View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7410_high_8 (Length: 239)
Name: NF7410_high_8
Description: NF7410
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7410_high_8 |
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Alignment Details
Target: chr1 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 39269807 - 39270028
Alignment:
| Q |
1 |
tcaccatcattctttctgtcaatttaatatagtgcaagtttcccttcaacatccaaaagcttacccagtttctctgaaaccgcggccaaagttgtctcgc |
100 |
Q |
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||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39269807 |
tcaccattattctttctgtcaatttaatatagcgcaagtttcccttcaacatccaaaagcttacccagtttctctgaaaccgcggccaaagttgtctcgc |
39269906 |
T |
|
| Q |
101 |
tcttgcagaatgcaaacctgatgtatctcttctggtagttacaacttgcactagaagtttcatttgttgataggtttgtatgaaaaaatccctgtcctgg |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39269907 |
tcttgcagaatgcaaacctgatgtatctcttctggtagttacaacttgcactagaagtttcatttgttgataggtttgtatgaaaaaatccctgtcctgg |
39270006 |
T |
|
| Q |
201 |
aacagccaccacccccgcttct |
222 |
Q |
| |
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|||||||||||||||||||||| |
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| T |
39270007 |
aacagccaccacccccgcttct |
39270028 |
T |
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