View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7411_low_5 (Length: 386)
Name: NF7411_low_5
Description: NF7411
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7411_low_5 |
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Alignment Details
Target: chr8 (Bit Score: 356; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 356; E-Value: 0
Query Start/End: Original strand, 1 - 368
Target Start/End: Original strand, 26275998 - 26276364
Alignment:
| Q |
1 |
ggatttttcttcatgttgatgacagaaacagaaaattgacacaatcttacagccccttttcgtaagattctcatcagtcggcatcttgttgttagctaat |
100 |
Q |
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| T |
26275998 |
ggatttttcttcatgttgatgacagaaacagaaaattgacacaatcttacagccccttttcgtaagattctcatcagtcggcatcttgttgttagctaat |
26276097 |
T |
|
| Q |
101 |
ctccagaaaatgaaagacctagagggagggacgaaattgttccaaactaacttacaccacctcaccttaggaccaaagatgcgcaaggtgttataggcgc |
200 |
Q |
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| T |
26276098 |
ctccagaaaatgaaagacctagagg-agggacgaaattgttccaaactaacttacaccacctcaccttaggaccaaagatgcgcaaggtgttataggcgc |
26276196 |
T |
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| Q |
201 |
aattttgctagtaagttttccatcaacggaggccctccaattcagcctatcatgggaatcatcaatagagagggtaaccgtgagaatttgctttgctaac |
300 |
Q |
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| T |
26276197 |
aattttgctagtaagttttccatcaacagaggccctccaattcagcctatcatgggaatcatcaatagagagggtaaccgtgagaatttgctttgctaac |
26276296 |
T |
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| Q |
301 |
tctttagacttttgtatcagatacatggggatattccaattaccatccagaatgtaatctgctacctt |
368 |
Q |
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| T |
26276297 |
tctttagacttttgtatcagatacatggggatattccaattaccatccagaatgtaatctgctacctt |
26276364 |
T |
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