View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7411_high_11 (Length: 300)
Name: NF7411_high_11
Description: NF7411
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7411_high_11 |
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Alignment Details
Target: chr4 (Bit Score: 258; Significance: 1e-144; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 258; E-Value: 1e-144
Query Start/End: Original strand, 15 - 296
Target Start/End: Original strand, 24627867 - 24628147
Alignment:
| Q |
15 |
atgctatacgaatttctaaccaacatccgataaaattcaaccctaaccaaactaacaatagcaatcaatttgaacaaaacaccagtccgtaacactacaa |
114 |
Q |
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| T |
24627867 |
atgccatacgaatttctaaccaacatccgataaaattcaaccctaaccaaactaacaatagcaatcaatttgaacaaaacaccagtccgtaacactacaa |
24627966 |
T |
|
| Q |
115 |
caacggtcccttttatggtgctgagataaatatttcatccaattttcaccaacatcaaattcatcattcataacatagtttctatttttcttacttcaac |
214 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
24627967 |
caacggtcccttttatggtgctgagataaatatttcatccaattttcaccaacatcaaattcatcattcataacatagtttct-tttttcttacttcaac |
24628065 |
T |
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| Q |
215 |
ttaatttacacgtgcagttaacttaatgacaaaccttaacctaactccatcatactcaaatcagccccctttcttctcactc |
296 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |
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| T |
24628066 |
ttaatttacacatgcagttaacttaatgacaaaccttaacctaactccatcaaactcaaatcagccccctttcttctaactc |
24628147 |
T |
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