View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7406_low_40 (Length: 202)
Name: NF7406_low_40
Description: NF7406
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7406_low_40 |
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Alignment Details
Target: chr4 (Bit Score: 121; Significance: 3e-62; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 63 - 183
Target Start/End: Complemental strand, 53474847 - 53474727
Alignment:
| Q |
63 |
aaactgaataagttagacgacataatctgctcccacccaaacacgataaagaccttatacaacaacacttgaagcaataactcacatgttactaagagat |
162 |
Q |
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| T |
53474847 |
aaactgaataagttagacgacataatctgctcccacccaaacacgataaagaccttatacaacaacacttgaagcaataactcacatgttactaagagat |
53474748 |
T |
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| Q |
163 |
ggctacaaaggaagcaatttg |
183 |
Q |
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| T |
53474747 |
ggctacaaaggaagcaatttg |
53474727 |
T |
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