View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7408_low_10 (Length: 328)
Name: NF7408_low_10
Description: NF7408
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7408_low_10 |
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Alignment Details
Target: chr5 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 20 - 315
Target Start/End: Complemental strand, 32130140 - 32129845
Alignment:
| Q |
20 |
aatgtcttactagaagggtgccaaaacatttgttatggggtagagaagtgaagttgcaatgtgcaattgttgaatgaatagaagaatcacataaggcaat |
119 |
Q |
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| T |
32130140 |
aatgtcttactagaagggtgccaaaacatttgttatggggcagagaagtgaagttgcaatgtgcaattgttgaatgaatagaagaatcacataaggcaat |
32130041 |
T |
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| Q |
120 |
gaaggagtgctaaaatgatgagacatagctgtaattttgaatattaaagttaggaacatattcatggattagccatcatgtgacatatagtcagtcacat |
219 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32130040 |
gaaggagtgctaaaatgatgagacatagctgtaattttgcatattaaagttaggaacatattcatggattagccatcatgtgacatatagtcagtcacat |
32129941 |
T |
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| Q |
220 |
ttcacatggttataattgcaattcacttgactgtgtgatgctaaagggtggctagaaaaccccactggnnnnnnnnaccctaaattttttacctct |
315 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
32129940 |
ttcacatggttataattgcaattcacttgactgtgtgatgctaaagggtggctagaaaaccccactggttttttttaccctaaattttttacctct |
32129845 |
T |
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