View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7410_low_11 (Length: 256)
Name: NF7410_low_11
Description: NF7410
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7410_low_11 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 13 - 256
Target Start/End: Original strand, 5047614 - 5047858
Alignment:
| Q |
13 |
aatattatgcaagggtgagagttcaaaccatgtacttccttttatctgaatttaaaatgtgtgagctataactactataccacttaaaagaagaaaa-ga |
111 |
Q |
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| T |
5047614 |
aatattatgtaagggtgagagttcaaaccatgtacttccttttatctgaatttaaaatgtgtgagctataaccactgtaccacttaaaagaaaaaaaaga |
5047713 |
T |
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| Q |
112 |
aactacacaaaaatggagtgaaaatattgggtaaagatcagataggaaaatggaccaatgaccatatccttagtgacaaaaaattgaatttacattaacc |
211 |
Q |
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| T |
5047714 |
aactacacaaaaatggagtgaaaatatcgggtaaagatcagataggaaaatggaccaatgaccatatccttagtgacaaaaaattgaattttaattaacc |
5047813 |
T |
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| Q |
212 |
atgactagtcgtagtcttgcaaggaattccccacttttaaatgac |
256 |
Q |
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| T |
5047814 |
atgactagtcgtagtcttgcaaggaattccccacttttaaatgac |
5047858 |
T |
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