View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7413_high_14 (Length: 360)
Name: NF7413_high_14
Description: NF7413
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7413_high_14 |
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Alignment Details
Target: chr8 (Bit Score: 302; Significance: 1e-170; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 18 - 327
Target Start/End: Complemental strand, 7609114 - 7608805
Alignment:
| Q |
18 |
ataaataggcctccccattgaaagctataatgttaaatctatcttgcgggtttaattgagagagtgatcctacgagtgcattctttacattttcaagagg |
117 |
Q |
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| T |
7609114 |
ataaataggcctccccattgaaagctataatgttaaatctatcttgcgggtttaattgagagagtgatcctacgagtgcattctttacattttcaagagg |
7609015 |
T |
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| Q |
118 |
acttcccttcatgcttgcacttatatctactacgaacaccacatcctttttaaaaacctatcaatgtataaacgttccattaaatttgcttaagtttgaa |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7609014 |
acttcccttcatgcttgcacttatatctactacgaacaccacatcctttttaaaaacctatcaatgtataaacgttccattaaatttgcttaagtttgaa |
7608915 |
T |
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| Q |
218 |
acaaacatggacctgtgcaaactacaatgtaaccatttgatgttacacacacactatcttacctagcttttctgtctgaacaatcataaaaaaattatat |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |
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| T |
7608914 |
acaaacatggacctgtgcaaactacaatgtaaccatttgatgttacacacacactatctttcctagcttttctgtcttaacaatcataaaaaaattatat |
7608815 |
T |
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| Q |
318 |
ttttcaaaag |
327 |
Q |
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|||||||||| |
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| T |
7608814 |
ttttcaaaag |
7608805 |
T |
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