258621-8258756)
chr7 (438-554)||(41188788-41188904)
chr7 (440-554)||(46478560-46478673)
chr7 (414-541)||(22707053-22707179)
chr7 (414-554)||(30538458-30538595)
chr7 (429-554)||(49069546-49069671)
chr7 (485-553)||(40194818-40194886)
chr7 (439-554)||(40066920-40067033)
chr7 (457-541)||(31626062-31626146)
chr7 (417-553)||(43958064-43958200)
chr7 (477-541)||(46042752-46042816)
chr7 (478-555)||(30388702-30388779)
chr7 (479-555)||(10575802-10575878)
chr7 (454-542)||(32204185-32204273)
chr7 (458-554)||(18529175-18529271)
chr7 (480-554)||(44296945-44297019)
chr7 (474-555)||(6548520-6548601)
chr7 (477-554)||(16082473-16082550)
chr7 (474-555)||(48879660-48879741)
chr7 (478-520)||(4686085-4686127)
chr7 (474-530)||(16931906-16931961)
chr7 (474-530)||(16937289-16937344)
chr7 (477-513)||(35003637-35003673)
chr7 (458-530)||(40774264-40774336)
chr7 (479-530)||(5543061-5543112)
chr7 (474-529)||(41141040-41141095)
chr7 (484-530)||(43189685-43189731)
chr7 (479-520)||(3720157-3720198)
chr7 (457-530)||(29247938-29248010)
chr7 (429-522)||(35239780-35239873)
chr7 (478-530)||(5977757-5977809)
[»] chr8 (41 HSPs)
chr8 (19-194)||(42911328-42911503)
chr8 (414-555)||(21016035-21016176)
chr8 (414-555)||(19389288-19389429)
chr8 (414-554)||(45337995-45338135)
chr8 (414-551)||(6939152-6939289)
chr8 (414-555)||(4989926-4990064)
chr8 (417-546)||(21016233-21016362)
chr8 (446-553)||(26195383-26195490)
chr8 (414-554)||(10694798-10694938)
chr8 (440-548)||(25249345-25249453)
chr8 (192-349)||(42910826-42910974)
chr8 (440-541)||(8018765-8018866)
chr8 (445-554)||(18068953-18069062)
chr8 (414-536)||(26672799-26672920)
chr8 (417-553)||(37433258-37433392)
chr8 (416-555)||(34713899-34714040)
chr8 (414-554)||(44874324-44874456)
chr8 (414-556)||(5129434-5129582)
chr8 (414-554)||(3174447-3174589)
chr8 (446-554)||(6433535-6433643)
chr8 (485-555)||(33741523-33741593)
chr8 (446-554)||(14855394-14855502)
chr8 (447-532)||(26892799-26892884)
chr8 (414-513)||(35930168-35930267)
chr8 (441-555)||(6396278-6396392)
chr8 (480-554)||(20212433-20212507)
chr8 (438-515)||(7532815-7532892)
chr8 (457-554)||(38869995-38870092)
chr8 (478-553)||(37922972-37923046)
chr8 (457-527)||(31596442-31596512)
chr8 (438-551)||(11332796-11332909)
chr8 (474-554)||(39972190-39972270)
chr8 (417-490)||(19976471-19976545)
chr8 (499-541)||(30351595-30351637)
chr8 (479-520)||(11295507-11295548)
chr8 (482-527)||(17320000-17320045)
chr8 (564-601)||(42910722-42910759)
chr8 (473-541)||(4308813-4308881)
chr8 (478-554)||(24304933-24305008)
chr8 (484-520)||(39491855-39491891)
chr8 (508-536)||(41689098-41689126)
[»] chr1 (52 HSPs)
chr1 (414-554)||(34874558-34874698)
chr1 (414-554)||(27209696-27209836)
chr1 (414-555)||(28850885-28851025)
chr1 (414-555)||(41147453-41147594)
chr1 (414-554)||(11385972-11386112)
chr1 (414-554)||(47655346-47655486)
chr1 (417-554)||(49508712-49508848)
chr1 (414-554)||(22346212-22346352)
chr1 (414-554)||(33929957-33930097)
chr1 (414-553)||(42607299-42607438)
chr1 (414-555)||(2125682-2125823)
chr1 (414-537)||(11385785-11385908)
chr1 (417-553)||(932135-932271)
chr1 (414-554)||(24140764-24140903)
chr1 (414-538)||(32213864-32213988)
chr1 (414-553)||(7190450-7190589)
chr1 (414-554)||(4940715-4940855)
chr1 (417-541)||(40845255-40845379)
chr1 (414-554)||(43433766-43433906)
chr1 (414-555)||(50295408-50295550)
chr1 (434-555)||(6170546-6170667)
chr1 (441-554)||(49901917-49902030)
chr1 (441-555)||(28277484-28277598)
chr1 (414-555)||(29966812-29966954)
chr1 (414-541)||(31975491-31975618)
chr1 (414-555)||(45721745-45721882)
chr1 (436-553)||(52396435-52396551)
chr1 (414-518)||(5945447-5945551)
chr1 (440-541)||(4656020-4656121)
chr1 (414-554)||(50154464-50154604)
chr1 (441-553)||(26469584-26469696)
chr1 (478-554)||(47895325-47895401)
chr1 (477-552)||(30222613-30222689)
chr1 (414-553)||(44286864-44287003)
chr1 (440-542)||(40920188-40920292)
chr1 (474-555)||(43168131-43168212)
chr1 (478-530)||(17402963-17403015)
chr1 (479-554)||(44359712-44359787)
chr1 (432-541)||(41492913-41493021)
chr1 (477-554)||(48938627-48938703)
chr1 (474-554)||(14331828-14331908)
chr1 (478-530)||(41898898-41898950)
chr1 (474-553)||(8892806-8892885)
chr1 (415-509)||(8244128-8244219)
chr1 (473-526)||(51046678-51046731)
chr1 (459-515)||(894960-895016)
chr1 (494-530)||(46296240-46296276)
chr1 (473-520)||(44043500-44043547)
chr1 (432-530)||(16691309-16691407)
chr1 (478-520)||(27210750-27210792)
chr1 (192-234)||(28615743-28615785)
chr1 (417-493)||(4551117-4551193)
[»] chr4 (58 HSPs)
chr4 (414-554)||(26040338-26040478)
chr4 (414-554)||(35808374-35808514)
chr4 (414-554)||(41956191-41956331)
chr4 (414-554)||(55669730-55669870)
chr4 (414-541)||(34016629-34016756)
chr4 (414-554)||(50514592-50514731)
chr4 (414-553)||(23765570-23765709)
chr4 (417-554)||(45688734-45688871)
chr4 (414-555)||(31754928-31755069)
chr4 (414-554)||(34316700-34316841)
chr4 (414-555)||(54339103-54339243)
chr4 (414-554)||(20811254-20811394)
chr4 (414-555)||(26831764-26831904)
chr4 (414-555)||(27839284-27839425)
chr4 (414-555)||(2362619-2362762)
chr4 (414-554)||(10100091-10100231)
chr4 (414-555)||(51266914-51267055)
chr4 (458-554)||(19328950-19329046)
chr4 (414-553)||(32131134-32131273)
chr4 (414-554)||(31168125-31168265)
chr4 (416-554)||(30475416-30475554)
chr4 (474-554)||(47188703-47188783)
chr4 (441-554)||(33951691-33951804)
chr4 (458-554)||(52341592-52341688)
chr4 (414-510)||(19876161-19876257)
chr4 (414-502)||(51290473-51290561)
chr4 (421-555)||(53566935-53567072)
chr4 (432-555)||(35675186-35675309)
chr4 (416-554)||(40436072-40436210)
chr4 (493-555)||(9693528-9693590)
chr4 (415-523)||(31487743-31487851)
chr4 (440-520)||(35511184-35511264)
chr4 (464-554)||(45088061-45088148)
chr4 (461-555)||(3769803-3769897)
chr4 (478-553)||(15986258-15986333)
chr4 (444-555)||(20456559-20456670)
chr4 (474-529)||(46823488-46823543)
chr4 (438-540)||(30617954-30618056)
chr4 (414-500)||(46695940-46696026)
chr4 (429-537)||(13498110-13498218)
chr4 (477-541)||(35927315-35927379)
chr4 (474-530)||(36486724-36486780)
chr4 (457-553)||(51018400-51018496)
chr4 (415-509)||(9693361-9693454)
chr4 (478-540)||(48513624-48513686)
chr4 (474-515)||(11996141-11996182)
chr4 (457-541)||(1457556-1457640)
chr4 (414-466)||(19328725-19328777)
chr4 (438-537)||(29462809-29462908)
chr4 (479-554)||(31494704-31494779)
chr4 (474-520)||(20435828-20435874)
chr4 (474-520)||(49483122-49483168)
chr4 (479-512)||(1801635-1801668)
chr4 (477-530)||(32584560-32584613)
chr4 (474-555)||(39158364-39158445)
chr4 (474-527)||(40593620-40593672)
chr4 (479-520)||(52895749-52895790)
chr4 (487-555)||(31010478-31010546)
[»] chr3 (43 HSPs)
chr3 (414-553)||(8715480-8715618)
chr3 (414-553)||(9067367-9067505)
chr3 (416-554)||(46317477-46317615)
chr3 (414-554)||(44570364-44570504)
chr3 (414-554)||(36730131-36730271)
chr3 (414-555)||(37509101-37509242)
chr3 (414-554)||(4759828-4759968)
chr3 (414-554)||(32415560-32415700)
chr3 (415-554)||(35306323-35306462)
chr3 (414-554)||(29915553-29915693)
chr3 (414-554)||(29964706-29964846)
chr3 (414-554)||(44695649-44695789)
chr3 (416-554)||(10854850-10854992)
chr3 (417-554)||(51817294-51817430)
chr3 (445-553)||(12905292-12905399)
chr3 (414-554)||(25102300-25102439)
chr3 (440-554)||(8847456-8847570)
chr3 (457-554)||(52570771-52570870)
chr3 (461-555)||(20227405-20227499)
chr3 (457-554)||(12051029-12051126)
chr3 (485-554)||(31647295-31647364)
chr3 (414-514)||(1803919-1804019)
chr3 (433-554)||(45899540-45899662)
chr3 (414-504)||(48136701-48136790)
chr3 (438-537)||(18789-18888)
chr3 (474-541)||(11316970-11317037)
chr3 (478-541)||(34060808-34060871)
chr3 (478-541)||(41345979-41346042)
chr3 (457-537)||(18949-19029)
chr3 (414-470)||(41346349-41346405)
chr3 (457-540)||(21324521-21324603)
chr3 (480-527)||(49976185-49976232)
chr3 (460-515)||(33641282-33641337)
chr3 (474-541)||(34750295-34750362)
chr3 (473-526)||(41998901-41998954)
chr3 (477-536)||(39974847-39974906)
chr3 (487-541)||(50420688-50420742)
chr3 (459-512)||(9189255-9189308)
chr3 (497-538)||(11675320-11675361)
chr3 (452-521)||(26850510-26850579)
chr3 (474-530)||(12060097-12060153)
chr3 (434-510)||(13647034-13647110)
chr3 (474-530)||(48313876-48313932)
[»] chr2 (45 HSPs)
chr2 (414-541)||(765128-765255)
chr2 (414-553)||(2966532-2966671)
chr2 (414-554)||(39401513-39401652)
chr2 (414-554)||(17095045-17095184)
chr2 (414-555)||(27495113-27495254)
chr2 (417-555)||(39085773-39085911)
chr2 (414-554)||(17056036-17056175)
chr2 (414-554)||(17068483-17068622)
chr2 (415-554)||(862580-862719)
chr2 (414-548)||(1321165-1321299)
chr2 (417-554)||(16361557-16361694)
chr2 (414-551)||(33864349-33864486)
chr2 (438-554)||(6999193-6999309)
chr2 (414-554)||(17074466-17074605)
chr2 (414-555)||(41436468-41436609)
chr2 (421-555)||(35445275-35445410)
chr2 (426-555)||(9201485-9201613)
chr2 (414-537)||(44299659-44299782)
chr2 (421-548)||(17603808-17603935)
chr2 (440-554)||(17118377-17118490)
chr2 (474-554)||(23685690-23685770)
chr2 (414-548)||(13997882-13998016)
chr2 (427-555)||(33726370-33726498)
chr2 (414-541)||(44173123-44173250)
chr2 (485-555)||(15004917-15004987)
chr2 (422-532)||(43140309-43140419)
chr2 (414-553)||(464787-464927)
chr2 (440-554)||(2239573-2239687)
chr2 (496-554)||(11445379-11445437)
chr2 (458-509)||(11445313-11445364)
chr2 (440-530)||(34220650-34220740)
chr2 (474-530)||(747529-747585)
chr2 (451-555)||(10900265-10900369)
chr2 (442-553)||(34334167-34334278)
chr2 (452-558)||(3454714-3454819)
chr2 (478-554)||(11659253-11659329)
chr2 (475-530)||(29260167-29260222)
chr2 (477-520)||(34512671-34512714)
chr2 (452-530)||(2136451-2136529)
chr2 (473-515)||(2958506-2958548)
chr2 (479-521)||(9965098-9965140)
chr2 (478-512)||(37230253-37230287)
chr2 (487-553)||(2805373-2805441)
chr2 (440-521)||(8327004-8327085)
chr2 (474-506)||(31911203-31911235)
[»] chr6 (24 HSPs)
chr6 (415-555)||(10855423-10855562)
chr6 (439-554)||(12191484-12191599)
chr6 (414-555)||(5578264-5578405)
chr6 (414-555)||(26572060-26572196)
chr6 (414-550)||(16437568-16437696)
chr6 (438-547)||(6866913-6867022)
chr6 (457-554)||(7875202-7875299)
chr6 (414-554)||(7274192-7274332)
chr6 (414-522)||(29692319-29692427)
chr6 (457-554)||(7880448-7880545)
chr6 (414-502)||(32786259-32786346)
chr6 (417-536)||(8324085-8324204)
chr6 (429-554)||(31220320-31220445)
chr6 (504-554)||(32786060-32786110)
chr6 (478-555)||(21186059-21186136)
chr6 (414-553)||(12175552-12175685)
chr6 (481-555)||(34780023-34780097)
chr6 (479-530)||(27127550-27127601)
chr6 (474-541)||(28014639-28014706)
chr6 (485-555)||(6507438-6507508)
chr6 (473-526)||(1947424-1947477)
chr6 (478-555)||(14232533-14232610)
chr6 (473-518)||(19646024-19646069)
chr6 (479-544)||(29964302-29964367)
[»] chr5 (46 HSPs)
chr5 (414-554)||(5151480-5151620)
chr5 (417-554)||(35653236-35653373)
chr5 (414-555)||(4421942-4422083)
chr5 (414-554)||(4962495-4962634)
chr5 (414-554)||(34546769-34546909)
chr5 (432-555)||(25017287-25017410)
chr5 (417-555)||(3639056-3639193)
chr5 (414-554)||(16315512-16315650)
chr5 (414-555)||(39567893-39568034)
chr5 (414-554)||(28143101-28143241)
chr5 (414-554)||(35945237-35945377)
chr5 (414-536)||(1479114-1479236)
chr5 (414-540)||(37243852-37243977)
chr5 (414-555)||(43414042-43414183)
chr5 (433-542)||(1759820-1759929)
chr5 (414-553)||(338742-338881)
chr5 (458-554)||(13951258-13951354)
chr5 (414-554)||(8410133-8410273)
chr5 (457-548)||(12068195-12068286)
chr5 (459-554)||(12914166-12914261)
chr5 (439-525)||(27823279-27823365)
chr5 (414-550)||(10017600-10017733)
chr5 (417-506)||(15915871-15915960)
chr5 (433-541)||(25568288-25568397)
chr5 (415-547)||(40099333-40099461)
chr5 (478-541)||(39335477-39335540)
chr5 (478-554)||(10406779-10406854)
chr5 (474-530)||(39069314-39069370)
chr5 (465-555)||(39693000-39693090)
chr5 (454-542)||(6823770-6823859)
chr5 (499-541)||(16899635-16899677)
chr5 (452-554)||(39042051-39042153)
chr5 (457-530)||(3015071-3015144)
chr5 (474-530)||(678465-678521)
chr5 (478-530)||(10163668-10163720)
chr5 (479-515)||(24288517-24288553)
chr5 (479-515)||(24373668-24373704)
chr5 (434-525)||(27535114-27535206)
chr5 (474-554)||(39167587-39167666)
chr5 (478-513)||(5058777-5058812)
chr5 (477-520)||(12349585-12349628)
chr5 (474-541)||(28599692-28599759)
chr5 (504-554)||(4838272-4838322)
chr5 (457-530)||(38610313-38610386)
chr5 (457-541)||(19894822-19894906)
chr5 (458-530)||(20184570-20184642)
[»] scaffold0062 (3 HSPs)
scaffold0062 (414-554)||(16750-16889)
scaffold0062 (414-554)||(26918-27057)
scaffold0062 (414-554)||(37084-37223)
[»] scaffold0002 (1 HSPs)
scaffold0002 (422-553)||(392114-392249)
[»] scaffold0809 (2 HSPs)
scaffold0809 (495-555)||(4705-4765)
scaffold0809 (415-503)||(4249-4337)
[»] scaffold0050 (1 HSPs)
scaffold0050 (485-540)||(37428-37483)
[»] scaffold0144 (1 HSPs)
scaffold0144 (474-554)||(39580-39658)
[»] scaffold0169 (1 HSPs)
scaffold0169 (473-520)||(9045-9092)


Alignment Details
Target: chr7 (Bit Score: 508; Significance: 0; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 508; E-Value: 0
Query Start/End: Original strand, 19 - 603
Target Start/End: Complemental strand, 40763775 - 40763203
Alignment:
Q  19 acaatcacttgtcgtgacaattggcgtgcgcacataaagaaacccatgcttgttgaaaaatgtatgtgtagcataagcaagagcattcccaatccgagca 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40763775 acaatcacttgtcgtgacaattggcgtgcgcacataaagaaacccatgcttgttgaaaaatgtatgtgtagcataagcaagagcattcccaatccgagca 40763676  T
Q  119 acagcagatatctgcattcacaccacccaataataacatgcataaaatgtactagcttcagaagcataaatcaattagtctatttggattgatcaattta 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40763675 acagcagatatctgcattcacaccacccaataataacatgcataaaatgtactagcttcagaagcataaatcaattagtctatttggattgatcaattta 40763576  T
Q  219 gtttttgaatttgtctctaagggacacgtgagacagggaagtatgaattttagagatcatttctaaattttgttaattttaaggatgtaattgtttgact 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40763575 gtttttgaatttgtctctaagggacacgtgagacagggaagtatgaactttagagatcatttctaaattttgttaattttaaggatgtaattgtttgact 40763476  T
Q  319 ctacattttcaaaaacgaaattgatgtttcaattgtccctgaaaacatcaataatgttaagaataaaaatgttgatggatggtttataaagtatcgagaa 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40763475 ctacattttcaaaaacgaaattgatgtttcaattgtccctgaaaacatcaaaaatgttaagaataaaaatgttgatggatggtttataaagtatcgagaa 40763376  T
Q  419 tgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaa 518  Q
    |||||||||||| ||||| ||||||||||||| |||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||    
T  40763375 tgctaaccattgcccttggggcattggataaggggataaaaatagaaatataacattgaaaaatggtgaaaagtgataaatttaactttttaaaagttaa 40763276  T
Q  519 aatgttgttgaaaccaatgcaaatatgctacttttgaaaccataaagtatttggtaatttccaataaagatgtatcttaattctg 603  Q
    |||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||||||    
T  40763275 aatgttgttgaaaccaatgcaaatatgctactttt------------tatttggtaatttccaataaagatgtatcttaattctg 40763203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 414 - 554
Target Start/End: Complemental strand, 29034818 - 29034678
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||   ||||||||||||||||||||||||||||||||||||||||    
T  29034818 gagaatgctaaccattgtccttgaggcattggataaggggataaaaatataaatatagtattggaaaatggtgaaaagtgataaatttaactttttaaaa 29034719  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    ||||||||||||||||||| |||||||| ||||||||||||    
T  29034718 gtcaaaatgttgttgaaactaatgcaaacatgctacttttg 29034678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 414 - 555
Target Start/End: Original strand, 7322931 - 7323072
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||| |||||||  |||||||||| |||| |||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  7322931 gagaatgctaaccattgcccttgagatattggataagaggataaaaatagaaatataaccttgaaaaatggtgaaaagtgataaatttaattttttaaaa 7323030  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  7323031 gtcaaaatgttgttgaaaccaatgcaaacatgctacttttga 7323072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 414 - 554
Target Start/End: Original strand, 5240310 - 5240450
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||   ||| ||||||||||||||||||||||||||||||||||||    
T  5240310 gagaatgctaaccattgtccttgaggcattggataaagggataaaaatagaaatatagtattgaaaaatggtgaaaagtgataaatttaactttttaaaa 5240409  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    ||||||||||| |||||||||||||||| ||||||||||||    
T  5240410 gtcaaaatgttattgaaaccaatgcaaacatgctacttttg 5240450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 414 - 553
Target Start/End: Original strand, 43567484 - 43567623
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    |||| |||||||||||| ||||| |||||||||||||  ||| ||||||||| ||||   ||||||||||||||||||||||||||||||||||||||||    
T  43567484 gagattgctaaccattgcccttggggcattggataaggagataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaa 43567583  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctactttt 553  Q
    |||||||||||||||||||||||||||| ||| |||||||    
T  43567584 gtcaaaatgttgttgaaaccaatgcaaacatgatactttt 43567623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 414 - 555
Target Start/End: Complemental strand, 8292876 - 8292735
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||| ||||||| |||  |||||||||||| |||| |||||||||||||| | ||||||||||||||||||| ||||||||  ||||||||||    
T  8292876 gagaatgctaatcattgtctttggagcattggataaggggataaaaatagaaatatagcattggaaaatggtgaaaagttataaatttgcctttttaaaa 8292777  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
    |||||||||||||||||| |||| |||| |||||||||||||    
T  8292776 gtcaaaatgttgttgaaatcaatccaaacatgctacttttga 8292735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 414 - 554
Target Start/End: Original strand, 24359686 - 24359826
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||| ||||||||| ||||  || |||||||||| |||| |||||||||||||| |  ||||||||||| ||||| |||||||||||||||||||||    
T  24359686 gagaatgttaaccattgcccttcgggtattggataaggggataaaaatagaaatatagcaatggaaaatggtaaaaagggataaatttaactttttaaaa 24359785  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    || ||||||||||||||||||||||||| ||||||||||||    
T  24359786 gttaaaatgttgttgaaaccaatgcaaacatgctacttttg 24359826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 414 - 554
Target Start/End: Original strand, 27053471 - 27053611
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    |||||| |||| ||||||||||  ||||||||||||  |||| |||||||||||||| | |  |||||||||||||||||||||||||||||||||||||    
T  27053471 gagaatactaatcattgtccttagggcattggataaagggataaaaatagaaatatagcatcagaaaatggtgaaaagtgataaatttaactttttaaaa 27053570  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||||||| ||||||||||||||||||| || |||||||||    
T  27053571 gtcaaaatattgttgaaaccaatgcaaacattctacttttg 27053611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 415 - 554
Target Start/End: Complemental strand, 8380571 - 8380432
Alignment:
Q  415 agaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaag 514  Q
    |||||| ||||||| | ||||| || |||||||||| |||| |||||| ||||||| | |||||||||| ||||||||||||||||||||||||||||||    
T  8380571 agaatgttaaccatggcccttggggtattggataaggggataaaaataaaaatatagcattggaaaatgatgaaaagtgataaatttaactttttaaaag 8380472  T
Q  515 tcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    ||||||||||||||||||||||| ||| || |||||||||    
T  8380471 tcaaaatgttgttgaaaccaatgaaaacatactacttttg 8380432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 414 - 555
Target Start/End: Complemental strand, 1910374 - 1910234
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||| ||||| ||||  |||||| |||||| |||| |||||||||||||||| || |||||||||||||| ||||||||||||||||||||||    
T  1910374 gagaatgctaatcattgcccttagggcatttgataag-ggataaaaatagaaatataacattagaaaatggtgaaaaatgataaatttaactttttaaaa 1910276  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
    || |||||||||||||||| |||| ||| |||||||||||||    
T  1910275 gttaaaatgttgttgaaacaaatgtaaacatgctacttttga 1910234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 438 - 555
Target Start/End: Complemental strand, 22521693 - 22521576
Alignment:
Q  438 ggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatg 537  Q
    ||||||||||||| |||| ||| |||||||||| | |||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  22521693 ggcattggataagaggataaaactagaaatatagcattggaaaatgatgagaagtgataaatttaacttcttaaaagtcaaaatgttgttgaaaccaatg 22521594  T
Q  538 caaatatgctacttttga 555  Q
    |||| |||||||||||||    
T  22521593 caaacatgctacttttga 22521576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 414 - 554
Target Start/End: Original strand, 5347950 - 5348087
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||  ||||  ||||||| ||||| | ||  ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  5347950 gagaatgctaaccattacccttagggcattgaataagggaatataaatagaaatataacattggaaaatgatgaaaagtgataaatttaactttttaaaa 5348049  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||||||   |||||||||||||||||| ||||||||||||    
T  5348050 gtcaaaa---tgttgaaaccaatgcaaacatgctacttttg 5348087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 414 - 521
Target Start/End: Original strand, 48454800 - 48454907
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||| ||||||||  ||||| ||||||||||||| |||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  48454800 gagaatgttaaccattacccttggggcattggataaggggataaaaatagaaatataacattgggaaatggtgaaaagtgataaatttaactttttaaaa 48454899  T
Q  514 gtcaaaat 521  Q
    ||||||||    
T  48454900 gtcaaaat 48454907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 442 - 540
Target Start/End: Complemental strand, 3681797 - 3681699
Alignment:
Q  442 ttggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaa 540  Q
    ||||||||| |||| |||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3681797 ttggataaggggataaaaataaaaatacaacattggaaaatggtgaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaaccaatgcaa 3681699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 414 - 554
Target Start/End: Complemental strand, 36279250 - 36279113
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||   |||| ||||||||||||  |||| |||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  36279250 gagaatgctaaccattactcttggggcattggataataggataaaaatataaatatagcattggaaaatggtgaaaagtgataaatttaactttttaaaa 36279151  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
     |||||||   |||||||  |||||||| ||||||||||||    
T  36279150 atcaaaat---gttgaaattaatgcaaacatgctacttttg 36279113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 473 - 554
Target Start/End: Complemental strand, 29687548 - 29687467
Alignment:
Q  473 gttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  29687548 gttggaaaatggtgaaaagtgatgaatttaactttttaaaagttaaaatgttgttgaaaccaatgcaaacatgctacttttg 29687467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 440 - 553
Target Start/End: Complemental strand, 42222326 - 42222213
Alignment:
Q  440 cattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgca 539  Q
    |||| |||||| |||| |||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||    
T  42222326 cattagataaggggataaaaatagaaatatggtattggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaaaccaataca 42222227  T
Q  540 aatatgctactttt 553  Q
    || ||| |||||||    
T  42222226 aacatgttactttt 42222213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 414 - 554
Target Start/End: Original strand, 8258621 - 8258756
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||| |||| |||| ||||| ||||| ||||||| |||| |||||||||||||     || |||||||||||||||||||||||||||||||||| |    
T  8258621 gagaatgttaactattgcccttggggcatcggataaggggataaaaatagaaatat-----tgaaaaatggtgaaaagtgataaatttaactttttaata 8258715  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||| ||| ||||||||||||||||||| || |||||||||    
T  8258716 gtcataattttgttgaaaccaatgcaaacatactacttttg 8258756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 438 - 554
Target Start/End: Original strand, 41188788 - 41188904
Alignment:
Q  438 ggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatg 537  Q
    |||||| |||||| |||| |||||| ||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||    
T  41188788 ggcatttgataagaggataaaaatataaatatagcattggaaaatggtgaaaggtgataaatttaactttttaaaagtcaaaatgctgttgaaatcaatg 41188887  T
Q  538 caaatatgctacttttg 554  Q
    |||| || |||| ||||    
T  41188888 caaacatactacatttg 41188904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 440 - 554
Target Start/End: Original strand, 46478560 - 46478673
Alignment:
Q  440 cattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgca 539  Q
    ||||||||||| |||| |||||||||||||| | ||| ||||| ||||||| |||||||||||||||||||||||| ||||| |||||||||| ||||||    
T  46478560 cattggataaggggataaaaatagaaatatatcattgaaaaatagtgaaaa-tgataaatttaactttttaaaagttaaaatattgttgaaactaatgca 46478658  T
Q  540 aatatgctacttttg 554  Q
    |||||| ||||||||    
T  46478659 aatatgttacttttg 46478673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 414 - 541
Target Start/End: Complemental strand, 22707179 - 22707053
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||| | ||| ||||||| ||||  |||| |||||||||||||| | |||||||||  |||||| |||||||||| |||||||||||    
T  22707179 gagaatgctaaccattgcctttggggcattgaataaa-ggataaaaatagaaatatagcattggaaaataatgaaaaatgataaattttactttttaaaa 22707081  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaa 541  Q
    || || ||||||||||||||||||||||    
T  22707080 gttaacatgttgttgaaaccaatgcaaa 22707053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 414 - 554
Target Start/End: Original strand, 30538458 - 30538595
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||| ||||||||||| | |||| |||||| |||| ||||||||||||||   || |||||| ||||||| ||||||||||||||||||||||    
T  30538458 gagaatgctaatcattgtccttgggacattagataaggggataaaaatagaaatatagtattagaaaatagtgaaaaatgataaatttaactttttaaaa 30538557  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
     ||||||   |||||||| ||||||||| ||| ||||||||    
T  30538558 atcaaaa---tgttgaaatcaatgcaaacatgttacttttg 30538595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 429 - 554
Target Start/End: Complemental strand, 49069671 - 49069546
Alignment:
Q  429 tgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttg 528  Q
    |||| ||| |||||||||||||  ||| ||||||||||||||   ||| |||||||||||||||||||||| ||||||||||||| |||| || ||||||    
T  49069671 tgtctttggggcattggataagaagataaaaatagaaatatagtattgaaaaatggtgaaaagtgataaatctaactttttaaaaatcaatatattgttg 49069572  T
Q  529 aaaccaatgcaaatatgctacttttg 554  Q
    |||||||| |||| ||| ||||||||    
T  49069571 aaaccaatacaaacatgttacttttg 49069546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 485 - 553
Target Start/End: Complemental strand, 40194886 - 40194818
Alignment:
Q  485 tgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctactttt 553  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  40194886 tgaaaagtgataaatttaattttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctactttt 40194818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 439 - 554
Target Start/End: Original strand, 40066920 - 40067033
Alignment:
Q  439 gcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgc 538  Q
    |||||||||||| |||| |||||||||||||||  ||| ||||||||||||| |||||||||||||||||||||| | ||||||||||| |||||||| |    
T  40066920 gcattggataaggggataaaaatagaaatataatattgaaaaatggtgaaaaatgataaatttaactttttaaaaat-aaaatgttgttaaaaccaatac 40067018  T
Q  539 aaatatgctacttttg 554  Q
    ||| || |||||||||    
T  40067019 aaa-atactacttttg 40067033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 457 - 541
Target Start/End: Original strand, 31626062 - 31626146
Alignment:
Q  457 aaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaa 541  Q
    |||||| ||||||||  ||  |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  31626062 aaaataaaaatataatattaaaaaatgatgaaaagtgataaatttaactttttaaaaatcaaaatgttgttgaaaccaatgcaaa 31626146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 417 - 553
Target Start/End: Original strand, 43958064 - 43958200
Alignment:
Q  417 aatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtc 516  Q
    |||||||||||||| ||||    |||||||||||  ||| ||||||||||||||   || |||||| ||||||| |||||||||||| ||||||||||||    
T  43958064 aatgctaaccattgcccttagaccattggataaggcgataaaaatagaaatatagtattagaaaattgtgaaaaatgataaatttaattttttaaaagtc 43958163  T
Q  517 aaaatgttgttgaaaccaatgcaaatatgctactttt 553  Q
    ||||| ||  ||||||||||||||| ||| |||||||    
T  43958164 aaaatattactgaaaccaatgcaaacatgttactttt 43958200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 477 - 541
Target Start/End: Complemental strand, 46042816 - 46042752
Alignment:
Q  477 gaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaa 541  Q
    |||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||    
T  46042816 gaaaatggtgaaaagttataaatttaacttttttaaagtctaaatgttgttgaaaccaatgcaaa 46042752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 478 - 555
Target Start/End: Original strand, 30388702 - 30388779
Alignment:
Q  478 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
    ||||||||||||| |||||||||||||||||||||||||||||| || |||||| ||||  ||| || ||||||||||    
T  30388702 aaaatggtgaaaaatgataaatttaactttttaaaagtcaaaatattattgaaatcaatataaacatactacttttga 30388779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 479 - 555
Target Start/End: Original strand, 10575802 - 10575878
Alignment:
Q  479 aaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
    |||||||||||||||| |||||||||||||||||| || |||| ||||||||  ||||| |||||| ||||||||||    
T  10575802 aaatggtgaaaagtgaaaaatttaactttttaaaactccaaatattgttgaattcaatgaaaatatactacttttga 10575878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 454 - 542
Target Start/End: Complemental strand, 32204273 - 32204185
Alignment:
Q  454 atgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaat 542  Q
    ||||||||||||||||  | ||| |||||| ||||||||||| ||||||||||||||||||| ||||| || |||||  ||||||||||    
T  32204273 atgaaaatagaaatattgcattgaaaaatgatgaaaagtgatgaatttaactttttaaaagttaaaatatttttgaatacaatgcaaat 32204185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 458 - 554
Target Start/End: Original strand, 18529175 - 18529271
Alignment:
Q  458 aaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||||||||||| | |||   ||||||||||||||||| ||||||| |||||  ||||||||||||||||||| | | |||||| |||||| |||||    
T  18529175 aaatagaaatattatgttatgaaatggtgaaaagtgatgaatttaatttttttcaagtcaaaatgttgttgaatctattgcaaacatgctaattttg 18529271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 480 - 554
Target Start/End: Original strand, 44296945 - 44297019
Alignment:
Q  480 aatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||||||||||||||| ||||||| ||||||||||| ||||| | |||||| |||||| |||  |||||||||||    
T  44296945 aatggtgaaaagtgatgaatttaagtttttaaaagttaaaatatcgttgaatccaatgtaaacctgctacttttg 44297019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 474 - 555
Target Start/End: Complemental strand, 6548601 - 6548520
Alignment:
Q  474 ttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
    |||| ||| |||||||| |||| ||||||||||||||||||| ||||| |||||| | ||||||||||  | ||||||||||    
T  6548601 ttgggaaacggtgaaaaatgatgaatttaactttttaaaagttaaaatattgttggatccaatgcaaacttactacttttga 6548520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 477 - 554
Target Start/End: Original strand, 16082473 - 16082550
Alignment:
Q  477 gaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||||||||||||| |||| |||||||| |||||||||| ||  | |||||||| |||||||||| || |||||||||    
T  16082473 gaaaatggtgaaaattgatgaatttaacgttttaaaagttaagttattgttgaatccaatgcaaacatactacttttg 16082550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 474 - 555
Target Start/End: Complemental strand, 48879741 - 48879660
Alignment:
Q  474 ttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
    |||| |||| |||||||||||  ||||||| ||||||||||| ||||| ||||||||   |||| |||||||||||||||||    
T  48879741 ttgggaaatagtgaaaagtgaagaatttaattttttaaaagttaaaatattgttgaatttaatgtaaatatgctacttttga 48879660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 478 - 520
Target Start/End: Original strand, 4686085 - 4686127
Alignment:
Q  478 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaa 520  Q
    |||||||||||||||||| ||||||||||||||||||| ||||    
T  4686085 aaaatggtgaaaagtgattaatttaactttttaaaagttaaaa 4686127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 474 - 530
Target Start/End: Complemental strand, 16931961 - 16931906
Alignment:
Q  474 ttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 530  Q
    ||||||||| || ||||||||  ||||||||||||||||||||||||| ||||||||    
T  16931961 ttggaaaatagt-aaaagtgaataatttaactttttaaaagtcaaaatattgttgaa 16931906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 474 - 530
Target Start/End: Complemental strand, 16937344 - 16937289
Alignment:
Q  474 ttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 530  Q
    ||||||||| || ||||||||  ||||||||||||||||||||||||| ||||||||    
T  16937344 ttggaaaatagt-aaaagtgaataatttaactttttaaaagtcaaaatattgttgaa 16937289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 477 - 513
Target Start/End: Complemental strand, 35003673 - 35003637
Alignment:
Q  477 gaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||||| |||||||||||||||||    
T  35003673 gaaaatggtgaaaagtgattaatttaactttttaaaa 35003637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 40774264 - 40774336
Alignment:
Q  458 aaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 530  Q
    ||||||||||||  | ||| |||||| |||||| |||| ||||||||||||||||||| ||||| ||| ||||    
T  40774264 aaatagaaatattgcattgaaaaatgatgaaaattgatgaatttaactttttaaaagttaaaatattgatgaa 40774336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 479 - 530
Target Start/End: Complemental strand, 5543112 - 5543061
Alignment:
Q  479 aaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 530  Q
    |||||||||||||||||| |||| ||||||||||||| ||||  ||||||||    
T  5543112 aaatggtgaaaagtgatatatttgactttttaaaagttaaaaaattgttgaa 5543061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 474 - 529
Target Start/End: Complemental strand, 41141095 - 41141040
Alignment:
Q  474 ttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttga 529  Q
    |||||||||||||||||||  | ||||||||||||||||| ||||||  |||||||    
T  41141095 ttggaaaatggtgaaaagttgttaatttaactttttaaaaatcaaaaaattgttga 41141040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 484 - 530
Target Start/End: Original strand, 43189685 - 43189731
Alignment:
Q  484 gtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 530  Q
    |||||||||||| ||||| ||||||||||||| ||||| ||||||||    
T  43189685 gtgaaaagtgatgaatttgactttttaaaagttaaaatattgttgaa 43189731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 479 - 520
Target Start/End: Original strand, 3720157 - 3720198
Alignment:
Q  479 aaatggtgaaaagtgataaatttaactttttaaaagtcaaaa 520  Q
    |||||||| ||| |||||||||||||||||||||||| ||||    
T  3720157 aaatggtgtaaaatgataaatttaactttttaaaagttaaaa 3720198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 457 - 530
Target Start/End: Complemental strand, 29248010 - 29247938
Alignment:
Q  457 aaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 530  Q
    |||||||||| || || |||||||| | ||||||||||  |||| |||||||||||||||||||  ||||||||    
T  29248010 aaaatagaaacattacattggaaaacgatgaaaagtgaagaatt-aactttttaaaagtcaaaacattgttgaa 29247938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 522
Target Start/End: Original strand, 35239780 - 35239873
Alignment:
Q  429 tgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatg 522  Q
    |||| ||| |||||| |||||| |||| ||| || ||||||   |||| |||||| | ||| ||||| ||||||||||||||||||| ||||||    
T  35239780 tgtctttggggcatttgataagaggataaaagtaaaaatatggtgttgaaaaatgataaaacgtgatgaatttaactttttaaaagttaaaatg 35239873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 478 - 530
Target Start/End: Original strand, 5977757 - 5977809
Alignment:
Q  478 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 530  Q
    ||||| ||||||||||||  |||||||||||||||||| ||||  ||||||||    
T  5977757 aaaatagtgaaaagtgatggatttaactttttaaaagttaaaaaattgttgaa 5977809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 144; Significance: 2e-75; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 19 - 194
Target Start/End: Complemental strand, 42911503 - 42911328
Alignment:
Q  19 acaatcacttgtcgtgacaattggcgtgcgcacataaagaaacccatgcttgttgaaaaatgtatgtgtagcataagcaagagcattcccaatccgagca 118  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  42911503 acaatcactagtcgtgacaattggcgtgtgcacataaagaaacccatgcttgttgaaaaatgtatgtgtagcataagcaagagcattccgaatccgagca 42911404  T
Q  119 acagcagatatctgcattcacaccacccaataataacatgcataaaatgtactagcttcagaagcataaatcaatt 194  Q
    |||||||||||||||||||| | ||||||||| |||||||||||||||  ||||||||||||||||||||||||||    
T  42911403 acagcagatatctgcattcatatcacccaatagtaacatgcataaaattcactagcttcagaagcataaatcaatt 42911328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 414 - 555
Target Start/End: Original strand, 21016035 - 21016176
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||| | ||||||| ||||||||| |||| |||||||||||||||| ||| |||||||| |||||||||| ||||||||||||||||    
T  21016035 gagaatgctaaccattgcctttgaggctttggataaggggataaaaatagaaatataacattgaaaaatggttaaaagtgatagatttaactttttaaaa 21016134  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
    ||||||||||||||||| |||||||||| |||||||||||||    
T  21016135 gtcaaaatgttgttgaagccaatgcaaacatgctacttttga 21016176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 414 - 555
Target Start/End: Original strand, 19389288 - 19389429
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||| ||||| ||||||||||||| |||| ||||||||||||||   ||||||||| ||||||||||||||||||||||||||||||    
T  19389288 gagaatgctaaccattgcccttggggcattggataaggggataaaaatagaaatatagtattggaaaattgtgaaaagtgataaatttaactttttaaaa 19389387  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
    |||||||| | ||||||| ||||||||| |||||||||||||    
T  19389388 gtcaaaatatcgttgaaaacaatgcaaacatgctacttttga 19389429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 414 - 554
Target Start/End: Complemental strand, 45338135 - 45337995
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||||||||  ||||||||||||| |||| |||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||    
T  45338135 gagaatgctaaccattgtcctttgggcattggataaggggataaaaatagaaatataacattgaaaaatggtgaaaaatgataaatttaactttttaaaa 45338036  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
     |||||||||| |||| ||||||||||| || |||||||||    
T  45338035 atcaaaatgttattgagaccaatgcaaacatactacttttg 45337995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 414 - 551
Target Start/End: Complemental strand, 6939289 - 6939152
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    |||||||||||||||||||| || ||||||| ||||   ||| |||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||    
T  6939289 gagaatgctaaccattgtccatggggcattgaataatgagataaaaatagaaatataacattgaaaaatggtgacaagtgataaatttaactttttaaaa 6939190  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctactt 551  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  6939189 gtcaaaatgttgttgaaaccaatgcaaacatgttactt 6939152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 414 - 555
Target Start/End: Complemental strand, 4990064 - 4989926
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||| |||||||||||  |||||||||||| |||| |||||||||||||| | ||||||||| ||||||| |||||||||||||||||||||     
T  4990064 gagaatgctaatcattgtccttgtagcattggataaggggataaaaatagaaatatagcattggaaaatagtgaaaaatgataaatttaactttttaaat 4989965  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
    ||||||||   ||||||||||||||||| |||||||||||||    
T  4989964 gtcaaaat---gttgaaaccaatgcaaacatgctacttttga 4989926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 417 - 546
Target Start/End: Complemental strand, 21016362 - 21016233
Alignment:
Q  417 aatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtc 516  Q
    |||||||||||||| | ||| ||| ||||||||| |||| |||||||||||||||  ||| ||||||||||||||||||| |||||||||||||||||||    
T  21016362 aatgctaaccattgcctttggggctttggataaggggataaaaatagaaatataatattgaaaaatggtgaaaagtgatagatttaactttttaaaagtc 21016263  T
Q  517 aaaatgttgttgaaaccaatgcaaatatgc 546  Q
    |||||||||||||| |||||||||| ||||    
T  21016262 aaaatgttgttgaagccaatgcaaacatgc 21016233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 446 - 553
Target Start/End: Original strand, 26195383 - 26195490
Alignment:
Q  446 ataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatg 545  Q
    ||||| |||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||    
T  26195383 ataaggggataaaaatagaaatataacattggaaaattgtgaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaaccaatacaaacatg 26195482  T
Q  546 ctactttt 553  Q
    ||||||||    
T  26195483 ctactttt 26195490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 414 - 554
Target Start/End: Complemental strand, 10694938 - 10694798
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||| |||| ||||||  | |||||||||| |||| |||||| |||||||   ||  |||||||| |||||||||||||||||||||||||||    
T  10694938 gagaatgctaatcattatccttggtgtattggataaggggattaaaataaaaatatagtatttaaaaatggtaaaaagtgataaatttaactttttaaaa 10694839  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||||||||||||||||| ||||||||||||| ||||||||    
T  10694838 gtcaaaatgttgttgaaatcaatgcaaatatgatacttttg 10694798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 440 - 548
Target Start/End: Original strand, 25249345 - 25249453
Alignment:
Q  440 cattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgca 539  Q
    ||||||||||| || | |||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25249345 cattggataagggggtaaaaataaaaatatagcattggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaaaccaatgca 25249444  T
Q  540 aatatgcta 548  Q
    || ||||||    
T  25249445 aacatgcta 25249453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 192 - 349
Target Start/End: Complemental strand, 42910974 - 42910826
Alignment:
Q  192 attagtctatttggattgatcaatttagtttttgaatttgtctctaagggacacgtgagacagggaagtatgaattttagagatcatttctaaattttgt 291  Q
    |||| ||||||||||||||||||||||||||||||| ||||||  |||| |||  ||||||||||||||        ||||||||||||| |||||||||    
T  42910974 attaatctatttggattgatcaatttagtttttgaaattgtcttgaaggaacatatgagacagggaagt--------tagagatcatttcaaaattttgt 42910883  T
Q  292 taattttaaggatgtaattgtttgactctacattttcaaaaacgaaattgatgtttca 349  Q
    |||||| ||||||| |||||||| ||||||||||||||||||||||||||||| ||||    
T  42910882 taattt-aaggatggaattgtttaactctacattttcaaaaacgaaattgatggttca 42910826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 440 - 541
Target Start/End: Complemental strand, 8018866 - 8018765
Alignment:
Q  440 cattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgca 539  Q
    ||||||||||| |||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||    
T  8018866 cattggataaggggataaaaatagaaatataatattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatgttgttaaaactaatgca 8018767  T
Q  540 aa 541  Q
    ||    
T  8018766 aa 8018765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 445 - 554
Target Start/End: Complemental strand, 18069062 - 18068953
Alignment:
Q  445 gataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatat 544  Q
    |||||| |||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||    
T  18069062 gataaggggataaaaatagaaatatagcattggaaaatggtgaaaagtgataaatttaactttttaaaggtcaaaatgttgttgaaactaatgcaaacat 18068963  T
Q  545 gctacttttg 554  Q
      ||||||||    
T  18068962 tatacttttg 18068953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 414 - 536
Target Start/End: Complemental strand, 26672920 - 26672799
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||||||||| || |||||||||  |||| |||||||||||||| | |||||||||| | ||||  ||||||||||| |||||||||    
T  26672920 gagaatgctaaccattgtccttg-ggtattggataaagggataaaaatagaaatatagcattggaaaatgataaaaaaggataaatttaattttttaaaa 26672822  T
Q  514 gtcaaaatgttgttgaaaccaat 536  Q
    |||||||||||||||||||||||    
T  26672821 gtcaaaatgttgttgaaaccaat 26672799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 417 - 553
Target Start/End: Complemental strand, 37433392 - 37433258
Alignment:
Q  417 aatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtc 516  Q
    |||||||||||||||  ||| || |||||||||| |||| ||||| || ||||||| ||| |||||| ||||||||||||||||||||||||| |||||     
T  37433392 aatgctaaccattgtttttg-ggtattggataaggggataaaaatcgacatataacattgaaaaatgatgaaaagtgataaatttaacttttt-aaagtt 37433295  T
Q  517 aaaatgttgttgaaaccaatgcaaatatgctactttt 553  Q
    ||||||||||||||||||||||||| || ||||||||    
T  37433294 aaaatgttgttgaaaccaatgcaaacatactactttt 37433258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 416 - 555
Target Start/End: Original strand, 34713899 - 34714040
Alignment:
Q  416 gaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgt--tggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||||| |    |||| ||||| |||| |||||||| |||||  ||  || ||||||||| |||||||||||||| |||| ||||||    
T  34713899 gaatgctaaccattgtcctaggaatattgaataaggggataaaaatagatatatatagtattgaaaaatggtgcaaagtgataaatttcacttcttaaaa 34713998  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  34713999 gtcaaaatgttgttgaaaccaatgcaaacatgctacttttga 34714040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 414 - 554
Target Start/End: Complemental strand, 44874456 - 44874324
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    |||||| ||||  |||||| |||| |||||||||||| |||| |||||| ||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  44874456 gagaattctaattattgtctttgaagcattggataaggggataaaaatataaatataacattgaaaaatggtgaaaagtgataaatttaaatttttaaaa 44874357  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
            |||||||||||||||||||| ||||||||||||    
T  44874356 --------gttgttgaaaccaatgcaaacatgctacttttg 44874324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 414 - 556
Target Start/End: Original strand, 5129434 - 5129582
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||| ||||   ||||| |||||| |||| ||||| |||||||| | ||| |||||| ||||||||||||||||||| |||||||||    
T  5129434 gagaatgctaaccattgcccttagagcatttgataaggggataaaaattgaaatatagcattgaaaaatgatgaaaagtgataaatttaattttttaaaa 5129533  T
Q  514 gtcaaaatgttgttga------aaccaatgcaaatatgctacttttgaa 556  Q
    |||||||||||| | |      ||||||| |||||||||||||||||||    
T  5129534 gtcaaaatgttgataaaatgttaaccaatacaaatatgctacttttgaa 5129582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 414 - 554
Target Start/End: Complemental strand, 3174589 - 3174447
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    |||||||||||||||||||  |  ||| |||||| || |||| ||||||||||||| |  ||||||||||||||||| | |||||||| |||||||||||    
T  3174589 gagaatgctaaccattgtc--tagggcgttggatgaggggataaaaatagaaatattatattggaaaatggtgaaaaattataaatttgactttttaaaa 3174492  T
Q  514 gtca----aaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    ||||    ||||||||||||||||||| |||| ||||||||||||    
T  3174491 gtcaaaataaatgttgttgaaaccaatacaaacatgctacttttg 3174447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 446 - 554
Target Start/End: Complemental strand, 6433643 - 6433535
Alignment:
Q  446 ataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatg 545  Q
    ||||||| || |||||| ||||||| | ||| |||||||| |||||| |||||||||||||||||||||| ||||| ||||| ||||||||||||| ||     
T  6433643 ataagtgaataaaaataaaaatatagcattgaaaaatggtaaaaagttataaatttaactttttaaaagttaaaatattgttaaaaccaatgcaaagata 6433544  T
Q  546 ctacttttg 554  Q
    |||||||||    
T  6433543 ctacttttg 6433535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 485 - 555
Target Start/End: Original strand, 33741523 - 33741593
Alignment:
Q  485 tgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
    |||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||    
T  33741523 tgaaaaatgataaatttaactttttaaaagttaaaatattgttgaaaccaatgcaaatatgttacttttga 33741593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 446 - 554
Target Start/End: Original strand, 14855394 - 14855502
Alignment:
Q  446 ataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatg 545  Q
    ||||| |||| ||||||||||||||   ||  ||||| |||||||| |||||||||||| |||||||||| ||||||||||| |||| |||||||| |||    
T  14855394 ataaggggataaaaatagaaatatagtattaaaaaatagtgaaaagagataaatttaacattttaaaagttaaaatgttgttaaaactaatgcaaacatg 14855493  T
Q  546 ctacttttg 554  Q
    |||||||||    
T  14855494 ctacttttg 14855502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 447 - 532
Target Start/End: Complemental strand, 26892884 - 26892799
Alignment:
Q  447 taagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaac 532  Q
    |||| |||| |||||||||||||||  ||| ||||| || |||| |||||||||||||||||||||||| ||||| || |||||||    
T  26892884 taagaggataaaaatagaaatataatattgaaaaattgtaaaaaatgataaatttaactttttaaaagttaaaatattattgaaac 26892799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 414 - 513
Target Start/End: Complemental strand, 35930267 - 35930168
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||| ||||||||| |||||  ||||||||||||  ||| |||||| |||||||   ||| |||||| |||||| | ||||||||||||||||||||    
T  35930267 gagaatgataaccattgcccttggagcattggataagaagataaaaataaaaatatagtattgaaaaatgatgaaaaataataaatttaactttttaaaa 35930168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 441 - 555
Target Start/End: Original strand, 6396278 - 6396392
Alignment:
Q  441 attggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaa 540  Q
    ||||| |||||||||  ||||| ||||||   |||| ||||||||||| ||| || |||||||| ||||||| || |||||||||||||| | ||| |||    
T  6396278 attggttaagtggatataaataaaaatattgtgttgtaaaatggtgaagagtaatgaatttaacattttaaacgttaaaatgttgttgaatctaatacaa 6396377  T
Q  541 atatgctacttttga 555  Q
    |||| ||| ||||||    
T  6396378 atatactaattttga 6396392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 480 - 554
Target Start/End: Original strand, 20212433 - 20212507
Alignment:
Q  480 aatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||||||||||||||| ||||||| ||||||||||| ||||| | |||||| |||||| |||  |||||||||||    
T  20212433 aatggtgaaaagtgatgaatttaagtttttaaaagttaaaatatcgttgaatccaatgtaaacctgctacttttg 20212507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 438 - 515
Target Start/End: Complemental strand, 7532892 - 7532815
Alignment:
Q  438 ggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagt 515  Q
    |||||||| |||| |||| |||||||||||||    |||||||||||||||||||||| ||||||  |||||||||||    
T  7532892 ggcattggttaaggggataaaaatagaaatattgtattggaaaatggtgaaaagtgatgaatttaggtttttaaaagt 7532815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 457 - 554
Target Start/End: Complemental strand, 38870092 - 38869995
Alignment:
Q  457 aaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||||||||| ||  | |||||||||| ||||||||||  |||| ||| |||||||||||||||| ||| ||||  ||||| |||||| |||||||||    
T  38870092 aaaatagaaacattgcattggaaaatgatgaaaagtgaagaattcaacattttaaaagtcaaaatattgatgaattcaatgtaaatatactacttttg 38869995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 478 - 553
Target Start/End: Original strand, 37922972 - 37923046
Alignment:
Q  478 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctactttt 553  Q
    |||||||| |||||| || |||||||||||||| |||||||||| || ||||| |||||||||| || ||||||||    
T  37922972 aaaatggt-aaaagtaatgaatttaactttttagaagtcaaaatattattgaatccaatgcaaacatactactttt 37923046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 457 - 527
Target Start/End: Original strand, 31596442 - 31596512
Alignment:
Q  457 aaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgtt 527  Q
    |||||||||||||   |||  ||||||||||||| |||| ||||| ||||||||||||||||||| |||||    
T  31596442 aaaatagaaatattgtgttaaaaaatggtgaaaaatgatgaattttactttttaaaagtcaaaatattgtt 31596512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 438 - 551
Target Start/End: Original strand, 11332796 - 11332909
Alignment:
Q  438 ggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatg 537  Q
    |||||||| ||||  ||| |||||||||||||    |||  |||||||| |||||||  ||||||||||||||||||||||||  ||||||||  ||||     
T  11332796 ggcattggttaagaagataaaaatagaaatattgtattgagaaatggtgtaaagtgaagaatttaactttttaaaagtcaaaacattgttgaattcaata 11332895  T
Q  538 caaatatgctactt 551  Q
     |||||| ||||||    
T  11332896 taaatatactactt 11332909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 474 - 554
Target Start/End: Original strand, 39972190 - 39972270
Alignment:
Q  474 ttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||| ||||||||||||||||| ||||| ||||||||||||| ||||  ||||| ||  ||||||||| || ||| |||||    
T  39972190 ttgggaaatggtgaaaagtgatgaatttgactttttaaaagttaaaaaattgttcaattcaatgcaaacatactatttttg 39972270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 417 - 490
Target Start/End: Original strand, 19976471 - 19976545
Alignment:
Q  417 aatgctaaccattgtccttgaggcattggataagt-ggatgaaaatagaaatataacgttggaaaatggtgaaaa 490  Q
    |||||||||||||| | ||| ||| |||||||||| |||| ||| |||||||||||  ||| |||||||||||||    
T  19976471 aatgctaaccattgcctttggggctttggataagtgggataaaagtagaaatataatattgaaaaatggtgaaaa 19976545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 499 - 541
Target Start/End: Complemental strand, 30351637 - 30351595
Alignment:
Q  499 tttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaa 541  Q
    ||||||||||||||||| ||||| |||||||| ||||||||||    
T  30351637 tttaactttttaaaagttaaaatattgttgaatccaatgcaaa 30351595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 479 - 520
Target Start/End: Original strand, 11295507 - 11295548
Alignment:
Q  479 aaatggtgaaaagtgataaatttaactttttaaaagtcaaaa 520  Q
    ||||| |||||| |||| ||||||||||||||||||||||||    
T  11295507 aaatgatgaaaaatgatgaatttaactttttaaaagtcaaaa 11295548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 527
Target Start/End: Original strand, 17320000 - 17320045
Alignment:
Q  482 tggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgtt 527  Q
    |||||||||| ||| ||||||||||||||||||| ||||| |||||    
T  17320000 tggtgaaaagagatgaatttaactttttaaaagttaaaatattgtt 17320045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 564 - 601
Target Start/End: Complemental strand, 42910759 - 42910722
Alignment:
Q  564 agtatttggtaatttccaataaagatgtatcttaattc 601  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  42910759 agtatttggtaatttccaatagagatgcatcttaattc 42910722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 473 - 541
Target Start/End: Complemental strand, 4308881 - 4308813
Alignment:
Q  473 gttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaa 541  Q
    |||| |||||||| |||| |||| ||||||||||| ||||||| |||||  ||||||| ||||| ||||    
T  4308881 gttgaaaaatggtaaaaaatgatgaatttaactttataaaagttaaaatagtgttgaatccaatacaaa 4308813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 478 - 554
Target Start/End: Complemental strand, 24305008 - 24304933
Alignment:
Q  478 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||| ||||||||||||  |||||||| |||||||  ||||||| ||||||||  ||||| |||||| |||||||||    
T  24305008 aaaacggtgaaaagtgaagaatttaac-ttttaaagatcaaaattttgttgaattcaatgtaaatatactacttttg 24304933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 484 - 520
Target Start/End: Original strand, 39491855 - 39491891
Alignment:
Q  484 gtgaaaagtgataaatttaactttttaaaagtcaaaa 520  Q
    |||||||||||| ||||||||||||||||||| ||||    
T  39491855 gtgaaaagtgatgaatttaactttttaaaagttaaaa 39491891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 508 - 536
Target Start/End: Complemental strand, 41689126 - 41689098
Alignment:
Q  508 ttaaaagtcaaaatgttgttgaaaccaat 536  Q
    |||||||||||||||||||||||||||||    
T  41689126 ttaaaagtcaaaatgttgttgaaaccaat 41689098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 109; Significance: 2e-54; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 414 - 554
Target Start/End: Complemental strand, 34874698 - 34874558
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||| ||||| ||||||||||||| |||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||||||    
T  34874698 gagaatgctaaccattgcccttggggcattggataaggggataaaaatagaaatatagcattggaaaatggtgaaaagtgataaatttaattttttaaaa 34874599  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  34874598 gtcaaaatgttgttgaaaccaatgcaaacatgctacttttg 34874558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 414 - 554
Target Start/End: Original strand, 27209696 - 27209836
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||||||||| ||||||||||||  |||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  27209696 gagaatgctaaccattgtccttggggcattggataaagggataaaaatagaaatataacattggaaaatggtgaaaattgataaatttaactttttaaaa 27209795  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    || ||||||||||||||||||||||||| || |||||||||    
T  27209796 gttaaaatgttgttgaaaccaatgcaaacatcctacttttg 27209836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 414 - 555
Target Start/End: Original strand, 28850885 - 28851025
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||| ||||| |||||| |||||| | || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  28850885 gagaatgctaaccattgcccttggggcattagataagagaataaaaatagaaatataacattggaaaatggtgaaaagtgataaatttaactttttaaaa 28850984  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
    |||||||  |||||||||||||||||||||||||||||||||    
T  28850985 gtcaaaa-attgttgaaaccaatgcaaatatgctacttttga 28851025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 414 - 555
Target Start/End: Original strand, 41147453 - 41147594
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||| | ||| |||||||| |||| |||| |||||||||||||||||    
T  41147453 gagaatgctaaccattgtccttggggcattggataaggggataaaaatagaaatatagcattgaaaaatggtaaaaaatgattaatttaactttttaaaa 41147552  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
    |||||||| ||||||||||||||||||| |||||||||||||    
T  41147553 gtcaaaatattgttgaaaccaatgcaaacatgctacttttga 41147594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 414 - 554
Target Start/End: Complemental strand, 11386112 - 11385972
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||| ||||||||||||| | |||| ||||| ||||| |||||||||||||| | |||||||||||| |||| ||||||||||||||||||||||    
T  11386112 gagaatgctcaccattgtccttgggacattagataattggataaaaatagaaatatagcattggaaaatggtaaaaattgataaatttaactttttaaaa 11386013  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  11386012 gtcaaaatgttgttgaaaccaatgcaaacatgctacttttg 11385972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 414 - 554
Target Start/End: Original strand, 47655346 - 47655486
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||| |||| || ||||| ||||| |||| ||||||||| |||| | ||| ||||||||||||| ||||||||||||||||||||||    
T  47655346 gagaatgctaaccattgcccttaagacattgaataaggggataaaaatagaagtatagcattgaaaaatggtgaaaattgataaatttaactttttaaaa 47655445  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  47655446 gtcaaaatgttgttgaaaccaatgcaaacatgctacttttg 47655486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 417 - 554
Target Start/End: Original strand, 49508712 - 49508848
Alignment:
Q  417 aatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtc 516  Q
    |||| ||||||||| ||||| ||||||||||||| |||| |||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||    
T  49508712 aatgttaaccattgcccttggggcattggataaggggataaaaatagaaatatagcattggaaaatggtgaaa-gtgataaatttaactttttaaaagtc 49508810  T
Q  517 aaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    ||||| |||| |||||||||||||| ||||||||||||    
T  49508811 aaaatattgtcgaaaccaatgcaaacatgctacttttg 49508848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 414 - 554
Target Start/End: Original strand, 22346212 - 22346352
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||| ||||| ||| ||||||||| | || ||||||||||||||   ||| |||||||||||||||||||||||||| |||||||||    
T  22346212 gagaatgctaaccattgcccttggggctttggataagggaataaaaatagaaatatagtattgaaaaatggtgaaaagtgataaatttaattttttaaaa 22346311  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||||||| ||||||||||||||||||| ||||||||||||    
T  22346312 gtcaaaatattgttgaaaccaatgcaaacatgctacttttg 22346352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 414 - 554
Target Start/End: Complemental strand, 33930097 - 33929957
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||| ||||||||||| |||||  |||||||||| |||| |||||| ||||||| | ||| ||||| ||||||| ||||||||||||||||||||||    
T  33930097 gagaatgttaaccattgtctttgagatattggataaggggataaaaatataaatatagcattgaaaaatagtgaaaactgataaatttaactttttaaaa 33929998  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  33929997 gtcaaaatgttgttgaaaccaatgcaaacatgctacttttg 33929957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 414 - 553
Target Start/End: Original strand, 42607299 - 42607438
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||| ||||||||| ||||  || |||||||||| |||| |||||| ||||||| | ||| ||||||||||||| ||||||||||||||||||||||    
T  42607299 gagaatgttaaccattgcccttagggtattggataaggggataaaaataaaaatatagcattgaaaaatggtgaaaaatgataaatttaactttttaaaa 42607398  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctactttt 553  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  42607399 gtcaaaatgttgttgaaaccaatgcaaacatgctactttt 42607438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 414 - 555
Target Start/End: Original strand, 2125682 - 2125823
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    |||||||||||||||||| |||| ||||||||||||| |||| |||||||||||||| | ||| ||||| ||||||||||||||||||||||||||||||    
T  2125682 gagaatgctaaccattgttcttggggcattggataaggggataaaaatagaaatatagcattgaaaaattgtgaaaagtgataaatttaactttttaaaa 2125781  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
    |||||||||||| |||||| ||| |||  ||| |||||||||    
T  2125782 gtcaaaatgttgatgaaacaaatacaaccatgttacttttga 2125823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 414 - 537
Target Start/End: Original strand, 11385785 - 11385908
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||| ||||||| |||||  |||||||||||| |||| ||||||||||||||   ||||||||||||||||||| ||||||||||||||||||||    
T  11385785 gagaatgctgaccattgcccttgcagcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaagttataaatttaactttttaaaa 11385884  T
Q  514 gtcaaaatgttgttgaaaccaatg 537  Q
    ||||||||||||||||||||||||    
T  11385885 gtcaaaatgttgttgaaaccaatg 11385908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 417 - 553
Target Start/End: Original strand, 932135 - 932271
Alignment:
Q  417 aatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtc 516  Q
    |||| ||| |||||| |||| ||||||||||||| |||| |||||||||||||| | |||||||||| |||||| | |||||||||| ||||||||||||    
T  932135 aatgttaatcattgttcttggggcattggataaggggataaaaatagaaatatagcattggaaaatgatgaaaaattataaatttaattttttaaaagtc 932234  T
Q  517 aaaatgttgttgaaaccaatgcaaatatgctactttt 553  Q
    |||||||||||||||| |||||||| |||||||||||    
T  932235 aaaatgttgttgaaactaatgcaaacatgctactttt 932271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 414 - 554
Target Start/End: Complemental strand, 24140903 - 24140764
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||| | ||| ||||||| ||||| |||| ||||||||||||||   |||||||||||||||| |||||||| |||||||||| |||    
T  24140903 gagaatgctaaccattgcctttggggcattg-ataaggggataaaaatagaaatatactattggaaaatggtgaaacgtgataaacttaacttttttaaa 24140805  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||||||||||||||||||||||||||| |||||| |||||    
T  24140804 gtcaaaatgttgttgaaaccaatgcaaacatgctatttttg 24140764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 414 - 538
Target Start/End: Original strand, 32213864 - 32213988
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    |||||| ||||||||||  |||| | |||| |||||| |||| |||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||    
T  32213864 gagaatactaaccattgctcttgggacattagataaggggataaaaatagaaatagaacattggaaaatggtgaaaagtgataaatttaattttttaaaa 32213963  T
Q  514 gtcaaaatgttgttgaaaccaatgc 538  Q
    |||||||||||||||||||||||||    
T  32213964 gtcaaaatgttgttgaaaccaatgc 32213988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 414 - 553
Target Start/End: Original strand, 7190450 - 7190589
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||| ||| ||||| |||||||| |||| |||| |||||||||||||| | ||  |||||| |||||||||||||||||||||||||||||    
T  7190450 gagaatgctaacctttgcccttggggcattggttaagaggataaaaatagaaatatagcattcaaaaatgatgaaaagtgataaatttaactttttaaaa 7190549  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctactttt 553  Q
    || |||||| ||||||||| |||||||| |||||||||||    
T  7190550 gttaaaatggtgttgaaactaatgcaaacatgctactttt 7190589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 414 - 554
Target Start/End: Original strand, 4940715 - 4940855
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    |||||||||||||||||   | |  |||||||||||| |||| |||||||||||||| | |||||||||||| |||||||||||||||||||||||||||    
T  4940715 gagaatgctaaccattgctttaggcgcattggataaggggataaaaatagaaatatagcattggaaaatggttaaaagtgataaatttaactttttaaaa 4940814  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||||||| ||||| |||||||| |||| |||||| |||||    
T  4940815 gtcaaaatattgttaaaaccaatacaaacatgctatttttg 4940855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 417 - 541
Target Start/End: Complemental strand, 40845379 - 40845255
Alignment:
Q  417 aatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtc 516  Q
    |||||||||||||| ||||||| ||||| ||||| |||| ||||||||||||||   ||| |||||||||||||||||||||||||||||||||||| ||    
T  40845379 aatgctaaccattgcccttgagacattgaataaggggataaaaatagaaatatagtattgaaaaatggtgaaaagtgataaatttaactttttaaaaatc 40845280  T
Q  517 aaaatgttgttgaaaccaatgcaaa 541  Q
    ||||| ||||||||||||| |||||    
T  40845279 aaaatattgttgaaaccaaagcaaa 40845255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 414 - 554
Target Start/End: Complemental strand, 43433906 - 43433766
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    |||||||||||| ||||  |||| ||||||||||||| |||| ||||||||||||||   ||  ||||||||||||||||||||||||||||||||||||    
T  43433906 gagaatgctaactattgctcttggggcattggataaggggataaaaatagaaatatagtattaaaaaatggtgaaaagtgataaatttaactttttaaaa 43433807  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
     | |||||||||||||||||||| |||| || |||||||||    
T  43433806 attaaaatgttgttgaaaccaatacaaacatactacttttg 43433766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 414 - 555
Target Start/End: Original strand, 50295408 - 50295550
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||| ||| ||| ||| ||| ||||||||||||| || | ||||||||||||||   ||||||||| ||||||||||||||||||||||||||||||    
T  50295408 gagaatgttaatcatcgtctttggggcattggataagggggtaaaaatagaaatatagtattggaaaatagtgaaaagtgataaatttaactttttaaaa 50295507  T
Q  514 gtcaaaatgttgttgaaaccaatgc-aaatatgctacttttga 555  Q
    |||||||| ||||||||| |||||| ||| |||||||||||||    
T  50295508 gtcaaaatattgttgaaatcaatgcaaaacatgctacttttga 50295550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 434 - 555
Target Start/End: Original strand, 6170546 - 6170667
Alignment:
Q  434 ttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaacc 533  Q
    |||||| |||||||||   ||| |||||||||||||| | ||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  6170546 ttgaggtattggataaagagataaaaatagaaatatagcattggaaaatagagaaaaatgataaatttaactttttaaaagtcaaaatgttgttgaaacc 6170645  T
Q  534 aatgcaaatatgctacttttga 555  Q
    |||||||| ||| |||||||||    
T  6170646 aatgcaaacatgttacttttga 6170667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 441 - 554
Target Start/End: Complemental strand, 49902030 - 49901917
Alignment:
Q  441 attggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaa 540  Q
    |||||||||| |||| ||||||||||||||   ||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||    
T  49902030 attggataagaggataaaaatagaaatatagtattggaaaatggtgaaaagtgataaatttaactttttaaacgttaaaacgttgttgaaaccaatgcaa 49901931  T
Q  541 atatgctacttttg 554  Q
    | ||| ||||||||    
T  49901930 acatgatacttttg 49901917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 441 - 555
Target Start/End: Original strand, 28277484 - 28277598
Alignment:
Q  441 attggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaa 540  Q
    |||||||||| |||| |||||||||||||||| ||| |||||| | ||||||||||||||||||||||||||| | ||||||||||||||| ||||||||    
T  28277484 attggataagaggataaaaatagaaatataacattgaaaaatgataaaaagtgataaatttaactttttaaaaattaaaatgttgttgaaaacaatgcaa 28277583  T
Q  541 atatgctacttttga 555  Q
    | ||| |||||||||    
T  28277584 acatgttacttttga 28277598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 414 - 555
Target Start/End: Complemental strand, 29966954 - 29966812
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaa-ctttttaaa 512  Q
    ||||||| |||||||||||||||  |||||||||||| |||| |||||| ||||||| | ||| |||||||  |||| ||||||||||||  ||||| ||    
T  29966954 gagaatgttaaccattgtccttggagcattggataaggggataaaaatataaatatagcattgaaaaatggcaaaaaatgataaatttaattttttttaa 29966855  T
Q  513 agtcaaaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
    ||||||||| ||||||||||||||||||| |||||||||||||    
T  29966854 agtcaaaatattgttgaaaccaatgcaaacatgctacttttga 29966812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 414 - 541
Target Start/End: Complemental strand, 31975618 - 31975491
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||| |||||||| |||||||||   |||  ||||||||||||||| ||| |||||| | ||||||| |||||||||||||||||||    
T  31975618 gagaatgctaaccattgcccttgaggtattggataaagagatataaatagaaatataacattgaaaaatgataaaaagtggtaaatttaactttttaaaa 31975519  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaa 541  Q
     ||||||| ||||| |||| ||||||||    
T  31975518 atcaaaatattgttaaaactaatgcaaa 31975491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 414 - 555
Target Start/End: Complemental strand, 45721882 - 45721745
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||| ||||||||||| |||||  ||||||||||||  ||| |||||| ||||||||| |||||||||||| |||| ||||||||||||||||||||||    
T  45721882 gagaaggctaaccattg-ccttggagcattggataaggtgataaaaataaaaatataacattggaaaatggtaaaaactgataaatttaactttttaaaa 45721784  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
     ||||||   |||| ||| ||||||||| |||||||||||||    
T  45721783 atcaaaa---tgttaaaatcaatgcaaacatgctacttttga 45721745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 436 - 553
Target Start/End: Complemental strand, 52396551 - 52396435
Alignment:
Q  436 gaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaa 535  Q
    ||||||||||||||| |||| ||||||||||||||   ||| |||||| | ||||||||||||||||||||||||||||||||||| || ||||||| ||    
T  52396551 gaggcattggataaggggataaaaatagaaatatagtattgaaaaatgat-aaaagtgataaatttaactttttaaaagtcaaaatattattgaaacaaa 52396453  T
Q  536 tgcaaatatgctactttt 553  Q
    |||||| |||||| ||||    
T  52396452 tgcaaacatgctattttt 52396435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 414 - 518
Target Start/End: Complemental strand, 5945551 - 5945447
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    |||||||||||||||||||||||  |||||||||||    || ||||||||||||| || ||| |||||||||||||||||||||||| |||||||||||    
T  5945551 gagaatgctaaccattgtccttggagcattggataacgaaataaaaatagaaatatgacattgaaaaatggtgaaaagtgataaattttactttttaaaa 5945452  T
Q  514 gtcaa 518  Q
    |||||    
T  5945451 gtcaa 5945447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 440 - 541
Target Start/End: Complemental strand, 4656121 - 4656020
Alignment:
Q  440 cattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgca 539  Q
    |||||||||||   || |||||| ||||||||| ||||||||| || ||||||||||||||||||||||||||| | |||||||||||||||| ||||||    
T  4656121 cattggataaggaaataaaaataaaaatataacattggaaaatagtaaaaagtgataaatttaactttttaaaaattaaaatgttgttgaaactaatgca 4656022  T
Q  540 aa 541  Q
    ||    
T  4656021 aa 4656020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 414 - 554
Target Start/End: Complemental strand, 50154604 - 50154464
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||||| |||    ||| |||||   ||| |||||| ||||||| | ||| |||||| | |||| ||||||||||||| ||||||||    
T  50154604 gagaatgctaaccattgtcattggattattagataaaaagataaaaatataaatatagcattgaaaaatgataaaaaatgataaatttaaccttttaaaa 50154505  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    || ||||||||||||||||||||||||| ||| ||||||||    
T  50154504 gttaaaatgttgttgaaaccaatgcaaacatgttacttttg 50154464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 441 - 553
Target Start/End: Original strand, 26469584 - 26469696
Alignment:
Q  441 attggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaa 540  Q
    |||||||||  |||| |||||| ||||||| | ||| |||||  |||||| |||||||||||||||||||||||||||||| || |||||||||||| ||    
T  26469584 attggataaagggataaaaataaaaatatagcattgaaaaataatgaaaaatgataaatttaactttttaaaagtcaaaatattattgaaaccaatgaaa 26469683  T
Q  541 atatgctactttt 553  Q
    | || ||||||||    
T  26469684 acatactactttt 26469696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 478 - 554
Target Start/End: Complemental strand, 47895401 - 47895325
Alignment:
Q  478 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||||||||||| |||||||||||||||||||||| |||||||| |||||||||| |||||||| ||| ||||||||    
T  47895401 aaaatggtgaaaggtgataaatttaactttttaaatgtcaaaatattgttgaaactaatgcaaacatgttacttttg 47895325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 477 - 552
Target Start/End: Complemental strand, 30222689 - 30222613
Alignment:
Q  477 gaaaatggtgaaaagtgataaatttaactttttaaaa-gtcaaaatgttgttgaaaccaatgcaaatatgctacttt 552  Q
    ||||||| || |||||||||||||||| ||||||||| || ||||| ||||||||||||||||||||||||||||||    
T  30222689 gaaaatgatggaaagtgataaatttaattttttaaaaagttaaaatattgttgaaaccaatgcaaatatgctacttt 30222613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 414 - 553
Target Start/End: Complemental strand, 44287003 - 44286864
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    |||||||||||| ||| |||||| ||||||  ||||  |||| |||||| ||||| |   || || ||| ||||||| ||||||||||||||||||||||    
T  44287003 gagaatgctaactattatccttggggcattatataaaaggataaaaataaaaatacagtattagagaatagtgaaaaatgataaatttaactttttaaaa 44286904  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctactttt 553  Q
     | ||||| || || ||||||||||||| ||| |||||||    
T  44286903 attaaaatattattaaaaccaatgcaaacatgttactttt 44286864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 440 - 542
Target Start/End: Complemental strand, 40920292 - 40920188
Alignment:
Q  440 cattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtg--ataaatttaactttttaaaagtcaaaatgttgttgaaaccaatg 537  Q
    |||||| |||| |||| |||||||||||||  | |||  || ||||||||||||  || ||||||||||||||||||| ||||| |||||||| ||||||    
T  40920292 cattggttaagaggataaaaatagaaatattgcattgagaagtggtgaaaagtgtgattaatttaactttttaaaagttaaaatattgttgaatccaatg 40920193  T
Q  538 caaat 542  Q
    |||||    
T  40920192 caaat 40920188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 474 - 555
Target Start/End: Complemental strand, 43168212 - 43168131
Alignment:
Q  474 ttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
    |||| ||||||||||||||||  | ||||||||||||||||||||||  ||||||||  ||||| |||||| ||||||||||    
T  43168212 ttgggaaatggtgaaaagtgaagagtttaactttttaaaagtcaaaacattgttgaattcaatgtaaatatactacttttga 43168131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 478 - 530
Target Start/End: Complemental strand, 17403015 - 17402963
Alignment:
Q  478 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 530  Q
    |||||||| ||||||||| ||||||||||||||||||||||||| ||||||||    
T  17403015 aaaatggtaaaaagtgatgaatttaactttttaaaagtcaaaatattgttgaa 17402963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 554
Target Start/End: Original strand, 44359712 - 44359787
Alignment:
Q  479 aaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    ||||||||||||||||  ||||||||||||||||||||||||  ||||||||  ||||| |||||| ||| |||||    
T  44359712 aaatggtgaaaagtgaagaatttaactttttaaaagtcaaaacattgttgaattcaatgtaaatatactatttttg 44359787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 432 - 541
Target Start/End: Complemental strand, 41493021 - 41492913
Alignment:
Q  432 ccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaa 531  Q
    |||| ||||||||| |||| |||| |||||||||||||  | |||| || |||||||||||||| ||||| || |||||||||| ||||| ||| ||||     
T  41493021 ccttaaggcattggttaagaggat-aaaatagaaatattgcattgggaagtggtgaaaagtgatgaattttacattttaaaagttaaaatattgatgaat 41492923  T
Q  532 ccaatgcaaa 541  Q
    || |||||||    
T  41492922 cccatgcaaa 41492913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 477 - 554
Target Start/End: Complemental strand, 48938703 - 48938627
Alignment:
Q  477 gaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||||||||||||||||| ||||||| |||||||||||||||||  ||||||||   |||| |||||| |||||||||    
T  48938703 gaaaatggtgaaaagtgaaaaattta-ctttttaaaagtcaaaacattgttgaatttaatgtaaatatactacttttg 48938627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 474 - 554
Target Start/End: Complemental strand, 14331908 - 14331828
Alignment:
Q  474 ttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||| |||||||||||| |||  ||||||||||||||||||||||||  ||||||||  ||||| |||||| ||| |||||    
T  14331908 ttgggaaatggtgaaaaatgaagaatttaactttttaaaagtcaaaacattgttgaattcaatgtaaatatactatttttg 14331828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 478 - 530
Target Start/End: Original strand, 41898898 - 41898950
Alignment:
Q  478 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 530  Q
    |||||||| ||||||||| ||||||||||||||||||| ||||| ||||||||    
T  41898898 aaaatggtaaaaagtgatgaatttaactttttaaaagttaaaatattgttgaa 41898950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 474 - 553
Target Start/End: Original strand, 8892806 - 8892885
Alignment:
Q  474 ttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctactttt 553  Q
    ||||||||||||||||||| |  ||||||||||||||||||||||||  ||||| ||  ||||  |||||| ||||||||    
T  8892806 ttggaaaatggtgaaaagtaaagaatttaactttttaaaagtcaaaacattgttaaattcaatataaatatactactttt 8892885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 415 - 509
Target Start/End: Complemental strand, 8244219 - 8244128
Alignment:
Q  415 agaatgctaa-ccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaacttttt 509  Q
    |||||||||| ||||||  |||| ||||||||||||| |||| || ||||||||||||| ||||||||||    | | ||||||||||||||||||    
T  8244219 agaatgctaatccattgctcttggggcattggataaggggataaatatagaaatataacattggaaaatg----ataatgataaatttaacttttt 8244128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 473 - 526
Target Start/End: Original strand, 51046678 - 51046731
Alignment:
Q  473 gttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgt 526  Q
    |||| |||||||||||||||| | |||| ||||||||||||||||||| |||||    
T  51046678 gttgaaaaatggtgaaaagtgttgaattcaactttttaaaagtcaaaaagttgt 51046731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 459 - 515
Target Start/End: Complemental strand, 895016 - 894960
Alignment:
Q  459 aatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagt 515  Q
    ||||||||||| | |||||||| | |||||||||||| |||| ||||||||||||||    
T  895016 aatagaaatattatgttggaaagttgtgaaaagtgatgaattcaactttttaaaagt 894960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 494 - 530
Target Start/End: Original strand, 46296240 - 46296276
Alignment:
Q  494 ataaatttaactttttaaaagtcaaaatgttgttgaa 530  Q
    |||||||||||||||||||||||||||| ||||||||    
T  46296240 ataaatttaactttttaaaagtcaaaatattgttgaa 46296276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 473 - 520
Target Start/End: Complemental strand, 44043547 - 44043500
Alignment:
Q  473 gttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaa 520  Q
    |||| ||| |||| |||||||||| |||||||||||||||||||||||    
T  44043547 gttgtaaagtggtaaaaagtgatatatttaactttttaaaagtcaaaa 44043500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 432 - 530
Target Start/End: Complemental strand, 16691407 - 16691309
Alignment:
Q  432 ccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 530  Q
    ||||| |||||||| ||||  ||| |||||||||| ||    |||| ||||||| |||| |||  ||||||||||||||||||||||||  ||||||||    
T  16691407 ccttggggcattggttaagatgataaaaatagaaacattgtattgggaaatggtaaaaaatgaagaatttaactttttaaaagtcaaaacattgttgaa 16691309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 478 - 520
Target Start/End: Complemental strand, 27210792 - 27210750
Alignment:
Q  478 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaa 520  Q
    ||||||||||||| |||| ||||||||||||||||||| ||||    
T  27210792 aaaatggtgaaaaatgatcaatttaactttttaaaagttaaaa 27210750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 192 - 234
Target Start/End: Complemental strand, 28615785 - 28615743
Alignment:
Q  192 attagtctatttggattgatcaatttagtttttgaatttgtct 234  Q
    |||||||| ||| ||||||||||||||||||||||| ||||||    
T  28615785 attagtctctttagattgatcaatttagtttttgaaattgtct 28615743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 417 - 493
Target Start/End: Complemental strand, 4551193 - 4551117
Alignment:
Q  417 aatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtg 493  Q
    |||| |||||||||||||||| |||||||||||  | |  ||||||||||| |   ||||||||||| |||||||||    
T  4551193 aatgttaaccattgtccttgatgcattggataatggaacaaaaatagaaattttgtgttggaaaatgatgaaaagtg 4551117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 105; Significance: 4e-52; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 414 - 554
Target Start/End: Original strand, 26040338 - 26040478
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||   |||||||||||||||||||||||| |||||||||||||||    
T  26040338 gagaatgctaaccattgtccttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaagtgataagtttaactttttaaaa 26040437  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||||||| |||||||| |||||||||||||||||||||||    
T  26040438 gtcaaaatattgttgaagccaatgcaaatatgctacttttg 26040478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 414 - 554
Target Start/End: Original strand, 35808374 - 35808514
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||| ||||| ||||||||||||| |||| |||||||||||||| | ||||||||| ||||||| ||||||||||||||||||||||    
T  35808374 gagaatgctaaccattgcccttggggcattggataaggggataaaaatagaaatatagcattggaaaattgtgaaaaatgataaatttaactttttaaaa 35808473  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  35808474 gtcaaaatgttgttgaaaccaatgcaaacatgctacttttg 35808514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 414 - 554
Target Start/End: Original strand, 41956191 - 41956331
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||| ||||| ||||| ||||||| |||| |||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||    
T  41956191 gagaatgctaaccattgcccttggggcatcggataagaggataaaaatagaaatataacattggaaaatgatgaaaaatgataaatttaactttttaaaa 41956290  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    ||||||||||||||||| |||||||||| ||||||||||||    
T  41956291 gtcaaaatgttgttgaagccaatgcaaacatgctacttttg 41956331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 414 - 554
Target Start/End: Complemental strand, 55669870 - 55669730
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||| ||||| ||||||||||||| |||| |||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||    
T  55669870 gagaatgctaaccattgcccttggggcattggataaggggataaaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaactttttaaaa 55669771  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||||||||||||| ||| ||||||||| ||||||||||||    
T  55669770 gtcaaaatgttgttaaaaacaatgcaaacatgctacttttg 55669730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 414 - 541
Target Start/End: Complemental strand, 34016756 - 34016629
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||| | |||||||||||||||||||||| |||||||||||||||||    
T  34016756 gagaatgctaaccattgtccttgagacattggataaggggataaaaatagaaatatagcattggaaaatggtgaaaagtgatgaatttaactttttaaaa 34016657  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaa 541  Q
    |||||||||||||||||| |||||||||    
T  34016656 gtcaaaatgttgttgaaatcaatgcaaa 34016629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 414 - 554
Target Start/End: Original strand, 50514592 - 50514731
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    |||||||||||||||||  |||| | ||||||||||| |||| |||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||    
T  50514592 gagaatgctaaccattgctcttgtgacattggataagaggat-aaaatagaaatataacattgaaaaatggtaaaaagtgataaatttaactttttaaaa 50514690  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    || ||||||||||||||||||||||||| ||||||||||||    
T  50514691 gttaaaatgttgttgaaaccaatgcaaacatgctacttttg 50514731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 414 - 553
Target Start/End: Complemental strand, 23765709 - 23765570
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||| | |||  ||||| |||||| |||| ||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  23765709 gagaatgctaaccattgcctttggtgcattagataaggggataaaaattgaaatatagcattggaaaatggtgaaaagtgataaatttaactttttaaaa 23765610  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctactttt 553  Q
     ||||||||||||||||||||||||||| |||||||||||    
T  23765609 atcaaaatgttgttgaaaccaatgcaaacatgctactttt 23765570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 417 - 554
Target Start/End: Complemental strand, 45688871 - 45688734
Alignment:
Q  417 aatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtc 516  Q
    ||||||||||||||| |||| || |||||||||| |||| |||||||||| ||| | ||| |||||| ||||||||||||||||||||||||||||||||    
T  45688871 aatgctaaccattgttcttggggtattggataaggggataaaaatagaaacatagcattgaaaaatgatgaaaagtgataaatttaactttttaaaagtc 45688772  T
Q  517 aaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||||||||||||||| |||||||| ||||||||||||    
T  45688771 aaaatgttgttgaaactaatgcaaacatgctacttttg 45688734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 414 - 555
Target Start/End: Complemental strand, 31755069 - 31754928
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||| | ||| || |||||||||| |||| |||||| |||||||   ||| |||||| |||||||||||||||||||||||||||||    
T  31755069 gagaatgctaaccattgccattggggtattggataaggggataaaaatataaatatagaattgaaaaatgatgaaaagtgataaatttaactttttaaaa 31754970  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
    |||||||| ||||||||||||||||||| |||||||||||||    
T  31754969 gtcaaaatattgttgaaaccaatgcaaacatgctacttttga 31754928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 414 - 554
Target Start/End: Original strand, 34316700 - 34316841
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaa-tttaactttttaaa 512  Q
    ||||||||| ||||||| ||||| |||||||||||||  ||| |||||| ||||||||| ||| ||||| ||||||||||||||| ||||||||||||||    
T  34316700 gagaatgctcaccattgcccttggggcattggataaggagataaaaatataaatataacattgaaaaatagtgaaaagtgataaaatttaactttttaaa 34316799  T
Q  513 agtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    ||||||||| ||||||||||||||||||| ||||||||||||    
T  34316800 agtcaaaatattgttgaaaccaatgcaaacatgctacttttg 34316841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 414 - 555
Target Start/End: Complemental strand, 54339243 - 54339103
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||||| ||| ||||||||||||  |||| |||||| ||||||||| ||| ||||||||||||| |||||||||||| |||||||||    
T  54339243 gagaatgctaaccattgtcgttggggcattggataaagggataaaaatataaatataacattgaaaaatggtgaaaa-tgataaatttaattttttaaaa 54339145  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
    |||||||| || |||||||||||| |||||||||||||||||    
T  54339144 gtcaaaatatttttgaaaccaatgtaaatatgctacttttga 54339103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 414 - 554
Target Start/End: Complemental strand, 20811394 - 20811254
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    |||||||||||| |||| | ||| || |||  ||||| |||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  20811394 gagaatgctaactattgcctttggggtattaaataaggggataaaaatagaaatataacattggaaattggtgaaaagtgataaatttaactttttaaaa 20811295  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||||||||||||| ||| ||||||||| ||||||||||||    
T  20811294 gtcaaaatgttgttaaaatcaatgcaaacatgctacttttg 20811254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 414 - 555
Target Start/End: Original strand, 26831764 - 26831904
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    |||||||||||| |||||||||| ||||||| ||||| |||| |||||||||||||||  ||| |||||||| |||||||||||||||| ||||||||||    
T  26831764 gagaatgctaacaattgtccttggggcattgaataagaggataaaaatagaaatataatattgtaaaatggtaaaaagtgataaatttatctttttaaaa 26831863  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
     | ||||||||||||||| ||||||||| |||||||||||||    
T  26831864 attaaaatgttgttgaaa-caatgcaaacatgctacttttga 26831904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 414 - 555
Target Start/End: Original strand, 27839284 - 27839425
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||| ||||| ||||||||||||| | || |||||||||||||| | ||| |||||| |||||| |||||||||||| |||||||||    
T  27839284 gagaatgctaaccattgcccttggggcattggataagggaataaaaatagaaatatagcattgaaaaatgatgaaaaatgataaatttaagtttttaaaa 27839383  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
    ||||||||||| || ||||||||||||| |||||| ||||||    
T  27839384 gtcaaaatgttattaaaaccaatgcaaacatgctatttttga 27839425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 414 - 555
Target Start/End: Complemental strand, 2362762 - 2362619
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaa--ctttttaa 511  Q
    ||||||||||||||||| ||||| ||||| ||||||| |||| |||||| |||||||   ||||||||||||||||||||||||||||||   |||||||    
T  2362762 gagaatgctaaccattgcccttggggcatcggataaggggataaaaataaaaatatagtattggaaaatggtgaaaagtgataaatttaattttttttaa 2362663  T
Q  512 aagtcaaaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
    |||||||||||||||| ||||||||||||| || ||||||||||    
T  2362662 aagtcaaaatgttgttaaaaccaatgcaaacatactacttttga 2362619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 414 - 554
Target Start/End: Original strand, 10100091 - 10100231
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    |||||||||  | |||||||||| | ||| ||||||| |||| |||||| ||||||||  || |||||||||||||||| ||||||||||||||||||||    
T  10100091 gagaatgctgtctattgtccttgggacatcggataaggggataaaaatataaatataatattagaaaatggtgaaaagttataaatttaactttttaaaa 10100190  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||||||||||||||||||||||||||| ||| ||||||||    
T  10100191 gtcaaaatgttgttgaaaccaatgcaaacatgttacttttg 10100231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 414 - 555
Target Start/End: Complemental strand, 51267055 - 51266914
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||| |||||||||||  ||||   |||||||||||  ||| ||||||||||||||   ||| ||||||||||||||||||||||||||||||||||||    
T  51267055 gagaaggctaaccattgctcttggaacattggataaggagataaaaatagaaatatagtattgaaaaatggtgaaaagtgataaatttaactttttaaaa 51266956  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
    |||||||||||||||||| |||| |||| |||||||||||||    
T  51266955 gtcaaaatgttgttgaaatcaatacaaacatgctacttttga 51266914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 458 - 554
Target Start/End: Original strand, 19328950 - 19329046
Alignment:
Q  458 aaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    ||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  19328950 aaatagaaatatagcattggaaaatggtgaaatgtgataaatttaactttttaaaagtcaaaatattgttgaaaccaatgcaaacatgctacttttg 19329046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 414 - 553
Target Start/End: Complemental strand, 32131273 - 32131134
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||| ||||||||| |||||   ||||||||||   ||| ||||||||||||||   |||||||||||||| |||||||||||||||||||||||||    
T  32131273 gagaatgttaaccattgcccttggaacattggataaagagataaaaatagaaatatagtattggaaaatggtgataagtgataaatttaactttttaaaa 32131174  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctactttt 553  Q
    ||||| |||||||||||||||||||||| ||| |||||||    
T  32131173 gtcaagatgttgttgaaaccaatgcaaacatgttactttt 32131134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 414 - 554
Target Start/End: Complemental strand, 31168265 - 31168125
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    |||||||||||| |||| |||||  ||||| || ||| |||| ||||||||| | || | |||||||||||||||||||||||||||||| ||||| |||    
T  31168265 gagaatgctaactattgcccttggagcattagacaaggggataaaaatagaattttagcattggaaaatggtgaaaagtgataaatttaatttttttaaa 31168166  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||||||||||||||||||||||| ||| || |||||||||    
T  31168165 gtcaaaatgttgttgaaaccaatgtaaacattctacttttg 31168125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 416 - 554
Target Start/End: Complemental strand, 30475554 - 30475416
Alignment:
Q  416 gaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagt 515  Q
    ||||||||||||||| ||||  || ||||||||||  ||| |||||| |||||||   ||| ||||||||||||||||||||||||||||||||||| ||    
T  30475554 gaatgctaaccattgcccttagggtattggataaggagataaaaataaaaatatagtattgaaaaatggtgaaaagtgataaatttaactttttaaatgt 30475455  T
Q  516 caaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||||| ||||||||||||||||||| ||  ||||||||    
T  30475454 caaaatattgttgaaaccaatgcaaacatattacttttg 30475416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 474 - 554
Target Start/End: Original strand, 47188703 - 47188783
Alignment:
Q  474 ttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||    
T  47188703 ttggaaaatggtgaaaagtgataaatttaacttctaaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttg 47188783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 441 - 554
Target Start/End: Complemental strand, 33951804 - 33951691
Alignment:
Q  441 attggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaa 540  Q
    |||| ||||| |||| ||||||||||||||   ||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||| |||    
T  33951804 attgaataaggggataaaaatagaaatatagtattggaaaattgtgaaaagtgataaatttaactttttaaaaattaaaatgttgttgaaaccaatacaa 33951705  T
Q  541 atatgctacttttg 554  Q
    | ||| || |||||    
T  33951704 acatgttaattttg 33951691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 458 - 554
Target Start/End: Complemental strand, 52341688 - 52341592
Alignment:
Q  458 aaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||||||||||| | ||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||| |||||||||| || ||| |||||    
T  52341688 aaatagaaatattatgttggaaaatgatgaaaaatgatgaatttaactttttaaaagtcaaaatgttgttgaatccaatgcaaacatactaattttg 52341592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 414 - 510
Target Start/End: Original strand, 19876161 - 19876257
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaacttttta 510  Q
    |||||||||||| |||  |||||| |||||||||||| |||| ||||||||||||||   ||||||||| |||||||||||||||||||||||||||    
T  19876161 gagaatgctaacaattacccttgaagcattggataaggggataaaaatagaaatatagtattggaaaatagtgaaaagtgataaatttaacttttta 19876257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 414 - 502
Target Start/End: Complemental strand, 51290561 - 51290473
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaattta 502  Q
    ||||||||||||||||||||||| | ||||||||||| |||| ||| |||||||||| | |||||||||| ||||||||||||||||||    
T  51290561 gagaatgctaaccattgtccttgggacattggataaggggataaaattagaaatatagcattggaaaatgatgaaaagtgataaattta 51290473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 421 - 555
Target Start/End: Original strand, 53566935 - 53567072
Alignment:
Q  421 ctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtg---ataaatttaactttttaaaagtca 517  Q
    |||||||||||| ||| |||||||| |||   ||| |||||||||||||| | ||| ||||| || ||||||    |||||||||||||||||||||| |    
T  53566935 ctaaccattgtctttggggcattggttaaagagataaaaatagaaatatagcattgaaaaatagtaaaaagtactaataaatttaactttttaaaagtta 53567034  T
Q  518 aaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
    |||||||||||||||  ||||||| |||||||||||||    
T  53567035 aaatgttgttgaaactcatgcaaacatgctacttttga 53567072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 432 - 555
Target Start/End: Original strand, 35675186 - 35675309
Alignment:
Q  432 ccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaa 531  Q
    ||||| |||||||| ||||  ||| |||||||||||||    |||| |||| |||||||||||| ||||||||||||||||||| ||||| ||||||||     
T  35675186 ccttggggcattggttaagacgataaaaatagaaatattgtattgggaaatagtgaaaagtgatgaatttaactttttaaaagttaaaatattgttgaat 35675285  T
Q  532 ccaatgcaaatatgctacttttga 555  Q
     ||||||||| || ||||||||||    
T  35675286 tcaatgcaaacatactacttttga 35675309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 416 - 554
Target Start/End: Complemental strand, 40436210 - 40436072
Alignment:
Q  416 gaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagt 515  Q
    |||| ||||| |||||| ||| | ||||||||||| |||| |||||  ||| ||| | ||  |||||| |||||| | |||||||||||||||||||  |    
T  40436210 gaattctaacgattgtctttgggacattggataaggggataaaaatgaaaaaatagcattaaaaaatgatgaaaaataataaatttaactttttaaatat 40436111  T
Q  516 caaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||||| ||||||||||||| ||||| ||||||||||||    
T  40436110 caaaatattgttgaaaccaaagcaaacatgctacttttg 40436072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 493 - 555
Target Start/End: Original strand, 9693528 - 9693590
Alignment:
Q  493 gataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||| |||||| ||||||    
T  9693528 gataaatttaactttttaaaagtcgaaatattgttgaaaccaatgcaaacatgctatttttga 9693590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 415 - 523
Target Start/End: Complemental strand, 31487851 - 31487743
Alignment:
Q  415 agaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaag 514  Q
    |||||| ||||||||| |||||  |||||| ||||| |||| |||||| ||||||| | ||| ||||| || ||||||||||||||| ||||||||||      
T  31487851 agaatgttaaccattgcccttggagcattgaataaggggataaaaataaaaatatagcattgaaaaatagttaaaagtgataaatttgactttttaaaga 31487752  T
Q  515 tcaaaatgt 523  Q
    |||||||||    
T  31487751 tcaaaatgt 31487743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 440 - 520
Target Start/End: Original strand, 35511184 - 35511264
Alignment:
Q  440 cattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaa 520  Q
    |||||| ||||| |||||||||||||||||    |||||||||||||||||||||| ||||| ||||||||||||| ||||    
T  35511184 cattggttaagtagatgaaaatagaaatattgtattggaaaatggtgaaaagtgatgaatttgactttttaaaagttaaaa 35511264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 464 - 554
Target Start/End: Complemental strand, 45088148 - 45088061
Alignment:
Q  464 aaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    ||||||| | |||||||||| ||||||||||||||||||| ||||| |||||||||||   ||||||| ||||||||| || |||||||||    
T  45088148 aaatatagcattggaaaatgatgaaaagtgataaatttaattttttgaaagtcaaaat---gttgaaatcaatgcaaacatactacttttg 45088061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 461 - 555
Target Start/End: Complemental strand, 3769897 - 3769803
Alignment:
Q  461 tagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
    |||||||||  | ||| |||||||||||||||||||||||| ||||||||||||| ||||| ||||| ||  |||||||||  | ||||||||||    
T  3769897 tagaaatattgcattgaaaaatggtgaaaagtgataaatttgactttttaaaagttaaaatattgttaaattcaatgcaaacctactacttttga 3769803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 478 - 553
Target Start/End: Complemental strand, 15986333 - 15986258
Alignment:
Q  478 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctactttt 553  Q
    |||||||||||||||| | ||||||| ||||||||||||| ||| ||||||||  ||||||||| || ||||||||    
T  15986333 aaaatggtgaaaagtggtgaatttaaatttttaaaagtcagaatattgttgaattcaatgcaaacattctactttt 15986258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 444 - 555
Target Start/End: Complemental strand, 20456670 - 20456559
Alignment:
Q  444 ggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaata 543  Q
    ||||||| |||| ||||||||||| |    ||| |||||| |||||||| || ||||||| |||||||| || ||||| ||||||||  ||||||||| |    
T  20456670 ggataagaggataaaaatagaaatgttttattgaaaaatgatgaaaagttatgaatttaaatttttaaatgttaaaatattgttgaattcaatgcaaaca 20456571  T
Q  544 tgctacttttga 555  Q
    ||||||||||||    
T  20456570 tgctacttttga 20456559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 474 - 529
Target Start/End: Complemental strand, 46823543 - 46823488
Alignment:
Q  474 ttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttga 529  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||  |||||||    
T  46823543 ttggaaaatggtgaaaagttatgaatttaactttttaaaagtcaaaaaattgttga 46823488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 438 - 540
Target Start/End: Complemental strand, 30618056 - 30617954
Alignment:
Q  438 ggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatg 537  Q
    |||||||| |||| |||| || ||||||||||  | |||| ||||| |||||||  || |||||||||||||||||||  |||| |||||||| ||||||    
T  30618056 ggcattggttaagaggataaacatagaaatattgcattgggaaatgatgaaaagcaatgaatttaactttttaaaagttcaaatattgttgaatccaatg 30617957  T
Q  538 caa 540  Q
    |||    
T  30617956 caa 30617954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 414 - 500
Target Start/End: Original strand, 46695940 - 46696026
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatt 500  Q
    ||||||| |||| |||| | ||| || ||||||||||||||| |||||| |||||||   ||| |||||||||||||||||||||||    
T  46695940 gagaatgttaactattgcctttggggtattggataagtggataaaaataaaaatataggattgaaaaatggtgaaaagtgataaatt 46696026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 429 - 537
Target Start/End: Original strand, 13498110 - 13498218
Alignment:
Q  429 tgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttg 528  Q
    ||||||||| ||||||| ||||  ||| |||||||||||||    ||||||||| || || |  ||| ||||||||||||||||||||||||  ||||||    
T  13498110 tgtccttgatgcattggttaagatgataaaaatagaaatattgtattggaaaatagtaaagaacgatgaatttaactttttaaaagtcaaaactttgttg 13498209  T
Q  529 aaaccaatg 537  Q
    || ||||||    
T  13498210 aatccaatg 13498218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 477 - 541
Target Start/End: Original strand, 35927315 - 35927379
Alignment:
Q  477 gaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaa 541  Q
    ||||||||||||||  ||| ||||||||||||||||||| ||||| |||||||| | ||||||||    
T  35927315 gaaaatggtgaaaaacgatgaatttaactttttaaaagttaaaatattgttgaatctaatgcaaa 35927379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 474 - 530
Target Start/End: Original strand, 36486724 - 36486780
Alignment:
Q  474 ttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 530  Q
    |||||||||||||||||||||  ||||||| ||||||||||||||||| || |||||    
T  36486724 ttggaaaatggtgaaaagtgaagaatttaattttttaaaagtcaaaatattattgaa 36486780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 457 - 553
Target Start/End: Original strand, 51018400 - 51018496
Alignment:
Q  457 aaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctactttt 553  Q
    |||||||||| ||  | ||| |||||||||||||||||  ||||||||||||||||| | ||||  ||||||||  ||||| |||||| ||||||||    
T  51018400 aaaatagaaacattgcattgaaaaatggtgaaaagtgaagaatttaactttttaaaaattaaaacattgttgaattcaatgtaaatatactactttt 51018496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 415 - 509
Target Start/End: Original strand, 9693361 - 9693454
Alignment:
Q  415 agaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaacttttt 509  Q
    |||| ||||||||||||| |||  |||||||||||| |||| |||||| | ||||||  || ||||| |||||||| |||||||||||| |||||    
T  9693361 agaacgctaaccattgtctttggcgcattggataaggggataaaaataaagatataatatt-gaaaaaggtgaaaaatgataaatttaaattttt 9693454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 478 - 540
Target Start/End: Complemental strand, 48513686 - 48513624
Alignment:
Q  478 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaa 540  Q
    |||||| |||||||||| | |||||||||||||||||||||||  ||||||||  ||||||||    
T  48513686 aaaatgatgaaaagtgaaagatttaactttttaaaagtcaaaacattgttgaattcaatgcaa 48513624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 474 - 515
Target Start/End: Original strand, 11996141 - 11996182
Alignment:
Q  474 ttggaaaatggtgaaaagtgataaatttaactttttaaaagt 515  Q
    ||||||||||||||||||||||| |||||||||| |||||||    
T  11996141 ttggaaaatggtgaaaagtgatagatttaactttctaaaagt 11996182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 457 - 541
Target Start/End: Original strand, 1457556 - 1457640
Alignment:
Q  457 aaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaa 541  Q
    ||||||||||||| || ||| ||| |  | |||| |||||||||||| ||||||||||| ||||| ||||||||  |||||||||    
T  1457556 aaaatagaaatattacattgaaaagtaataaaaattgataaatttaattttttaaaagttaaaatattgttgaattcaatgcaaa 1457640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 414 - 466
Target Start/End: Original strand, 19328725 - 19328777
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaa 466  Q
    |||||||||||||||||| |||  ||||||||||||| |||| ||||||||||    
T  19328725 gagaatgctaaccattgttcttagggcattggataaggggataaaaatagaaa 19328777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 438 - 537
Target Start/End: Complemental strand, 29462908 - 29462809
Alignment:
Q  438 ggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatg 537  Q
    |||||||  |||| |||| |||||| |||||| |  ||| |||||| |||||| |||  ||||| | ||||| |||||||||||||||||||| ||||||    
T  29462908 ggcattgtttaagaggataaaaataaaaatattatattgaaaaatgatgaaaaatgaggaattttattttttcaaagtcaaaatgttgttgaatccaatg 29462809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 479 - 554
Target Start/End: Original strand, 31494704 - 31494779
Alignment:
Q  479 aaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    ||||||||||||||||  |||||||||||||||| | |||||  ||||||||  ||||| ||||||  ||||||||    
T  31494704 aaatggtgaaaagtgaagaatttaactttttaaatgacaaaacattgttgaattcaatgtaaatatattacttttg 31494779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 520
Target Start/End: Original strand, 20435828 - 20435874
Alignment:
Q  474 ttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaa 520  Q
    ||||||||| |||||||||||  ||||||||||||||||| ||||||    
T  20435828 ttggaaaattgtgaaaagtgaagaatttaactttttaaaaatcaaaa 20435874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 520
Target Start/End: Complemental strand, 49483168 - 49483122
Alignment:
Q  474 ttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaa 520  Q
    ||||||||||||||||||||||| |||| ||||||| ||||| ||||    
T  49483168 ttggaaaatggtgaaaagtgatagatttgactttttcaaagttaaaa 49483122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 479 - 512
Target Start/End: Complemental strand, 1801668 - 1801635
Alignment:
Q  479 aaatggtgaaaagtgataaatttaactttttaaa 512  Q
    |||||||||||||| |||||||||||||||||||    
T  1801668 aaatggtgaaaagttataaatttaactttttaaa 1801635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 530
Target Start/End: Original strand, 32584560 - 32584613
Alignment:
Q  477 gaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 530  Q
    ||||||||| |||||| || |||| |||||||||||||| ||||| ||||||||    
T  32584560 gaaaatggtaaaaagtaatgaattcaactttttaaaagttaaaatattgttgaa 32584613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 474 - 555
Target Start/End: Original strand, 39158364 - 39158445
Alignment:
Q  474 ttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
    |||| ||| |||||||||||||  |||||||||||||||| | ||||| ||||| ||  ||||| ||| || ||||||||||    
T  39158364 ttgggaaagggtgaaaagtgatctatttaactttttaaaaattaaaatattgttcaattcaatgtaaacatactacttttga 39158445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 474 - 527
Target Start/End: Complemental strand, 40593672 - 40593620
Alignment:
Q  474 ttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgtt 527  Q
    |||| |||| |||||||||||| |||||||| |||||||||||| |||||||||    
T  40593672 ttgggaaatagtgaaaagtgatgaatttaac-ttttaaaagtcataatgttgtt 40593620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 479 - 520
Target Start/End: Complemental strand, 52895790 - 52895749
Alignment:
Q  479 aaatggtgaaaagtgataaatttaactttttaaaagtcaaaa 520  Q
    |||| ||||||||||| || ||||||||||||||||||||||    
T  52895790 aaattgtgaaaagtgaaaattttaactttttaaaagtcaaaa 52895749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 487 - 555
Target Start/End: Original strand, 31010478 - 31010546
Alignment:
Q  487 aaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
    ||||||||  ||||||||||||||||||||||||  ||| ||||    ||| |||||||||||||||||    
T  31010478 aaaagtgaagaatttaactttttaaaagtcaaaacattgctgaattatatgtaaatatgctacttttga 31010546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 104; Significance: 2e-51; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 414 - 553
Target Start/End: Original strand, 8715480 - 8715618
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||||||||  ||||||||||||| || | |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  8715480 gagaatgctaaccattgtccttagggcattggataagggg-taaaaatagaaatatagcattggaaaatggtgaaaagtgataaatttaactttttaaaa 8715578  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctactttt 553  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  8715579 gtcaaaatgttgttgaaaccaatgcaaacatgctactttt 8715618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 414 - 553
Target Start/End: Original strand, 9067367 - 9067505
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||||||||  ||||||||||||| || | |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  9067367 gagaatgctaaccattgtccttagggcattggataagggg-taaaaatagaaatatagcattggaaaatggtgaaaagtgataaatttaactttttaaaa 9067465  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctactttt 553  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  9067466 gtcaaaatgttgttgaaaccaatgcaaacatgctactttt 9067505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 416 - 554
Target Start/End: Complemental strand, 46317615 - 46317477
Alignment:
Q  416 gaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagt 515  Q
    ||||||||||||||| ||||||| |||||||||||| ||| |||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||    
T  46317615 gaatgctaaccattgcccttgagacattggataagtagataaaaatagaaatataacattggaaaatgatgaaaaatgataaatttaactttttaaaagt 46317516  T
Q  516 caaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||||||||||||||||||||||||| ||| ||||||||    
T  46317515 caaaatgttgttgaaaccaatgcaaacatgttacttttg 46317477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 414 - 554
Target Start/End: Original strand, 44570364 - 44570504
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||| ||||| |||||| |||||  |||| |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  44570364 gagaatgctaaccattgcccttggggcattcgataaagggatcaaaatagaaatataacattggaaaatggtgaaaagtgataactttaactttttaaaa 44570463  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||||||||||||||||| ||||||||| ||||||||||||    
T  44570464 gtcaaaatgttgttgaaatcaatgcaaacatgctacttttg 44570504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 414 - 554
Target Start/End: Original strand, 36730131 - 36730271
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||| ||||  ||||||||||||| |||| |||||| |||||||   ||| ||||||||||||||||||||||||||||||||||||    
T  36730131 gagaatgctaaccattgcccttatggcattggataaggggataaaaatataaatatagtattgaaaaatggtgaaaagtgataaatttaactttttaaaa 36730230  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  36730231 gtcaaaatgttgttgaaaccaatgcaaacatgctacttttg 36730271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 414 - 555
Target Start/End: Complemental strand, 37509242 - 37509101
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||| | ||| ||||||||||||| |||| ||||| |||||  | | ||||||||| ||||||||||||||||||||||||||||||    
T  37509242 gagaatgctaaccattgcctttggggcattggataaggggataaaaattgaaatgcagcattggaaaatagtgaaaagtgataaatttaactttttaaaa 37509143  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
    |||||||| ||||||||||||||||||||||| |||||||||    
T  37509142 gtcaaaatattgttgaaaccaatgcaaatatgttacttttga 37509101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 414 - 554
Target Start/End: Original strand, 4759828 - 4759968
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    |||||||||||||||||   |||  |||||||||||  |||| |||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||    
T  4759828 gagaatgctaaccattgcatttggagcattggataaagggataaaaatagaaatatagcattgaaaaatggtgaaaagtgataaatttaactttttaaaa 4759927  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||||||||||||||||||||||||||| ||| ||||||||    
T  4759928 gtcaaaatgttgttgaaaccaatgcaaacatgttacttttg 4759968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 414 - 554
Target Start/End: Complemental strand, 32415700 - 32415560
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||| ||| ||||| ||||||||||||||||||  |||| |||||||||||||| | ||| ||||| ||||||||| ||||||||||||||||||||    
T  32415700 gagaatgttaatcattgcccttgaggcattggataaagggataaaaatagaaatatagcattgaaaaattgtgaaaagtcataaatttaactttttaaaa 32415601  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||||||||||||||||||||||||||| ||| ||||||||    
T  32415600 gtcaaaatgttgttgaaaccaatgcaaacatgttacttttg 32415560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 415 - 554
Target Start/End: Complemental strand, 35306462 - 35306323
Alignment:
Q  415 agaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaag 514  Q
    ||||| |||||||||| ||||| |  |||||||||| |||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  35306462 agaatactaaccattgcccttgggcaattggataaggggataaaaatagaaatataacattggaaaatgatgaaaagtgataaatttaactttttaaaag 35306363  T
Q  515 tcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    | |||||||| |||||| ||||||||| ||||||||||||    
T  35306362 ttaaaatgttattgaaatcaatgcaaacatgctacttttg 35306323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 414 - 554
Target Start/End: Original strand, 29915553 - 29915693
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||| ||||| ||| ||||||||| |||| |||||| |||||||   |||||||||||| |||| | ||||||||||||||||||||    
T  29915553 gagaatgctaaccattgcccttggggcgttggataaggggataaaaataaaaatatagtattggaaaatggtaaaaaattataaatttaactttttaaaa 29915652  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||||||||| ||||||||||||||||| || |||||||||    
T  29915653 gtcaaaatgtggttgaaaccaatgcaaacattctacttttg 29915693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 414 - 554
Target Start/End: Original strand, 29964706 - 29964846
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||| ||||| ||| ||||||||| |||| |||||| |||||||   |||||||||||| |||| | ||||||||||||||||||||    
T  29964706 gagaatgctaaccattgcccttggggcgttggataaggggataaaaataaaaatatagtattggaaaatggtaaaaaattataaatttaactttttaaaa 29964805  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||||||||| ||||||||||||||||| || |||||||||    
T  29964806 gtcaaaatgtggttgaaaccaatgcaaacattctacttttg 29964846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 414 - 554
Target Start/End: Original strand, 44695649 - 44695789
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||| ||||||| ||| | ||||||||||| |||| |||||| ||||||||  ||||||||||||||||| ||||||||||||||||||||||    
T  44695649 gagaatgctaatcattgtcattgggacattggataaggggataaaaatataaatataatcttggaaaatggtgaaaaatgataaatttaactttttaaaa 44695748  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
     | ||||||||||||||| ||||||||| ||| ||||||||    
T  44695749 attaaaatgttgttgaaatcaatgcaaacatgttacttttg 44695789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 416 - 554
Target Start/End: Complemental strand, 10854992 - 10854850
Alignment:
Q  416 gaatgctaaccattgtccttgaggcattggataagtggatg----aaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaa 511  Q
    ||||| ||| ||||| ||||| ||||||||||||| |||||    ||| |||||||||| | ||||||||||||||||| | ||||||||||||||||||    
T  10854992 gaatgttaatcattgcccttggggcattggataaggggatggataaaagtagaaatatagcattggaaaatggtgaaaactaataaatttaactttttaa 10854893  T
Q  512 aagtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||| ||||||||||||||||||||||||| ||||||||||||    
T  10854892 aagttaaaatgttgttgaaaccaatgcaaacatgctacttttg 10854850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 417 - 554
Target Start/End: Original strand, 51817294 - 51817430
Alignment:
Q  417 aatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtc 516  Q
    |||||||| |||| |||||  ||||||| ||||| |||| |||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  51817294 aatgctaatcatt-tcctttgggcattgaataagaggataaaaataaaaatatagcattggaaaatggtgaaaagtgataaatttaactttttaaaagtc 51817392  T
Q  517 aaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    ||||| |||||||||| ||| |||| ||||||||||||    
T  51817393 aaaatattgttgaaactaatacaaacatgctacttttg 51817430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 445 - 553
Target Start/End: Original strand, 12905292 - 12905399
Alignment:
Q  445 gataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatat 544  Q
    |||||| |||| |||||||||||||||| ||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| ||    
T  12905292 gataaggggataaaaatagaaatataacattg-aaaatggtgaaaaatgataaatttaacattttaaaagtcaaaatgttgttgaaaccaatgcaaacat 12905390  T
Q  545 gctactttt 553  Q
    |||||||||    
T  12905391 gctactttt 12905399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 414 - 554
Target Start/End: Original strand, 25102300 - 25102439
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||| ||||| | ||||||||||   ||| |||||||||||||| | |||||||||||| |||||||||||| |||| ||||| |||    
T  25102300 gagaatgctaaccattgcccttgggacattggataatgagataaaaatagaaatatagcattggaaaatggtaaaaagtgataaa-ttaatttttttaaa 25102398  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    || ||||| ||||||||||||||||||||||||||||||||    
T  25102399 gttaaaatattgttgaaaccaatgcaaatatgctacttttg 25102439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 440 - 554
Target Start/End: Original strand, 8847456 - 8847570
Alignment:
Q  440 cattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgca 539  Q
    ||||||||||| |||| |||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||||||| ||||| |    
T  8847456 cattggataaggggataaaaatagaaatataacattggaaaatggtaaaaagtgattaatttaactttttaaaagttaaaatattgttgaaaacaatgta 8847555  T
Q  540 aatatgctacttttg 554  Q
    || ||||||||||||    
T  8847556 aacatgctacttttg 8847570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 457 - 554
Target Start/End: Complemental strand, 52570870 - 52570771
Alignment:
Q  457 aaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaa--atatgctacttttg 554  Q
    ||||||||||||||   |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||    
T  52570870 aaaatagaaatatagtattggaaaatggtgaaaagtgataaatataactttttaaaagtcaaaatattgttgaaaccaatgcaaacatatgctacttttg 52570771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 461 - 555
Target Start/End: Original strand, 20227405 - 20227499
Alignment:
Q  461 tagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
    |||||||||| | ||| |||||| |||||||||||||||||||||| |||||||| |||||||| ||||||||||| |||| ||| |||||||||    
T  20227405 tagaaatatagcattgaaaaatgatgaaaagtgataaatttaacttcttaaaagttaaaatgttattgaaaccaatacaaacatgttacttttga 20227499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 457 - 554
Target Start/End: Complemental strand, 12051126 - 12051029
Alignment:
Q  457 aaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    ||||||||||||||   ||| |||||  |||||| |||||||||||||||||||||| | ||||||||||||||| ||||||||| ||||||||||||    
T  12051126 aaaatagaaatatagtattgtaaaataatgaaaaatgataaatttaactttttaaaaattaaaatgttgttgaaaacaatgcaaacatgctacttttg 12051029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 485 - 554
Target Start/End: Complemental strand, 31647364 - 31647295
Alignment:
Q  485 tgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||    
T  31647364 tgaaaaatgataaatttaactttttaaaagtcaaaatgttattgaaatcaatgcaaacatgctacttttg 31647295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 414 - 514
Target Start/End: Complemental strand, 1804019 - 1803919
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||| ||||||||||| ||||||||||||| |||| ||||||||||||||   ||| |||| ||| |||| |||||||||||||||| |||||    
T  1804019 gagaatgctaatcattgtccttggggcattggataaggggataaaaatagaaatatattattgaaaaagggtaaaaaatgataaatttaactttgtaaaa 1803920  T
Q  514 g 514  Q
    |    
T  1803919 g 1803919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 433 - 554
Target Start/End: Original strand, 45899540 - 45899662
Alignment:
Q  433 cttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaa-gtgataaatttaactttttaaaagtcaaaatgttgttgaaa 531  Q
    |||| ||||||||||||| | || ||||||||||||| |  |||||||||| |||||| ||||| ||||||| ||||||||||||||||| ||||||||     
T  45899540 cttggggcattggataagagaataaaaatagaaatattatattggaaaatgatgaaaaagtgatgaatttaaatttttaaaagtcaaaatattgttgaat 45899639  T
Q  532 ccaatgcaaatatgctacttttg 554  Q
     ||||| ||| || |||||||||    
T  45899640 tcaatgtaaacatactacttttg 45899662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 414 - 504
Target Start/End: Original strand, 48136701 - 48136790
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaac 504  Q
    ||||||||||||||||||||||| || |||||||||| | || |||||||||||||| | ||||||||| ||| |||||||||||||||||    
T  48136701 gagaatgctaaccattgtccttggggtattggataagggaataaaaatagaaatatagcattggaaaattgtg-aaagtgataaatttaac 48136790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 438 - 537
Target Start/End: Original strand, 18789 - 18888
Alignment:
Q  438 ggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatg 537  Q
    |||||||| |||| |||| |||||||||||||  | |||| ||| ||||||||||||| ||||||||||||||||| | ||||| |||||||| ||||||    
T  18789 ggcattggttaagaggataaaaatagaaatattgcattgggaaacggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaatccaatg 18888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 474 - 541
Target Start/End: Complemental strand, 11317037 - 11316970
Alignment:
Q  474 ttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaa 541  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||| || ||||| | ||||||||    
T  11317037 ttggaaaatggtgaaaagttatgaatttaactttttaaaagtcaaaatattattgaatctaatgcaaa 11316970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 478 - 541
Target Start/End: Original strand, 34060808 - 34060871
Alignment:
Q  478 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaa 541  Q
    |||||||||||||||||| ||||||||||||||||||| ||||| ||||||||  |||||||||    
T  34060808 aaaatggtgaaaagtgatgaatttaactttttaaaagttaaaatattgttgaattcaatgcaaa 34060871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 478 - 541
Target Start/End: Complemental strand, 41346042 - 41345979
Alignment:
Q  478 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaa 541  Q
    ||||| ||||||||| |||||||||| ||||||||||| ||||| |||||||||||||||||||    
T  41346042 aaaatagtgaaaagtaataaatttaattttttaaaagttaaaatattgttgaaaccaatgcaaa 41345979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 457 - 537
Target Start/End: Original strand, 18949 - 19029
Alignment:
Q  457 aaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatg 537  Q
    |||||||||||||  | |||| ||| ||||||||||||| ||||||||||||||||| | ||||| |||||||| ||||||    
T  18949 aaaatagaaatattgcattgggaaacggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaatccaatg 19029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 414 - 470
Target Start/End: Complemental strand, 41346405 - 41346349
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatata 470  Q
    ||||||| ||||||||||||||| ||||||||||||| |||| ||||||||||||||    
T  41346405 gagaatgttaaccattgtccttggggcattggataaggggataaaaatagaaatata 41346349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 457 - 540
Target Start/End: Complemental strand, 21324603 - 21324521
Alignment:
Q  457 aaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaa 540  Q
    |||||||||||||  | ||||||| || |||||||||||| |||||||||||||||||| ||||| |||||||| || ||||||    
T  21324603 aaaatagaaatattgcattggaaa-tgatgaaaagtgatagatttaactttttaaaagttaaaatattgttgaatccgatgcaa 21324521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 480 - 527
Target Start/End: Original strand, 49976185 - 49976232
Alignment:
Q  480 aatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgtt 527  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||    
T  49976185 aatggtgaaaagtgatgaatttaactttttaaaagtcaaaatattgtt 49976232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 460 - 515
Target Start/End: Complemental strand, 33641337 - 33641282
Alignment:
Q  460 atagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagt 515  Q
    |||||||||| | |||||||| ||||||||| ||||||||| ||||||||||||||    
T  33641337 atagaaatattatgttggaaattggtgaaaaatgataaattcaactttttaaaagt 33641282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 474 - 541
Target Start/End: Original strand, 34750295 - 34750362
Alignment:
Q  474 ttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaa 541  Q
    ||||||| |||||||||||||| |||||||||||||| || | ||||| |||||||| ||||| ||||    
T  34750295 ttggaaactggtgaaaagtgatgaatttaactttttataaattaaaatattgttgaatccaatacaaa 34750362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 473 - 526
Target Start/End: Complemental strand, 41998954 - 41998901
Alignment:
Q  473 gttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgt 526  Q
    |||| |||||||||||||||| |||||| |||||| ||||||| ||||||||||    
T  41998954 gttgaaaaatggtgaaaagtgttaaattcaactttataaaagtaaaaatgttgt 41998901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 477 - 536
Target Start/End: Original strand, 39974847 - 39974906
Alignment:
Q  477 gaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaat 536  Q
    ||||||| ||| ||||||| ||||||||||||||||||| |||||  ||||||| |||||    
T  39974847 gaaaatgatgagaagtgatgaatttaactttttaaaagttaaaatagtgttgaatccaat 39974906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 487 - 541
Target Start/End: Complemental strand, 50420742 - 50420688
Alignment:
Q  487 aaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaa 541  Q
    |||||||||| |||||||||||||||||| ||||  ||||||||  |||||||||    
T  50420742 aaaagtgatagatttaactttttaaaagttaaaaaattgttgaattcaatgcaaa 50420688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 459 - 512
Target Start/End: Complemental strand, 9189308 - 9189255
Alignment:
Q  459 aatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaa 512  Q
    ||||||||||| | |||||||| |||| ||||||||| |||| |||||||||||    
T  9189308 aatagaaatattatgttggaaagtggtaaaaagtgatgaattcaactttttaaa 9189255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 497 - 538
Target Start/End: Complemental strand, 11675361 - 11675320
Alignment:
Q  497 aatttaactttttaaaagtcaaaatgttgttgaaaccaatgc 538  Q
    |||||||||||||||| |||||||| |||||||| |||||||    
T  11675361 aatttaactttttaaatgtcaaaatattgttgaatccaatgc 11675320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 452 - 521
Target Start/End: Original strand, 26850510 - 26850579
Alignment:
Q  452 ggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaat 521  Q
    |||| |||||| |||||| |  || ||||||||| ||||||||| ||||||| ||||||||||| |||||    
T  26850510 ggataaaaatataaatattatattagaaaatggtaaaaagtgatgaatttaattttttaaaagttaaaat 26850579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 474 - 530
Target Start/End: Original strand, 12060097 - 12060153
Alignment:
Q  474 ttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 530  Q
    |||||||||| |||||||||||| |||| | ||||||||||| ||||  ||||||||    
T  12060097 ttggaaaatgatgaaaagtgatagatttgagtttttaaaagttaaaaaattgttgaa 12060153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 434 - 510
Target Start/End: Original strand, 13647034 - 13647110
Alignment:
Q  434 ttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaacttttta 510  Q
    |||| ||||| | |||| |||| |||||||||||||    ||| ||||| |||||||||||| ||||||||||||||    
T  13647034 ttgaagcatttgttaagaggataaaaatagaaatattggattgaaaaatagtgaaaagtgatgaatttaacttttta 13647110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 474 - 530
Target Start/End: Original strand, 48313876 - 48313932
Alignment:
Q  474 ttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 530  Q
    |||| ||||||||||||| || |||||| ||||||||||| ||||||  ||||||||    
T  48313876 ttgggaaatggtgaaaagcgaaaaatttgactttttaaaaatcaaaacattgttgaa 48313932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 2e-51; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 414 - 541
Target Start/End: Original strand, 765128 - 765255
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||| ||||| ||||||||||||| |||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  765128 gagaatgctaaccattgcccttggggcattggataaggggataaaaatagaaatataacattggaaaattgtgaaaagtgataaatttaactttttaaaa 765227  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaa 541  Q
    ||||||||||||||||||||||||||||    
T  765228 gtcaaaatgttgttgaaaccaatgcaaa 765255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 414 - 553
Target Start/End: Complemental strand, 2966671 - 2966532
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||   || | | ||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  2966671 gagaatgctaaccatttatctggggacattggataaggggataaaaatagaaatataacattggaaaatggtgaaaagtgataaatttaattttttaaaa 2966572  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctactttt 553  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  2966571 gtcaaaatgttgttgaaaccaatgcaaatatgctactttt 2966532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 414 - 554
Target Start/End: Original strand, 39401513 - 39401652
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||| ||||| ||||||||||||| |||| |||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||    
T  39401513 gagaatgctaaccattgcccttggggcattggataaggggataaaaatagaaatataacattgaaaaatggtgaaaagtgat-aatttaactttttaaaa 39401611  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||||||| |||||||||||||| |||| ||||||||||||    
T  39401612 gtcaaaattttgttgaaaccaatacaaacatgctacttttg 39401652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 414 - 554
Target Start/End: Original strand, 17095045 - 17095184
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    |||||||||||||||||| |||  ||||||||||||  |||| ||||||||||||||||  |  ||||||||||||||||||||||||||||||||||||    
T  17095045 gagaatgctaaccattgttcttagggcattggataaagggataaaaatagaaatataactcta-aaaatggtgaaaagtgataaatttaactttttaaaa 17095143  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  17095144 gtcaaaatgttgttgaaaccaatgcaaatatgctatttttg 17095184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 414 - 555
Target Start/End: Complemental strand, 27495254 - 27495113
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    |||||||||||||||||  |||| ||||||| ||||| |||| |||||| ||||||||| || |||||||||||||||||||||||||||| ||||||||    
T  27495254 gagaatgctaaccattgcacttggggcattgaataaggggataaaaataaaaatataacattagaaaatggtgaaaagtgataaatttaacattttaaaa 27495155  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
     ||||||||||||||||||||||||||| || ||||||||||    
T  27495154 atcaaaatgttgttgaaaccaatgcaaacatactacttttga 27495113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 417 - 555
Target Start/End: Original strand, 39085773 - 39085911
Alignment:
Q  417 aatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtc 516  Q
    ||||||||||||||  |||| | ||||||||||  |||| |||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||    
T  39085773 aatgctaaccattgctcttgggacattggataaagggataaaaatagaaatataacattggaaaatgataaaaagtgataaatttaactttttaaaagtc 39085872  T
Q  517 aaaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
    ||||||||||||||| ||||||||| ||||| |||||||    
T  39085873 aaaatgttgttgaaatcaatgcaaacatgctgcttttga 39085911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 414 - 554
Target Start/End: Original strand, 17056036 - 17056175
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||| ||||  ||||||||||||  |||| |||| |||||||||||  |  ||||||||||||||||||||||||||||||||||||    
T  17056036 gagaatgctaaccattgcccttagggcattggataaagggataaaaaaagaaatataacacta-aaaatggtgaaaagtgataaatttaactttttaaaa 17056134  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    | ||||||||||||||||||||||||||||||||| |||||    
T  17056135 gacaaaatgttgttgaaaccaatgcaaatatgctatttttg 17056175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 414 - 554
Target Start/End: Original strand, 17068483 - 17068622
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||| ||||  ||||||||||||  |||| |||| |||||||||||  |  ||||||||||||||||||||||||||||||||||||    
T  17068483 gagaatgctaaccattgcccttagggcattggataaagggataaaaaaagaaatataacacta-aaaatggtgaaaagtgataaatttaactttttaaaa 17068581  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    | ||||||||||||||||||||||||||||||||| |||||    
T  17068582 gacaaaatgttgttgaaaccaatgcaaatatgctatttttg 17068622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 415 - 554
Target Start/End: Complemental strand, 862719 - 862580
Alignment:
Q  415 agaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaag 514  Q
    ||||||||||| |||| ||||  ||||||| ||||  |||| ||||||||||||||   |||||||||||||||||||||||||||||||||||||| ||    
T  862719 agaatgctaacaattgcccttagggcattgaataatgggataaaaatagaaatatagtattggaaaatggtgaaaagtgataaatttaactttttaagag 862620  T
Q  515 tcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    ||||||| ||||||||||||||||||| ||||||||||||    
T  862619 tcaaaatcttgttgaaaccaatgcaaacatgctacttttg 862580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 414 - 548
Target Start/End: Complemental strand, 1321299 - 1321165
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    |||||||||||||||||||||||  |||||||||||| |||| |||||||||||||||| |||||||||||| |||| | |||||||||||| |||||||    
T  1321299 gagaatgctaaccattgtccttggagcattggataagaggataaaaatagaaatataacattggaaaatggtaaaaaataataaatttaactctttaaaa 1321200  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgcta 548  Q
     ||||||||||||||||| ||||| ||| ||||||    
T  1321199 atcaaaatgttgttgaaatcaatgtaaacatgcta 1321165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 417 - 554
Target Start/End: Complemental strand, 16361694 - 16361557
Alignment:
Q  417 aatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtc 516  Q
    ||||||||| |||| |||||  |||||||||||| | || |||||||||||||||| |||||||||||| |||| |||||||||||||||| ||||||||    
T  16361694 aatgctaacaattgcccttggagcattggataagggaataaaaatagaaatataacattggaaaatggtaaaaattgataaatttaactttataaaagtc 16361595  T
Q  517 aaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||||||||| |||||||||||||| ||| ||||||||    
T  16361594 aaaatgttgtcgaaaccaatgcaaacatgttacttttg 16361557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 414 - 551
Target Start/End: Complemental strand, 33864486 - 33864349
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||| ||||||||| ||||||| ||||| ||||| |||| |||||| ||||||  | ||||||||||||||||||| ||||||||||| ||||||||    
T  33864486 gagaatgttaaccattgcccttgagacattgaataagaggataaaaataaaaatatcgcattggaaaatggtgaaaagtaataaatttaacattttaaaa 33864387  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctactt 551  Q
    |||||||| ||||||||||||||||||||||| |||||    
T  33864386 gtcaaaatattgttgaaaccaatgcaaatatgttactt 33864349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 438 - 554
Target Start/End: Complemental strand, 6999309 - 6999193
Alignment:
Q  438 ggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatg 537  Q
    |||| ||||||||  ||| ||||||||||||||   ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  6999309 ggcaatggataaggagataaaaatagaaatatagtattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatg 6999210  T
Q  538 caaatatgctacttttg 554  Q
    |||| ||||||||||||    
T  6999209 caaacatgctacttttg 6999193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 414 - 554
Target Start/End: Original strand, 17074466 - 17074605
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||| ||||  |||||| |||||  |||| ||||||||||||||||  |  ||||||||||||||||||||||||||||||||||||    
T  17074466 gagaatgctaaccattgcccttagggcattagataaagggataaaaatagaaatataacacta-aaaatggtgaaaagtgataaatttaactttttaaaa 17074564  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    | ||||||||||||||||| ||||||||||||||| |||||    
T  17074565 gacaaaatgttgttgaaactaatgcaaatatgctatttttg 17074605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 414 - 555
Target Start/End: Complemental strand, 41436609 - 41436468
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||| |||||||||| |||| |  |||| ||||| |||| |||||| |||||||   ||| |||||| |||||||||||||| ||||||||||||||    
T  41436609 gagaatggtaaccattgttcttgggatattgaataaggggataaaaataaaaatatagtattgaaaaatgatgaaaagtgataaacttaactttttaaaa 41436510  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  41436509 gtcaaaatgttgttgaaaccaatgcaaacatgctacttttga 41436468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 421 - 555
Target Start/End: Original strand, 35445275 - 35445410
Alignment:
Q  421 ctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaacttttt-aaaagtcaaa 519  Q
    |||||||||  ||||  ||||||| ||||| |||| |||||| ||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||    
T  35445275 ctaaccattacccttagggcattgaataaggggataaaaatataaatataacattgaaaaatggtgaaaagtgataaatttaactttttcaaaagtcaaa 35445374  T
Q  520 atgttgttgaaaccaatgcaaatatgctacttttga 555  Q
    || |||||||||||||| |||| |||||||||||||    
T  35445375 atattgttgaaaccaatacaaacatgctacttttga 35445410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 426 - 555
Target Start/End: Original strand, 9201485 - 9201613
Alignment:
Q  426 cattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttg 525  Q
    ||||||||||||| ||||||||||   ||| ||||||| |||||||  ||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9201485 cattgtccttgagacattggataatgagataaaaataggaatataatattaaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttg 9201584  T
Q  526 ttgaaaccaatgcaaatatgctacttttga 555  Q
    ||| ||||||| |||| ||| |||||||||    
T  9201585 ttg-aaccaatacaaacatgttacttttga 9201613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 414 - 537
Target Start/End: Original strand, 44299659 - 44299782
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||| |||||   ||| |||||||| |||| |||| |||||||||||||| | | | ||||||||||||||||||||||||||| ||||||||    
T  44299659 gagaatgctaatcattgcttttggggcattgggtaagaggataaaaatagaaatatagcctcgaaaaatggtgaaaagtgataaatttaacattttaaaa 44299758  T
Q  514 gtcaaaatgttgttgaaaccaatg 537  Q
    |||||||| |||||||||||||||    
T  44299759 gtcaaaatattgttgaaaccaatg 44299782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 421 - 548
Target Start/End: Complemental strand, 17603935 - 17603808
Alignment:
Q  421 ctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaa 520  Q
    |||| ||||| ||||| ||||||||||||   ||| |||||||||||||| | ||| |||||| | |||| |||||||||||||||||||||||||||||    
T  17603935 ctaatcattgcccttggggcattggataacgcgataaaaatagaaatatagcattgaaaaatgataaaaaatgataaatttaactttttaaaagtcaaaa 17603836  T
Q  521 tgttgttgaaaccaatgcaaatatgcta 548  Q
    |||| |||||| ||||||||| ||||||    
T  17603835 tgttattgaaatcaatgcaaacatgcta 17603808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 440 - 554
Target Start/End: Original strand, 17118377 - 17118490
Alignment:
Q  440 cattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgca 539  Q
    ||||||||||  |||| |||||||||||||||   ||||||||| |||||| |||||||||||||||||||||| || ||||||||||||||||||||||    
T  17118377 cattggataaagggataaaaatagaaatataatactggaaaatgttgaaaaatgataaatttaactttttaaaactc-aaatgttgttgaaaccaatgca 17118475  T
Q  540 aatatgctacttttg 554  Q
    |||||| || |||||    
T  17118476 aatatgttatttttg 17118490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 474 - 554
Target Start/End: Original strand, 23685690 - 23685770
Alignment:
Q  474 ttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||| ||||||||    
T  23685690 ttggaaaatggggaaaagtgataaatttaactttttaaaagtcaaaatgttattgaaatcaatgcaaacatgttacttttg 23685770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 414 - 548
Target Start/End: Original strand, 13997882 - 13998016
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    |||||||||||||||||   |||||| ||| |||||| | || |||||||||||||| | ||| ||||| ||||||| ||||||||||||||||||||||    
T  13997882 gagaatgctaaccattgcttttgaggaattagataagggaataaaaatagaaatatagcattgaaaaattgtgaaaaatgataaatttaactttttaaaa 13997981  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgcta 548  Q
     | ||||| ||||||||| |||| |||| ||||||    
T  13997982 attaaaatattgttgaaatcaatacaaacatgcta 13998016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 427 - 555
Target Start/End: Complemental strand, 33726498 - 33726370
Alignment:
Q  427 attgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgt 526  Q
    |||| ||||| ||||||||||||| |||| |||||| |||||||   ||| ||||||||||||| | |||||||||||||| ||||||| ||||| ||||    
T  33726498 attgcccttggggcattggataaggggataaaaataaaaatatagtattgaaaaatggtgaaaaataataaatttaactttctaaaagttaaaatattgt 33726399  T
Q  527 tgaaaccaatgcaaatatgctacttttga 555  Q
    ||||| |||| |||| |||||| ||||||    
T  33726398 tgaaatcaatacaaacatgctatttttga 33726370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 414 - 541
Target Start/End: Complemental strand, 44173250 - 44173123
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||||  ||| | |||| |||||   ||| |||||||||||||| | ||| |||||| |||||| |||||||||||| |||||||||    
T  44173250 gagaatgctaaccattgtttttgggacatttgataatatgataaaaatagaaatatagcattgaaaaatgatgaaaaatgataaatttaattttttaaaa 44173151  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaa 541  Q
     | |||||||||||||||||||| ||||    
T  44173150 attaaaatgttgttgaaaccaatacaaa 44173123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 485 - 555
Target Start/End: Complemental strand, 15004987 - 15004917
Alignment:
Q  485 tgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||| |||| ||| |||||||||    
T  15004987 tgaaaagtgataaatttaactttttaaaaattaaaatgttgttgaaaccaatacaaacatgatacttttga 15004917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 422 - 532
Target Start/End: Original strand, 43140309 - 43140419
Alignment:
Q  422 taaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaat 521  Q
    |||| ||||||||||||  |||||||||| |||| |||||| ||||||||| ||| ||||||  ||||| |||||||||||||||||||||| | |||||    
T  43140309 taactattgtccttgagatattggataagaggataaaaataaaaatataacattgaaaaatgacgaaaaatgataaatttaactttttaaaattaaaaat 43140408  T
Q  522 gttgttgaaac 532  Q
     || |||||||    
T  43140409 attattgaaac 43140419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 414 - 553
Target Start/End: Complemental strand, 464927 - 464787
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaag-tgataaatttaactttttaaa 512  Q
    ||||||| ||| ||||||| |||  | ||| |||||  |||| |||||||||||||||| ||| |||||||| ||||  |||||| ||||||||||||||    
T  464927 gagaatgttaatcattgtctttggagtatttgataaagggataaaaatagaaatataacattgaaaaatggtaaaaaaatgataattttaactttttaaa 464828  T
Q  513 agtcaaaatgttgttgaaaccaatgcaaatatgctactttt 553  Q
    ||| |||||||| |||||| |||| |||| ||| |||||||    
T  464827 agttaaaatgttattgaaatcaatacaaacatgttactttt 464787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 440 - 554
Target Start/End: Complemental strand, 2239687 - 2239573
Alignment:
Q  440 cattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgca 539  Q
    |||||| |||| |||| || ||||||||||  |  || |||||||| |||| |||| ||||||||||||||||||| ||||| |||||||| ||||| ||    
T  2239687 cattggttaagaggataaagatagaaatattgcaatgaaaaatggtaaaaaatgatgaatttaactttttaaaagttaaaatattgttgaatccaataca 2239588  T
Q  540 aatatgctacttttg 554  Q
    ||||| |||||||||    
T  2239587 aatatactacttttg 2239573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 496 - 554
Target Start/End: Original strand, 11445379 - 11445437
Alignment:
Q  496 aaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||    
T  11445379 aaatttaactttttaaatgtcaaaatgttgttgaaaccaatgcaaacatgttacttttg 11445437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 458 - 509
Target Start/End: Original strand, 11445313 - 11445364
Alignment:
Q  458 aaatagaaatataacgttggaaaatggtgaaaagtgataaatttaacttttt 509  Q
    ||||||||||||||| ||| ||||||||||||| ||||||||||||||||||    
T  11445313 aaatagaaatataacattgaaaaatggtgaaaaatgataaatttaacttttt 11445364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 440 - 530
Target Start/End: Original strand, 34220650 - 34220740
Alignment:
Q  440 cattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 530  Q
    |||||| |||| |||| ||||||||||| |  | |||| || |||||||||||||| ||||||| ||||||||||| ||||| ||||||||    
T  34220650 cattggttaagaggataaaaatagaaatcttgcattgggaagtggtgaaaagtgatgaatttaagtttttaaaagttaaaatattgttgaa 34220740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 474 - 530
Target Start/End: Original strand, 747529 - 747585
Alignment:
Q  474 ttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 530  Q
    ||||||||| ||||||||||||| |||||||||||||||||| ||||  ||||||||    
T  747529 ttggaaaatagtgaaaagtgatagatttaactttttaaaagttaaaaaattgttgaa 747585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 451 - 555
Target Start/End: Original strand, 10900265 - 10900369
Alignment:
Q  451 tggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctact 550  Q
    ||||| ||||||||||||| || ||| |||||| | ||||||||| ||||| | ||||||||||| ||||| || |||||  ||||| |||||| ||| |    
T  10900265 tggataaaaatagaaatatcacattgaaaaatgataaaaagtgatgaattttattttttaaaagttaaaatattattgaattcaatgtaaatatactatt 10900364  T
Q  551 tttga 555  Q
    |||||    
T  10900365 tttga 10900369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 442 - 553
Target Start/End: Original strand, 34334167 - 34334278
Alignment:
Q  442 ttggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaa 541  Q
    |||||||||  ||| |||||||||||||    || ||||||||| |||| ||| ||||| ||||||||| || | ||||| |||||||| ||||| ||||    
T  34334167 ttggataagatgataaaaatagaaatattgtatttgaaaatggtaaaaaatgacaaattaaactttttacaaattaaaatattgttgaatccaatacaaa 34334266  T
Q  542 tatgctactttt 553  Q
     |||||||||||    
T  34334267 catgctactttt 34334278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 452 - 558
Target Start/End: Original strand, 3454714 - 3454819
Alignment:
Q  452 ggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctactt 551  Q
    |||| ||||||||||||| |  ||  || ||||| ||||||||||| ||||||||||||||||| ||||| ||||||||  |||| ||||  | ||||||    
T  3454714 ggatcaaaatagaaatattatattaaaagatggtaaaaagtgataactttaactttttaaaagt-aaaatattgttgaattcaatacaaaattactactt 3454812  T
Q  552 ttgaaac 558  Q
    |||||||    
T  3454813 ttgaaac 3454819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 478 - 554
Target Start/End: Complemental strand, 11659329 - 11659253
Alignment:
Q  478 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    ||||| |||||||||||  ||||||||||||||||| | ||||| ||||||||  ||||| |||||| || ||||||    
T  11659329 aaaatagtgaaaagtgaagaatttaactttttaaaaattaaaatattgttgaattcaatgtaaatatactgcttttg 11659253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 530
Target Start/End: Original strand, 29260167 - 29260222
Alignment:
Q  475 tggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 530  Q
    |||||||||||||||||||||| |||| |||||| |||||| ||||  ||||||||    
T  29260167 tggaaaatggtgaaaagtgatagatttgacttttaaaaagttaaaaaattgttgaa 29260222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 477 - 520
Target Start/End: Complemental strand, 34512714 - 34512671
Alignment:
Q  477 gaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaa 520  Q
    |||||||||||||||||||| |||| ||||||||||||| ||||    
T  34512714 gaaaatggtgaaaagtgatagatttgactttttaaaagttaaaa 34512671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 452 - 530
Target Start/End: Complemental strand, 2136529 - 2136451
Alignment:
Q  452 ggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 530  Q
    |||| |||||||||||||  | |||||||||| |||||||||   ||||| |||||| |||||| ||||| ||||||||    
T  2136529 ggataaaaatagaaatattgcattggaaaatgatgaaaagtggagaatttgacttttgaaaagtgaaaatattgttgaa 2136451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 515
Target Start/End: Original strand, 2958506 - 2958548
Alignment:
Q  473 gttggaaaatggtgaaaagtgataaatttaactttttaaaagt 515  Q
    |||||||| ||||||||||| || |||||||||||||||||||    
T  2958506 gttggaaagtggtgaaaagttatgaatttaactttttaaaagt 2958548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 479 - 521
Target Start/End: Original strand, 9965098 - 9965140
Alignment:
Q  479 aaatggtgaaaagtgataaatttaactttttaaaagtcaaaat 521  Q
    |||||||||||| | || |||||||||||||||||||||||||    
T  9965098 aaatggtgaaaaattatgaatttaactttttaaaagtcaaaat 9965140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 478 - 512
Target Start/End: Complemental strand, 37230287 - 37230253
Alignment:
Q  478 aaaatggtgaaaagtgataaatttaactttttaaa 512  Q
    ||||||||||||||||||||| |||||||||||||    
T  37230287 aaaatggtgaaaagtgataaacttaactttttaaa 37230253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 487 - 553
Target Start/End: Complemental strand, 2805441 - 2805373
Alignment:
Q  487 aaaagtgataaatttaacttttt--aaaagtcaaaatgttgttgaaaccaatgcaaatatgctactttt 553  Q
    ||||||||| |||||||||||||  |||||||||||| |||||||| | ||| |||| || ||||||||    
T  2805441 aaaagtgatgaatttaactttttttaaaagtcaaaatattgttgaatctaatacaaacatactactttt 2805373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 521
Target Start/End: Complemental strand, 8327085 - 8327004
Alignment:
Q  440 cattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaat 521  Q
    |||||| |||| |||| |||||| ||||||  | |||  ||||  |||||||||| |||||||||||||||||||| |||||    
T  8327085 cattggttaagaggataaaaataaaaatattgctttgagaaataatgaaaagtgaaaaatttaactttttaaaagttaaaat 8327004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 474 - 506
Target Start/End: Original strand, 31911203 - 31911235
Alignment:
Q  474 ttggaaaatggtgaaaagtgataaatttaactt 506  Q
    ||||||||||||||||||||||| |||||||||    
T  31911203 ttggaaaatggtgaaaagtgatagatttaactt 31911235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 9e-50; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 415 - 555
Target Start/End: Complemental strand, 10855562 - 10855423
Alignment:
Q  415 agaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaag 514  Q
    |||||||||||||||||||||| |||||| |||||| |||| |||||||||||||||  ||| |||||| ||||||||||||||||||||||||||||||    
T  10855562 agaatgctaaccattgtccttggggcatttgataaggggataaaaatagaaatataatattgaaaaatgatgaaaagtgataaatttaactttttaaaag 10855463  T
Q  515 tcaaaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  10855462 tcaaaatgttgttgaaacc-atgcaaatatgctacttttga 10855423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 439 - 554
Target Start/End: Complemental strand, 12191599 - 12191484
Alignment:
Q  439 gcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgc 538  Q
    ||||||||||||||||| |||||||||||||| | |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |    
T  12191599 gcattggataagtggataaaaatagaaatatagcattggtaaatggtgaaaagtgataaatttaattttttaaaagtcaaaatgttgttgaaatcaatac 12191500  T
Q  539 aaatatgctacttttg 554  Q
    ||| ||||||||||||    
T  12191499 aaacatgctacttttg 12191484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 414 - 555
Target Start/End: Complemental strand, 5578405 - 5578264
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||| |||| |||| |||||||||||||||| || |||| |||||||||||||| | ||| |||||  ||| || ||||||||||||||||||||||    
T  5578405 gagaatgataactattgcccttgaggcattggatgaggggataaaaatagaaatatagcattgaaaaataatgagaattgataaatttaactttttaaaa 5578306  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
    |||||||| |||||||||| |||||||| |||||||||||||    
T  5578305 gtcaaaatattgttgaaacaaatgcaaacatgctacttttga 5578264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 414 - 555
Target Start/End: Original strand, 26572060 - 26572196
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||     |||||||| | |||||||||||||||||  ||||||||    
T  26572060 gagaatgctaaccattgtccttggggcattggataaggggataaaaatagaaatata-----ggaaaatgataaaaagtgataaatttaatattttaaaa 26572154  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
    || ||||| ||||| ||||||||||||| |||||||||||||    
T  26572155 gttaaaatattgttaaaaccaatgcaaacatgctacttttga 26572196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 414 - 550
Target Start/End: Original strand, 16437568 - 16437696
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    |||||||||||||||||  ||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||        ||||||||||||||||||    
T  16437568 gagaatgctaaccattgctcttaaggcattggataagtggataaaaatagaaatataacattggaaaatggtga--------aaatttaactttttaaaa 16437659  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctact 550  Q
    || ||||| ||||||||||||||||||| ||||||||    
T  16437660 gtaaaaatattgttgaaaccaatgcaaacatgctact 16437696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 438 - 547
Target Start/End: Complemental strand, 6867022 - 6866913
Alignment:
Q  438 ggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatg 537  Q
    ||||||||||||| |||| |||||| ||||||| | || |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  6867022 ggcattggataaggggataaaaataaaaatatagcatttgaaaatggtgaaaagtgataaatttaaccttttaaaagtcaaaatgttgttgaaatcaatg 6866923  T
Q  538 caaatatgct 547  Q
    |||| |||||    
T  6866922 caaacatgct 6866913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 457 - 554
Target Start/End: Original strand, 7875202 - 7875299
Alignment:
Q  457 aaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||    
T  7875202 aaaatagaaatatagcattggaaaatgatgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaaaccaatgcagacatgctacttttg 7875299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 414 - 554
Target Start/End: Original strand, 7274192 - 7274332
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||| ||||||||||| ||| | ||||||| ||| | || || ||||||||||||| ||||||||||  ||||||||||||||||||| ||||||||    
T  7274192 gagaatgttaaccattgtctttgggacattggacaagggaataaatatagaaatataacattggaaaatgacgaaaagtgataaatttaacattttaaaa 7274291  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    || ||||||||||||||| |||| |||| ||| ||||||||    
T  7274292 gttaaaatgttgttgaaatcaatacaaacatgttacttttg 7274332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 414 - 522
Target Start/End: Original strand, 29692319 - 29692427
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||| ||||| ||||| |||||||||||| ||||| ||||||||||||||   ||| |||||||||||||||||||||||||||||||||| |    
T  29692319 gagaatgctaatcattgcccttggggcattggataaatggataaaaatagaaatatagtattgaaaaatggtgaaaagtgataaatttaactttttaaga 29692418  T
Q  514 gtcaaaatg 522  Q
    |||||||||    
T  29692419 gtcaaaatg 29692427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 457 - 554
Target Start/End: Original strand, 7880448 - 7880545
Alignment:
Q  457 aaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||||||||||||| | || ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||| || | ||||||||||||    
T  7880448 aaaatagaaatatagcattagaaaatgatgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaaactaatacagacatgctacttttg 7880545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 414 - 502
Target Start/End: Complemental strand, 32786346 - 32786259
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaattta 502  Q
    ||||||||||||||||| ||||| || |||||||||| |||| |||||||||||||||| |||||||||||||||||| ||||||||||    
T  32786346 gagaatgctaaccattgcccttggggtattggataag-ggataaaaatagaaatataacattggaaaatggtgaaaagagataaattta 32786259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 417 - 536
Target Start/End: Original strand, 8324085 - 8324204
Alignment:
Q  417 aatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtc 516  Q
    ||||||||||||| | |||| ||||||| |||||  ||| |||||||||| ||| | |||  |||| ||||||| |||||||||||||||||||||| |     
T  8324085 aatgctaaccattattcttggggcattgaataagaagataaaaatagaaacatagcattgagaaattgtgaaaaatgataaatttaactttttaaaaatt 8324184  T
Q  517 aaaatgttgttgaaaccaat 536  Q
    ||||||||||||||||||||    
T  8324185 aaaatgttgttgaaaccaat 8324204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 429 - 554
Target Start/End: Original strand, 31220320 - 31220445
Alignment:
Q  429 tgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttg 528  Q
    |||| ||| ||||||||||||| ||||| |||| |||||||    ||| |||||||| ||||||||| ||||||||||||||||||| |||||||| |||    
T  31220320 tgtctttggggcattggataagaggatggaaatggaaatatcgttttgaaaaatggtaaaaagtgatgaatttaactttttaaaagttaaaatgttattg 31220419  T
Q  529 aaaccaatgcaaatatgctacttttg 554  Q
    ||   |||||||| || |||||||||    
T  31220420 aataaaatgcaaacatactacttttg 31220445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 504 - 554
Target Start/End: Complemental strand, 32786110 - 32786060
Alignment:
Q  504 ctttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  32786110 ctttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttg 32786060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 478 - 555
Target Start/End: Original strand, 21186059 - 21186136
Alignment:
Q  478 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
    |||||||| ||||||||| ||||||||||||||||||| ||||| || ||||| | ||||||||  ||||||||||||    
T  21186059 aaaatggtaaaaagtgatgaatttaactttttaaaagttaaaatattattgaatctaatgcaaaattgctacttttga 21186136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 414 - 553
Target Start/End: Complemental strand, 12175685 - 12175552
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||| |||||  ||||||| ||||||     |||| |||||| |||||||   ||| |||||| | |||| ||||||||||||||||||||||    
T  12175685 gagaatgctaatcattgctcttgaggtattgga-----ggataaaaatataaatatagtattgaaaaatgataaaaactgataaatttaactttttaaaa 12175591  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctactttt 553  Q
    || |||| ||| || ||||||||||||| || ||||||||    
T  12175590 gttaaaa-gttattaaaaccaatgcaaacatactactttt 12175552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 481 - 555
Target Start/End: Original strand, 34780023 - 34780097
Alignment:
Q  481 atggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
    ||||||||||||||  ||||||||||||||||||| ||||  ||||||||  ||||| |||||| ||||||||||    
T  34780023 atggtgaaaagtgaagaatttaactttttaaaagttaaaacattgttgaattcaatgtaaatatactacttttga 34780097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 479 - 530
Target Start/End: Original strand, 27127550 - 27127601
Alignment:
Q  479 aaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 530  Q
    |||||||||||| |||| |||||||||||||||||||||| || ||||||||    
T  27127550 aaatggtgaaaaatgatgaatttaactttttaaaagtcaagatattgttgaa 27127601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 474 - 541
Target Start/End: Complemental strand, 28014706 - 28014639
Alignment:
Q  474 ttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaa 541  Q
    |||| |||||||||||| |||| | ||| ||||||||||||| ||||| |||||||| ||||||||||    
T  28014706 ttgggaaatggtgaaaaatgatgagtttgactttttaaaagttaaaatattgttgaatccaatgcaaa 28014639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 485 - 555
Target Start/End: Original strand, 6507438 - 6507508
Alignment:
Q  485 tgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
    |||||||||| |||||||||||||||||| ||||||  ||||||||  ||||| | |||| ||||||||||    
T  6507438 tgaaaagtgaaaaatttaactttttaaaaatcaaaacattgttgaattcaatgtatatatactacttttga 6507508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 473 - 526
Target Start/End: Complemental strand, 1947477 - 1947424
Alignment:
Q  473 gttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgt 526  Q
    ||||||||||||| ||||||| |||||| |||||| |||||||||||| |||||    
T  1947477 gttggaaaatggtaaaaagtgttaaattcaactttctaaaagtcaaaaagttgt 1947424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 478 - 555
Target Start/End: Original strand, 14232533 - 14232610
Alignment:
Q  478 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
    |||||||||||||||||| |||||| ||||| |||||||||||  |||| ||| | |||| ||| || ||||||||||    
T  14232533 aaaatggtgaaaagtgatgaatttagcttttcaaaagtcaaaacattgtcgaatctaatgtaaacatactacttttga 14232610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 473 - 518
Target Start/End: Complemental strand, 19646069 - 19646024
Alignment:
Q  473 gttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaa 518  Q
    |||| |||||||||||||||| | |||| |||||||||||||||||    
T  19646069 gttgaaaaatggtgaaaagtgttgaattcaactttttaaaagtcaa 19646024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 479 - 544
Target Start/End: Complemental strand, 29964367 - 29964302
Alignment:
Q  479 aaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatat 544  Q
    |||||||||||| | |  ||||||||||||||||||||||||  ||||||||  ||||| ||||||    
T  29964367 aaatggtgaaaaataaataatttaactttttaaaagtcaaaacattgttgaattcaatgtaaatat 29964302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 101; Significance: 9e-50; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 414 - 554
Target Start/End: Complemental strand, 5151620 - 5151480
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    |||| |||||||||||||| |||||||||| |||||| |||| |||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||    
T  5151620 gagagtgctaaccattgtcattgaggcatttgataaggggataaaaatagaaatataacattggaaaatgatgaaaaatgataaatttaactttttaaaa 5151521  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    ||||||||||||||||||| |||||||| ||||||||||||    
T  5151520 gtcaaaatgttgttgaaactaatgcaaacatgctacttttg 5151480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 417 - 554
Target Start/End: Original strand, 35653236 - 35653373
Alignment:
Q  417 aatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtc 516  Q
    |||||||||||||| |||||  |||||||||||| |||| |||||||||||||| | |||||||||||||||||||||||||||||||||||| ||| ||    
T  35653236 aatgctaaccattgcccttggtgcattggataaggggataaaaatagaaatatagcattggaaaatggtgaaaagtgataaatttaactttttgaaaatc 35653335  T
Q  517 aaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    ||||||||||||||||||||||||| ||| ||||||||    
T  35653336 aaaatgttgttgaaaccaatgcaaacatggtacttttg 35653373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 414 - 555
Target Start/End: Original strand, 4421942 - 4422083
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||| ||||||||| ||||  ||||||||||||| |||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||    
T  4421942 gagaatgttaaccattgcccttagggcattggataagaggataaaaatagaaatatagcattggaaaatggtgaaaagtgataaatttaactttttacaa 4422041  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
     ||||||||||||||||  ||||||||| ||| |||||||||    
T  4422042 atcaaaatgttgttgaagtcaatgcaaacatgttacttttga 4422083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 414 - 554
Target Start/End: Original strand, 4962495 - 4962634
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    |||||||||| |||||| ||||| | ||||||||||| | || |||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||    
T  4962495 gagaatgctacccattgcccttgggacattggataag-gaataaaaatagaaatataacattggaaaatgatgaaaagtgataaatttaacttttttaaa 4962593  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    ||||||||||||||||||| ||| |||| ||||||||||||    
T  4962594 gtcaaaatgttgttgaaactaatacaaacatgctacttttg 4962634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 414 - 554
Target Start/End: Complemental strand, 34546909 - 34546769
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||| ||| |||||||||||  | |||||||||| |||| |||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  34546909 gagaatgataatcattgtccttggagtattggataaggggataaaaatagaaatataacattgaaaaatggtgaaaagtgataaatttaattttttaaaa 34546810  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    || |||||||||||||||| |||||||| ||| ||||||||    
T  34546809 gttaaaatgttgttgaaactaatgcaaaaatgatacttttg 34546769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 432 - 555
Target Start/End: Original strand, 25017287 - 25017410
Alignment:
Q  432 ccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaa 531  Q
    ||||||||||||||||||| |||| ||||||||||||||   ||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||    
T  25017287 ccttgaggcattggataaggggataaaaatagaaatatagtattggaaaattgtgaaaagtgataaatttaactttttaaaagtcaaaatatcgttgaaa 25017386  T
Q  532 ccaatgcaaatatgctacttttga 555  Q
    ||||| |||| |||||||||||||    
T  25017387 ccaatacaaacatgctacttttga 25017410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 417 - 555
Target Start/End: Original strand, 3639056 - 3639193
Alignment:
Q  417 aatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtc 516  Q
    ||||||||||||||| |||||| ||||| ||||| |||| |||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||    
T  3639056 aatgctaaccattgttcttgagacattgaataaggggataaaaatagaaatataacattggaaaatggtgaagagtgataaatttaattttttaaaagtc 3639155  T
Q  517 aaaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
     |||| ||||||||||||||||||| ||  |||||||||    
T  3639156 -aaatattgttgaaaccaatgcaaacatattacttttga 3639193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 414 - 554
Target Start/End: Original strand, 16315512 - 16315650
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    |||||||||||||| || ||||  ||||| ||||||| |||| |||||||||||||| | |||||||||||||||||||||||||  ||||||||||| |    
T  16315512 gagaatgctaaccactgccctttgggcatcggataaggggataaaaatagaaatatagcattggaaaatggtgaaaagtgataaa--taactttttaata 16315609  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||||||||||||||||||||||||||| | ||||||||||    
T  16315610 gtcaaaatgttgttgaaaccaatgcaaacacgctacttttg 16315650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 414 - 555
Target Start/End: Complemental strand, 39568034 - 39567893
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||| ||||||||| ||||| ||||||||||||  |||| |||||| ||||||| | |||||||||| |||||| ||||||||||||||||||||||    
T  39568034 gagaatgataaccattgcccttggggcattggataatgggataaaaatataaatatagcattggaaaatgatgaaaaatgataaatttaactttttaaaa 39567935  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
     ||||||  ||||||||||||||||||| |||||||||||||    
T  39567934 atcaaaacattgttgaaaccaatgcaaacatgctacttttga 39567893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 414 - 554
Target Start/End: Original strand, 28143101 - 28143241
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||| ||||| | ||||| |||||  ||| |||||||||||||||| |||| |||||||||||| | ||||||||||||||||||||    
T  28143101 gagaatgctaaccattgcccttgggacattgaataaggagataaaaatagaaatataacattgggaaatggtgaaaaataataaatttaactttttaaaa 28143200  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
     |||||||||||||||||| ||| |||| ||||||||||||    
T  28143201 atcaaaatgttgttgaaactaatacaaacatgctacttttg 28143241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 414 - 554
Target Start/End: Complemental strand, 35945377 - 35945237
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||| |||||  |||| || |||||||||| | || |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||     
T  35945377 gagaatgctaatcattgctcttggggtattggataagggaataaaaatagaaatataacattggaaaatagtgaaaagtgataaatttaactttttaaat 35945278  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    || |||||||||||||||| |||||||||||| || |||||    
T  35945277 gttaaaatgttgttgaaactaatgcaaatatgatatttttg 35945237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 414 - 536
Target Start/End: Original strand, 1479114 - 1479236
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    |||||||||||||||| | |||||||||||| ||||| |||| |||||||||||||| | ||| |||||  |||||||||||||||||||||||||||||    
T  1479114 gagaatgctaaccattattcttgaggcattgaataaggggataaaaatagaaatatagcattgaaaaataatgaaaagtgataaatttaactttttaaaa 1479213  T
Q  514 gtcaaaatgttgttgaaaccaat 536  Q
    ||||||||||| |||||||||||    
T  1479214 gtcaaaatgttattgaaaccaat 1479236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 414 - 540
Target Start/End: Complemental strand, 37243977 - 37243852
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||| ||||| ||||||||||||||||||  |||| |||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  37243977 gagaatgctaatcattgcccttgaggcattggataaa-ggataaaaataaaaatataatattggaaaatggtgaaaagtgataaatttaactttttaaaa 37243879  T
Q  514 gtcaaaatgttgttgaaaccaatgcaa 540  Q
     | ||||||||||||||| ||||||||    
T  37243878 attaaaatgttgttgaaatcaatgcaa 37243852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 414 - 555
Target Start/End: Original strand, 43414042 - 43414183
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    |||||||||||  |||| ||||| | ||  ||||||| |||| |||||||||||||| | ||||||||||||||||| |||| |||||||||||||||||    
T  43414042 gagaatgctaagaattgcccttgggacaagggataaggggataaaaatagaaatatagcattggaaaatggtgaaaaatgatcaatttaactttttaaaa 43414141  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
     ||||||||||||||||||||||||||| ||| |||||||||    
T  43414142 atcaaaatgttgttgaaaccaatgcaaacatgttacttttga 43414183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 433 - 542
Target Start/End: Complemental strand, 1759929 - 1759820
Alignment:
Q  433 cttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaac 532  Q
    |||| ||||||||||||| |||| ||||||||||||||   ||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  1759929 cttggggcattggataagaggataaaaatagaaatatagtattgaaaaatggagaaaagtgataaatttaactttttaaaagtcaaaatgttgttaaaac 1759830  T
Q  533 caatgcaaat 542  Q
    ||||||||||    
T  1759829 caatgcaaat 1759820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 414 - 553
Target Start/End: Original strand, 338742 - 338881
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    |||||| |||||||||| ||||| ||||||||||||  |||| |||||| |||||| |  ||| |||||| | |||||||||||||||||||||||||||    
T  338742 gagaatcctaaccattgcccttggggcattggataaagggataaaaataaaaatatgatattgaaaaatgataaaaagtgataaatttaactttttaaaa 338841  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctactttt 553  Q
     ||||||| |||||||||| |||||||| |||||||||||    
T  338842 atcaaaatattgttgaaacaaatgcaaacatgctactttt 338881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 458 - 554
Target Start/End: Original strand, 13951258 - 13951354
Alignment:
Q  458 aaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    ||||||||||||| | ||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  13951258 aaatagaaatatagcattgaaaaatggtgaaaagtgataaatttatttttttaaaagtcaaaatgttgttgaaaccaatgcaagcatgctacttttg 13951354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 414 - 554
Target Start/End: Complemental strand, 8410273 - 8410133
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||| | ||| || ||| |||||| |||| |||||| |||||||   || ||||||||| |||| ||||||||||||||||||||||    
T  8410273 gagaatgctaaccattgcctttggggtattagataaggggataaaaataaaaatatagtattagaaaatggtaaaaaatgataaatttaactttttaaaa 8410174  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    ||||||||||| || |||||||| |||| |||||| |||||    
T  8410173 gtcaaaatgttattaaaaccaatacaaacatgctagttttg 8410133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 457 - 548
Target Start/End: Original strand, 12068195 - 12068286
Alignment:
Q  457 aaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgcta 548  Q
    ||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||| ||||||    
T  12068195 aaaatagaaatatagtattggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttattgacaccaatacaaacatgcta 12068286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 459 - 554
Target Start/End: Complemental strand, 12914261 - 12914166
Alignment:
Q  459 aatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||||||||||| | ||| |||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||| || |||||||||    
T  12914261 aatagaaatatagcattgaaaaatggtgaaaagtgataaatttaattttttaaaaatcaaaatattgttgaaaccaatgcaaacatactacttttg 12914166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 439 - 525
Target Start/End: Complemental strand, 27823365 - 27823279
Alignment:
Q  439 gcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttg 525  Q
    |||||||||||| |||| ||||||||||||||   |||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  27823365 gcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaattaaaatgttg 27823279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 414 - 550
Target Start/End: Original strand, 10017600 - 10017733
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||| ||||||||||||| ||| |||| |||||| |||| ||||||||||||||    ||| |||||||||||| |||||||  |||||||||||||    
T  10017600 gagaatgttaaccattgtcctagagacatttgataagaggataaaaatagaaatatagtactgg-aaatggtgaaaattgataaa--taactttttaaaa 10017696  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctact 550  Q
    || ||||||||||| ||||||||||||| || |||||    
T  10017697 gttaaaatgttgttaaaaccaatgcaaacatactact 10017733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 417 - 506
Target Start/End: Complemental strand, 15915960 - 15915871
Alignment:
Q  417 aatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactt 506  Q
    ||||||||||||||  |||| ||||||||||||| | || |||||||||||||| | |||||||||||||||||||||||||||||||||    
T  15915960 aatgctaaccattgcacttggggcattggataagggaataaaaatagaaatatagcattggaaaatggtgaaaagtgataaatttaactt 15915871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 433 - 541
Target Start/End: Original strand, 25568288 - 25568397
Alignment:
Q  433 cttgaggcattggataa-gtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaa 531  Q
    ||||||| ||||||||| | |||| |||||| ||||||| | ||| |||||| |||||||||||| |||||||||||||||| |||||||||| ||||||    
T  25568288 cttgaggtattggataaaggggataaaaatataaatatagcattgaaaaatgatgaaaagtgatacatttaactttttaaaaatcaaaatgttattgaaa 25568387  T
Q  532 ccaatgcaaa 541  Q
    ||||||||||    
T  25568388 ccaatgcaaa 25568397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 415 - 547
Target Start/End: Complemental strand, 40099461 - 40099333
Alignment:
Q  415 agaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaa-tggtgaaaagtgataaatttaactttttaaaa 513  Q
    |||||| ||||||||||||||| ||||||||||||| |||  |||||| ||||||| | ||| |||| ||||||||||||||||||||||| ||||||||    
T  40099461 agaatgttaaccattgtccttgtggcattggataagggga--aaaataaaaatatagcattgaaaaaatggtgaaaagtgataaatttaaccttttaaaa 40099364  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgct 547  Q
     |  |||   |||||||| |||||||||||||||    
T  40099363 attgaaa---tgttgaaatcaatgcaaatatgct 40099333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 478 - 541
Target Start/End: Complemental strand, 39335540 - 39335477
Alignment:
Q  478 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaa 541  Q
    ||||| || ||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||    
T  39335540 aaaatagtaaaaagtgatgaatttaactttttaaaagtcaaaatgttgttgaatccaatacaaa 39335477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 478 - 554
Target Start/End: Complemental strand, 10406854 - 10406779
Alignment:
Q  478 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    ||||||| |||||||||||||||||| ||||| ||| ||||||| |||||||| |||||||||| ||| ||||||||    
T  10406854 aaaatggagaaaagtgataaatttaa-ttttttaaattcaaaatattgttgaatccaatgcaaaaatgttacttttg 10406779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 474 - 530
Target Start/End: Original strand, 39069314 - 39069370
Alignment:
Q  474 ttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 530  Q
    ||||||||| |||||||||||| |||||||| |||||||||||||||| ||||||||    
T  39069314 ttggaaaattgtgaaaagtgatgaatttaacattttaaaagtcaaaatattgttgaa 39069370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 465 - 555
Target Start/End: Complemental strand, 39693090 - 39693000
Alignment:
Q  465 aatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
    |||||| | ||| ||| |||| |||| ||||||||||| |||||||||||| ||||| ||||||||| |||| |||| ||| |||||||||    
T  39693090 aatatagcattgaaaagtggtaaaaaatgataaatttatctttttaaaagttaaaatattgttgaaatcaatacaaacatgttacttttga 39693000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 454 - 542
Target Start/End: Original strand, 6823770 - 6823859
Alignment:
Q  454 atgaaaatagaaatataacgttggaaaatggtgaaaagtgataaattt-aactttttaaaagtcaaaatgttgttgaaaccaatgcaaat 542  Q
    ||||||||||||||||    | |||||| |||| ||||| |||||||| |||||||||||||| ||||| |||||||| |||||||||||    
T  6823770 atgaaaatagaaatattgtatcggaaaacggtggaaagtaataaattttaactttttaaaagttaaaatattgttgaatccaatgcaaat 6823859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 499 - 541
Target Start/End: Original strand, 16899635 - 16899677
Alignment:
Q  499 tttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaa 541  Q
    |||||||||||||||||||||||||||||||| ||||| ||||    
T  16899635 tttaactttttaaaagtcaaaatgttgttgaatccaatacaaa 16899677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 452 - 554
Target Start/End: Original strand, 39042051 - 39042153
Alignment:
Q  452 ggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctactt 551  Q
    |||| |||||| ||||||||| ||| |||||  |||||| || | ||||||| ||||||||||| |||||||||||||   ||||| ||| |||||| ||    
T  39042051 ggataaaaataaaaatataacattgtaaaataatgaaaaatggttaatttaattttttaaaagttaaaatgttgttgatgtcaatgtaaacatgctattt 39042150  T
Q  552 ttg 554  Q
    |||    
T  39042151 ttg 39042153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 457 - 530
Target Start/End: Original strand, 3015071 - 3015144
Alignment:
Q  457 aaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 530  Q
    |||||||||||||   ||| |||||| ||| ||| |||| ||||||||||||||||||| ||||| ||||||||    
T  3015071 aaaatagaaatattgtgttagaaaatagtgtaaaatgattaatttaactttttaaaagttaaaatattgttgaa 3015144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 474 - 530
Target Start/End: Complemental strand, 678521 - 678465
Alignment:
Q  474 ttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 530  Q
    ||||||||||||||||||| || |||||||| |||||||||| ||||  ||||||||    
T  678521 ttggaaaatggtgaaaagtaatgaatttaaccttttaaaagttaaaaaattgttgaa 678465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 478 - 530
Target Start/End: Original strand, 10163668 - 10163720
Alignment:
Q  478 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 530  Q
    |||| ||||||||||||  ||||||||||||||||||||||||| ||| ||||    
T  10163668 aaaagggtgaaaagtgaagaatttaactttttaaaagtcaaaatattgctgaa 10163720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 479 - 515
Target Start/End: Complemental strand, 24288553 - 24288517
Alignment:
Q  479 aaatggtgaaaagtgataaatttaactttttaaaagt 515  Q
    |||||||||||||||||| ||||||||||||||||||    
T  24288553 aaatggtgaaaagtgatagatttaactttttaaaagt 24288517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 479 - 515
Target Start/End: Original strand, 24373668 - 24373704
Alignment:
Q  479 aaatggtgaaaagtgataaatttaactttttaaaagt 515  Q
    |||||||||||||||||| ||||||||||||||||||    
T  24373668 aaatggtgaaaagtgatagatttaactttttaaaagt 24373704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 434 - 525
Target Start/End: Complemental strand, 27535206 - 27535114
Alignment:
Q  434 ttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgat-aaatttaactttttaaaagtcaaaatgttg 525  Q
    ||||||||||| ||||  |||| |||||| ||||||    ||| |||||||||||||||||| || ||||| ||||||||||| |||||||||    
T  27535206 ttgaggcattgaataaaaggataaaaatataaatattgtattgaaaaatggtgaaaagtgatgaattttaagtttttaaaagttaaaatgttg 27535114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 474 - 554
Target Start/End: Complemental strand, 39167666 - 39167587
Alignment:
Q  474 ttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    ||||||||||||||||||| | |||||||||||||||||| ||||||  ||||| ||  ||||| ||||||  ||||||||    
T  39167666 ttggaaaatggtgaaaagtaa-aaatttaactttttaaaaatcaaaacattgttaaattcaatgtaaatatattacttttg 39167587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 478 - 513
Target Start/End: Complemental strand, 5058812 - 5058777
Alignment:
Q  478 aaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||| ||||||||||||||||||||||||||||||    
T  5058812 aaaattgtgaaaagtgataaatttaactttttaaaa 5058777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 477 - 520
Target Start/End: Original strand, 12349585 - 12349628
Alignment:
Q  477 gaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaa 520  Q
    |||||||||||||||||||| |||| ||||||||||||| ||||    
T  12349585 gaaaatggtgaaaagtgatagatttgactttttaaaagttaaaa 12349628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 474 - 541
Target Start/End: Original strand, 28599692 - 28599759
Alignment:
Q  474 ttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaa 541  Q
    ||||||||| ||||||| |||||||||| ||||||||||||| ||||  || |||||  |||||||||    
T  28599692 ttggaaaatagtgaaaaatgataaatttgactttttaaaagttaaaaatttattgaattcaatgcaaa 28599759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 504 - 554
Target Start/End: Complemental strand, 4838322 - 4838272
Alignment:
Q  504 ctttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||||||||||||||||| |||||||||| |||||||| ||| || |||||    
T  4838322 ctttttaaaagtcaaaatattgttgaaactaatgcaaacatgttatttttg 4838272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 457 - 530
Target Start/End: Original strand, 38610313 - 38610386
Alignment:
Q  457 aaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 530  Q
    |||||||||| ||  | ||| |||||| | ||||||||  ||||||||||||||||||||||||  ||||||||    
T  38610313 aaaatagaaacattgcattgaaaaatgataaaaagtgaagaatttaactttttaaaagtcaaaacattgttgaa 38610386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 457 - 541
Target Start/End: Complemental strand, 19894906 - 19894822
Alignment:
Q  457 aaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaa 541  Q
    |||||||||||||  | ||  |||||||| |||  |||| ||||||||||||||||||| ||||| ||||| || ||||| ||||    
T  19894906 aaaatagaaatattgcattaaaaaatggttaaatatgatgaatttaactttttaaaagttaaaatattgttaaatccaattcaaa 19894822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 20184570 - 20184642
Alignment:
Q  458 aaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 530  Q
    ||||||||||||  | |||  ||| ||||||||||||| ||||| ||||||||||||| ||||  ||||||||    
T  20184570 aaatagaaatattgcattgagaaacggtgaaaagtgatgaatttcactttttaaaagttaaaacattgttgaa 20184642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 81; Significance: 8e-38; HSPs: 3)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 414 - 554
Target Start/End: Original strand, 16750 - 16889
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||| || |  ||||||||||||| |||| |||||||||||||| | ||| ||||| ||||||| |||||||| |||||||||||||    
T  16750 gagaatgctaaccattgcccatagggcattggataaggggataaaaatagaaatatagcattg-aaaatagtgaaaaatgataaatgtaactttttaaaa 16848  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||||||| ||||||||||||||||||| ||||||||||||    
T  16849 gtcaaaatattgttgaaaccaatgcaaacatgctacttttg 16889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 414 - 554
Target Start/End: Original strand, 26918 - 27057
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||| || |  ||||||||||||| |||| |||||||||||||| | ||| ||||| ||||||| |||||||| |||||||||||||    
T  26918 gagaatgctaaccattgcccatagggcattggataaggggataaaaatagaaatatagcattg-aaaatagtgaaaaatgataaatgtaactttttaaaa 27016  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||||||| ||||||||||||||||||| ||||||||||||    
T  27017 gtcaaaatattgttgaaaccaatgcaaacatgctacttttg 27057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #3
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 414 - 554
Target Start/End: Original strand, 37084 - 37223
Alignment:
Q  414 gagaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaactttttaaaa 513  Q
    ||||||||||||||||| || |  ||||||||||||| |||| |||||||||||||| | ||| ||||| ||||||| |||||||| |||||||||||||    
T  37084 gagaatgctaaccattgcccatagggcattggataaggggataaaaatagaaatatagcattg-aaaatagtgaaaaatgataaatgtaactttttaaaa 37182  T
Q  514 gtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    |||||||| ||||||||||||||||||| ||||||||||||    
T  37183 gtcaaaatattgttgaaaccaatgcaaacatgctacttttg 37223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 422 - 553
Target Start/End: Original strand, 392114 - 392249
Alignment:
Q  422 taaccattgtccttgaggcattggataagtggatgaaaatagaaatataa----cgttggaaaatggtgaaaagtgataaatttaactttttaaaagtca 517  Q
    ||||||||| |||||||| ||| |||||  |||| ||| ||||||||||     | ||| |||||||| |||||||||||||||||||||||||||||||    
T  392114 taaccattgcccttgaggaattagataaagggataaaattagaaatatatatagcattgaaaaatggtaaaaagtgataaatttaactttttaaaagtca 392213  T
Q  518 aaatgttgttgaaaccaatgcaaatatgctactttt 553  Q
    |||||||||||||||| ||||||| |||||||||||    
T  392214 aaatgttgttgaaaccgatgcaaacatgctactttt 392249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 495 - 555
Target Start/End: Original strand, 4705 - 4765
Alignment:
Q  495 taaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttga 555  Q
    |||||||||||||||||||||||| ||||||||||||  |||||||| |||||||||||||    
T  4705 taaatttaactttttaaaagtcaatatgttgttgaaattaatgcaaacatgctacttttga 4765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 415 - 503
Target Start/End: Original strand, 4249 - 4337
Alignment:
Q  415 agaatgctaaccattgtccttgaggcattggataagtggatgaaaatagaaatataacgttggaaaatggtgaaaagtgataaatttaa 503  Q
    |||||||||| |||||   ||| | |||||||||   |||| |||||| ||||||| | ||||||||| ||||||||||||||||||||    
T  4249 agaatgctaatcattgcttttgggacattggatagagggataaaaataaaaatatagcattggaaaattgtgaaaagtgataaatttaa 4337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 485 - 540
Target Start/End: Original strand, 37428 - 37483
Alignment:
Q  485 tgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaa 540  Q
    |||||| |||| |||||||||||| ||||||||||||||| ||||| |||||||||    
T  37428 tgaaaaatgatgaatttaacttttcaaaagtcaaaatgttattgaatccaatgcaa 37483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 474 - 554
Target Start/End: Complemental strand, 39658 - 39580
Alignment:
Q  474 ttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttg 554  Q
    ||||||||| ||||||| |||  |||||||||||||||||||||| |  ||||||||  ||||| |||||| |||||||||    
T  39658 ttggaaaatagtgaaaactgaagaatttaactttttaaaagtcaaca--ttgttgaattcaatgtaaatatactacttttg 39580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 473 - 520
Target Start/End: Original strand, 9045 - 9092
Alignment:
Q  473 gttggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaa 520  Q
    |||| |||||||||||||||| | |||| |||||||||||||||||||    
T  9045 gttgaaaaatggtgaaaagtgttgaattcaactttttaaaagtcaaaa 9092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University