View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7410_low_3 (Length: 463)
Name: NF7410_low_3
Description: NF7410
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7410_low_3 |
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Alignment Details
Target: chr8 (Bit Score: 314; Significance: 1e-177; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 9 - 445
Target Start/End: Original strand, 29023804 - 29024228
Alignment:
| Q |
9 |
gaaatgaaccaggatgtgttgttggtgaacatagacaatttgttttagtcatactaggttgtctcataagtccaccttgtcccatatttgaacctccttg |
108 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
29023804 |
gaaatgaaccaggatgtgttgttggtgaacatagacaatttgttttggtcatactaggttgtctcataagtccaccttgtcccatatttgaacccccttg |
29023903 |
T |
|
| Q |
109 |
tacctctacccctatagtacttgacataacttcacttcttgattgaatctccactttcatttccttgcttgtaatttggtcattttccatgcttnnnnnn |
208 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
29023904 |
tacctctacccctatagtacttgacataacttcactccttgattgaatctccactttcatttccttgcttgtaatttgttcattttccatgcttaaaaaa |
29024003 |
T |
|
| Q |
209 |
nntggacactattttttggaaattgaagtttaatttgtagccaaatttataagtttaagaactaatgtaatgtaatgaaactatatataattgaggacct |
308 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
29024004 |
aatggacactattttttggaaattgaagttta----gtagccaaatttataagtttaagaac-----taatgtaatgaaactatatataattgaggacct |
29024094 |
T |
|
| Q |
309 |
tacctttagaaagtgtctagaagagccaatgggttaagaaagtagatatgcatgtaagatacaaacaatgtgaattaaaatctagatgaatatataacac |
408 |
Q |
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|||||| |||||||||||||||||| || | || | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
29024095 |
taccttaagaaagtgtctagaagagaca---gaaaaaaagagtagatatgcatgtaagatacaaacaatgtgaattaaaatctagatcaatatataacac |
29024191 |
T |
|
| Q |
409 |
aaaagtttgctttatttctatgtcacggggtttgata |
445 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
29024192 |
aaaagtttgctttatttctatgtcacggggtttgata |
29024228 |
T |
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