View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7411_high_13 (Length: 267)
Name: NF7411_high_13
Description: NF7411
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7411_high_13 |
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Alignment Details
Target: chr8 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 2016981 - 2017226
Alignment:
| Q |
1 |
aacaaataagaagagaaactgaatgtgaaaactatgatgnnnnnnngatcaaaaacattgttaaaagttccttatgagtttacccaagttagtgcgagtt |
100 |
Q |
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| T |
2016981 |
aacaaataagaagagaaaccgaatgtgaaaactatgatgaaaaaaagatcaaaaacattgttaaaagttccttatgagtttacccaagttagtgcgagtt |
2017080 |
T |
|
| Q |
101 |
catctaagtttacaacagagtcaacttgaaactgtatgattcatcaagttaactcagggattttaacaaccttgcttgaaagatgaagaactcaagtatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2017081 |
catctaagtttacaacagagtcaacttgaaactgtacgattcatcaagttaactcagggattttaacaaccttgcttgaaagatgaagaactcaagtatt |
2017180 |
T |
|
| Q |
201 |
ctcattaagatggttagtcatctggattatgataaaaccttcaagg |
246 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2017181 |
ctcattaagatggttagtcatctggattatgataaaaccttcaagg |
2017226 |
T |
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