View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7413_low_17 (Length: 330)

Name: NF7413_low_17
Description: NF7413
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7413_low_17
NF7413_low_17
[»] chr1 (49 HSPs)
chr1 (78-311)||(35479863-35480096)
chr1 (82-311)||(42134485-42134715)
chr1 (85-311)||(46638701-46638928)
chr1 (82-298)||(45380875-45381092)
chr1 (85-311)||(36895404-36895631)
chr1 (84-323)||(18183837-18184077)
chr1 (79-311)||(44157436-44157668)
chr1 (80-311)||(33685138-33685369)
chr1 (87-245)||(6575261-6575418)
chr1 (85-277)||(31801670-31801863)
chr1 (79-311)||(27940611-27940844)
chr1 (79-311)||(47269344-47269577)
chr1 (223-311)||(5784867-5784955)
chr1 (223-311)||(11152548-11152636)
chr1 (223-311)||(31803700-31803788)
chr1 (223-306)||(27952500-27952583)
chr1 (223-304)||(18180510-18180591)
chr1 (223-311)||(33679262-33679350)
chr1 (223-311)||(45379088-45379176)
chr1 (225-311)||(35478090-35478176)
chr1 (191-304)||(4855967-4856080)
chr1 (97-284)||(15104471-15104659)
chr1 (191-304)||(34778139-34778252)
chr1 (223-311)||(42136244-42136332)
chr1 (223-311)||(44159294-44159382)
chr1 (209-311)||(5783367-5783469)
chr1 (225-311)||(6577107-6577193)
chr1 (179-304)||(2869589-2869714)
chr1 (223-311)||(46636768-46636856)
chr1 (223-311)||(47264127-47264215)
chr1 (191-296)||(31238496-31238601)
chr1 (97-304)||(6818584-6818792)
chr1 (246-306)||(36894830-36894890)
chr1 (225-304)||(25276752-25276831)
chr1 (225-304)||(37345962-37346041)
chr1 (191-296)||(9121669-9121774)
chr1 (191-304)||(25278369-25278482)
chr1 (97-241)||(43868687-43868832)
chr1 (191-304)||(46583557-46583670)
chr1 (105-304)||(27087293-27087492)
chr1 (225-304)||(26223597-26223676)
chr1 (225-304)||(34776579-34776658)
chr1 (225-296)||(46582028-46582099)
chr1 (225-299)||(33599233-33599307)
chr1 (227-304)||(8167952-8168029)
chr1 (191-304)||(33602645-33602758)
chr1 (191-304)||(37344352-37344465)
chr1 (179-264)||(51896141-51896226)
chr1 (212-304)||(25278975-25279067)
[»] chr8 (58 HSPs)
chr8 (78-311)||(32822364-32822597)
chr8 (82-311)||(42897665-42897895)
chr8 (79-311)||(1320620-1320853)
chr8 (79-311)||(462260-462491)
chr8 (85-278)||(33750278-33750472)
chr8 (82-311)||(37525914-37526144)
chr8 (84-309)||(33160041-33160267)
chr8 (79-311)||(31201031-31201264)
chr8 (79-311)||(8654503-8654735)
chr8 (100-311)||(38882706-38882918)
chr8 (91-311)||(31821421-31821633)
chr8 (209-311)||(25707287-25707389)
chr8 (209-311)||(25373608-25373710)
chr8 (223-311)||(40019159-40019247)
chr8 (223-306)||(461184-461267)
chr8 (139-311)||(9184386-9184559)
chr8 (223-306)||(31823476-31823559)
chr8 (97-304)||(8609714-8609921)
chr8 (223-311)||(33368762-33368850)
chr8 (223-311)||(33748335-33748423)
chr8 (223-306)||(42894784-42894867)
chr8 (132-304)||(13282488-13282660)
chr8 (223-300)||(37524872-37524949)
chr8 (223-311)||(31199488-31199576)
chr8 (223-306)||(24526904-24526987)
chr8 (241-311)||(38881431-38881501)
chr8 (191-304)||(13108357-13108470)
chr8 (223-291)||(32824271-32824339)
chr8 (97-304)||(38547238-38547445)
chr8 (223-314)||(33158656-33158747)
chr8 (191-304)||(27691164-27691277)
chr8 (223-308)||(28433749-28433834)
chr8 (225-304)||(38548831-38548910)
chr8 (225-299)||(13106819-13106893)
chr8 (191-304)||(26242335-26242448)
chr8 (224-311)||(9186646-9186733)
chr8 (231-306)||(10267846-10267921)
chr8 (97-271)||(41825570-41825745)
chr8 (225-304)||(42943426-42943505)
chr8 (223-264)||(1322314-1322355)
chr8 (194-271)||(9673189-9673266)
chr8 (223-302)||(8655987-8656064)
chr8 (223-291)||(9876562-9876630)
chr8 (225-304)||(601704-601783)
chr8 (225-296)||(15308261-15308332)
chr8 (225-296)||(15488630-15488701)
chr8 (225-304)||(27692837-27692916)
chr8 (225-304)||(29239187-29239266)
chr8 (225-304)||(33762713-33762792)
chr8 (197-311)||(5075371-5075485)
chr8 (221-311)||(11031432-11031522)
chr8 (223-305)||(23811565-23811647)
chr8 (209-311)||(40020654-40020756)
chr8 (191-297)||(41042605-41042711)
chr8 (191-304)||(7745133-7745246)
chr8 (243-304)||(34681084-34681145)
chr8 (191-304)||(42941784-42941897)
chr8 (225-305)||(25705308-25705388)
[»] chr4 (51 HSPs)
chr4 (79-311)||(44558381-44558614)
chr4 (87-304)||(27624816-27625034)
chr4 (83-311)||(35996066-35996295)
chr4 (82-311)||(51041822-51042051)
chr4 (79-311)||(44794648-44794881)
chr4 (79-311)||(47941814-47942047)
chr4 (96-311)||(10372611-10372827)
chr4 (79-311)||(2350392-2350628)
chr4 (79-311)||(10762584-10762817)
chr4 (91-311)||(2827410-2827628)
chr4 (97-311)||(4519379-4519594)
chr4 (223-311)||(39923007-39923095)
chr4 (223-311)||(42879278-42879366)
chr4 (223-311)||(43778392-43778480)
chr4 (223-311)||(44992811-44992899)
chr4 (223-311)||(4520451-4520539)
chr4 (223-311)||(39085152-39085240)
chr4 (223-306)||(44792942-44793025)
chr4 (223-311)||(2828411-2828499)
chr4 (223-292)||(51040757-51040826)
chr4 (223-311)||(10371060-10371148)
chr4 (223-311)||(35997767-35997855)
chr4 (191-304)||(41761747-41761860)
chr4 (223-311)||(5486052-5486140)
chr4 (223-311)||(47942746-47942834)
chr4 (224-311)||(230439-230526)
chr4 (223-305)||(44556629-44556711)
chr4 (97-304)||(51011936-51012143)
chr4 (209-311)||(5484543-5484645)
chr4 (209-311)||(39083642-39083744)
chr4 (191-304)||(43519434-43519547)
chr4 (223-311)||(10767950-10768038)
chr4 (225-304)||(4173740-4173819)
chr4 (191-278)||(35404446-35404533)
chr4 (225-304)||(43507177-43507256)
chr4 (225-304)||(43508653-43508732)
chr4 (180-274)||(13450970-13451064)
chr4 (209-311)||(39189385-39189487)
chr4 (209-311)||(39921497-39921599)
chr4 (223-264)||(39190819-39190860)
chr4 (191-304)||(49523134-49523247)
chr4 (223-258)||(27626728-27626763)
chr4 (225-304)||(39345574-39345653)
chr4 (191-278)||(41781575-41781662)
chr4 (209-311)||(42880774-42880876)
chr4 (209-311)||(43779886-43779988)
chr4 (191-252)||(48646748-48646809)
chr4 (228-304)||(320903-320979)
chr4 (255-311)||(6999332-6999388)
chr4 (223-311)||(25995112-25995200)
chr4 (209-309)||(32652104-32652204)
[»] chr7 (51 HSPs)
chr7 (78-311)||(46812469-46812703)
chr7 (85-311)||(46996596-46996823)
chr7 (82-311)||(47341573-47341807)
chr7 (97-311)||(23953808-23954023)
chr7 (85-311)||(33038691-33038918)
chr7 (79-311)||(8423169-8423402)
chr7 (85-311)||(40784349-40784576)
chr7 (79-311)||(35344178-35344411)
chr7 (97-311)||(2167482-2167697)
chr7 (97-311)||(27955373-27955588)
chr7 (170-311)||(38613460-38613602)
chr7 (97-309)||(2492332-2492544)
chr7 (163-311)||(38614884-38615032)
chr7 (223-311)||(30108568-30108656)
chr7 (223-311)||(45465184-45465272)
chr7 (223-311)||(46810708-46810796)
chr7 (223-306)||(36762680-36762763)
chr7 (223-311)||(3690153-3690241)
chr7 (223-311)||(4321041-4321129)
chr7 (223-311)||(8421419-8421507)
chr7 (223-311)||(35342428-35342516)
chr7 (223-311)||(40785548-40785636)
chr7 (223-311)||(46994663-46994751)
chr7 (223-306)||(33037701-33037785)
chr7 (223-311)||(38614792-38614880)
chr7 (225-304)||(33775418-33775497)
chr7 (223-311)||(23955285-23955373)
chr7 (223-311)||(2168834-2168922)
chr7 (223-311)||(36756883-36756971)
chr7 (223-311)||(36766407-36766495)
chr7 (223-306)||(47339784-47339867)
chr7 (191-275)||(34776916-34777000)
chr7 (209-311)||(45463673-45463775)
chr7 (191-304)||(6602345-6602458)
chr7 (191-304)||(27666066-27666179)
chr7 (191-304)||(39859230-39859343)
chr7 (209-309)||(4322591-4322691)
chr7 (208-304)||(29996532-29996628)
chr7 (209-304)||(56340-56435)
chr7 (225-304)||(35403619-35403698)
chr7 (191-304)||(24228410-24228523)
chr7 (209-309)||(34691000-34691100)
chr7 (225-304)||(13169683-13169762)
chr7 (225-304)||(35401979-35402058)
chr7 (114-296)||(37796104-37796287)
chr7 (191-296)||(20478060-20478165)
chr7 (266-311)||(34784070-34784115)
chr7 (191-296)||(38474144-38474249)
chr7 (191-278)||(13168156-13168246)
chr7 (93-216)||(31913567-31913691)
chr7 (97-168)||(38613610-38613681)
[»] chr2 (36 HSPs)
chr2 (82-311)||(37417276-37417506)
chr2 (81-311)||(29909550-29909781)
chr2 (79-311)||(15432331-15432564)
chr2 (81-311)||(25619663-25619894)
chr2 (85-311)||(39291-39518)
chr2 (79-311)||(15372502-15372735)
chr2 (85-311)||(92241-92467)
chr2 (79-311)||(41706542-41706775)
chr2 (111-315)||(42879355-42879559)
chr2 (79-311)||(42001613-42001845)
chr2 (153-310)||(39560-39718)
chr2 (223-311)||(28248175-28248263)
chr2 (225-311)||(41144-41230)
chr2 (223-311)||(11021536-11021624)
chr2 (209-311)||(361448-361550)
chr2 (223-311)||(33196-33284)
chr2 (223-311)||(41708430-41708518)
chr2 (223-311)||(42880811-42880899)
chr2 (191-304)||(16763086-16763199)
chr2 (191-311)||(11315336-11315456)
chr2 (223-311)||(15373888-15373976)
chr2 (223-311)||(37418769-37418857)
chr2 (97-304)||(40560233-40560441)
chr2 (223-311)||(42003490-42003578)
chr2 (191-304)||(39664769-39664882)
chr2 (191-304)||(14389105-14389218)
chr2 (191-304)||(44709766-44709879)
chr2 (191-295)||(24208063-24208167)
chr2 (225-304)||(16764611-16764690)
chr2 (209-311)||(28246666-28246768)
chr2 (191-304)||(2766944-2767057)
chr2 (191-296)||(6786002-6786107)
chr2 (209-310)||(11023032-11023132)
chr2 (191-304)||(17696216-17696329)
chr2 (225-304)||(14387359-14387438)
chr2 (191-278)||(19908267-19908354)
[»] chr3 (54 HSPs)
chr3 (82-311)||(18430162-18430392)
chr3 (82-311)||(45257111-45257341)
chr3 (79-311)||(24382781-24383014)
chr3 (97-311)||(31887358-31887573)
chr3 (91-311)||(48633880-48634105)
chr3 (85-311)||(23888666-23888893)
chr3 (82-311)||(23774155-23774384)
chr3 (84-296)||(33852563-33852776)
chr3 (79-311)||(41020891-41021124)
chr3 (97-311)||(2977235-2977450)
chr3 (84-311)||(33113074-33113301)
chr3 (134-311)||(40508854-40509032)
chr3 (82-311)||(51454137-51454371)
chr3 (223-311)||(45897053-45897141)
chr3 (98-259)||(1845839-1846001)
chr3 (178-311)||(39641827-39641960)
chr3 (223-311)||(33111844-33111932)
chr3 (234-299)||(24381759-24381824)
chr3 (178-311)||(45898336-45898469)
chr3 (223-311)||(1847645-1847733)
chr3 (223-299)||(2975475-2975551)
chr3 (223-311)||(23887201-23887289)
chr3 (223-311)||(48635373-48635461)
chr3 (223-311)||(40508496-40508584)
chr3 (223-311)||(45255486-45255574)
chr3 (191-304)||(53190780-53190893)
chr3 (234-306)||(18428757-18428829)
chr3 (97-304)||(30599844-30600052)
chr3 (179-296)||(21348741-21348858)
chr3 (97-304)||(2226079-2226286)
chr3 (224-299)||(31885533-31885608)
chr3 (191-304)||(27899102-27899215)
chr3 (191-304)||(41977760-41977873)
chr3 (191-304)||(51684620-51684733)
chr3 (223-311)||(33850985-33851073)
chr3 (191-278)||(3152239-3152326)
chr3 (191-304)||(17515320-17515433)
chr3 (223-264)||(37865434-37865475)
chr3 (191-304)||(44794218-44794330)
chr3 (85-138)||(45898271-45898324)
chr3 (191-304)||(54898447-54898560)
chr3 (191-295)||(35905733-35905837)
chr3 (223-311)||(40998518-40998606)
chr3 (225-309)||(41944581-41944665)
chr3 (225-304)||(38193510-38193589)
chr3 (225-304)||(41979352-41979431)
chr3 (225-304)||(46308817-46308896)
chr3 (225-304)||(53094273-53094352)
chr3 (191-304)||(2660222-2660335)
chr3 (225-304)||(3150262-3150341)
chr3 (225-304)||(54900074-54900153)
chr3 (225-299)||(23291585-23291659)
chr3 (225-275)||(53092662-53092712)
chr3 (179-235)||(54092765-54092821)
[»] chr5 (37 HSPs)
chr5 (85-311)||(18728496-18728723)
chr5 (81-311)||(35395336-35395565)
chr5 (85-311)||(32087517-32087744)
chr5 (97-311)||(43317966-43318181)
chr5 (91-311)||(33256403-33256624)
chr5 (78-311)||(38177980-38178214)
chr5 (78-311)||(38205204-38205438)
chr5 (97-311)||(35292288-35292502)
chr5 (178-311)||(38596871-38597004)
chr5 (103-247)||(38597012-38597157)
chr5 (223-311)||(32089925-32090013)
chr5 (134-296)||(24496761-24496924)
chr5 (78-254)||(32838387-32838567)
chr5 (223-311)||(40330515-40330603)
chr5 (223-306)||(33257760-33257843)
chr5 (225-311)||(32835879-32835965)
chr5 (97-304)||(17574328-17574535)
chr5 (223-311)||(35291051-35291139)
chr5 (223-311)||(42619292-42619380)
chr5 (223-303)||(38176643-38176723)
chr5 (223-303)||(38203867-38203947)
chr5 (191-296)||(2179805-2179910)
chr5 (191-304)||(36057614-36057727)
chr5 (97-304)||(18624914-18625122)
chr5 (223-311)||(18726568-18726656)
chr5 (223-306)||(24232159-24232243)
chr5 (221-311)||(24498065-24498155)
chr5 (191-304)||(7267853-7267966)
chr5 (191-304)||(30468281-30468394)
chr5 (179-304)||(34327645-34327770)
chr5 (191-296)||(42473608-42473713)
chr5 (223-272)||(43316822-43316871)
chr5 (208-304)||(24541230-24541326)
chr5 (225-304)||(12738736-12738815)
chr5 (225-304)||(12801559-12801638)
chr5 (191-278)||(29621782-29621869)
chr5 (225-304)||(30463910-30463989)
[»] chr6 (23 HSPs)
chr6 (79-311)||(29077331-29077564)
chr6 (79-311)||(4641358-4641591)
chr6 (79-311)||(29112303-29112536)
chr6 (97-303)||(3018338-3018545)
chr6 (79-311)||(2968142-2968375)
chr6 (223-311)||(17950564-17950652)
chr6 (223-311)||(4646216-4646304)
chr6 (223-311)||(30639614-30639702)
chr6 (223-311)||(35174394-35174482)
chr6 (191-299)||(13613583-13613691)
chr6 (223-311)||(29114776-29114864)
chr6 (223-311)||(31210440-31210528)
chr6 (191-278)||(32439092-32439179)
chr6 (225-304)||(32518497-32518576)
chr6 (209-311)||(35175882-35175984)
chr6 (195-303)||(14338480-14338588)
chr6 (199-311)||(24662483-24662595)
chr6 (179-311)||(30891127-30891259)
chr6 (191-278)||(20523402-20523489)
chr6 (209-311)||(17952061-17952163)
chr6 (191-296)||(3456766-3456871)
chr6 (81-124)||(30641219-30641262)
chr6 (191-292)||(7372959-7373060)
[»] scaffold0477 (1 HSPs)
scaffold0477 (81-311)||(6524-6755)
[»] scaffold1041 (1 HSPs)
scaffold1041 (209-291)||(2121-2203)
[»] scaffold0058 (3 HSPs)
scaffold0058 (191-304)||(3304-3417)
scaffold0058 (191-304)||(4476-4589)
scaffold0058 (225-304)||(14343-14422)
[»] scaffold0129 (1 HSPs)
scaffold0129 (93-216)||(4557-4681)


Alignment Details
Target: chr1 (Bit Score: 206; Significance: 1e-112; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 78 - 311
Target Start/End: Original strand, 35479863 - 35480096
Alignment:
Q  78 ttgaactttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcat 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  35479863 ttgaactttttcaaattcaatcaaattagtccctgaacacgtggcttctttcttgccacgcgtacaagacaacaaagcatgcatggcgacagatcagcat 35479962  T
Q  178 gctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccga 277  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||    
T  35479963 gctaacagagcacttggacggaaggacctttttgatggacgtctgacaaattcatagattaagttgatatttcgcataattgagggatgaatttggctga 35480062  T
Q  278 tccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||| ||||||||||||||||||||||||||||    
T  35480063 tccgtgaaaattcaaggacgaagttgatggttca 35480096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 82 - 311
Target Start/End: Complemental strand, 42134715 - 42134485
Alignment:
Q  82 actttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-ct 180  Q
    |||||||| ||||||||||||||||||| |||||| |||||||| |||| |||||| ||||||||||||| |||||||| || ||||| ||| |||| ||    
T  42134715 actttttccaattcaatcaaattagtccttgaacatgtggcttccttcttgccacgtgtacaagacaacacagcatgcagggtgacatgtcaacatggct 42134616  T
Q  181 aacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatcc 280  Q
    ||| ||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||    
T  42134615 aacggagcacttggacggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgattttggccgaccc 42134516  T
Q  281 gtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||||||||||||| |||||||||||    
T  42134515 gtaaaaattcaaggacgaatttgatggttca 42134485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 85 - 311
Target Start/End: Original strand, 46638701 - 46638928
Alignment:
Q  85 ttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-ctaac 183  Q
    ||||| |||||||||||||| |||||||||||||||||||| || | |||||||||||||||||||| | |||||| ||||||| ||||||||| |||||    
T  46638701 ttttccaattcaatcaaattcgtccctgaacacgtggcttcctttttgccacgcgtacaagacaacacaacatgcaaggcgacagatcagcatggctaac 46638800  T
Q  184 agagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgta 283  Q
     ||||||||||||||| ||||||||||| |||| |||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||  |||     
T  46638801 ggagcacttggacggagggacctttttggtggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggatgaagttggccgacgcgtg 46638900  T
Q  284 aaaattcaaggacgaagttgatggttca 311  Q
    |||||||| | ||||| |||||||||||    
T  46638901 aaaattcaggaacgaatttgatggttca 46638928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 82 - 298
Target Start/End: Original strand, 45380875 - 45381092
Alignment:
Q  82 actttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-ct 180  Q
    |||||||| ||||||||||||||||||| ||||||||||||||| |||| |||||| ||||||||||||| |||||||| |||||||| ||| |||| ||    
T  45380875 actttttccaattcaatcaaattagtccttgaacacgtggcttccttcttgccacgtgtacaagacaacacagcatgcagggcgacatgtcaccatggct 45380974  T
Q  181 aacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatcc 280  Q
    ||| ||||||||||||||| | |||||||||||||| |||||||||||||| | | |||||||||||||||||||||||||||||||||||| ||   ||    
T  45380975 aacggagcacttggacggaggaacctttttgatggacgtctgacaaattcatgaactaagttgatatttcgcataattgagggatgaatttgaccttccc 45381074  T
Q  281 gtaaaaattcaaggacga 298  Q
    ||||||||| ||||||||    
T  45381075 gtaaaaatttaaggacga 45381092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 85 - 311
Target Start/End: Original strand, 36895404 - 36895631
Alignment:
Q  85 ttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-ctaac 183  Q
    ||||| |||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||| | |||||| | ||||| ||||||||| |||||    
T  36895404 ttttccaattcaatcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaagacgacagatcagcatggctaac 36895503  T
Q  184 agagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgta 283  Q
     ||||||||||||| | |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||| ||| ||| ||||  |||     
T  36895504 ggagcacttggacgaagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgatggacgaagttgaccgacgcgtg 36895603  T
Q  284 aaaattcaaggacgaagttgatggttca 311  Q
    |||||||| |||| || |||||||||||    
T  36895604 aaaattcagggacaaatttgatggttca 36895631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 84 - 323
Target Start/End: Original strand, 18183837 - 18184077
Alignment:
Q  84 tttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-ctaa 182  Q
    |||||| | ||| ||||||||||||| |||||||||||||||||| | |||||| ||||||||||||| | |||||  | ||||| ||||||||| ||||    
T  18183837 tttttccacttccatcaaattagtccttgaacacgtggcttcttttttgccacgtgtacaagacaacacaacatgctggacgacaaatcagcatggctaa 18183936  T
Q  183 cagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgt 282  Q
    | ||||||||| | | | |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||    
T  18183937 cggagcacttg-atgaagggacatttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgattttggccgaaccgt 18184035  T
Q  283 aaaaattcaaggacgaagttgatggttcattc-tgatgatgt 323  Q
    |||||||||| |||||| ||||||||||| || |||||||||    
T  18184036 aaaaattcaaagacgaatttgatggttcactcgtgatgatgt 18184077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 79 - 311
Target Start/End: Complemental strand, 44157668 - 44157436
Alignment:
Q  79 tgaactttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg 178  Q
    ||||||||||| ||||||||||||||||||  ||||||||||||||| |||| |||||| ||||||||||||| | |||||| |||||||| |||  |||    
T  44157668 tgaactttttccaattcaatcaaattagtct-tgaacacgtggcttccttcttgccacgtgtacaagacaacacaacatgcagggcgacatgtcactatg 44157570  T
Q  179 -ctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccga 277  Q
     || || |||||||| ||||||||||| ||||| ||||| |||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  44157569 gctgacggagcacttagacggaaggactttttttatggacgtctaacaaattcagggactaagttgatattttgcataattgagggatgaatttggccga 44157470  T
Q  278 tccgtaaaaattcaaggacgaagttgatggttca 311  Q
     |||| |||||| ||||||||  |||||||||||    
T  44157469 cccgtgaaaatttaaggacgagtttgatggttca 44157436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 80 - 311
Target Start/End: Original strand, 33685138 - 33685369
Alignment:
Q  80 gaactttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg- 178  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||| |||| |||||| ||||||||||||  | |||||| ||||||| ||| |||||     
T  33685138 gaactttttccaattcaatcaaattagtccttgaacacgtggcttccttcttgccacgtgtacaagacaactcaacatgcagggcgacacatcggcatgg 33685237  T
Q  179 ctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgat 278  Q
    ||||| ||||||||||| ||| ||| ||||| ||||||  | |||||||||||  |||||| |||||||||||||||||||||||||||||||| ||||     
T  33685238 ctaacggagcacttggatggagggatctttt-gatggagatgtgacaaattcaatgattaaattgatatttcgcataattgagggatgaatttgaccgac 33685336  T
Q  279 ccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||||||| ||||||| |||||||||||    
T  33685337 ccgtaaaaattcagggacgaatttgatggttca 33685369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 87 - 245
Target Start/End: Complemental strand, 6575418 - 6575261
Alignment:
Q  87 ttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatgctaacaga 186  Q
    ||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||   |||||    
T  6575418 ttcaaattcaatcaaattagtccttgaacacgtggcttccttcttgccacgcgtacaagacaacaaagcatgcatgacgacatatcagcatg-gcacaga 6575320  T
Q  187 gcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgat 245  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  6575319 gcactttgacggaaggacctttttgatagatgtctgacaaattcagggactaagttgat 6575261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 85 - 277
Target Start/End: Complemental strand, 31801863 - 31801670
Alignment:
Q  85 ttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-ctaac 183  Q
    ||||| |||||||||||||| ||||||||||||||| |||| |||| |||||||||||||||||||| | |||||| | ||||| ||||||||| |||||    
T  31801863 ttttccaattcaatcaaattcgtccctgaacacgtgacttccttcttgccacgcgtacaagacaacacaacatgcaagacgacaaatcagcatggctaac 31801764  T
Q  184 agagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccga 277  Q
     ||||||||||||||| |||||||||||||||| |||| ||||||| | ||| |||||||||||||||||||||||||||| ||| ||| ||||    
T  31801763 ggagcacttggacggagggacctttttgatggacgtctcacaaatttaaggactaagttgatatttcgcataattgagggacgaagttgaccga 31801670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 79 - 311
Target Start/End: Complemental strand, 27940844 - 27940611
Alignment:
Q  79 tgaactttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg 178  Q
    ||||||||||| || ||||||||||| |||||||||||||||||||| |||| ||||||||||||||||| || | |||||| ||  |||| ||||||||    
T  27940844 tgaactttttccaaatcaatcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaagacagcacatcatgcaaggttacatgtcagcatg 27940745  T
Q  179 -ctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccga 277  Q
     ||||| |||| | |  ||||| |||||||||||||||| |||||| ||||||| ||||||| |||||||||||||||||||||||| ||||||| || |    
T  27940744 gctaacggagcccgttaacggagggacctttttgatggacgtctgataaattcaaggattaaattgatatttcgcataattgagggacgaatttgaccaa 27940645  T
Q  278 tccgtaaaaattcaaggacgaagttgatggttca 311  Q
     | || |||||||| |||| || |||||||||||    
T  27940644 cctgtgaaaattcagggactaaattgatggttca 27940611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 79 - 311
Target Start/End: Original strand, 47269344 - 47269577
Alignment:
Q  79 tgaactttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg 178  Q
    ||||||||||| || ||||||||||| |||||||||||||||||||| |||| |||||||||||| |||| || | |||||  | |||||| ||||||||    
T  47269344 tgaactttttccaaatcaatcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaggacagcacaccatgccagacgacatgtcagcatg 47269443  T
Q  179 -ctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccga 277  Q
     ||||| |||| | |  ||||| |||||||||||||||| || |||||||||||||||| || |||| |||||| ||||||||||||  |||||||||||    
T  47269444 gctaacggagcccgttaacggagggacctttttgatggacgtttgacaaattcagggatgaaattgaaatttcgtataattgagggactaatttggccga 47269543  T
Q  278 tccgtaaaaattcaaggacgaagttgatggttca 311  Q
      ||| |||||||| ||||||| |||||||||||    
T  47269544 cgcgtgaaaattcagggacgaatttgatggttca 47269577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 5784867 - 5784955
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||| ||| |||| |||| |||||||| |||||||||||||| ||||    
T  5784867 acaaattcagggattaaattgatatttcgcataattgagggacgaagttgaccgacccgtgaaaattcagggacgaagttgatgattca 5784955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 11152636 - 11152548
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    |||||||| |||||||| |||||||||||||||||||||||| ||| |||||||| |||| |||||||| |||||||||||||| ||||    
T  11152636 acaaattctgggattaaattgatatttcgcataattgagggacgaaattggccgacccgtgaaaattcagggacgaagttgatgattca 11152548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 31803700 - 31803788
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||||||||||| |||||||||||||||||||| ||| ||| |||||||| |||| |||||||| |||||||||||||| ||||    
T  31803700 acaaattcagggattaaattgatatttcgcataattgaaggacgaagttggccgacccgtgaaaattcagggacgaagttgatgattca 31803788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 223 - 306
Target Start/End: Original strand, 27952500 - 27952583
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatg 306  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||| | |||||| |||| |||||||||    
T  27952500 acaaattcagggattaaattgatatttcgcataattgagggacgaatttggccgacccgtgataattcagggactaagttgatg 27952583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 223 - 304
Target Start/End: Complemental strand, 18180591 - 18180510
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttga 304  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||  ||| |||||||| |||| |||||||    
T  18180591 acaaattcaggaattaaattgatatttcgcataattgagggatgaatttggccgagtcgtgaaaattcagggacaaagttga 18180510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 33679350 - 33679262
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||| ||||||| |||||||||||||||||||||||| ||||||||| || ||||||||||||| |||| || |||||| ||||    
T  33679350 acaaattcaaggattaaattgatatttcgcataattgagggacgaatttggctgacccgtaaaaattcatggacaaaattgatgattca 33679262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 45379176 - 45379088
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||| ||||||||| |||||||||||||||||| ||||| ||| |||||||| |||| |||||||| |||||||||||||| ||||    
T  45379176 acaaatttagggattaaattgatatttcgcataattaagggacgaagttggccgacccgtgaaaattcagggacgaagttgatgattca 45379088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 225 - 311
Target Start/End: Complemental strand, 35478176 - 35478090
Alignment:
Q  225 aaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||||||||| ||||||||| ||||||||||||||  ||||||||||| |||| |||||||| ||| |||||||||| ||||    
T  35478176 aaattcagggattaaattgatattttgcataattgagggactaatttggccgacccgtgaaaattcagggatgaagttgatgattca 35478090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 191 - 304
Target Start/End: Original strand, 4855967 - 4856080
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    ||||||||| ||||| |||||||||| |||||  ||||||||||| ||| ||||||||||||| |||| ||||| | |||||||||||   | |||||||    
T  4855967 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgtatttggccgattttttaaaattc 4856066  T
Q  291 aaggacgaagttga 304  Q
    ||||||||| ||||    
T  4856067 aaggacgaatttga 4856080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 97 - 284
Target Start/End: Complemental strand, 15104659 - 15104471
Alignment:
Q  97 atcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-ctaacagagcacttgga 195  Q
    ||||||||||||| || |||||||||| | || | | |||| ||||||||||||| |||||||| |  |||| |||| ||   ||||  ||||  |||||    
T  15104659 atcaaattagtccttgtacacgtggctgccttattgacacgtgtacaagacaacacagcatgcaagaagacacatcatcaccactaatggagcttttgga 15104560  T
Q  196 cggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaa 284  Q
    |||||||||| |||||||||| |||||  ||||||||||| ||| | ||||||||||| |||| ||| | ||||||||| |||| ||||    
T  15104559 cggaaggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaggaacgaatttggctgatcggtaa 15104471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 191 - 304
Target Start/End: Original strand, 34778139 - 34778252
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    ||||||||| ||||| ||||||||||  ||||  ||||||||||| ||| ||||||||||||| |||| ||||| | |||||||||||   | |||||||    
T  34778139 ttggacggagggaccattttgatggacatctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgtatttggccgattttttaaaattc 34778238  T
Q  291 aaggacgaagttga 304  Q
    ||||||||| ||||    
T  34778239 aaggacgaatttga 34778252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 42136244 - 42136332
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||||||||||| |||||||||||||||||| | ||| ||| ||| ||||||| |||||||| | | |||||||||||| ||||    
T  42136244 acaaattcagggattaaattgatatttcgcataattaaaggacgaagttgaccgatccataaaaatttaggaacgaagttgatgattca 42136332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 44159294 - 44159382
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||||| ||||| ||||||||| |||||||| ||||| ||| ||| |||||| || |||||||| |||||||||||||| ||||    
T  44159294 acaaattcaggaattaaattgatattttgcataattaagggacgaaattgaccgatctgtgaaaattcagggacgaagttgatgattca 44159382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 311
Target Start/End: Complemental strand, 5783469 - 5783367
Alignment:
Q  209 ttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggt 308  Q
    |||||||| |||  ||||||||||||| ||  |||||||||||   ||||| | ||||||||||||||| || |||||||||| ||||||| ||||||||    
T  5783469 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaattgggagatgaatttggccgacccctaaaaattcagggacgaaattgatggt 5783370  T
Q  309 tca 311  Q
    |||    
T  5783369 tca 5783367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 311
Target Start/End: Original strand, 6577107 - 6577193
Alignment:
Q  225 aaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||||||||| |||||||||||||||||||| |||  ||||| ||||| || |||||  ||| |||||||||||||| ||||    
T  6577107 aaattcagggattaaattgatatttcgcataattgaaggactaatttagccgacccataaaatgtcagggacgaagttgatgattca 6577193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 179 - 304
Target Start/End: Complemental strand, 2869714 - 2869589
Alignment:
Q  179 ctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgat 278  Q
    ||||||||||  ||||||||| ||||| |||||||||| |||||  ||||| || || ||| | ||||||||||| |||| ||||| ||||||| |||||    
T  2869714 ctaacagagcttttggacggagggaccattttgatggacgtctgtaaaatttagagactaaatagatatttcgcaaaattcagggacgaatttgaccgat 2869615  T
Q  279 ccgtaaaaattcaaggacgaagttga 304  Q
       | |||||||||||||||| ||||    
T  2869614 ttttgaaaattcaaggacgaatttga 2869589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 46636856 - 46636768
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||||  ||||| |||||||||||||||||||| ||| ||| || ||||| |||| ||||||||  ||||||||||||| ||||    
T  46636856 acaaattcagaaattaaattgatatttcgcataattgaaggacgaagttagccgacccgtgaaaattcagagacgaagttgatgattca 46636768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 47264215 - 47264127
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    |||||||||||||| || |||| |||||||||||||||||||  || ||||||||  ||| |||||||| |||| || |||||||||||    
T  47264215 acaaattcagggatgaaattgaaatttcgcataattgagggactaaattggccgacgcgtgaaaattcagggactaacttgatggttca 47264127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 296
Target Start/End: Original strand, 31238496 - 31238601
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    |||||| || ||||| |||||||||| |||||  ||||||||||| ||| | ||||||||||| |||| |||||  ||||||||||||   | |||||||    
T  31238496 ttggacagatggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacaaatttggccgattttttaaaattc 31238595  T
Q  291 aaggac 296  Q
    ||||||    
T  31238596 aaggac 31238601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 304
Target Start/End: Original strand, 6818584 - 6818792
Alignment:
Q  97 atcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-ctaacagagcacttgga 195  Q
    ||||||||||||| || |||||||||| | || | | |||| ||||| ||||||| | |||||| |  ||||| ||| ||   ||||| ||||  |||||    
T  6818584 atcaaattagtccttgtacacgtggctgccttgttgacacgtgtacatgacaacacaacatgcaagaggacatgtcatcaccactaacggagcttttgga 6818683  T
Q  196 cggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaagga 295  Q
    |||| ||||| |||||||||| |||||  ||||||||||| ||| | ||||||| ||  |||  ||||| || ||||||||||   | ||||||||||||    
T  6818684 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgctaaatccagggacgagtttggccgattttttaaaattcaagga 6818783  T
Q  296 cgaagttga 304  Q
    |||| ||||    
T  6818784 cgaatttga 6818792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 246 - 306
Target Start/End: Complemental strand, 36894890 - 36894830
Alignment:
Q  246 atttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatg 306  Q
    |||||||||||||||  || ||| |||||||| ||||||||||||| ||||||||||||||    
T  36894890 atttcgcataattgaatgacgaagttggccgacccgtaaaaattcagggacgaagttgatg 36894830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 304
Target Start/End: Complemental strand, 25276831 - 25276752
Alignment:
Q  225 aaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttga 304  Q
    ||||||||||| ||| ||||||||||||| |||| | ||||||| |||||||||   | |||||||||||||||| ||||    
T  25276831 aaattcagggactaatttgatatttcgcaaaattcaaggatgaaattggccgatttttcaaaattcaaggacgaatttga 25276752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 304
Target Start/End: Original strand, 37345962 - 37346041
Alignment:
Q  225 aaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttga 304  Q
    ||||||||||| ||| ||||||||||||| |||| ||||||||| |||| ||||   | |||||||||||||||| ||||    
T  37345962 aaattcagggactaatttgatatttcgcaaaattcagggatgaaattggtcgatttttcaaaattcaaggacgaatttga 37346041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 296
Target Start/End: Original strand, 9121669 - 9121774
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    ||||||||| ||||   ||||||||| |||||  ||||||||||| ||| ||||||||||| | |||| ||||| ||| |||||||||   | |||||||    
T  9121669 ttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaatttagggacgaaattggccgatttttcaaaattc 9121768  T
Q  291 aaggac 296  Q
    ||||||    
T  9121769 aaggac 9121774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 304
Target Start/End: Original strand, 25278369 - 25278482
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    ||||||||| ||||| |||||||||| || ||  ||||||| ||| ||| | | ||||||||| |||| ||||| ||||||| |||||   | |||||||    
T  25278369 ttggacggagggaccattttgatggacgtatgtaaaattcaaggactaaataggtatttcgcaaaattcagggacgaatttgaccgattttttaaaattc 25278468  T
Q  291 aaggacgaagttga 304  Q
    ||||||||| ||||    
T  25278469 aaggacgaatttga 25278482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 97 - 241
Target Start/End: Complemental strand, 43868832 - 43868687
Alignment:
Q  97 atcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-ctaacagagcacttgga 195  Q
    |||||||| |||| || ||||||| |||| || | | |||| |||||||||||||   |||||||| |||||  ||||||   ||||| ||||| |||||    
T  43868832 atcaaattggtccttgtacacgtgacttccttgtagacacgtgtacaagacaacatgacatgcatgacgacaactcagcagcactaacggagcatttgga 43868733  T
Q  196 cggaaggacctttttgatggatgtctgacaaattcagggattaagt 241  Q
    |||||||||  ||||||||||||| ||  ||||||| |||| ||||    
T  43868732 cggaaggactattttgatggatgtttgttaaattcaaggataaagt 43868687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 304
Target Start/End: Original strand, 46583557 - 46583670
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    ||||||||| ||||   ||||||||| |||||  ||||||||||| ||| ||||||||||||| |||| |||||  || ||| |||||   | |||||||    
T  46583557 ttggacggagggacaaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacaaaattgaccgatttttcaaaattc 46583656  T
Q  291 aaggacgaagttga 304  Q
    ||||||||| ||||    
T  46583657 aaggacgaatttga 46583670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 304
Target Start/End: Complemental strand, 27087492 - 27087293
Alignment:
Q  105 agtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-ctaacagagcacttggacggaagga 203  Q
    ||||| || |||||||||| | || | | |||| ||||||||||||| |||||||| || |||| |||| ||   ||||| ||||  ||||||||| ||     
T  27087492 agtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaagg-gacacatcatcaccactaacggagcttttggacggatggg 27087394  T
Q  204 cctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttg 303  Q
    || |||||||||| || ||  ||||||||||| ||| | ||||||||||| |||| |||||  |||||| |||||   | |||||| ||||||||| |||    
T  27087393 ccattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcagggacaaatttgaccgattttttaaaatttaaggacgaatttg 27087294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 304
Target Start/End: Complemental strand, 26223676 - 26223597
Alignment:
Q  225 aaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttga 304  Q
    ||||||||||| ||| ||||||||||||| |||| ||||| ||| ||| |||||   | |||||||||||||||| ||||    
T  26223676 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttga 26223597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 304
Target Start/End: Complemental strand, 34776658 - 34776579
Alignment:
Q  225 aaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttga 304  Q
    ||||||||||| ||| ||||||||||| | |||| ||||| ||| |||||||||   | |||||||||||||||| ||||    
T  34776658 aaattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 34776579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 296
Target Start/End: Complemental strand, 46582099 - 46582028
Alignment:
Q  225 aaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggac 296  Q
    ||||||||||| ||| ||||||||||||| |||| ||||| ||| |||||||||   | |||||||||||||    
T  46582099 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggac 46582028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 299
Target Start/End: Complemental strand, 33599307 - 33599233
Alignment:
Q  225 aaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaa 299  Q
    |||||||| |||||| ||||||||||||| |||| | ||| ||||||| |||||   | ||||||||||||||||    
T  33599307 aaattcagagattaatttgatatttcgcaaaattcatggacgaatttgaccgatttttcaaaattcaaggacgaa 33599233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 304
Target Start/End: Complemental strand, 8168029 - 8167952
Alignment:
Q  227 attcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttga 304  Q
    ||||||||| ||| ||||||||||||| |||| || || ||| |||||||||   | |||||||||||||||| ||||    
T  8168029 attcagggactaatttgatatttcgcaaaattcagagacgaaattggccgatttttcaaaattcaaggacgaatttga 8167952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 304
Target Start/End: Original strand, 33602645 - 33602758
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    ||||||||| ||||   ||||| ||| |||||  ||||||||||| ||| |||||||||| || |||| ||||| ||| ||| |||||   | |||||||    
T  33602645 ttggacggagggactaatttgacggacgtctgtaaaattcagggactaatttgatatttcacaaaattcagggacgaaattgaccgatttttcaaaattc 33602744  T
Q  291 aaggacgaagttga 304  Q
    ||||||||| ||||    
T  33602745 aaggacgaatttga 33602758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 304
Target Start/End: Complemental strand, 37344465 - 37344352
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    ||||||||| ||||| |||||||||| || ||  |||||||  || ||| | | ||||||||| |||| ||||| ||||||| |||||   | |||||||    
T  37344465 ttggacggagggaccattttgatggacgtatgtaaaattcaaagactaaataggtatttcgcaaaattcagggacgaatttgaccgattttttaaaattc 37344366  T
Q  291 aaggacgaagttga 304  Q
    ||||||||| ||||    
T  37344365 aaggacgaatttga 37344352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 264
Target Start/End: Original strand, 51896141 - 51896226
Alignment:
Q  179 ctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgaggga 264  Q
    ||||||||||  ||||||||| ||||  ||||||||||  ||||  ||||||||||| ||| | ||||||||||| |||| |||||    
T  51896141 ctaacagagcttttggacggagggactattttgatggacatctgtaaaattcagggactaaatagatatttcgcaaaattcaggga 51896226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 304
Target Start/End: Original strand, 25278975 - 25279067
Alignment:
Q  212 atggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttga 304  Q
    ||||| |||||  ||||||||||| ||| | ||||||||||| |||| ||| | ||||||||| |||   | |||||||||||||||| ||||    
T  25278975 atggacgtctgtaaaattcagggactaaatagatatttcgcaaaatttaggaacgaatttggctgatttttgaaaattcaaggacgaatttga 25279067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 190; Significance: 1e-103; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 78 - 311
Target Start/End: Complemental strand, 32822597 - 32822364
Alignment:
Q  78 ttgaactttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcat 177  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  32822597 ttgaactttttcaaattcaatcaaattagtccctgaacacgtggcttccttcttgccacgcgtacaagacaacaaagcatgcatggcgacagatcagcat 32822498  T
Q  178 gctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccga 277  Q
    ||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||   |||||||||||||||||||||||||    
T  32822497 gctaacaaagcacttggacggaaggacctttttgatggacatctgacaaattcagggactaagttgatattttaaataattgagggatgaatttggccga 32822398  T
Q  278 tccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||| ||||||||||||||||||||||||||||||    
T  32822397 tccataaaaattcaaggacgaagttgatggttca 32822364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 82 - 311
Target Start/End: Original strand, 42897665 - 42897895
Alignment:
Q  82 actttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-ct 180  Q
    |||||||| || | |||||||||||||| ||||||||||||||| |||| |||||| ||||||||||||| |||||||| | ||||| ||||||||| ||    
T  42897665 actttttccaaataaatcaaattagtccttgaacacgtggcttccttcttgccacgtgtacaagacaacacagcatgcaggacgacagatcagcatggct 42897764  T
Q  181 aacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatcc 280  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||||| ||| |||||||||||||| ||||||||||||| |||||||||||| ||    
T  42897765 aacagagcacttggacggagggacctttttgatggacgtctgacaaattcaaggactaagttgatatttcacataattgagggacgaatttggccgaccc 42897864  T
Q  281 gtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||||||||||| | |||||||||||    
T  42897865 gtaaaaattcaaggacggatttgatggttca 42897895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 79 - 311
Target Start/End: Complemental strand, 1320853 - 1320620
Alignment:
Q  79 tgaactttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg 178  Q
    ||||||||||  ||||||||||||||||||| ||||||||||||||| |||| |||||| ||||||||||||| |||||||| |||||||| ||| ||||    
T  1320853 tgaacttttttcaattcaatcaaattagtccttgaacacgtggcttccttcttgccacgtgtacaagacaacatagcatgcagggcgacatgtcaccatg 1320754  T
Q  179 -ctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccga 277  Q
     || || || |||||||||||||||||||| || ||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||    
T  1320753 gctgacggaacacttggacggaaggaccttatttatggacgtctgacaaattcagggactaagttgatattttgcataattgagggatgaatttagccga 1320654  T
Q  278 tccgtaaaaattcaaggacgaagttgatggttca 311  Q
     |||| |||||| |||||| || |||||||||||    
T  1320653 cccgtgaaaatttaaggacaaatttgatggttca 1320620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 79 - 311
Target Start/End: Original strand, 462260 - 462491
Alignment:
Q  79 tgaactttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg 178  Q
    ||||||||||||||||||||||||||||||| |||||||   ||||| |||| |||||| ||| |||| |||| | |||||| ||||||| |||||||||    
T  462260 tgaactttttcaaattcaatcaaattagtccttgaacact--gcttccttcttgccacgtgtataagataacacaacatgcacggcgacaaatcagcatg 462357  T
Q  179 -ctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccga 277  Q
     ||||||||||||||||| ||| ||| |||||||||||| || ||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||    
T  462358 gctaacagagcacttggatggagggatctttttgatggacgtttgacaaattcaaggactaagttgatatttcgcataattgacggatgaatttggccga 462457  T
Q  278 tccgtaaaaattcaaggacgaagttgatggttca 311  Q
    || |||||||||||| |||||| |||||||||||    
T  462458 tctgtaaaaattcaatgacgaatttgatggttca 462491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 85 - 278
Target Start/End: Original strand, 33750278 - 33750472
Alignment:
Q  85 ttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcat-gctaac 183  Q
    ||||| |||||||||||||| |||||||||||| ||||||| |||| |||||||||||||||||||| | |||||| | ||||| |||| ||| ||||||    
T  33750278 ttttccaattcaatcaaattcgtccctgaacacatggcttccttcttgccacgcgtacaagacaacacaacatgcaagacgacagatcaacatcgctaac 33750377  T
Q  184 agagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgat 278  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||    
T  33750378 agagcacttggacggagggacctttttgatgaatgtctgacaaattcagggactaagttgatatttcgcataattgagggacgaagttggccgat 33750472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 82 - 311
Target Start/End: Original strand, 37525914 - 37526144
Alignment:
Q  82 actttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-ct 180  Q
    |||||||| |||| |||||||||||||| ||||||||||||||| |||| |||||| ||| ||||||||| | ||| || | ||||| |||| |||| ||    
T  37525914 actttttccaattgaatcaaattagtccttgaacacgtggcttccttcttgccacgtgtataagacaacacaacatacaggacgacagatcaacatgact 37526013  T
Q  181 aacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatcc 280  Q
    ||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| | ||||||||| ||||  |    
T  37526014 aacagcgcacttggacggagggacctttttgatggatgtctgaaaaattcagggactaagttgatatttcgcataattgaagaatgaatttgaccgacgc 37526113  T
Q  281 gtaaaaattcaaggacgaagttgatggttca 311  Q
    || |||||||||||||||| |||||||||||    
T  37526114 gtgaaaattcaaggacgaatttgatggttca 37526144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 84 - 309
Target Start/End: Original strand, 33160041 - 33160267
Alignment:
Q  84 tttttcaaattcaatcaaattagtccctgaacacgtg-gcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-cta 181  Q
    |||||| ||||||||||||||||||| |||||||||| ||||||| || |||||| ||| ||||||||| | |||||| ||||||| ||||||||| |||    
T  33160041 tttttccaattcaatcaaattagtccttgaacacgtgagcttctt-cttgccacgtgtataagacaacacaacatgcagggcgacagatcagcatggcta 33160139  T
Q  182 acagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccg 281  Q
    ||||||||||| |  ||| |||||||||||||||  ||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||| | |    
T  33160140 acagagcacttaggtggagggacctttttgatgggcgtctgacaaattcagagactaagttgatatttcacataattgagggatgaatttggccgacctg 33160239  T
Q  282 taaaaattcaaggacgaagttgatggtt 309  Q
    | |||||||||||||||| |||||||||    
T  33160240 tgaaaattcaaggacgaatttgatggtt 33160267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 79 - 311
Target Start/End: Original strand, 31201031 - 31201264
Alignment:
Q  79 tgaactttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg 178  Q
    ||||||||||| || ||||||||||| |||||||||||| || |||| |||| ||||||| |||||||||||| | |||||| |||||||| ||||||||    
T  31201031 tgaactttttccaaatcaatcaaattcgtccctgaacacatgacttccttcttgccacgcatacaagacaacacatcatgcaaggcgacatgtcagcatg 31201130  T
Q  179 -ctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccga 277  Q
     ||||| |||| | |  ||||| |||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||| ||| ||||||||||||    
T  31201131 gctaacggagcccgttaacggagggacctttttgatggacgtctgataaattcagggattaaattgatatttcgcataattgatggacgaatttggccga 31201230  T
Q  278 tccgtaaaaattcaaggacgaagttgatggttca 311  Q
     |||| |||||||| |||| || |||||||||||    
T  31201231 cccgtgaaaattcagggactaaattgatggttca 31201264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 79 - 311
Target Start/End: Complemental strand, 8654735 - 8654503
Alignment:
Q  79 tgaactttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcat- 177  Q
    ||||||||||| ||||||||||||||||||| |||||| |||||||| |||| |||||| |||||||||||||  ||||||| |||||||| |||||||     
T  8654735 tgaactttttccaattcaatcaaattagtccttgaacatgtggcttccttcttgccacgtgtacaagacaacattgcatgcagggcgacatgtcagcatg 8654636  T
Q  178 gctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccga 277  Q
    |||||| ||||||||||||||| ||||| |||||||||| |||||| ||||||| | |||||  ||||||||||||||||||||| | ||||||| ||||    
T  8654635 gctaacggagcacttggacggagggacccttttgatggacgtctgataaattcaagaattaa-atgatatttcgcataattgaggaacgaatttgaccga 8654537  T
Q  278 tccgtaaaaattcaaggacgaagttgatggttca 311  Q
      ||||||||||||  ||| || |||||||||||    
T  8654536 ctcgtaaaaattcagagactaaattgatggttca 8654503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 100 - 311
Target Start/End: Original strand, 38882706 - 38882918
Alignment:
Q  100 aaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-ctaacagagcacttggacgg 198  Q
    ||||| |||| |||||||||| |||| || | |||||| ||||||||||||| |||||||| | ||||| |||| |||| ||||| ||||||||||||||    
T  38882706 aaattggtccttgaacacgtgacttccttgttgccacgagtacaagacaacacagcatgcaggacgacagatcaacatggctaacggagcacttggacgg 38882805  T
Q  199 aaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacga 298  Q
    | |||| ||||| ||||| |||||||||||||||||||||| ||||||| ||||||| |||| ||||||||||| ||||||||| |||||||||||||||    
T  38882806 agggacattttttatggacgtctgacaaattcagggattaaattgatatctcgcatagttgaaggatgaatttgaccgatccgtgaaaattcaaggacga 38882905  T
Q  299 agttgatggttca 311  Q
    | |||||||||||    
T  38882906 atttgatggttca 38882918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 91 - 311
Target Start/End: Complemental strand, 31821633 - 31821421
Alignment:
Q  91 aattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-ctaacagagca 189  Q
    ||||||||||||||||||||||||||||||||||| ||||         |||||||||||| | |||||| | ||||| ||||||| | ||||||||| |    
T  31821633 aattcaatcaaattagtccctgaacacgtggcttccttct---------tacaagacaacacatcatgcaagacgacagatcagcaaggctaacagagga 31821543  T
Q  190 cttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaatt 289  Q
    |||||||||| |||||||||||||||| |||||| |||||| |||| |||||||||||||||||||||||||||| ||| ||| ||||   || ||||||    
T  31821542 cttggacggagggacctttttgatggacgtctgataaattctgggactaagttgatatttcgcataattgagggacgaagttgaccgacgtgtgaaaatt 31821443  T
Q  290 caaggacgaagttgatggttca 311  Q
    || ||||||| ||||| |||||    
T  31821442 cagggacgaatttgattgttca 31821421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 209 - 311
Target Start/End: Original strand, 25707287 - 25707389
Alignment:
Q  209 ttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggt 308  Q
    ||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||| |||||| |    
T  25707287 ttgattgacgtctcacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatgcgtaaaaatttaaggatgaacttgatgat 25707386  T
Q  309 tca 311  Q
    |||    
T  25707387 tca 25707389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 209 - 311
Target Start/End: Original strand, 25373608 - 25373710
Alignment:
Q  209 ttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggt 308  Q
    ||||| || |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||| ||| |||||| |    
T  25373608 ttgattgacgtctgacaaattcaggaattaagttgatatttcgcataattgaggaatgaatttggccgatgcgtgaaaattcaaggatgaacttgatgat 25373707  T
Q  309 tca 311  Q
    |||    
T  25373708 tca 25373710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 40019247 - 40019159
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||| |||||||| |||||||||||||| ||||||||||||| ||||    
T  40019247 acaaattcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcaaagacgaagttgatgattca 40019159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 461267 - 461184
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatg 306  Q
    ||||||||||||||||| ||| |||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  461267 acaaattcagggattaaattgttatttcacataattgagggatgaatttggccgacccgtgaaaattcaaggacgaagttgatg 461184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 139 - 311
Target Start/End: Complemental strand, 9184559 - 9184386
Alignment:
Q  139 gtacaagacaacaaagcatgcatggcgacatatcagcatg-ctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggatt 237  Q
    ||||||||||||| | |||||| ||||||| |||||||   ||||   |||| ||||||||| ||||| ||| ||| || |||||||||||||||||| |    
T  9184559 gtacaagacaacacatcatgcagggcgacagatcagcagcactaatgaagcatttggacggagggaccatttcgatcgacgtctgacaaattcagggact 9184460  T
Q  238 aagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    || |||||||||||| || ||| | || ||||||||||||| |||  ||||||||||||||| |||||| ||||    
T  9184459 aatttgatatttcgcgtagttgggcgacgaatttggccgattcgtgcaaattcaaggacgaaattgatgattca 9184386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 223 - 306
Target Start/End: Original strand, 31823476 - 31823559
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatg 306  Q
    ||||||| ||||||||| |||||||||||||||||||||||| ||| |||||||| |||| |||||||| ||||||||||||||    
T  31823476 acaaatttagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtgaaaattcagggacgaagttgatg 31823559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 97 - 304
Target Start/End: Original strand, 8609714 - 8609921
Alignment:
Q  97 atcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-ctaacagagcacttgga 195  Q
    ||||| ||||||| || |||||||||| | || ||| |||| ||||||||||||| |||||||| || ||||  ||| ||   ||||| ||||  |||||    
T  8609714 atcaatttagtccttgtacacgtggctgccttgtcgacacgtgtacaagacaacacagcatgcaagg-gacacgtcatcaccactaacggagcttttgga 8609812  T
Q  196 cggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaagga 295  Q
    |||| ||||| |||||||||| |||||  ||||||||||| ||| | ||||||||||| |||| ||||| |||||||||||||   | |||||||||| |    
T  8609813 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaagaa 8609912  T
Q  296 cgaagttga 304  Q
    |||| ||||    
T  8609913 cgaatttga 8609921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 33368850 - 33368762
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||| ||||||| ||||||||||||||||||||| |||||||| | ||||| ||||||||||||| |||||| |||||| ||||    
T  33368850 acaaattcaaggattaaattgatatttcgcataattgagagatgaattcgaccgattcgtaaaaattcaaagacgaatttgatgattca 33368762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 33748423 - 33748335
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||||| ||||| |||||||||||||||||||| ||| ||| |||||||| |||| |||||||| |||||||||||||| ||||    
T  33748423 acaaattcaggaattaaattgatatttcgcataattgaaggacgaagttggccgacccgtgaaaattcagggacgaagttgatgattca 33748335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 42894867 - 42894784
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatg 306  Q
    ||||||||||||||||| |||||||||||||||||| ||||| |||||||| ||| |||| ||||||||| ||| |||||||||    
T  42894867 acaaattcagggattaaattgatatttcgcataattaagggacgaatttggtcgacccgtgaaaattcaaagacaaagttgatg 42894784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 132 - 304
Target Start/End: Complemental strand, 13282660 - 13282488
Alignment:
Q  132 gccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-ctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattc 230  Q
    |||||| ||||||||||||| |||||||| || |||| |||| ||   ||||| ||||  ||||||||| ||||| |||||||||| || ||  ||||||    
T  13282660 gccacgtgtacaagacaacagagcatgcaagg-gacacatcatcaccactaacggagcttttggacggagggaccattttgatggacgtttgtaaaattc 13282562  T
Q  231 agggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttga 304  Q
    ||||| ||| | ||||||||||| |||| ||||| |||||||||||||   | |||||||||||||||| ||||    
T  13282561 agggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttga 13282488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 223 - 300
Target Start/End: Complemental strand, 37524949 - 37524872
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaag 300  Q
    |||||||||| |||||  |||||||||| ||||||| ||||||||||||| |||| ||||||||||||||||||||||    
T  37524949 acaaattcagagattagattgatatttcacataattaagggatgaatttgaccgacccgtaaaaattcaaggacgaag 37524872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 31199576 - 31199488
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||||||||||| |||||||||| ||||||| ||||| |||||||||||| |||| | |||||| |||| ||||||||| ||||    
T  31199576 acaaattcagggattaaattgatatttctcataattaagggacgaatttggccgacccgtgataattcagggactaagttgatgattca 31199488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 24526987 - 24526904
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatg 306  Q
    ||||||||||||||||| |||||||||| ||||||||||||| ||| |||||||| ||||  ||||||| ||||||||| ||||    
T  24526987 acaaattcagggattaaattgatatttcacataattgagggacgaagttggccgacccgtgtaaattcagggacgaagtggatg 24526904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 241 - 311
Target Start/End: Complemental strand, 38881501 - 38881431
Alignment:
Q  241 ttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    |||| ||||||||||||||||||||||||||||| ||| ||| |||||||||||||||| |||||| ||||    
T  38881501 ttgacatttcgcataattgagggatgaatttggctgattcgtgaaaattcaaggacgaatttgatgattca 38881431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 191 - 304
Target Start/End: Original strand, 13108357 - 13108470
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    ||||||||| ||||| |||||||||| |||||  ||||||||||| ||| ||||||||||||| |||| ||||| | |||| ||||||   | |||||||    
T  13108357 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgtatttagccgattttttaaaattc 13108456  T
Q  291 aaggacgaagttga 304  Q
    ||||||||| ||||    
T  13108457 aaggacgaatttga 13108470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 32824271 - 32824339
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattca 291  Q
    |||||||||| |||||| ||||||||||||||||||||||||  ||||||||||| |||| ||||||||    
T  32824271 acaaattcagtgattaaattgatatttcgcataattgagggactaatttggccgacccgtgaaaattca 32824339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 304
Target Start/End: Complemental strand, 38547445 - 38547238
Alignment:
Q  97 atcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-ctaacagagcacttgga 195  Q
    ||||| ||||||| || |||||||||| | || | | |||| ||||||||||||| |||||||| || ||||  ||| ||   ||||| ||||  |||||    
T  38547445 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaagg-gacacgtcatcaccactaacggagcttttgga 38547347  T
Q  196 cggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaagga 295  Q
     ||| ||||| |||||||||| |||||  ||||||||||| ||| ||||||||||||| |||| | ||| | |||||||||||   | ||||||||||||    
T  38547346 tggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcatggacgtatttggccgattttttaaaattcaagga 38547247  T
Q  296 cgaagttga 304  Q
    |||| ||||    
T  38547246 cgaacttga 38547238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 223 - 314
Target Start/End: Complemental strand, 33158747 - 33158656
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttcattc 314  Q
    ||||||||| ||||||| ||||||||||||||||||||   |||||||||  | | |  ||||||||||||||||||||||||| |||||||    
T  33158747 acaaattcaaggattaaattgatatttcgcataattgaataatgaatttgagccacctataaaaattcaaggacgaagttgatgattcattc 33158656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 191 - 304
Target Start/End: Complemental strand, 27691277 - 27691164
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    ||||||||| ||||   ||||||||| |||||  ||||||||||| ||| ||||||||||||| |||| ||||| ||| |||||||||   | |||||||    
T  27691277 ttggacggagggacggatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattc 27691178  T
Q  291 aaggacgaagttga 304  Q
    ||||||||| ||||    
T  27691177 aaggacgaatttga 27691164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 28433749 - 28433834
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggt 308  Q
    ||||||||||||| ||  |||||||||||   |||||||||| ||||||||||||||| | |||||||| ||||||| ||||||||    
T  28433749 acaaattcagggactattttgatatttcgttaaattgagggacgaatttggccgatccttgaaaattcagggacgaaattgatggt 28433834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 304
Target Start/End: Original strand, 38548831 - 38548910
Alignment:
Q  225 aaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttga 304  Q
    ||||||||||||||| ||||||||||||| |||| ||||| ||| |||||||||   | |||||||||||||||| ||||    
T  38548831 aaattcagggattaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 38548910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 225 - 299
Target Start/End: Complemental strand, 13106893 - 13106819
Alignment:
Q  225 aaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaa 299  Q
    ||||||||||| ||| ||||||||||||| |||| ||||||||| |||||||||   | ||||||||||||||||    
T  13106893 aaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccgatttttcaaaattcaaggacgaa 13106819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 304
Target Start/End: Original strand, 26242335 - 26242448
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    ||||||||| ||||| |||||||||| |||||  |||||||| || ||| | ||||||||||| |||| ||||| ||||||||| |||   | |||||||    
T  26242335 ttggacggagggaccattttgatggacgtctgtaaaattcagagactaaatagatatttcgcaaaatttagggacgaatttggctgatttttgaaaattc 26242434  T
Q  291 aaggacgaagttga 304  Q
    ||| ||||| ||||    
T  26242435 aagaacgaaattga 26242448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 311
Target Start/End: Original strand, 9186646 - 9186733
Alignment:
Q  224 caaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    |||||| ||||| ||| ||||||||||||||||||  |||| || |||||| ||||| |  ||||||||||||| |||||||| ||||    
T  9186646 caaatttagggactaatttgatatttcgcataatttggggacgattttggctgatccttgtaaattcaaggacggagttgatgattca 9186733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 306
Target Start/End: Complemental strand, 10267921 - 10267846
Alignment:
Q  231 agggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatg 306  Q
    ||||||||| || ||||||||||||||| | ||| || |||| ||||| |||||||||||||||| || |||||||    
T  10267921 agggattaaattaatatttcgcataattaaaggacgattttgaccgattcgtaaaaattcaaggatgaggttgatg 10267846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 271
Target Start/End: Original strand, 41825570 - 41825745
Alignment:
Q  97 atcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagca-tgctaacagagcacttgga 195  Q
    ||||||||||||| || ||||||| || | || | | || | ||||| ||||||| |||||||| |  |||| |||| || | ||||||||||  |||||    
T  41825570 atcaaattagtccttgtacacgtgactgccttgttgacatgtgtacaggacaacacagcatgcaagaagacacatcatcactactaacagagcttttgga 41825669  T
Q  196 cggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaattt 271  Q
    ||||  |||| |||||||||| |||||  ||||||||||| ||| | ||||||||||| |||| | ||| ||||||    
T  41825670 cggagtgaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgaattt 41825745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 304
Target Start/End: Original strand, 42943426 - 42943505
Alignment:
Q  225 aaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttga 304  Q
    ||||||||||| ||| | ||||||||||| |||| ||||| |||||||||||||   | |||||||||||||||| ||||    
T  42943426 aaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttga 42943505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 264
Target Start/End: Original strand, 1322314 - 1322355
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgaggga 264  Q
    ||||||||||||||||| ||||||||| ||||||||||||||    
T  1322314 acaaattcagggattaaattgatattttgcataattgaggga 1322355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 9673189 - 9673266
Alignment:
Q  194 gacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaattt 271  Q
    |||||| ||||| |||||||||| |||||  ||||||||||||||| | |||||||| || |||| ||||| ||||||    
T  9673189 gacggagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttcacaaaattcagggacgaattt 9673266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 302
Target Start/End: Original strand, 8655987 - 8656064
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagtt 302  Q
    |||||||| |||||||| ||||||||||||||| ||||  || ||||||| |||| ||||||| ||||| ||| ||||||    
T  8655987 acaaattctgggattaaattgatatttcgcatagttga--gacgaatttgaccgacccgtaaatattcagggatgaagtt 8656064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 9876562 - 9876630
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattca 291  Q
    ||||||||||| ||||| ||||||||| |||||||| ||||||||| ||  |||||| || ||||||||    
T  9876562 acaaattcaggtattaaattgatattttgcataattaagggatgaagttaaccgatcagtgaaaattca 9876630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 304
Target Start/End: Original strand, 601704 - 601783
Alignment:
Q  225 aaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttga 304  Q
    ||||||||||| ||| ||||||||||| | |||| ||||| ||| |||||||||   | |||||||||||||||| ||||    
T  601704 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 601783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 296
Target Start/End: Original strand, 15308261 - 15308332
Alignment:
Q  225 aaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggac 296  Q
    ||||||||||| ||| ||||||||||| |||||| ||||| ||| |||||||||   | |||||||||||||    
T  15308261 aaattcagggactaatttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggac 15308332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 296
Target Start/End: Original strand, 15488630 - 15488701
Alignment:
Q  225 aaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggac 296  Q
    ||||||||||| ||| ||||||||||| |||||| ||||| ||| |||||||||   | |||||||||||||    
T  15488630 aaattcagggactaatttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggac 15488701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 304
Target Start/End: Original strand, 27692837 - 27692916
Alignment:
Q  225 aaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttga 304  Q
    ||||||||||| ||| ||||||||| ||| |||| ||||| ||| |||||||||   | |||||||||||||||| ||||    
T  27692837 aaattcagggactaatttgatattttgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 27692916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 304
Target Start/End: Original strand, 29239187 - 29239266
Alignment:
Q  225 aaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttga 304  Q
    ||||||||||| ||| ||||||||||| | |||| ||||| ||| |||||||||   | |||||||||||||||| ||||    
T  29239187 aaattcagggactaatttgatatttcgaaaaatttagggacgaaattggccgatttttcaaaattcaaggacgaatttga 29239266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 304
Target Start/End: Original strand, 33762713 - 33762792
Alignment:
Q  225 aaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttga 304  Q
    ||||||||||| ||| ||||||||||| | |||| ||||| ||| |||||||||   | |||||||||||||||| ||||    
T  33762713 aaattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 33762792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 311
Target Start/End: Complemental strand, 5075485 - 5075371
Alignment:
Q  197 ggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggac 296  Q
    ||||| ||| |||||||||| ||  || ||||||| |||  || ||||||||||||| ||||  |||| || |||||| ||| | |  ||||||||||||    
T  5075485 ggaagaaccattttgatggacgtgagagaaattcaaggacaaaattgatatttcgcaaaatttggggacgattttggctgatgcttgcaaattcaaggac 5075386  T
Q  297 gaagttgatggttca 311  Q
    |||||||||| ||||    
T  5075385 gaagttgatgattca 5075371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 311
Target Start/End: Complemental strand, 11031522 - 11031432
Alignment:
Q  221 tgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||| ||||| | ||| |||||||||||||||||||  | | || ||||||| |||| || ||||||||||| | |||||||| ||||    
T  11031522 tgacaaactcaggaactaatttgatatttcgcataattggagaacgattttggcccatccttacaaattcaaggatggagttgatgattca 11031432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 305
Target Start/End: Original strand, 23811565 - 23811647
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgat 305  Q
    ||||||||| ||| ||  ||||||||| | | ||||| |||| |||||||||||||||||   |||||| |||||||||||||    
T  23811565 acaaattcaaggactattttgatattttgtaaaattgggggacgaatttggccgatccgtgcgaattcagggacgaagttgat 23811647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 311
Target Start/End: Original strand, 40020654 - 40020756
Alignment:
Q  209 ttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggt 308  Q
    |||||||| |||  ||||||||||||| ||  |||||||||||   ||||  |||| ||||||||| || || |||| ||||| ||||||| ||||||||    
T  40020654 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggcagacccctaaagattcagggacgaaattgatggt 40020753  T
Q  309 tca 311  Q
    |||    
T  40020754 tca 40020756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 297
Target Start/End: Original strand, 41042605 - 41042711
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    ||||||||| ||||| |||||||||| | |||  ||||||||||| ||| | |||||||| || |||| |||||  ||||||||| ||   | |||||||    
T  41042605 ttggacggagggaccattttgatggacgcctgtaaaattcagggactaaatagatatttcacaaaattcagggacaaatttggccaattttttaaaattc 41042704  T
Q  291 aaggacg 297  Q
    |||||||    
T  41042705 aaggacg 41042711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 304
Target Start/End: Original strand, 7745133 - 7745246
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    ||||| ||| ||||| ||||||||||||||||  |||| |||||| ||| |  |||||||||| |||| || || ||||||||| |||   | |||||||    
T  7745133 ttggatggagggaccattttgatggatgtctgtaaaatacagggactaaataaatatttcgcaaaattcagagacgaatttggctgatttttgaaaattc 7745232  T
Q  291 aaggacgaagttga 304  Q
    || |||||| ||||    
T  7745233 aaagacgaatttga 7745246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 304
Target Start/End: Original strand, 34681084 - 34681145
Alignment:
Q  243 gatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttga 304  Q
    ||||||||||| |||| ||||| |||||||||||||   | |||||||||||||||| ||||    
T  34681084 gatatttcgcaaaattcagggacgaatttggccgatttttgaaaattcaaggacgaatttga 34681145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 304
Target Start/End: Complemental strand, 42941897 - 42941784
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    ||||||||| ||||  ||||||||||  ||||  ||||||||||| ||| |  ||||||| || |||| ||||| ||||||||| |||   | |||||||    
T  42941897 ttggacggagggactattttgatggacatctgtaaaattcagggactaaataaatatttctcaaaattcagggacgaatttggctgattttttaaaattc 42941798  T
Q  291 aaggacgaagttga 304  Q
    ||||||||| ||||    
T  42941797 aaggacgaatttga 42941784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 305
Target Start/End: Complemental strand, 25705388 - 25705308
Alignment:
Q  225 aaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgat 305  Q
    ||||||| | ||||| ||| |||||| |||||||||| || |  |||| ||||| ||| |||||||||||||||| |||||    
T  25705388 aaattcaagaattaaattgttatttcccataattgagagacgtttttgaccgatacgtgaaaattcaaggacgaacttgat 25705308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 178; Significance: 5e-96; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 79 - 311
Target Start/End: Original strand, 44558381 - 44558614
Alignment:
Q  79 tgaactttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg 178  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||| |||| |||||||||||||||||||| ||||||||||| |||| |||||||||    
T  44558381 tgaactttttcaaattcaatcaaatgagtccttgaacacgtggcttccttcttgccacgcgtacaagacaacagagcatgcatggtgacagatcagcatg 44558480  T
Q  179 -ctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccga 277  Q
     |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  44558481 gctaacatagcacttggacggaaggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttggccga 44558580  T
Q  278 tccgtaaaaattcaaggacgaagttgatggttca 311  Q
     |||| ||||||||||||||||||||||||||||    
T  44558581 cccgtgaaaattcaaggacgaagttgatggttca 44558614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 87 - 304
Target Start/End: Complemental strand, 27625034 - 27624816
Alignment:
Q  87 ttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-ctaacag 185  Q
    ||||||||||||||||||||||| ||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||| |||| |||| |||||||    
T  27625034 ttcaaattcaatcaaattagtccttgaacacgtggcttccttcttgccacacgtacaagacaacaaagcatgcatggcgacagatcaacatggctaacag 27624935  T
Q  186 agcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaa 285  Q
    ||||||| ||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||  |||||||||| || | |||||||    
T  27624934 agcactttgacggaatgacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgaaagatgaatttgaccaacccgtaaa 27624835  T
Q  286 aattcaaggacgaagttga 304  Q
    ||||||||| |||||||||    
T  27624834 aattcaagggcgaagttga 27624816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 83 - 311
Target Start/End: Complemental strand, 35996295 - 35996066
Alignment:
Q  83 ctttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-cta 181  Q
    ||||||| ||||||||||||||||||| ||||||||||||||| |||| |||||| ||||||||||||| | ||||||||||||||| |||||||| |||    
T  35996295 ctttttccaattcaatcaaattagtccttgaacacgtggcttccttcttgccacgtgtacaagacaacacaacatgcatggcgacatgtcagcatggcta 35996196  T
Q  182 acagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccg 281  Q
    || ||||||||||||||| |||||||||||||||| |||||| ||||||||||||||| ||||||||| ||| |||||||||| ||||||| |||| ||     
T  35996195 acggagcacttggacggagggacctttttgatggacgtctgataaattcagggattaaattgatattttgcacaattgagggacgaatttgaccgaccca 35996096  T
Q  282 taaaaattcaaggacgaagttgatggttca 311  Q
    ||||||| ||  ||| || |||||||||||    
T  35996095 taaaaatccagagactaaattgatggttca 35996066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 82 - 311
Target Start/End: Original strand, 51041822 - 51042051
Alignment:
Q  82 actttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-ct 180  Q
    |||||||| ||||||||||||||||||| |||||| |||||||| |||| |||||| ||| ||||||||| | |||||| ||||||| ||||||||| ||    
T  51041822 actttttccaattcaatcaaattagtccttgaacatgtggcttccttcttgccacgtgtataagacaacacaacatgcagggcgacagatcagcatggct 51041921  T
Q  181 aacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatcc 280  Q
    |||| |||||||||| ||| |||||||||||||| | |||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| |||| |     
T  51041922 aacaaagcacttggatggagggacctttttgatg-acgtctgacaaattcatggactaagttgatatttcacataattgagggatgaatttgaccgacct 51042020  T
Q  281 gtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||| ||||||||| |||| ||||||    
T  51042021 gtaaaaatttaaggacgaatttgacggttca 51042051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 79 - 311
Target Start/End: Original strand, 44794648 - 44794881
Alignment:
Q  79 tgaactttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg 178  Q
    ||||||||||| || ||||||||||| |||||||||||||||||||| |||| ||||||||||||||||| || |||||||| |||||||| ||||||||    
T  44794648 tgaactttttccaaatcaatcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaagacatcacagcatgcaaggcgacatgtcagcatg 44794747  T
Q  179 -ctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccga 277  Q
     ||||| |||| | |  ||||| |||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||| ||||||| ||||    
T  44794748 gctaacggagcccgttaacggagggacctttttgatggacgtctgataaattcagggattaaattgatatttcgcataattgagggacgaatttgaccga 44794847  T
Q  278 tccgtaaaaattcaaggacgaagttgatggttca 311  Q
       || |||||||| |||| || |||||||||||    
T  44794848 cgtgtgaaaattcagggactaaattgatggttca 44794881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 79 - 311
Target Start/End: Complemental strand, 47942047 - 47941814
Alignment:
Q  79 tgaactttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg 178  Q
    ||||||||||| || ||||||||||| |||| ||||||||||||||| |||| ||||||||||||||||| || | |||||| |||||||| ||||||||    
T  47942047 tgaactttttccaaatcaatcaaattcgtccttgaacacgtggcttccttcttgccacgcgtacaagacagcacaacatgcaaggcgacatgtcagcatg 47941948  T
Q  179 -ctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccga 277  Q
     ||||| |||| | |  ||||| |||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||| || ||||||| ||||    
T  47941947 gctaacggagcccgttaacggagggacctttttgatggacgtctgataaattcagggattaaattgatatttcgcataattgagagacgaatttgaccga 47941848  T
Q  278 tccgtaaaaattcaaggacgaagttgatggttca 311  Q
     ||||||||||||| |||| || |||||||||||    
T  47941847 cccgtaaaaattcagggactaaattgatggttca 47941814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 96 - 311
Target Start/End: Original strand, 10372611 - 10372827
Alignment:
Q  96 aatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-ctaacagagcacttgg 194  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||| || |||||||| |||||||| |||||||| ||||| |||  | |      
T  10372611 aatcaaattcgtccctgaacacgtggcttctttcttgccacgcgtacaagacagcacagcatgcaaggcgacatgtcagcatggctaacggagtccgtta 10372710  T
Q  195 acggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaagg 294  Q
    ||||| |||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||  |||||||||||  ||| |||||||| ||    
T  10372711 acggagggacctttttgatggacgtctgacaaattcagggatgaaattgatatttcgcataattgagggactaatttggccgacgcgtgaaaattcaggg 10372810  T
Q  295 acgaagttgatggttca 311  Q
    ||||| |||||||||||    
T  10372811 acgaatttgatggttca 10372827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 79 - 311
Target Start/End: Original strand, 2350392 - 2350628
Alignment:
Q  79 tgaactttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaaga---caacaaagcatgcatggcgacatatcagc 175  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||| |||| |||||| ||||||||   ||||| ||||||||  ||||||| |||||    
T  2350392 tgaactttttccaattcaatcaaattagtccttgaacacgtggcttccttcttgccacgtgtacaagagtacaacacagcatgcagagcgacatgtcagc 2350491  T
Q  176 atg-ctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggc 274  Q
    ||| ||||| |||||||||||| || |||||||||||||| | |||||| |||||||| |||||| ||||||||||||||||||||||||  ||||||||    
T  2350492 atggctaacggagcacttggacagagggacctttttgatgaacgtctgataaattcagagattaaattgatatttcgcataattgagggacaaatttggc 2350591  T
Q  275 cgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||| || | |||||||| |||| || |||||||||||    
T  2350592 cgacccatgaaaattcagggactaaattgatggttca 2350628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 79 - 311
Target Start/End: Complemental strand, 10762817 - 10762584
Alignment:
Q  79 tgaactttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg 178  Q
    ||||||||||| || ||||||||||| |||||||||||||||||||| |||| |||||||||||| |||| || |||||||  |||||||| ||||||||    
T  10762817 tgaactttttccaaatcaatcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaggacagcacagcatgccaggcgacatgtcagcatg 10762718  T
Q  179 -ctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccga 277  Q
     ||||| |||| | |  ||||| |||||||||||||||| ||||||||||||||||||| || |||| |||||||||||||||||||  |||||||||||    
T  10762717 gctaacggagcccgttaacggagggacctttttgatggacgtctgacaaattcagggatgaaattgaaatttcgcataattgagggactaatttggccga 10762618  T
Q  278 tccgtaaaaattcaaggacgaagttgatggttca 311  Q
      ||| |||||||| ||||||| |||||||||||    
T  10762617 cgcgtgaaaattcagggacgaatttgatggttca 10762584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 91 - 311
Target Start/End: Complemental strand, 2827628 - 2827410
Alignment:
Q  91 aattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-ctaacagagca 189  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| | |||||| | ||||| ||||||| | ||||| ||| |    
T  2827628 aattcaatcaaattagtccctgaacacgtggcttccttcttgccacgcgtacaagacaacacatcatgcaagacgacagatcagcaaggctaacggagga 2827529  T
Q  190 cttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaatt 289  Q
    |||||||||| |||||||||||||||| |||||||||||||| ||| |||||||||||||| ||||||||||||| |   ||||||||   || ||||||    
T  2827528 cttggacggagggacctttttgatggacgtctgacaaattcaaggactaagttgatatttcacataattgagggacg---ttggccgacgtgtgaaaatt 2827432  T
Q  290 caaggacgaagttgatggttca 311  Q
     | ||||||| |||||||||||    
T  2827431 tagggacgaatttgatggttca 2827410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 97 - 311
Target Start/End: Complemental strand, 4519594 - 4519379
Alignment:
Q  97 atcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-ctaacagagcacttgga 195  Q
    ||||||||||||| |||||||||| |||  || | |||||| ||||||||||||| |||||||| ||||||| ||||||||| ||||| ||||| |||||    
T  4519594 atcaaattagtccttgaacacgtgactttctttttgccacgtgtacaagacaacacagcatgcagggcgacagatcagcatggctaacggagcatttgga 4519495  T
Q  196 cggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaagga 295  Q
    |||| |||||||||||||| |||||| |||||||||  |  |||| |||||||||||||||||||||||||||||||||| | | |||||||||||||||    
T  4519494 cggagggacctttttgatgaatgtctaacaaattcaaaggctaagctgatatttcgcataattgagggatgaatttggccaaccggtaaaaattcaagga 4519395  T
Q  296 cgaagttgatggttca 311  Q
    |||| ||||| |||||    
T  4519394 cgaatttgattgttca 4519379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 39923007 - 39923095
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||| |||||||| | ||||||||||| ||||||| |||||||||||    
T  39923007 acaaattcagggattaaattgatatttcgcataattgagggacgaagttggccgacctgtaaaaattcagggacgaaattgatggttca 39923095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 42879366 - 42879278
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||| ||||||| |||||||||||||||||||||||| ||| |||||||| ||||||||||||| |||||||||||||| ||||    
T  42879366 acaaattcatggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcagggacgaagttgatgattca 42879278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 43778480 - 43778392
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||| ||||||||| |||||||||||||||||||||||| ||| ||| |||| |||||||||||||||||||||||||||| ||||    
T  43778480 acaaatttagggattaaattgatatttcgcataattgagggacgaagttgaccgacccgtaaaaattcaaggacgaagttgatgattca 43778392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 44992899 - 44992811
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||| ||||||||||| |||||||||||||||||||||||| ||| |||||||| ||||||||||||| |||||||||||||| ||||    
T  44992899 acaaactcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcagggacgaagttgatgattca 44992811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 4520451 - 4520539
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||| | | |||||||||||||||||||||||| ||||||||||||||||  | ||||||||||||||||||||||||| ||||    
T  4520451 acaaattcaagaactaagttgatatttcgcataattgatggatgaatttggccgactcataaaaattcaaggacgaagttgatgattca 4520539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 39085152 - 39085240
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||| ||||||| |||||||||||||||||||||||| ||| ||| |||| ||||||||||||| |||||||||||||| ||||    
T  39085152 acaaattcatggattaaattgatatttcgcataattgagggacgaagttgaccgacccgtaaaaattcagggacgaagttgatgattca 39085240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 44793025 - 44792942
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatg 306  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||| | |||||| |||| |||||||||    
T  44793025 acaaattcagggattaaattgatatttcgcataattgagggacgaatttggccgacccgtgataattcagggactaagttgatg 44792942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 2828411 - 2828499
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||| ||||||| ||||||||||||||||||||||||  || |||||||| || |||||||||| |||||||||||||| ||||    
T  2828411 acaaattcaaggattaaattgatatttcgcataattgagggacaaagttggccgacccataaaaattcagggacgaagttgatgattca 2828499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 223 - 292
Target Start/End: Complemental strand, 51040826 - 51040757
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaa 292  Q
    ||||||||||||||| | |||||||||||||||||||| |||||||||||||||| |||| |||||||||    
T  51040826 acaaattcagggattgaattgatatttcgcataattgaaggatgaatttggccgacccgtgaaaattcaa 51040757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 10371148 - 10371060
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    |||||||||||||| || ||||||||||||||||||||||||  ||||| |||||  ||| |||||||| |||| ||||||||||||||    
T  10371148 acaaattcagggatgaaattgatatttcgcataattgagggactaatttagccgacgcgtgaaaattcagggactaagttgatggttca 10371060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 35997767 - 35997855
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||||||||||| ||||||||||  |||||||||| | |||||||||||| |||| |||||||| |||| ||||||||| ||||    
T  35997767 acaaattcagggattaaattgatatttcttataattgaggaacgaatttggccgacccgtgaaaattcagggacaaagttgatgattca 35997855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 191 - 304
Target Start/End: Original strand, 41761747 - 41761860
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    ||||||||| ||||| |||||||||| |||||  ||||||||||| ||| | ||||||||||| ||||  |||| |||||||||||||   | |||||||    
T  41761747 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaatttcgggacgaatttggccgatttttgaaaattc 41761846  T
Q  291 aaggacgaagttga 304  Q
    ||||||||| ||||    
T  41761847 aaggacgaatttga 41761860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 5486052 - 5486140
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||||||| ||  |||||||||||   |||| |||||||||||||||||| || |||||||||| ||||||| |||||||||||    
T  5486052 acaaattcagggactattttgatatttcgttaaatttagggatgaatttggccgacccctaaaaattcagggacgaaattgatggttca 5486140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 47942746 - 47942834
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||| ||||||| |||||||||||||||||||||||| ||||||| |||| |||| | |||||| | || ||||||||| ||||    
T  47942746 acaaattcaaggattaaattgatatttcgcataattgagggacgaatttgaccgacccgtgataattcatgaactaagttgatgattca 47942834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 224 - 311
Target Start/End: Complemental strand, 230526 - 230439
Alignment:
Q  224 caaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||| || ||| |||||||||||||||||||||||| || |||||||||||| || ||| |||||||  ||||||||| ||||    
T  230526 caaattcagagactaatttgatatttcgcataattgagggacgattttggccgatccttacaaactcaaggataaagttgatgattca 230439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 305
Target Start/End: Complemental strand, 44556711 - 44556629
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgat 305  Q
    ||||||||| ||| ||| |||||||||| |||||||||||||  |||||| |||| ||||||||||||| |||| ||||||||    
T  44556711 acaaattcatggactaaattgatatttcacataattgagggactaatttgaccgacccgtaaaaattcagggacaaagttgat 44556629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 304
Target Start/End: Complemental strand, 51012143 - 51011936
Alignment:
Q  97 atcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagca-tgctaacagagcacttgga 195  Q
    ||||| ||||||| || |||||||||| | || | | |||| ||||||||||||| | |||||| || ||||  ||| || | ||||||||||  |||||    
T  51012143 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacatcatgcaagg-gacacgtcatcactactaacagagcttttgga 51012045  T
Q  196 cggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaagga 295  Q
    |||| ||||| |||||||||| |||||  |||||||| || ||| | ||||||||||| |||| | | | ||||||| |||||   | ||||||||||||    
T  51012044 cggagggaccattttgatggacgtctgtaaaattcagagactaaatagatatttcgcaaaattcaagaaagaatttgaccgattttttaaaattcaagga 51011945  T
Q  296 cgaagttga 304  Q
    |||| ||||    
T  51011944 cgaatttga 51011936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 209 - 311
Target Start/End: Complemental strand, 5484645 - 5484543
Alignment:
Q  209 ttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggt 308  Q
    |||||||| |||  ||||||||||||| ||  |||||||||||   ||||  |||| |||||||||||| || |||||||||| ||||||| ||||||||    
T  5484645 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccgacccctaaaaattcatggacgaaattgatggt 5484546  T
Q  309 tca 311  Q
    |||    
T  5484545 tca 5484543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 209 - 311
Target Start/End: Complemental strand, 39083744 - 39083642
Alignment:
Q  209 ttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggt 308  Q
    |||||||| |||  ||||||||||||| ||  |||||||||||   |||| ||||| |||||||||||| || | |||||||| ||||||| ||||||||    
T  39083744 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggccgacccctgaaaattcagggacgaaattgatggt 39083645  T
Q  309 tca 311  Q
    |||    
T  39083644 tca 39083642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 304
Target Start/End: Complemental strand, 43519547 - 43519434
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    ||||||||| ||||   ||||||||| || ||  ||||||||||| ||| ||||||||||||| |||| ||||| ||| |||||||||   | |||||||    
T  43519547 ttggacggagggacggatttgatggacgtttgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattc 43519448  T
Q  291 aaggacgaagttga 304  Q
    ||||||||| ||||    
T  43519447 aaggacgaatttga 43519434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 10767950 - 10768038
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    |||||||||||||| ||  ||| |||||||||||||||||||  |||||||||||  ||| |||||||| | || || |||||||||||    
T  10767950 acaaattcagggatgaaaatgaaatttcgcataattgagggactaatttggccgacgcgtgaaaattcaggaactaacttgatggttca 10768038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 304
Target Start/End: Original strand, 4173740 - 4173819
Alignment:
Q  225 aaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttga 304  Q
    ||||||||||| ||| ||||||||||||| |||| ||||| ||| |||||||||   | |||||||||||||||| ||||    
T  4173740 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 4173819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 278
Target Start/End: Original strand, 35404446 - 35404533
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgat 278  Q
    ||||||||| ||||| ||||| |||| |||||  ||||||||||||||| |  |||||||||| |||||| ||| |||||| ||||||    
T  35404446 ttggacggatggaccattttgttggacgtctgtaaaattcagggattaaataaatatttcgcaaaattgaaggacgaatttagccgat 35404533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 304
Target Start/End: Complemental strand, 43507256 - 43507177
Alignment:
Q  225 aaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttga 304  Q
    ||||||||||| ||| ||||||||||||| |||| ||||| ||| |||||||||   | |||||||||||||||| ||||    
T  43507256 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 43507177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 304
Target Start/End: Original strand, 43508653 - 43508732
Alignment:
Q  225 aaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttga 304  Q
    ||||||||||| ||| ||||||||||||| |||| ||||| ||| |||||||||   | |||||||||||||||| ||||    
T  43508653 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 43508732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 274
Target Start/End: Original strand, 13450970 - 13451064
Alignment:
Q  180 taacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggc 274  Q
    |||||||||| ||||| ||| ||||| |||||||||| |||||| ||||||| ||| ||  |||||||||||   ||||| |||| |||||||||    
T  13450970 taacagagcatttggatggagggaccattttgatggacgtctgataaattcaaggactattttgatatttcgttaaattgggggacgaatttggc 13451064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 311
Target Start/End: Complemental strand, 39189487 - 39189385
Alignment:
Q  209 ttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggt 308  Q
    |||||||| |||  ||||||||||||| ||  |||||||||||   ||||  |||| |||||||||||| || | |||||||| ||||||| ||||||||    
T  39189487 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccgacccctgaaaattcagggacgaaattgatggt 39189388  T
Q  309 tca 311  Q
    |||    
T  39189387 tca 39189385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 311
Target Start/End: Complemental strand, 39921599 - 39921497
Alignment:
Q  209 ttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggt 308  Q
    |||||||| |||  ||||||||||||| ||  |||||||||||   ||||  |||| |||||||||||| || | |||||||| ||||||| ||||||||    
T  39921599 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccgacccctgaaaattcagggacgaaattgatggt 39921500  T
Q  309 tca 311  Q
    |||    
T  39921499 tca 39921497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 264
Target Start/End: Original strand, 39190819 - 39190860
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgaggga 264  Q
    ||||||||| ||||||| ||||||||||||||||||||||||    
T  39190819 acaaattcacggattaaattgatatttcgcataattgaggga 39190860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 304
Target Start/End: Complemental strand, 49523247 - 49523134
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    ||||||||| ||||| |||||||| | |||||  ||||||||||| ||| | ||||||||||| |||| | ||| |||||| ||||||   | |||||||    
T  49523247 ttggacggagggaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcatggacgaatttagccgattttttaaaattc 49523148  T
Q  291 aaggacgaagttga 304  Q
    || |||||| ||||    
T  49523147 aatgacgaatttga 49523134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 258
Target Start/End: Original strand, 27626728 - 27626763
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataatt 258  Q
    ||||||||||||||||| ||||||||||||||||||    
T  27626728 acaaattcagggattaaattgatatttcgcataatt 27626763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 304
Target Start/End: Complemental strand, 39345653 - 39345574
Alignment:
Q  225 aaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttga 304  Q
    ||||||||||| ||| | | ||||||||| |||| ||||| |||||||||||||   | |||||||||||||||| ||||    
T  39345653 aaattcagggactaaatagctatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttga 39345574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 278
Target Start/End: Complemental strand, 41781662 - 41781575
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgat 278  Q
    ||||||||| ||||| ||||||||||||||||  ||||||||||| ||| |  |||||| ||| |||| |||||  |||||| |||||    
T  41781662 ttggacggagggaccattttgatggatgtctgtaaaattcagggactaaataaatattttgcaaaattcagggacaaatttgaccgat 41781575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 311
Target Start/End: Original strand, 42880774 - 42880876
Alignment:
Q  209 ttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggt 308  Q
    |||||||| |||  ||||||||||||| ||  |||||||||||   ||||  |||| |||||||||||| || | |||||||| |||| || ||||||||    
T  42880774 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccgacccctgaaaattcagggacaaaattgatggt 42880873  T
Q  309 tca 311  Q
    |||    
T  42880874 tca 42880876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 311
Target Start/End: Original strand, 43779886 - 43779988
Alignment:
Q  209 ttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggt 308  Q
    |||||||| |||  ||||||||||||| ||  |||||||||||   ||||  |||| |||||||||||| || | |||||||| ||||||| |||| |||    
T  43779886 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccgacccctgaaaattcagggacgaaattgaaggt 43779985  T
Q  309 tca 311  Q
    |||    
T  43779986 tca 43779988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 252
Target Start/End: Original strand, 48646748 - 48646809
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgc 252  Q
    ||||||||||||||| |||||||| | |||||  ||||||||||| ||| | ||||||||||    
T  48646748 ttggacggaaggaccattttgatgaaggtctgtaaaattcagggactaaatagatatttcgc 48646809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 304
Target Start/End: Original strand, 320903 - 320979
Alignment:
Q  228 ttcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttga 304  Q
    |||| ||| ||| ||||||||||||| |||| | ||||||| |||||||||   | |||||||||||||||| ||||    
T  320903 ttcaaggactaatttgatatttcgcaaaattcaaggatgaaattggccgatttttcaaaattcaaggacgaatttga 320979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 311
Target Start/End: Original strand, 6999332 - 6999388
Alignment:
Q  255 aattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    |||||| ||| ||||||||||||| |||  ||||||||||||||| |||||| ||||    
T  6999332 aattgaaggacgaatttggccgattcgtgcaaattcaaggacgaaattgatgattca 6999388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 25995112 - 25995200
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||||| | ||  |||||||||||   ||||| ||||| |||||||||||| |||  ||||| | |||||||||||||| ||||    
T  25995112 acaaattcaggaactattttgatatttcgttaaattgggggataaatttggccgattcgtgcaaatttatggacgaagttgatgattca 25995200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 309
Target Start/End: Complemental strand, 32652204 - 32652104
Alignment:
Q  209 ttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggt 308  Q
    |||||||| |||  ||||||||| ||| ||  |||||||||||   ||||| |||| |||||||||||| || | ||||||||  |||||| ||||||||    
T  32652204 ttgatggacgtcaaacaaattcaaggactattttgatatttcgttaaattgggggacgaatttggccgaaccctgaaaattcagtgacgaaattgatggt 32652105  T
Q  309 t 309  Q
    |    
T  32652104 t 32652104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 159; Significance: 1e-84; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 78 - 311
Target Start/End: Original strand, 46812469 - 46812703
Alignment:
Q  78 ttgaactttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcat 177  Q
    |||||| |||||||||||||||||| |||||| ||||||||||||||| |||| ||||| |||||||||||||| |||||||| ||||||||||||||||    
T  46812469 ttgaaccttttcaaattcaatcaaagtagtccttgaacacgtggcttccttcttgccacacgtacaagacaacacagcatgcagggcgacatatcagcat 46812568  T
Q  178 g-ctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccg 276  Q
    | |||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||| ||| |||||||||| | |||||||||||||||||||||||    
T  46812569 ggctaacagagcacttggacggaatgacctttttgatggacgtctgacaaatttagggactaaattgatatttcacgtaattgagggatgaatttggccg 46812668  T
Q  277 atccgtaaaaattcaaggacgaagttgatggttca 311  Q
    |  ||||||||||||||||||||||||||||||||    
T  46812669 actcgtaaaaattcaaggacgaagttgatggttca 46812703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 85 - 311
Target Start/End: Original strand, 46996596 - 46996823
Alignment:
Q  85 ttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcat-gctaac 183  Q
    ||||| |||||||||||||| |||| ||||||||||||||| |||| |||||||||||||||||||| |||||||| ||||||| |||||||| ||||||    
T  46996596 ttttccaattcaatcaaattcgtccttgaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaaggcgacagatcagcatcgctaac 46996695  T
Q  184 agagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgta 283  Q
     ||||||||||||||| |||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||| ||| ||||||||  |||     
T  46996696 ggagcacttggacggagggacctttttgatggacgtctgacaaattcagtgactaagttgatatttcgcataattgagggacgaagttggccgacgcgtg 46996795  T
Q  284 aaaattcaaggacgaagttgatggttca 311  Q
    |||||||| ||||||| |||||||||||    
T  46996796 aaaattcagggacgaatttgatggttca 46996823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 82 - 311
Target Start/End: Original strand, 47341573 - 47341807
Alignment:
Q  82 actttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatg----gcgacatatcagcat 177  Q
    |||||||| ||||||||||||||||||| ||||||||||||||| |||| |||||| ||||||||||||| ||||||||||    ||||||| ||  |||    
T  47341573 actttttccaattcaatcaaattagtccttgaacacgtggcttccttcttgccacgtgtacaagacaacacagcatgcatgcagggcgacatgtccccat 47341672  T
Q  178 g-ctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccg 276  Q
    | ||||| |||||||||||||||   |||||||||||  | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  47341673 ggctaacggagcacttggacggagatacctttttgattaacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttggccg 47341772  T
Q  277 atccgtaaaaattcaaggacgaagttgatggttca 311  Q
    | |||| |||||||||||||||| |||||||||||    
T  47341773 acccgtgaaaattcaaggacgaatttgatggttca 47341807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 97 - 311
Target Start/End: Complemental strand, 23954023 - 23953808
Alignment:
Q  97 atcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-ctaacagagcacttgga 195  Q
    |||||||||||||  |||||||||||||| || | |||||| ||||||||||||| | |||||||||||||||||||||||| ||||| |||||||||||    
T  23954023 atcaaattagtcctggaacacgtggcttcctttttgccacgtgtacaagacaacacaacatgcatggcgacatatcagcatggctaacggagcacttgga 23953924  T
Q  196 cggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaagga 295  Q
    |||| ||||||||||||| || |||||||||||||| ||| |||||||||||||||||||||||| ||| ||||||  |||| ||||||||||| |||||    
T  23953923 cggagggacctttttgattgacgtctgacaaattcacggactaagttgatatttcgcataattgatggacgaattttaccgacccgtaaaaatttaagga 23953824  T
Q  296 cgaagttgatggttca 311  Q
    |||| |||||||||||    
T  23953823 cgaatttgatggttca 23953808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 85 - 311
Target Start/End: Original strand, 33038691 - 33038918
Alignment:
Q  85 ttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatgc-taac 183  Q
    ||||| ||||||||||||| ||||| ||||||| ||||||| |||| | |||| ||| ||||||||| | |||||| | ||||| |||| ||||| ||||    
T  33038691 ttttccaattcaatcaaatcagtccttgaacacatggcttccttcttgacacgtgtataagacaacacaacatgcaggacgacagatcaacatgcctaac 33038790  T
Q  184 agagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgta 283  Q
    |||||||||||||||| |||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||| || ||    
T  33038791 agagcacttggacggagggacctttttgatggacgtctgaaaaattcagggactaagttgatatttcgcataattgagggatgaatttgaccgacccata 33038890  T
Q  284 aaaattcaaggacgaagttgatggttca 311  Q
    |||||||||||||||| |||||| ||||    
T  33038891 aaaattcaaggacgaatttgatgattca 33038918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 79 - 311
Target Start/End: Original strand, 8423169 - 8423402
Alignment:
Q  79 tgaactttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg 178  Q
    ||||||||||| || ||||||||||| |||||||||||||||||||| |||| ||||||||||||||||| || |||||||| |||||||| ||||||||    
T  8423169 tgaactttttccaaatcaatcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaagacagcacagcatgcaaggcgacatgtcagcatg 8423268  T
Q  179 -ctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccga 277  Q
     ||||| |||| | |  ||||| ||||||||||||| || |||||| ||||||||||||||| ||||||||||||||||||||||||  |||||||| ||    
T  8423269 gctaacggagcccgttaacggagggacctttttgattgacgtctgataaattcagggattaaattgatatttcgcataattgagggacaaatttggctga 8423368  T
Q  278 tccgtaaaaattcaaggacgaagttgatggttca 311  Q
     |||| |||||||| |||| || |||||||||||    
T  8423369 cccgtgaaaattcagggactaaattgatggttca 8423402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 85 - 311
Target Start/End: Complemental strand, 40784576 - 40784349
Alignment:
Q  85 ttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatgct-aac 183  Q
    ||||| ||||||||||||||||||| |||||| |||||||| |||| |||||| ||| ||||||||| | |||||| | ||||| ||||||||| | |||    
T  40784576 ttttccaattcaatcaaattagtccttgaacatgtggcttccttcttgccacgtgtataagacaacacaacatgcaggacgacagatcagcatgattaac 40784477  T
Q  184 agagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgta 283  Q
    || ||| ||||||||| |||||||||||||||||||||||||||||||  || |||||||||||||||||||||||| |||||||||| || ||  ||||    
T  40784476 agcgcatttggacggagggacctttttgatggatgtctgacaaattcaaagactaagttgatatttcgcataattgaaggatgaatttagctgacgcgta 40784377  T
Q  284 aaaattcaaggacgaagttgatggttca 311  Q
    |||||||||| ||||| |||||||||||    
T  40784376 aaaattcaagaacgaatttgatggttca 40784349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 79 - 311
Target Start/End: Original strand, 35344178 - 35344411
Alignment:
Q  79 tgaactttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg 178  Q
    ||||||||||| || ||||||||||| |||||||||||||||||||| |||| ||||||||||||||||| || |||||||| ||| |||| ||||||||    
T  35344178 tgaactttttccaaatcaatcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaagacagcacagcatgcaaggcaacatgtcagcatg 35344277  T
Q  179 -ctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccga 277  Q
     ||||| |||| | |  ||||| |||||||||||||||| |||| | ||||||||||||||| |||||||||||||||||||||||| ||||||||| ||    
T  35344278 gctaacggagcccgttaacggagggacctttttgatggacgtcttataaattcagggattaaattgatatttcgcataattgagggacgaatttggctga 35344377  T
Q  278 tccgtaaaaattcaaggacgaagttgatggttca 311  Q
     |||| |||||||  |||| || |||||||||||    
T  35344378 cccgtgaaaattcggggactaaattgatggttca 35344411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 97 - 311
Target Start/End: Complemental strand, 2167697 - 2167482
Alignment:
Q  97 atcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-ctaacagagcacttgga 195  Q
    ||||||||||||| ||||| ||||||||  || | |||||| ||||||||||||| | |||||| || ||||  |||||||| ||||  |||||||||||    
T  2167697 atcaaattagtccttgaacgcgtggctttctttttgccacgtgtacaagacaacacatcatgcagggtgacacgtcagcatggctaatggagcacttgga 2167598  T
Q  196 cggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaagga 295  Q
    |||| |||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||  ||||||||||    
T  2167597 cggagggacctttttgatgggcgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttgaccgacccgtactaattcaagga 2167498  T
Q  296 cgaagttgatggttca 311  Q
    |  | |||||||||||    
T  2167497 catatttgatggttca 2167482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 97 - 311
Target Start/End: Complemental strand, 27955588 - 27955373
Alignment:
Q  97 atcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-ctaacagagcacttgga 195  Q
    |||||||| |||| ||||||| ||||||| || | |||| | ||||||||||||| | ||||||   ||||| ||||||||| ||||| |||||||||||    
T  27955588 atcaaattggtccttgaacacatggcttccttgttgccaagtgtacaagacaacacaacatgcagcacgacacatcagcatgactaacggagcacttgga 27955489  T
Q  196 cggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaagga 295  Q
    |||| |||||| ||||||||| |||||||||||||||  ||||||||||||||||| | ||||||||||||||||| || ||||||||||||||||||||    
T  27955488 cggagggacctctttgatggacgtctgacaaattcagaaattaagttgatatttcgtaaaattgagggatgaatttagctgatccgtaaaaattcaagga 27955389  T
Q  296 cgaagttgatggttca 311  Q
    |||| |||||| ||||    
T  27955388 cgaatttgatgattca 27955373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 170 - 311
Target Start/End: Original strand, 38613460 - 38613602
Alignment:
Q  170 atcagcatg-ctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaa 268  Q
    ||||||||| |||||| | ||||| |||| | |||| ||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  38613460 atcagcatggctaacataacacttagacgaatggacattttttatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaa 38613559  T
Q  269 tttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||| |||| |||||| ||||||||| |||||||||||    
T  38613560 tttggccgacccgtgaaaattgaaggacgaatttgatggttca 38613602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 97 - 309
Target Start/End: Complemental strand, 2492544 - 2492332
Alignment:
Q  97 atcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-ctaacagagcacttgga 195  Q
    ||||||||||||| |||||||||| |||| || | |||||| |||||||||| || ||||||   ||||| | |||| |||| ||||| ||||||||| |    
T  2492544 atcaaattagtccttgaacacgtgacttcctttttgccacgtgtacaagacagcagagcatgttgggcgatagatcaacatggctaacggagcacttgaa 2492445  T
Q  196 cggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaagga 295  Q
    |||| ||| |||||| ||||| || ||| ||||||| | |||||||||||||||||||||||||| |||| | |||| |||| |||||||||||| ||||    
T  2492444 cgga-ggaacttttttatggacgtttgaaaaattcaagtattaagttgatatttcgcataattgaaggataattttgaccgacccgtaaaaattcgagga 2492346  T
Q  296 cgaagttgatggtt 309  Q
    |||| |||||||||    
T  2492345 cgaatttgatggtt 2492332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 163 - 311
Target Start/End: Original strand, 38614884 - 38615032
Alignment:
Q  163 gcgacatatcagcatg-ctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgag 261  Q
    |||||| ||||||||| |||||||||||||| |||||| |||| ||||| ||||| |||||||||||||||||| |||||| ||||||||||||||||||    
T  38614884 gcgacagatcagcatggctaacagagcacttagacggagggacattttt-atggacgtctgacaaattcagggactaagttaatatttcgcataattgag 38614982  T
Q  262 ggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    |||||||||||  ||| |||| |||||| ||||||||| |||||| ||||    
T  38614983 ggatgaatttgatcgacccgtgaaaatttaaggacgaatttgatgtttca 38615032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 30108656 - 30108568
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||| |||||||| ||||||||||||| |||||||||||||| ||||    
T  30108656 acaaattcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcagggacgaagttgatgattca 30108568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 45465184 - 45465272
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||| ||| |||| |||||||||||||||||||||||||||| ||||    
T  45465184 acaaattcagggattaaattgatatttcgcataattgagggacgaagttgaccgacccgtaaaaattcaaggacgaagttgatgattca 45465272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 46810796 - 46810708
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||| |||||||| |||||||||||||| ||||    
T  46810796 acaaattcagggattaaattgatatttcgcataattgagggactaatttggccgatccgtgaaaattcagggacgaagttgatgattca 46810708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 223 - 306
Target Start/End: Original strand, 36762680 - 36762763
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatg 306  Q
    |||||||||||| |||| |||||||||| |||||||||||||  ||||||||||||||||||||||||| ||||||||||||||    
T  36762680 acaaattcaggggttaaattgatatttcacataattgagggactaatttggccgatccgtaaaaattcagggacgaagttgatg 36762763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 3690241 - 3690153
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||| ||||||| |||||||||||||||||||||| | ||| |||||||| | |||||||||||||||||||||||||| ||||    
T  3690241 acaaattcaaggattaaattgatatttcgcataattgaggaacgaagttggccgaactgtaaaaattcaaggacgaagttgatgattca 3690153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 4321129 - 4321041
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||||||||||| |||||||||||||||||| ||||| ||| |||||||| |||| |||||||| |||||||||||||| ||||    
T  4321129 acaaattcagggattaaattgatatttcgcataattaagggacgaagttggccgacccgtgaaaattcagggacgaagttgatgattca 4321041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 8421507 - 8421419
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||| | |||||| |||| ||||||||| ||||    
T  8421507 acaaattcagggattaaattgatatttcgcataattgagggacgaatttggccgacccgtgataattcagggactaagttgatgattca 8421419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 35342516 - 35342428
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||||||||||| ||||||||||||||||||||||||  ||||||||||| |||||| |||||| |||| ||||||||| ||||    
T  35342516 acaaattcagggattaaattgatatttcgcataattgagggacaaatttggccgacccgtaataattcagggactaagttgatgattca 35342428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 40785548 - 40785636
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||||||||||  |||||||||| |||||||||| ||||||||||||||| |||| |||||||||||||||| |||||| ||||    
T  40785548 acaaattcagggattagattgatatttcacataattgagagatgaatttggccgacccgtgaaaattcaaggacgaaattgatgattca 40785636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 46994751 - 46994663
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||||||||||| |||||||||||||||||||| ||| ||| |||||||| |||| |||||||| |||||||||||||| ||||    
T  46994751 acaaattcagggattaaattgatatttcgcataattgaaggacgaagttggccgacccgtgaaaattcagggacgaagttgatgattca 46994663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 33037785 - 33037701
Alignment:
Q  223 acaaattcagggattaag-ttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatg 306  Q
    |||||||||||||||||  |||||||||| ||||||||||||||||||||||||||  | |||||||||||||||||| ||||||    
T  33037785 acaaattcagggattaaaattgatatttcacataattgagggatgaatttggccgacacataaaaattcaaggacgaacttgatg 33037701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 38614792 - 38614880
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||| ||| ||| ||||||||||||| |||||||||||||||||||||| |||| || |||||||||||||||| |||||||| ||||    
T  38614792 acaaactcaaggactaagttgatattttgcataattgagggatgaatttgaccgacccataaaaattcaaggacgtagttgatgattca 38614880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 225 - 304
Target Start/End: Complemental strand, 33775497 - 33775418
Alignment:
Q  225 aaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttga 304  Q
    ||||||||||||||| |||||||||||||||||||| ||| ||| ||| |||| ||||||||||||| ||||||||||||    
T  33775497 aaattcagggattaaattgatatttcgcataattgaaggacgaagttgaccgacccgtaaaaattcagggacgaagttga 33775418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 23955285 - 23955373
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    |||||||||| |||||| |||||||||| ||||||| ||||| |||||||||| |||| ||||||||||  ||||||||||||| ||||    
T  23955285 acaaattcagagattaaattgatatttcacataattaagggacgaatttggccaatccataaaaattcagagacgaagttgatgattca 23955373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 2168834 - 2168922
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||| ||| ||| |||||||||  | ||||| |||||||||||||| ||| | |||||||||||||||||||||||||| ||||    
T  2168834 acaaattcaaggactaaattgatatttttcttaattaagggatgaatttggacgaccagtaaaaattcaaggacgaagttgatgattca 2168922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 36756883 - 36756971
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    |||||||||| |||||| |||||||||| |||||||||||||  |||||| ||||||| | |||||||| | |||||||||||| ||||    
T  36756883 acaaattcagcgattaaattgatatttcacataattgagggactaatttgaccgatccatgaaaattcaggaacgaagttgatgattca 36756971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 36766407 - 36766495
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    |||||||||| |||||| |||||||||| |||||||||||||  |||||| ||||||| | |||||||| | |||||||||||| ||||    
T  36766407 acaaattcagcgattaaattgatatttcacataattgagggactaatttgaccgatccatgaaaattcaggaacgaagttgatgattca 36766495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 47339867 - 47339784
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatg 306  Q
    |||||||||  |||||| |||||||||||||| |||||| || ||| |||||||| ||||| ||||||| ||||||||||||||    
T  47339867 acaaattcaaagattaaattgatatttcgcatcattgagagacgaagttggccgacccgtagaaattcagggacgaagttgatg 47339784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 275
Target Start/End: Original strand, 34776916 - 34777000
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggcc 275  Q
    ||||||||| ||||| |||||||||| |||||  ||||||||||| ||| | ||||||||||| |||| ||| ||||||||||||    
T  34776916 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaggaatgaatttggcc 34777000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 209 - 311
Target Start/End: Complemental strand, 45463775 - 45463673
Alignment:
Q  209 ttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggt 308  Q
    |||||||| |||  ||||||||||||| ||  |||||||||||   |||| ||||| |||||||||||| || | |||||||| ||||||| ||||||||    
T  45463775 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggccgacccctgaaaattcagggacgaaattgatggt 45463676  T
Q  309 tca 311  Q
    |||    
T  45463675 tca 45463673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 304
Target Start/End: Complemental strand, 6602458 - 6602345
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    ||||||||| ||||| |||||||||| |||||  ||||||||||| ||| | ||||||||||| |||| |||||| | ||| ||||||   | |||||||    
T  6602458 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggataagtttagccgattttttaaaattc 6602359  T
Q  291 aaggacgaagttga 304  Q
    |||| |||| ||||    
T  6602358 aaggtcgaatttga 6602345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 304
Target Start/End: Original strand, 27666066 - 27666179
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    ||||||||| ||||   ||||||||| || ||  ||||||||||| ||| ||||||||||||| |||| ||||| ||| |||||||||   | |||||||    
T  27666066 ttggacggagggacggatttgatggacgtttgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattc 27666165  T
Q  291 aaggacgaagttga 304  Q
    ||||||||| ||||    
T  27666166 aaggacgaatttga 27666179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 304
Target Start/End: Original strand, 39859230 - 39859343
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    ||||||||| ||||| |||||| ||| |||||  ||||||| ||| ||| | ||||||||||| |||| |||||  ||||||||||||   | |||||||    
T  39859230 ttggacggagggaccattttgacggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggactaatttggccgattttttaaaattc 39859329  T
Q  291 aaggacgaagttga 304  Q
    ||||||||| ||||    
T  39859330 aaggacgaatttga 39859343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 209 - 309
Target Start/End: Original strand, 4322591 - 4322691
Alignment:
Q  209 ttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggt 308  Q
    ||||||||||||  ||||||||||||| ||  |||||||||||   ||||| |||| || |||||||||||| | || ||||| ||||||| ||||||||    
T  4322591 ttgatggatgtcaaacaaattcagggactattttgatatttcgttaaattgggggacgagtttggccgatccctgaatattcagggacgaaattgatggt 4322690  T
Q  309 t 309  Q
    |    
T  4322691 t 4322691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 208 - 304
Target Start/End: Original strand, 29996532 - 29996628
Alignment:
Q  208 tttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttga 304  Q
    ||||||||| |||||  ||||||||||||||| ||||||||||||| |||| |||||  || ||| |||||   | |||||||||||||||| ||||    
T  29996532 tttgatggacgtctgtaaaattcagggattaatttgatatttcgcaaaattcagggacaaaattgaccgatttttcaaaattcaaggacgaatttga 29996628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 304
Target Start/End: Complemental strand, 56435 - 56340
Alignment:
Q  209 ttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttga 304  Q
    |||||||| |||||  ||||||||||| ||| ||||||||||||| |||| ||||| ||| || ||||||   | |||||||||||||||| ||||    
T  56435 ttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttga 56340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 304
Target Start/End: Original strand, 35403619 - 35403698
Alignment:
Q  225 aaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttga 304  Q
    ||||||||||| ||| ||||||||||||| |||| ||||| ||| |||||||||   | |||||||||||||||| ||||    
T  35403619 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgattttttaaaattcaaggacgaatttga 35403698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 304
Target Start/End: Original strand, 24228410 - 24228523
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    ||||||| | ||||| |||||||||| |||||  |||||||| || ||| | ||||||||||| |||| ||||| |||||||||| ||   | |||||||    
T  24228410 ttggacgaagggaccattttgatggacgtctgtaaaattcagagactaaatagatatttcgcaaaattcagggacgaatttggccaattttttaaaattc 24228509  T
Q  291 aaggacgaagttga 304  Q
    ||| ||||| ||||    
T  24228510 aagaacgaaattga 24228523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 309
Target Start/End: Complemental strand, 34691100 - 34691000
Alignment:
Q  209 ttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggt 308  Q
    |||||||| ||| ||||||||||| || ||  ||||||||| |   ||||  |||| ||||||||||||||| |||||||||| ||| ||| ||||||||    
T  34691100 ttgatggacgtcagacaaattcagagactattttgatattttgttaaatttggggacgaatttggccgatccctaaaaattcagggatgaaattgatggt 34691001  T
Q  309 t 309  Q
    |    
T  34691000 t 34691000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 304
Target Start/End: Original strand, 13169683 - 13169762
Alignment:
Q  225 aaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttga 304  Q
    ||||||||||| ||| | ||||||||||| |||| |||||  ||||||||||||   | |||||||||||||||| ||||    
T  13169683 aaattcagggactaaatagatatttcgcaaaattcagggacaaatttggccgatttttgaaaattcaaggacgaatttga 13169762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 304
Target Start/End: Complemental strand, 35402058 - 35401979
Alignment:
Q  225 aaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttga 304  Q
    ||||||||||| ||| ||||||||||||| |||| ||||| ||| || ||||||   | |||||||||||||||| ||||    
T  35402058 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattagccgatttttcaaaattcaaggacgaatttga 35401979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 296
Target Start/End: Original strand, 37796104 - 37796287
Alignment:
Q  114 acacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcat-gctaacagagcacttggacggaaggacctttttga 212  Q
    |||||||||| | |||| | |||| ||| ||||||||| | |||||| |  |||| |||||||| |||||| ||||   |||||||| ||||  ||||||    
T  37796104 acacgtggctgccttcttgacacgtgtagaagacaacacaacatgcaagaggacacatcagcatcgctaacggagcttatggacggagggactattttga 37796203  T
Q  213 tggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggac 296  Q
    |||| ||| |  ||||||||||| ||| | ||||||||||| ||||   ||| ||||||||| |||   | |||||||||||||    
T  37796204 tggacgtccgtaaaattcagggactaaatagatatttcgcaaaatttgaggacgaatttggctgatttttgaaaattcaaggac 37796287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 296
Target Start/End: Complemental strand, 20478165 - 20478060
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    ||||||||| ||||   ||||||||| |||||  ||||||||||| ||| ||||||||||| | |||| ||| | ||| |||||||||   | |||||||    
T  20478165 ttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcaggtacgaaattggccgatttttcaaaattc 20478066  T
Q  291 aaggac 296  Q
    ||||||    
T  20478065 aaggac 20478060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 311
Target Start/End: Complemental strand, 34784115 - 34784070
Alignment:
Q  266 gaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||||||| |||  |||||||||||||||||||||| ||||    
T  34784115 gaatttggccgattcgtgcaaattcaaggacgaagttgatgattca 34784070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 296
Target Start/End: Original strand, 38474144 - 38474249
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    ||||||||| ||||| ||||||| |  |||||  ||||||| ||| ||| | ||||||||||| |||| ||||| ||||||| |||||   |||||||||    
T  38474144 ttggacggatggaccattttgataggcgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggacgaatttgaccgatttttaaaaattc 38474243  T
Q  291 aaggac 296  Q
     |||||    
T  38474244 gaggac 38474249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 278
Target Start/End: Complemental strand, 13168246 - 13168156
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagg---gattaagttgatatttcgcataattgagggatgaatttggccgat 278  Q
    ||||||||| ||||| |||||||||| |||||  |||||||||   || ||| | ||||||||||| |||| | ||| |||||||||||||    
T  13168246 ttggacggatggaccattttgatggacgtctgtaaaattcaggagggactaaatagatatttcgcaaaattcaaggacgaatttggccgat 13168156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 216
Target Start/End: Complemental strand, 31913691 - 31913567
Alignment:
Q  93 ttcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagc-atgctaacagagcact 191  Q
    |||||||||||| |||| || |||||||||||| || | | |||| || |||||||||||  |||||| | |||||  ||||| |  ||||| ||||| |    
T  31913691 ttcaatcaaattggtccttgtacacgtggcttccttgtagacacgtgtgcaagacaacaagccatgcaggacgacaactcagcaacactaacggagcatt 31913592  T
Q  192 tggacggaaggacctttttgatgga 216  Q
    |||||||||| ||  ||||||||||    
T  31913591 tggacggaagaactattttgatgga 31913567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 168
Target Start/End: Complemental strand, 38613681 - 38613610
Alignment:
Q  97 atcaaattagtccctgaacacgtggctt-ctttctcgccacgcgtacaagacaacaaagcatgcatggcgaca 168  Q
    ||||| ||||||| |||||||||||||| |||| || ||||| ||||||||||||| | |||||| |||||||    
T  38613681 atcaagttagtccttgaacacgtggctttctttttc-ccacgtgtacaagacaacacaccatgcagggcgaca 38613610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 139; Significance: 1e-72; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 82 - 311
Target Start/End: Complemental strand, 37417506 - 37417276
Alignment:
Q  82 actttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-ct 180  Q
    |||||||| || ||||| |||||||||| ||||||||||||||| |||| |||||| ||||||||||||| |||||||| ||| ||| ||||||||| ||    
T  37417506 actttttccaaatcaattaaattagtccttgaacacgtggcttccttcttgccacgtgtacaagacaacacagcatgcagggcaacagatcagcatggct 37417407  T
Q  181 aacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatcc 280  Q
    ||| ||||||||||||| | |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||    
T  37417406 aacggagcacttggacgaagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttggccgaccc 37417307  T
Q  281 gtaaaaattcaaggacgaagttgatggttca 311  Q
     | ||||||||||||||||  ||||||||||    
T  37417306 atgaaaattcaaggacgaatatgatggttca 37417276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 81 - 311
Target Start/End: Original strand, 29909550 - 29909781
Alignment:
Q  81 aactttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-c 179  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||| | ||||||  |||||| |||| |||| |    
T  29909550 aactttttcaaattcaatcaaattagtcccttaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaacgcgacagatcaacatggc 29909649  T
Q  180 taacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatc 279  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||| ||||| ||| ||||||||||||||||||||||||  || ||||||||      
T  29909650 taacagagcacttggacggagggacctttttgatggacgtctgacaaattaagggactaaattgatatttcgcataattgagggacaaagttggccgacg 29909749  T
Q  280 cgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||| |||||||| |||| || |||||||||||    
T  29909750 cgtgaaaattcagggacaaatttgatggttca 29909781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 79 - 311
Target Start/End: Complemental strand, 15432564 - 15432331
Alignment:
Q  79 tgaactttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg 178  Q
    ||||||||||| ||||||||||||||||||| ||||||| || |||| |||| |||||| ||||||||||||| | |||||| |||||||| ||||||||    
T  15432564 tgaactttttccaattcaatcaaattagtccttgaacacatgacttccttcttgccacgtgtacaagacaacacaacatgcagggcgacatgtcagcatg 15432465  T
Q  179 -ctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccga 277  Q
     |||| |||||||||||||| | | |||||||||||||| ||||||||||||||| || ||| |||||||||||||||||||||||||||||||| ||||    
T  15432464 actaatagagcacttggacgaatgaacctttttgatggacgtctgacaaattcagagactaaattgatatttcgcataattgagggatgaatttgaccga 15432365  T
Q  278 tccgtaaaaattcaaggacgaagttgatggttca 311  Q
     || ||||||||||||||  || |||||||||||    
T  15432364 cccataaaaattcaaggataaatttgatggttca 15432331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 81 - 311
Target Start/End: Complemental strand, 25619894 - 25619663
Alignment:
Q  81 aactttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-c 179  Q
    ||||||||  ||||||||||||||||||| |||||| ||||||||||||| |||||| ||| ||||||||  | ||||||  |||||| |||| |||| |    
T  25619894 aacttttttcaattcaatcaaattagtccttgaacatgtggcttctttcttgccacgtgtataagacaacgcaacatgcagagcgacagatcaacatggc 25619795  T
Q  180 taacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatc 279  Q
    |||| ||||||||||| ||| ||||||||||||||||  | ||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||| |    
T  25619794 taacggagcacttggatggagggacctttttgatggacatatgacaaattcagggactaagttgatattttgcataattgagggatgaatttgaccgacc 25619695  T
Q  280 cgtaaaaattcaaggacgaagttgatggttca 311  Q
    | |||||||||||||||||| |||||||||||    
T  25619694 cataaaaattcaaggacgaatttgatggttca 25619663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 85 - 311
Target Start/End: Original strand, 39291 - 39518
Alignment:
Q  85 ttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcat-gctaac 183  Q
    ||||| |||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||| |||||||| | |||||||||||||| ||||||    
T  39291 ttttccaattcaatcaaatttgtccctgaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacatatcagcatggctaac 39390  T
Q  184 agagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgta 283  Q
     || |||||||||||  |||||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||| |  || ||||| ||  |||     
T  39391 ggaacacttggacggggggacctttttgatgaacgtctgacaaattcagggactaagttgatatttcgcataattgaggtacaaagttggctgacgcgtg 39490  T
Q  284 aaaattcaaggacgaagttgatggttca 311  Q
    |||||||  |||| || |||||||||||    
T  39491 aaaattcggggacaaatttgatggttca 39518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 79 - 311
Target Start/End: Complemental strand, 15372735 - 15372502
Alignment:
Q  79 tgaactttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg 178  Q
    ||||||||||| || ||||||||||| |||||||||||||||||||| |||| ||||||||||||||||| || | |||||| |||||||| | ||||||    
T  15372735 tgaactttttccaaatcaatcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaagacagcacaacatgcaaggcgacatgttagcatg 15372636  T
Q  179 -ctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccga 277  Q
     ||||| |||| | |  ||||| |||||||||||||||| |||||| ||||||||||||||| ||||||||| |||||||||||||  ||||||||||||    
T  15372635 gctaacggagcccgttaacggagggacctttttgatggacgtctgataaattcagggattaaattgatattttgcataattgaggggcgaatttggccga 15372536  T
Q  278 tccgtaaaaattcaaggacgaagttgatggttca 311  Q
     |||| |||||||| |||| || |||||||||||    
T  15372535 cccgtgaaaattcagggactaaattgatggttca 15372502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 85 - 311
Target Start/End: Original strand, 92241 - 92467
Alignment:
Q  85 ttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcat-gctaac 183  Q
    ||||| |||||||||||||| |||||||||||||||||||| |||| ||||| |||||||||||||| |||||||| | |||||||||||||| ||||||    
T  92241 ttttccaattcaatcaaatttgtccctgaacacgtggcttccttcttgccacacgtacaagacaacacagcatgcaagacgacatatcagcatggctaac 92340  T
Q  184 agagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgta 283  Q
     |||||||||||| || |||||||||||||| | ||||||||||||||  || |||||||||||||||||||||||||| | ||| ||| | ||| |||     
T  92341 ggagcacttggactgagggacctttttgatgaacgtctgacaaattcaaagactaagttgatatttcgcataattgaggtacgaagttgactgatgcgtg 92440  T
Q  284 aaaattcaaggacgaagttgatggttca 311  Q
    |||||||| |||| || |||||||||||    
T  92441 aaaattcagggac-aatttgatggttca 92467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 79 - 311
Target Start/End: Complemental strand, 41706775 - 41706542
Alignment:
Q  79 tgaactttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg 178  Q
    ||||||||||| || ||||||||||| ||||||||||||||| |||| |||| ||||||||||||||||| || |||||||| |||||||| ||||||||    
T  41706775 tgaactttttccaaatcaatcaaattcgtccctgaacacgtgacttccttcttgccacgcgtacaagacagcacagcatgcaaggcgacatgtcagcatg 41706676  T
Q  179 -ctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccga 277  Q
     ||||| |||| | |  ||||| |||||||||||||||| ||  || ||||||||||||||| |||||||||||||||||||||||| ||||||| ||||    
T  41706675 gctaacggagcccgttaacggagggacctttttgatggacgttcgataaattcagggattaaattgatatttcgcataattgagggacgaatttgaccga 41706576  T
Q  278 tccgtaaaaattcaaggacgaagttgatggttca 311  Q
     |||| |||||||| | || || |||||||||||    
T  41706575 cccgtgaaaattcaggaactaaattgatggttca 41706542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 111 - 315
Target Start/End: Complemental strand, 42879559 - 42879355
Alignment:
Q  111 tgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-ctaacagagcacttggacggaaggacctttt 209  Q
    |||||||||| |||| |||| | |||| ||||||||||||| |||||||| ||||||||||||||||| ||||| || |||||||||||| |||||||||    
T  42879559 tgaacacgtgacttccttcttgtcacgtgtacaagacaacacagcatgcagggcgacatatcagcatgactaacggaacacttggacggagggacctttt 42879460  T
Q  210 tgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggtt 309  Q
    ||||||| ||||||||||||||  || ||||||||| |||||||||||| ||||||||||||| |||| ||||||||||| ||||||||| |||||||||    
T  42879459 tgatggacgtctgacaaattcatagactaagttgat-tttcgcataattaagggatgaatttgaccgacccgtaaaaatttaaggacgaatttgatggtt 42879361  T
Q  310 cattct 315  Q
    | ||||    
T  42879360 ccttct 42879355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 79 - 311
Target Start/End: Complemental strand, 42001845 - 42001613
Alignment:
Q  79 tgaactttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg 178  Q
    |||| |||||| ||||||||||||| ||||| |||||||||| |||| |||| | |||| ||||||||||||  | |||||| ||||||| |||| ||||    
T  42001845 tgaattttttccaattcaatcaaatcagtccttgaacacgtgacttccttcttgtcacgtgtacaagacaactcaacatgcagggcgacacatcaacatg 42001746  T
Q  179 -ctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccga 277  Q
     |||||  |||||||||| ||| | |||||||||||| |||||||||||||||| ||||||| ||||||||||||||||| ||||||| ||||||| | |    
T  42001745 gctaacgaagcacttggatggatgaacctttttgatg-atgtctgacaaattcaaggattaaattgatatttcgcataatagagggataaatttggacaa 42001647  T
Q  278 tccgtaaaaattcaaggacgaagttgatggttca 311  Q
     ||||||||||||||||||||| |||||||||||    
T  42001646 cccgtaaaaattcaaggacgaatttgatggttca 42001613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 153 - 310
Target Start/End: Complemental strand, 39718 - 39560
Alignment:
Q  153 agcatgcatggcgacatatcagcatg-ctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcg 251  Q
    |||| |||||||||||| |||||||| |||||  |||||||||||||| |||||||||| || || | |||| ||||||||||||||| |||||||||||    
T  39718 agcacgcatggcgacatgtcagcatggctaacgaagcacttggacggagggacctttttaatcgacgcctgataaattcagggattaaattgatatttcg 39619  T
Q  252 cataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttc 310  Q
    ||||||||||||| |||||||||||| ||||||||||||| |||| || ||||||||||    
T  39618 cataattgagggacgaatttggccgacccgtaaaaattcagggactaaattgatggttc 39560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 28248175 - 28248263
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||| |||||||| ||||||||||||| |||||||||||||| ||||    
T  28248175 acaaattcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcagggacgaagttgatgattca 28248263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 225 - 311
Target Start/End: Original strand, 41144 - 41230
Alignment:
Q  225 aaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||| |||||||| |||||||||||||| ||||    
T  41144 aaattcagggattaaattgatatttcgcataattgagggacgaatttggccgacccgtgaaaattcagggacgaagttgatgattca 41230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 11021624 - 11021536
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||| |||||||| |||| |||||||| |||||||||||||| ||||    
T  11021624 acaaattcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtgaaaattcagggacgaagttgatgattca 11021536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 209 - 311
Target Start/End: Complemental strand, 361550 - 361448
Alignment:
Q  209 ttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggt 308  Q
    |||||||| ||||||| ||||||  || ||| |||||||||| |||||||||||||||| |||||||||| | | ||||||||||||||||||||||| |    
T  361550 ttgatggacgtctgacgaattcaatgactaatttgatatttcacataattgagggatgattttggccgattcatgaaaattcaaggacgaagttgatgat 361451  T
Q  309 tca 311  Q
    |||    
T  361450 tca 361448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 33284 - 33196
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||||||||||| |||||||||| ||||||||| ||| ||| |||||||| |||| |||||||| |||||||||||||| ||||    
T  33284 acaaattcagggattaaattgatatttcacataattgaaggacgaagttggccgacccgtgaaaattcagggacgaagttgatgattca 33196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 41708430 - 41708518
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||| | ||||||  ||| ||||||||| ||||    
T  41708430 acaaattcagggattaaattgatatttcgcataattgagggacgaatttggccgacccgtgataattcagagactaagttgatgattca 41708518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 42880811 - 42880899
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||| | ||||||| |||||||||||||||||| ||||| ||||||| |||| ||||||||||||| |||||||||||||| ||||    
T  42880811 acaaatttatggattaaattgatatttcgcataattaagggacgaatttgaccgacccgtaaaaattcagggacgaagttgatgattca 42880899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 191 - 304
Target Start/End: Complemental strand, 16763199 - 16763086
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    ||||||||| ||||| |||||||||| |||||  ||||||||||| ||| | ||||||||||| |||| ||||| ||||||| |||||   |||||||||    
T  16763199 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccgatttttaaaaattc 16763100  T
Q  291 aaggacgaagttga 304  Q
    ||||||||| ||||    
T  16763099 aaggacgaatttga 16763086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 191 - 311
Target Start/End: Original strand, 11315336 - 11315456
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    ||||||||| ||||| |||||||||| |||||||||||||||| | ||  |||||||||||   ||||  || | ||||||||||||| | ||||||||     
T  11315336 ttggacggagggaccattttgatggacgtctgacaaattcaggaactattttgatatttcgttaaattagggaacgaatttggccgattcataaaaattt 11315435  T
Q  291 aaggacgaagttgatggttca 311  Q
    |||||||||||||||| ||||    
T  11315436 aaggacgaagttgatgattca 11315456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 15373888 - 15373976
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||||| ||||| |||||||||||||||||||||| | |||||||||||| | || | |||||| |||| ||||||||| ||||    
T  15373888 acaaattcaggaattaaattgatatttcgcataattgaggaacgaatttggccgacctgtgataattcagggactaagttgatgattca 15373976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 37418769 - 37418857
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||| ||||||||  ||||||||| |||||||| | ||| |||||||||||| |||| |||||||||| |||||||||||| ||||    
T  37418769 acaaatttagggattagattgatattttgcataattaaaggacgaatttggccgacccgtgaaaattcaagtacgaagttgatgattca 37418857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 304
Target Start/End: Complemental strand, 40560441 - 40560233
Alignment:
Q  97 atcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-ctaacagagcacttgga 195  Q
    ||||| ||||||| || |||||||||| | || | | |||||||||| ||||||| |||||||| |  |||| |||| ||   |||||||| |  |||||    
T  40560441 atcaatttagtccttgtacacgtggctgccttgttgacacgcgtacatgacaacacagcatgcaagaggacacatcatcaccactaacagaacttttgga 40560342  T
Q  196 cggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaagga 295  Q
    |||| ||||  |||||||||| |||||  ||||||||||| ||| | ||||||||||| |||| ||||| ||||||||| |||   | ||||||||| ||    
T  40560341 cggagggactattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggctgattttttaaaattcaaaga 40560242  T
Q  296 cgaagttga 304  Q
    |||| ||||    
T  40560241 cgaatttga 40560233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 42003490 - 42003578
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    |||||||||| |||||| |||||||||||||||||||| | | ||||||| | ||||| |||||||||||| |||||||| ||| ||||    
T  42003490 acaaattcagagattaaattgatatttcgcataattgatgaacgaatttgactgatccttaaaaattcaagaacgaagttaatgattca 42003578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 191 - 304
Target Start/End: Original strand, 39664769 - 39664882
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    ||||||||| ||||| |||||||||| |||||  ||||||||||| ||| | ||||||||| | ||||  |||| |||||||||||||   | |||||||    
T  39664769 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgtaaaattcggggacgaatttggccgattttttaaaattc 39664868  T
Q  291 aaggacgaagttga 304  Q
    ||||||||| ||||    
T  39664869 aaggacgaatttga 39664882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 304
Target Start/End: Original strand, 14389105 - 14389218
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    ||||||||| ||||| ||||||||||  | ||  ||||||||||| ||| | ||||||||||| |||| ||||| |||||||||||||   | |||||||    
T  14389105 ttggacggagggaccattttgatggacatttggaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgatttttgaaaattc 14389204  T
Q  291 aaggacgaagttga 304  Q
    || |||||| ||||    
T  14389205 aatgacgaatttga 14389218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 304
Target Start/End: Original strand, 44709766 - 44709879
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    ||||||||| ||||| |||||||||| |||||  ||||||||||| ||| | | ||||||||| |||| ||||  ||||||||||| |   | |||||||    
T  44709766 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagttatttcgcaaaattcagggccgaatttggccggttttttaaaattc 44709865  T
Q  291 aaggacgaagttga 304  Q
    ||||||||| ||||    
T  44709866 aaggacgaatttga 44709879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 191 - 295
Target Start/End: Original strand, 24208063 - 24208167
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    ||||||||| ||||   ||||||||| |||||  ||||||||||| ||| ||||||||||| |||||| ||||| ||| |||||||||   | |||||||    
T  24208063 ttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaataattcagggacgaaattggccgatttttcaaaattc 24208162  T
Q  291 aagga 295  Q
    |||||    
T  24208163 aagga 24208167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 304
Target Start/End: Original strand, 16764611 - 16764690
Alignment:
Q  225 aaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttga 304  Q
    ||||||||||| ||| ||||||||||||| |||| ||||| ||| |||||||||   | |||||||||||||||| ||||    
T  16764611 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttctcaaaattcaaggacgaatttga 16764690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 311
Target Start/End: Complemental strand, 28246768 - 28246666
Alignment:
Q  209 ttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggt 308  Q
    |||||||| |||  ||||||||||| | ||  |||||||||||   ||||  |||| |||||||||||| || |||||||||| ||||||| ||||||||    
T  28246768 ttgatggacgtcaaacaaattcaggaactattttgatatttcgttaaatttggggacgaatttggccgacccctaaaaattcagggacgaaattgatggt 28246669  T
Q  309 tca 311  Q
    |||    
T  28246668 tca 28246666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 304
Target Start/End: Complemental strand, 2767057 - 2766944
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    |||||| || ||||| ||||||| || |||||  ||||||||||| ||| | ||||||||||| |||| | ||| || |||| |||||   |||||||||    
T  2767057 ttggacagagggaccattttgatagacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgagtttgaccgatttttaaaaattc 2766958  T
Q  291 aaggacgaagttga 304  Q
    ||||||||| ||||    
T  2766957 aaggacgaatttga 2766944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 296
Target Start/End: Original strand, 6786002 - 6786107
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    ||||||||| ||||   ||||||||| |||||  ||||||||||| ||| ||||||||||  |||||| ||||| ||| |||||||||   | |||||||    
T  6786002 ttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcaaataattaagggacgaaattggccgatttttcaaaattc 6786101  T
Q  291 aaggac 296  Q
    ||||||    
T  6786102 aaggac 6786107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 310
Target Start/End: Original strand, 11023032 - 11023132
Alignment:
Q  209 ttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggt 308  Q
    |||||||| |||  ||||||||||||| ||  |||||||||||   ||||| |||| |||||||||||| || | |||||||| ||||||| ||||||||    
T  11023032 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaattgggggacgaatttggccga-ccctgaaaattcagggacgaaattgatggt 11023130  T
Q  309 tc 310  Q
    ||    
T  11023131 tc 11023132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 304
Target Start/End: Complemental strand, 17696329 - 17696216
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    |||||||||  |||| ||||||| || || ||  ||||||||||| ||| | |||||||  || |||| |||||||||||||||||||   | |||||||    
T  17696329 ttggacggagtgaccattttgattgacgtttgtaaaattcagggactaaatagatattttccaaaattcagggatgaatttggccgatttttgaaaattc 17696230  T
Q  291 aaggacgaagttga 304  Q
    ||||||||| ||||    
T  17696229 aaggacgaatttga 17696216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 304
Target Start/End: Complemental strand, 14387438 - 14387359
Alignment:
Q  225 aaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttga 304  Q
    ||||||||||| ||| ||||||||||| | |||| ||||| ||| |||||||||   | |||||||||||||||| ||||    
T  14387438 aaattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 14387359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 278
Target Start/End: Original strand, 19908267 - 19908354
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgat 278  Q
    ||||||||| ||||| |||||| ||| |||||  ||||||| ||| ||| | ||||||||||| |||| |||||  ||||||||||||    
T  19908267 ttggacggagggaccattttgacggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggactaatttggccgat 19908354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 135; Significance: 3e-70; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 82 - 311
Target Start/End: Original strand, 18430162 - 18430392
Alignment:
Q  82 actttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-ct 180  Q
    |||||||| ||||||||||||||||||| ||||||||||| ||| |||| |||||| |||||||||||||  ||||||| |||||||| ||| |||| ||    
T  18430162 actttttccaattcaatcaaattagtccttgaacacgtggtttccttcttgccacgtgtacaagacaacacggcatgcagggcgacatgtcaccatggct 18430261  T
Q  181 aacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatcc 280  Q
    ||| ||||||||||||||| ||||||||||  |||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| || ||    
T  18430262 aacggagcacttggacggagggacctttttattggacgtctgacatattcagggactaagttgatatttcgcataattgagggatgaatttggctgaccc 18430361  T
Q  281 gtaaaaattcaaggacgaagttgatggttca 311  Q
    || |||||||||||||||| |||||||||||    
T  18430362 gttaaaattcaaggacgaatttgatggttca 18430392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 82 - 311
Target Start/End: Original strand, 45257111 - 45257341
Alignment:
Q  82 actttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-ct 180  Q
    |||||||| ||||||||||||||||||| ||||||||||||||| |||| |||||| ||||||||||||| | |||||| |||| ||| |||||||| ||    
T  45257111 actttttccaattcaatcaaattagtccttgaacacgtggcttcattcttgccacgtgtacaagacaacacaacatgcagggcggcatgtcagcatgact 45257210  T
Q  181 aacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatcc 280  Q
    ||| ||||||||||||||| |||| ||||| ||||| |||||||||||||||| | |||||||||||||  |||||||||||||||||||||||||| ||    
T  45257211 aacggagcacttggacggagggacattttttatggacgtctgacaaattcaggaactaagttgatattttacataattgagggatgaatttggccgaccc 45257310  T
Q  281 gtaaaaattcaaggacgaagttgatggttca 311  Q
    || |||||||||| ||||| |||||||||||    
T  45257311 gtgaaaattcaagaacgaatttgatggttca 45257341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 79 - 311
Target Start/End: Original strand, 24382781 - 24383014
Alignment:
Q  79 tgaactttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg 178  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||| || | ||| ||  || ||||||||| | |||||| |||||||||||||||||    
T  24382781 tgaactttttccaattcaatcaaattagtccttgaacacgtggcttcctttttgccccgtatataagacaacacaacatgcagggcgacatatcagcatg 24382880  T
Q  179 -ctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccga 277  Q
     ||||| ||  ||||||||||| |||||||||||||||| ||||||||||| || ||| |||||||||||||| ||||||||| ||||||||||||||||    
T  24382881 gctaacggatgacttggacggagggacctttttgatggacgtctgacaaatccatggactaagttgatatttctcataattgaaggatgaatttggccga 24382980  T
Q  278 tccgtaaaaattcaaggacgaagttgatggttca 311  Q
     |||||||||||||||||| || |||||||||||    
T  24382981 cccgtaaaaattcaaggaccaatttgatggttca 24383014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 97 - 311
Target Start/End: Original strand, 31887358 - 31887573
Alignment:
Q  97 atcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-ctaacagagcacttgga 195  Q
    ||||||||||||| ||||||  ||||||| || | |||||| ||||||||||||| |||||||| ||||||| ||||||||| ||||| |||||||||||    
T  31887358 atcaaattagtccttgaacatatggcttcctttttgccacgtgtacaagacaacacagcatgcaaggcgacaaatcagcatggctaacggagcacttgga 31887457  T
Q  196 cggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaagga 295  Q
    |||| ||||||||||||| ||  ||||||||||||||||| |||||||||||||||||||||||| || |||||||| ||||||||| ||||||||||||    
T  31887458 cggagggacctttttgatagacatctgacaaattcagggactaagttgatatttcgcataattgatggttgaatttgaccgatccgtgaaaattcaagga 31887557  T
Q  296 cgaagttgatggttca 311  Q
    |||| |||||||||||    
T  31887558 cgaatttgatggttca 31887573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 91 - 311
Target Start/End: Complemental strand, 48634105 - 48633880
Alignment:
Q  91 aattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaa----caaagcatgcatggcgacatatcagcatg-ctaacag 185  Q
    ||||||||||||||||||| ||||||||||||||| || | |||||| |||||||||||    || | |||||| ||||||| |||| |||| ||||| |    
T  48634105 aattcaatcaaattagtccttgaacacgtggcttcctttttgccacgtgtacaagacaaacaacacatcatgcagggcgacagatcaacatggctaacgg 48634006  T
Q  186 agcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaa 285  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||| ||||||| |||| |||| ||    
T  48634005 agcacttggacggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgatggacgaatttgaccgacccgtgaa 48633906  T
Q  286 aattcaaggacgaagttgatggttca 311  Q
    |||||||||||||| |||||||||||    
T  48633905 aattcaaggacgaatttgatggttca 48633880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 85 - 311
Target Start/End: Original strand, 23888666 - 23888893
Alignment:
Q  85 ttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-ctaac 183  Q
    ||||| |||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||| || ||||| ||||||| ||||||| | |||||    
T  23888666 ttttccaattcaatcaaattagtccctgaacatgtggcttccttcttgccacgcgtacaagacaacacagtatgcaaggcgacagatcagcaaggctaac 23888765  T
Q  184 agagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgta 283  Q
     ||| | ||||||||| |||||||||||||||| || ||||||||||||||| |||| ||||||||||||||||||||||| ||| ||||||||   ||     
T  23888766 ggaggatttggacggagggacctttttgatggacgtttgacaaattcagggactaagctgatatttcgcataattgagggacgaagttggccgacgtgtg 23888865  T
Q  284 aaaattcaaggacgaagttgatggttca 311  Q
    |||||||| ||||||| |||||||||||    
T  23888866 aaaattcagggacgaatttgatggttca 23888893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 82 - 311
Target Start/End: Complemental strand, 23774384 - 23774155
Alignment:
Q  82 actttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-ct 180  Q
    |||||||| || |||||| ||||||||| ||||||||||||||| || | |||||| ||||||||||||| | |||||| ||||||| |||| |||| ||    
T  23774384 actttttccaaatcaatcgaattagtccttgaacacgtggcttccttattgccacgtgtacaagacaacacatcatgcagggcgacagatcaacatggct 23774285  T
Q  181 aacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatcc 280  Q
    |||||||||||| |||| | |||| ||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||  |    
T  23774284 aacagagcacttagacg-agggacttttttgatggacgtctgacaaattcagggactaaattgatatttcgcataattgagggacgaatttggccgactc 23774186  T
Q  281 gtaaaaattcaaggacgaagttgatggttca 311  Q
    || |||||||||||||||| |||||||||||    
T  23774185 gtgaaaattcaaggacgaatttgatggttca 23774155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 84 - 296
Target Start/End: Original strand, 33852563 - 33852776
Alignment:
Q  84 tttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-ctaa 182  Q
    |||||| ||||||||||||||||||| ||||||||||||||| |||| ||||||  |||||||||||| | |||||| |||||||| ||| |||| ||||    
T  33852563 tttttccaattcaatcaaattagtccttgaacacgtggcttccttcttgccacgtctacaagacaacacaacatgcagggcgacatgtcaccatggctaa 33852662  T
Q  183 cagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgt 282  Q
    | |||||||||||| || |||||||||||||||| |||||| ||||||||  ||||| ||||||||||||||||||||||||| |||||| || | ||||    
T  33852663 cggagcacttggacagagggacctttttgatggacgtctgataaattcagaaattaaattgatatttcgcataattgagggataaatttgaccaacccgt 33852762  T
Q  283 aaaaattcaaggac 296  Q
    ||||||||||||||    
T  33852763 aaaaattcaaggac 33852776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 79 - 311
Target Start/End: Original strand, 41020891 - 41021124
Alignment:
Q  79 tgaactttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg 178  Q
    ||||||||||| || ||||||||||| |||||||||||||||||||| |||| |||||||||||| |||| || |||||||  |||||||| ||||||||    
T  41020891 tgaactttttccaaatcaatcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaggacagcacagcatgccaggcgacatgtcagcatg 41020990  T
Q  179 -ctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccga 277  Q
     ||||| |||| | |  ||||| |||||||||||||||| ||||||||||||||||||| || |||| |||||||||||||||||||  |||||||||||    
T  41020991 gctaacggagcccgttaacggagggacctttttgatggacgtctgacaaattcagggatgaaattgaaatttcgcataattgagggactaatttggccga 41021090  T
Q  278 tccgtaaaaattcaaggacgaagttgatggttca 311  Q
      ||| |||||||| ||||||| |||||||||||    
T  41021091 cgcgtgaaaattcagggacgaatttgatggttca 41021124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 97 - 311
Target Start/End: Original strand, 2977235 - 2977450
Alignment:
Q  97 atcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcat-gctaacagagcacttgga 195  Q
    ||||||||||||| |||||| |||| ||| |||| |||||| |||  |||||||| |||||||| ||||||| |||||||| |||||| ||||||||||     
T  2977235 atcaaattagtccttgaacatgtggtttccttcttgccacgtgtattagacaacatagcatgcagggcgacaaatcagcatcgctaacggagcacttggg 2977334  T
Q  196 cggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaagga 295  Q
    |||| |||||||||||||||| || ||||||||| ||||| | | |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  2977335 cggatggacctttttgatggacgtatgacaaatttagggactgaattgatatttcgcataattaagggatgaatttggccgattcgtaaaaattcaagga 2977434  T
Q  296 cgaagttgatggttca 311  Q
    |||| |||||| ||||    
T  2977435 cgaatttgatgattca 2977450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 84 - 311
Target Start/End: Original strand, 33113074 - 33113301
Alignment:
Q  84 tttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-ctaa 182  Q
    |||||| | ||| ||||||||||||| ||||||||||||||| || | |||||| |||||||||| |  | |||||  ||||||| ||| ||||| ||||    
T  33113074 tttttccacttccatcaaattagtccttgaacacgtggcttcctttttgccacgtgtacaagacagcgcaacatgctgggcgacagatcggcatggctaa 33113173  T
Q  183 cagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgt 282  Q
    | || |||||| ||||| |||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||| ||||    
T  33113174 cggatcacttg-acggagggacctttttgatggacgtctgacaaatttagggactaagttgatatttcgcataattgagggatgattttggccgacccgt 33113272  T
Q  283 aaaaattcaaggacgaagttgatggttca 311  Q
    |||||||||||||| || |||||||||||    
T  33113273 aaaaattcaaggactaatttgatggttca 33113301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 134 - 311
Target Start/End: Original strand, 40508854 - 40509032
Alignment:
Q  134 cacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-ctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattcag 232  Q
    |||| ||||| ||||||| | |||||| ||||||| ||||||| | ||||| || |||||||||||| |||| ||||||||||| ||||||||||||||     
T  40508854 cacgtgtacatgacaacacaacatgcagggcgacagatcagcacgactaacggaacacttggacggagggacatttttgatggacgtctgacaaattcaa 40508953  T
Q  233 ggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||| |||||||||||    
T  40508954 ggattaagttgatatttcgcataattgagggacgaatttggccgacccgtgaaaattcaaggacgaatttgatggttca 40509032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 82 - 311
Target Start/End: Original strand, 51454137 - 51454371
Alignment:
Q  82 actttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatc----agcat 177  Q
    |||||||  |||| |||| ||||||||| |||||||||||| || |||| |||||| ||| ||||||||| | |||||| || |||||||     | |||    
T  51454137 acttttttcaatttaatctaattagtccttgaacacgtggcctccttcttgccacgtgtataagacaacacatcatgcagggggacatatatatgaacat 51454236  T
Q  178 g-ctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccg 276  Q
    | ||||| || ||||||||| || |||| ||||| |||||||| |||||||||||  || ||| |||||||||||||||||||||| |||||||||||||    
T  51454237 ggctaacggatcacttggacagagggacattttttatggatgtttgacaaattcaaagactaatttgatatttcgcataattgaggaatgaatttggccg 51454336  T
Q  277 atccgtaaaaattcaaggacgaagttgatggttca 311  Q
    |||||| |||||||||||||||| |||||||||||    
T  51454337 atccgtgaaaattcaaggacgaatttgatggttca 51454371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 45897141 - 45897053
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||| ||||    
T  45897141 acaaattcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcaaggacgaagttgatgattca 45897053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 98 - 259
Target Start/End: Complemental strand, 1846001 - 1845839
Alignment:
Q  98 tcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatgct-aacagagcacttggac 196  Q
    |||||||||||| ||||||||||||||| || | |||||| ||| | |||| || | |||||| |||||||||||| |||| | ||| ||||||||||||    
T  1846001 tcaaattagtccttgaacacgtggcttcctttttgccacgtgtataggacatcacatcatgcagggcgacatatcaacatggttaacggagcacttggac 1845902  T
Q  197 ggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattg 259  Q
    ||| |||| ||||||||||| ||||| ||||||||  || ||||||||||||| |||||||||    
T  1845901 ggagggacgtttttgatggacgtctgtcaaattcaaagactaagttgatattttgcataattg 1845839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 178 - 311
Target Start/End: Original strand, 39641827 - 39641960
Alignment:
Q  178 gctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccga 277  Q
    |||||| ||| ||||| ||||| |||||||||| ||| | |||||||||||| | ||| |||||||||| || | ||||||||| |||||||||||||||    
T  39641827 gctaacggagtacttgaacggagggaccttttttatgaacgtctgacaaatttaaggactaagttgatactttgaataattgagagatgaatttggccga 39641926  T
Q  278 tccgtaaaaattcaaggacgaagttgatggttca 311  Q
     |||||||||||||||||| || |||||||||||    
T  39641927 cccgtaaaaattcaaggacaaatttgatggttca 39641960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 33111932 - 33111844
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||| |||||||| |||||||||||||| ||||    
T  33111932 acaaattcagggattaaattgatatttcgcataattgagggatgaatttgaccgagccgtgaaaattcagggacgaagttgatgattca 33111844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 24381824 - 24381759
Alignment:
Q  234 gattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaa 299  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24381824 gattaaattgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaa 24381759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 178 - 311
Target Start/End: Original strand, 45898336 - 45898469
Alignment:
Q  178 gctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccga 277  Q
    |||||| ||| ||||||||||| ||||||||||||| || |||||||||||||| ||| |||||||||||||||||||||| |||||  || |||| |||    
T  45898336 gctaacggaggacttggacggagggacctttttgatagacgtctgacaaattcaaggactaagttgatatttcgcataattcagggacaaagttggtcga 45898435  T
Q  278 tccgtaaaaattcaaggacgaagttgatggttca 311  Q
       || |||||||| ||||||| |||||||||||    
T  45898436 cgtgtgaaaattcagggacgaatttgatggttca 45898469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 1847645 - 1847733
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||| || |||||| ||||    
T  1847645 acaaattcagggattaaattgatattttgcataattgagggatgaatttggccgacccgtgaaaattcaaggacaaatttgatgattca 1847733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 223 - 299
Target Start/End: Complemental strand, 2975551 - 2975475
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaa 299  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||    
T  2975551 acaaattcagggattaaattgatatttcgcatcattgagggatgaatttagctgatccgtaaaaattcaaggacgaa 2975475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 23887289 - 23887201
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||| || ||||| || ||||||||||||||||||||||||| ||||    
T  23887289 acaaattcagggattaaattgatatttcgcataattgagggacgaagttagccgacccataaaaattcaaggacgaagttgatgattca 23887201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 48635373 - 48635461
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||||||||||| |||||||||||||||||| ||||| ||||||| ||||||||| |||||||| ||||||| |||||| ||||    
T  48635373 acaaattcagggattaaattgatatttcgcataattaagggacgaatttgaccgatccgtgaaaattcagggacgaaattgatgattca 48635461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 40508584 - 40508496
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||||||||||| |||| ||||||||||||| ||||| ||||||| |||| |||| |||||||| |||||||||||||| ||||    
T  40508584 acaaattcagggattaaattgagatttcgcataattaagggacgaatttgtccgacccgtgaaaattcagggacgaagttgatgattca 40508496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 45255574 - 45255486
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    |||||||||||||||||  | |||||| ||||||||||| |||||| ||| |||||||||||||||||| |||||||||||||| ||||    
T  45255574 acaaattcagggattaaagtaatattttgcataattgagtgatgaagttgaccgatccgtaaaaattcagggacgaagttgatgattca 45255486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 191 - 304
Target Start/End: Original strand, 53190780 - 53190893
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    ||||||||| ||||| |||||||||| |||||  ||||||||||| ||| | ||||||||||| |||| ||||| |||||||||||||   | |||||||    
T  53190780 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattc 53190879  T
Q  291 aaggacgaagttga 304  Q
    ||||||||| ||||    
T  53190880 aaggacgaatttga 53190893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 306
Target Start/End: Complemental strand, 18428829 - 18428757
Alignment:
Q  234 gattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatg 306  Q
    |||||| |||||||||||||||||||||||| ||| ||| |||| ||||||||||||| ||||||||||||||    
T  18428829 gattaaattgatatttcgcataattgagggacgaagttgaccgacccgtaaaaattcagggacgaagttgatg 18428757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 97 - 304
Target Start/End: Original strand, 30599844 - 30600052
Alignment:
Q  97 atcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-ctaacagagcacttgga 195  Q
    ||||| ||||||| || |||||||||| | || | | || | ||||||||||||| |||||||| |  |||| |||| ||   ||||||||||  |||||    
T  30599844 atcaatttagtccttgtacacgtggctgccttattgacatgtgtacaagacaacacagcatgcaagaggacacatcatcaccactaacagagcttttgga 30599943  T
Q  196 cggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaagga 295  Q
    |||| ||||| ||||||| || ||||   ||||||||||| ||| | ||||||||||| |||| |||||  ||||||||||||  ||||||||| |||||    
T  30599944 cggagggaccattttgatcgacgtctctaaaattcagggactaaatagatatttcgcaaaattcagggacaaatttggccgatttgtaaaaatttaagga 30600043  T
Q  296 cgaagttga 304  Q
    |||| ||||    
T  30600044 cgaatttga 30600052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 179 - 296
Target Start/End: Complemental strand, 21348858 - 21348741
Alignment:
Q  179 ctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgat 278  Q
    ||||||||||  ||||||||| ||||| |||||||||| |||||  ||||||||||| ||| | ||||||||||| |||| | ||| |||||||||||||    
T  21348858 ctaacagagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgaatttggccgat 21348759  T
Q  279 ccgtaaaaattcaaggac 296  Q
       | |||||||||||||    
T  21348758 tttttaaaattcaaggac 21348741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 304
Target Start/End: Original strand, 2226079 - 2226286
Alignment:
Q  97 atcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-ctaacagagcacttgga 195  Q
    ||||| ||||||| || |||||||||| | || | | |||| ||||||||||||| |||||||| || ||||  ||| ||   |||||||||   |||||    
T  2226079 atcaatttagtccttgtacacgtggctaccttgttgacacgtgtacaagacaacacagcatgcaagg-gacacgtcatcaccactaacagagtttttgga 2226177  T
Q  196 cggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaagga 295  Q
    |||| ||| | |||||||| | |||||  ||||||||||| ||| | ||||||||||| |||| ||||| |||||||||||||   | ||||||||||||    
T  2226178 cggagggaacattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaagga 2226277  T
Q  296 cgaagttga 304  Q
    |||| ||||    
T  2226278 cgaatttga 2226286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 224 - 299
Target Start/End: Complemental strand, 31885608 - 31885533
Alignment:
Q  224 caaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaa 299  Q
    |||||||| | | ||| |||||||||||||||||| ||||||||||||| |||| |||||||||| ||||||||||    
T  31885608 caaattcaagtactaaattgatatttcgcataattaagggatgaatttgaccgacccgtaaaaatccaaggacgaa 31885533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 191 - 304
Target Start/End: Original strand, 27899102 - 27899215
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    ||||||||| ||||| |||| ||||| |||||  ||||||||||| ||| | ||||||||||| |||| | ||| |||||||||||||   | |||||||    
T  27899102 ttggacggagggaccatttttatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgaatttggccgattttttaaaattc 27899201  T
Q  291 aaggacgaagttga 304  Q
    ||||||||| ||||    
T  27899202 aaggacgaatttga 27899215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 191 - 304
Target Start/End: Complemental strand, 41977873 - 41977760
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    ||||||||| ||||| |||||| ||| |||||  ||||||||||| ||| ||||||||||||  |||| ||||| | |||||||||||   | |||||||    
T  41977873 ttggacggagggaccattttgacggacgtctgtaaaattcagggactaatttgatatttcgccaaattcagggacgtatttggccgattttttaaaattc 41977774  T
Q  291 aaggacgaagttga 304  Q
    ||||||||| ||||    
T  41977773 aaggacgaatttga 41977760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 191 - 304
Target Start/End: Complemental strand, 51684733 - 51684620
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    ||||||||| ||||| |||||||||| |||||  ||||||| ||| ||| | ||||||| ||| |||| ||||||||||||||| |||   | |||||||    
T  51684733 ttggacggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatattttgcaaaattcagggatgaatttggctgatttttgaaaattc 51684634  T
Q  291 aaggacgaagttga 304  Q
    ||||||||| ||||    
T  51684633 aaggacgaatttga 51684620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 33851073 - 33850985
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    |||||||||| |||||| ||||||||||| |||||||||||| ||| ||| |||| |||| |||||||| | ||||| |||||| ||||    
T  33851073 acaaattcagagattaaattgatatttcggataattgagggacgaagttgaccgacccgtgaaaattcaggaacgaaattgatgattca 33850985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 278
Target Start/End: Original strand, 3152239 - 3152326
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgat 278  Q
    ||||||||| ||||   ||||||||| |||||  ||||||||||| ||| ||||||||||||| |||| ||||||||| |||||||||    
T  3152239 ttggacggagggacggatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccgat 3152326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 304
Target Start/End: Complemental strand, 17515433 - 17515320
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    |||||| || ||||| |||||||||| || ||  ||||||||||| ||| | ||||||||||| |||| || ||||||||||||| ||   |||||||||    
T  17515433 ttggacagagggaccattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcagcgatgaatttggccaatttttaaaaattc 17515334  T
Q  291 aaggacgaagttga 304  Q
    ||||| ||| ||||    
T  17515333 aaggaagaatttga 17515320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 37865475 - 37865434
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgaggga 264  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  37865475 acaaattcagggattaaattgatatttcgcataattgaggga 37865434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 304
Target Start/End: Complemental strand, 44794330 - 44794218
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    ||||||||| ||||   |||||||||  ||||  ||||||||||| ||| ||||||||||||| |||| ||||||||| |||||||||   | |||||||    
T  44794330 ttggacggagggacgaatttgatggacttctgcaaaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccgat-tttcaaaattc 44794232  T
Q  291 aaggacgaagttga 304  Q
    ||||||||| ||||    
T  44794231 aaggacgaatttga 44794218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 138
Target Start/End: Original strand, 45898271 - 45898324
Alignment:
Q  85 ttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgc 138  Q
    ||||| ||||||||||||||||||||| ||||||||||||| |||| |||||||    
T  45898271 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgc 45898324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 304
Target Start/End: Complemental strand, 54898560 - 54898447
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    |||||||||  |||| |||||||| | |||||  ||||||||||| ||| | ||||||||||| |||| ||||| ||||||| |||||   | |||||||    
T  54898560 ttggacggagagaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattc 54898461  T
Q  291 aaggacgaagttga 304  Q
    ||||||||| ||||    
T  54898460 aaggacgaatttga 54898447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 191 - 295
Target Start/End: Original strand, 35905733 - 35905837
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    ||||||||| ||||| |||||||| | |||||  ||||||||||| ||| | ||||||||||| |||| ||||| ||||||| |||||   | |||||||    
T  35905733 ttggacggagggaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattc 35905832  T
Q  291 aagga 295  Q
    |||||    
T  35905833 aagga 35905837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 40998606 - 40998518
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    |||||||||||||| ||  ||| |||||||||||||||||||  |||||| ||||  ||| |||||||| |||| || |||||||||||    
T  40998606 acaaattcagggatgaaaatgaaatttcgcataattgagggactaatttgaccgacgcgtgaaaattcagggactaacttgatggttca 40998518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 225 - 309
Target Start/End: Complemental strand, 41944665 - 41944581
Alignment:
Q  225 aaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggtt 309  Q
    ||||||||||| ||  |||||||||||   ||||| |||| ||||||||||||||| | |||||||| ||||||| |||||||||    
T  41944665 aaattcagggactattttgatatttcgttaaattgggggacgaatttggccgatccctgaaaattcagggacgaaattgatggtt 41944581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 304
Target Start/End: Original strand, 38193510 - 38193589
Alignment:
Q  225 aaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttga 304  Q
    ||||||||||| ||| ||||||||||||| |||| ||||| ||| |||||||||   | |||||||||||||||| ||||    
T  38193510 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 38193589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 304
Target Start/End: Original strand, 41979352 - 41979431
Alignment:
Q  225 aaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttga 304  Q
    ||||||||||| ||| ||||||||||||| |||| ||||| ||| |||||||||   | |||||||||||||||| ||||    
T  41979352 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 41979431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 304
Target Start/End: Complemental strand, 46308896 - 46308817
Alignment:
Q  225 aaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttga 304  Q
    ||||||||||| ||| ||||||||||||| |||| ||||| ||| |||||||||   | |||||||||||||||| ||||    
T  46308896 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 46308817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 304
Target Start/End: Original strand, 53094273 - 53094352
Alignment:
Q  225 aaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttga 304  Q
    ||||||||||| ||| ||||||||||||| |||| ||||| ||| |||||||||   | |||||||||||||||| ||||    
T  53094273 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 53094352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 304
Target Start/End: Complemental strand, 2660335 - 2660222
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    ||||||||| ||||   ||||||||| |||||  ||||||| ||| ||| ||||||||||||| |||| ||||| ||| |||| ||||   | |||||||    
T  2660335 ttggacggagggacgaatttgatggacgtctgtaaaattcaaggactaatttgatatttcgcaaaattcagggacgaaattggtcgatttttcaaaattc 2660236  T
Q  291 aaggacgaagttga 304  Q
    ||||||||| ||||    
T  2660235 aaggacgaatttga 2660222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 304
Target Start/End: Complemental strand, 3150341 - 3150262
Alignment:
Q  225 aaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttga 304  Q
    ||||||||||| ||| ||||||||||||| |||| ||||| ||| ||| |||||   | |||||||||||||||| ||||    
T  3150341 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttga 3150262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 304
Target Start/End: Original strand, 54900074 - 54900153
Alignment:
Q  225 aaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttga 304  Q
    |||||||||||  || ||||||||||||| |||| ||||| ||| |||||||||   | |||||||||||||||| ||||    
T  54900074 aaattcagggacaaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 54900153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 299
Target Start/End: Complemental strand, 23291659 - 23291585
Alignment:
Q  225 aaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaa 299  Q
    |||||||| || ||| | ||||||||||| |||| ||||| |||||||||||||   | ||||||||||||||||    
T  23291659 aaattcagagactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaa 23291585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 275
Target Start/End: Complemental strand, 53092712 - 53092662
Alignment:
Q  225 aaattcagggattaagttgatatttcgcataattgagggatgaatttggcc 275  Q
    ||||||||||||||| ||||||||||||| |||| ||||| ||| ||||||    
T  53092712 aaattcagggattaatttgatatttcgcaaaattcagggacgaaattggcc 53092662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 54092821 - 54092765
Alignment:
Q  179 ctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattcaggga 235  Q
    ||||||||||| ||||||||||||||  |||||||||| || ||  |||||||||||    
T  54092821 ctaacagagcatttggacggaaggactattttgatggacgtttgttaaattcaggga 54092765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 132; Significance: 2e-68; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 85 - 311
Target Start/End: Original strand, 18728496 - 18728723
Alignment:
Q  85 ttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-ctaac 183  Q
    ||||| ||||||||||||||||||||| ||||||||||||| |||| |||||| ||||||||||||| |||||||| || |||| ||||||| | |||||    
T  18728496 ttttccaattcaatcaaattagtcccttaacacgtggcttccttcttgccacgtgtacaagacaacacagcatgcaaggtgacagatcagcaaggctaac 18728595  T
Q  184 agagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgta 283  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||||| ||| ||||||||   ||     
T  18728596 agagcacttggacggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattaagggacgaagttggccgacaagtg 18728695  T
Q  284 aaaattcaaggacgaagttgatggttca 311  Q
    |||||||| ||||||| |||||||||||    
T  18728696 aaaattcagggacgaatttgatggttca 18728723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 81 - 311
Target Start/End: Complemental strand, 35395565 - 35395336
Alignment:
Q  81 aactttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-c 179  Q
    ||||||||| |||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||   |||||| ||||||||||||||||| |    
T  35395565 aactttttccaattcaatcaaattagtccctgaacatgtggcttccttcttgccacgcgtacaagacaacac--catgcaaggcgacatatcagcatggc 35395468  T
Q  180 taacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatc 279  Q
    |||||||||||||||||||| |||||||||||||||| |||| ||||||||||| | ||| |||||||||||||||||||||||| ||| ||||||||      
T  35395467 taacagagcacttggacggagggacctttttgatggacgtctaacaaattcaggaactaaattgatatttcgcataattgagggacgaagttggccgacg 35395368  T
Q  280 cgtaaaaattcaaggacgaagttgatggttca 311  Q
     || |||||||| ||| ||| |||||||||||    
T  35395367 tgtgaaaattcagggatgaatttgatggttca 35395336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 85 - 311
Target Start/End: Complemental strand, 32087744 - 32087517
Alignment:
Q  85 ttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-ctaac 183  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||| ||||| | ||||||| | |||||    
T  32087744 ttttccaattcaatcaaattagtccctgaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaaggcgatagatcagcaaggctaac 32087645  T
Q  184 agagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgta 283  Q
    |||||||||||||||| |||||||||||||||| |||||| ||||| ||||| |||||||||||||||||||||| ||||| ||| |||  |||  |||     
T  32087644 agagcacttggacggagggacctttttgatggacgtctgaaaaattaagggactaagttgatatttcgcataattaagggacgaagttgatcgacgcgtg 32087545  T
Q  284 aaaattcaaggacgaagttgatggttca 311  Q
    |||||||| ||||||| |||||||||||    
T  32087544 aaaattcagggacgaatttgatggttca 32087517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 97 - 311
Target Start/End: Original strand, 43317966 - 43318181
Alignment:
Q  97 atcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-ctaacagagcacttgga 195  Q
    ||||||||||||| ||||||||||||||| || | |||||  |||||||||| || | |||||  ||||||||||| ||||| |||||||||||||||||    
T  43317966 atcaaattagtccttgaacacgtggcttcctttttgccacatgtacaagacagcacaacatgctgggcgacatatcggcatggctaacagagcacttgga 43318065  T
Q  196 cggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaagga 295  Q
    |||| |||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||    
T  43318066 cggagggaccttttttatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgattttggccgacccataaaaattcaagga 43318165  T
Q  296 cgaagttgatggttca 311  Q
    |||| |||||||||||    
T  43318166 cgaatttgatggttca 43318181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 91 - 311
Target Start/End: Complemental strand, 33256624 - 33256403
Alignment:
Q  91 aattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-ctaacagagca 189  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||| |||||||| || |||| ||||||| | ||||| ||| |    
T  33256624 aattcaatcaaattagtccctgaacacgtggcttccttcttgccactcgtacaagacaacacagcatgcaaggtgacagatcagcaaggctaacggagga 33256525  T
Q  190 cttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaatt 289  Q
    |||||||||| |||| ||||||||||| ||||||||||||||  ||||||||||||||||||||||||||| ||||||| ||||||||   |||||||||    
T  33256524 cttggacggagggacttttttgatggacgtctgacaaattcaaagattaagttgatatttcgcataattgaaggatgaagttggccgacgtgtaaaaatt 33256425  T
Q  290 caaggacgaagttgatggttca 311  Q
    || ||||||| |||||||||||    
T  33256424 cagggacgaatttgatggttca 33256403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 78 - 311
Target Start/End: Original strand, 38177980 - 38178214
Alignment:
Q  78 ttgaactttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcat 177  Q
    |||||||||||  || |||||||| ||||||| |||||||||| |||| || | || ||| ||||||||||||| |||||||| | ||||||||||||||    
T  38177980 ttgaacttttttcaaatcaatcaagttagtccttgaacacgtgacttcctttttgctacgtgtacaagacaacacagcatgcaggacgacatatcagcat 38178079  T
Q  178 g-ctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccg 276  Q
    | ||||| |||||| |||||| | |||||||||||||||| |||||||||||||||  | ||| |||||||||||||||||||||||||||||||| |||    
T  38178080 ggctaacggagcacatggacgaagggacctttttgatggacgtctgacaaattcagatactaaattgatatttcgcataattgagggatgaatttgaccg 38178179  T
Q  277 atccgtaaaaattcaaggacgaagttgatggttca 311  Q
    | |||| |||||| ||||||||| ||||| |||||    
T  38178180 acccgtgaaaatttaaggacgaatttgatagttca 38178214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 78 - 311
Target Start/End: Original strand, 38205204 - 38205438
Alignment:
Q  78 ttgaactttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcat 177  Q
    |||||||||||  || |||||||| ||||||| |||||||||| |||| || | || ||| ||||||||||||| |||||||| | ||||||||||||||    
T  38205204 ttgaacttttttcaaatcaatcaagttagtccttgaacacgtgacttcctttttgctacgtgtacaagacaacacagcatgcaggacgacatatcagcat 38205303  T
Q  178 g-ctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccg 276  Q
    | ||||| |||||| |||||| | |||||||||||||||| |||||||||||||||  | ||| |||||||||||||||||||||||||||||||| |||    
T  38205304 ggctaacggagcacatggacgaagggacctttttgatggacgtctgacaaattcagatactaaattgatatttcgcataattgagggatgaatttgaccg 38205403  T
Q  277 atccgtaaaaattcaaggacgaagttgatggttca 311  Q
    | |||| |||||| ||||||||| ||||| |||||    
T  38205404 acccgtgaaaatttaaggacgaatttgatagttca 38205438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 97 - 311
Target Start/End: Original strand, 35292288 - 35292502
Alignment:
Q  97 atcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcat-gctaacagagcacttgga 195  Q
    ||||||||||||| ||||||||| ||||| || | |||||| |||||||||| || | ||||   ||||||| ||||| || |||||| ||||| |||||    
T  35292288 atcaaattagtccttgaacacgtagcttcctttttgccacgtgtacaagacagcacaacatgttgggcgacagatcagaatagctaacggagcatttgga 35292387  T
Q  196 cggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaagga 295  Q
    |||| | |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||| | || ||||||||||||||    
T  35292388 cggaggaaccttttttatggacgtctgacaaattcagggactaagttgatatttcgcataattgaaggatgattttggcc-acccataaaaattcaagga 35292486  T
Q  296 cgaagttgatggttca 311  Q
    |||| |||||||||||    
T  35292487 cgaatttgatggttca 35292502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 178 - 311
Target Start/End: Complemental strand, 38597004 - 38596871
Alignment:
Q  178 gctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccga 277  Q
    |||||| || ||||||||| ||| ||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  38597004 gctaacggaacacttggacagaaagacctttttgatggacgtctaacaaattcagggactaagttgatatttcgcataattgagggacgaatttggccga 38596905  T
Q  278 tccgtaaaaattcaaggacgaagttgatggttca 311  Q
     || |||||||||||||||||| |||||||||||    
T  38596904 cccataaaaattcaaggacgaatttgatggttca 38596871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 103 - 247
Target Start/End: Complemental strand, 38597157 - 38597012
Alignment:
Q  103 ttagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-ctaacagagcacttggacggaag 201  Q
    ||||||| |||||||| |||||| |||| |||||| ||||||||||||| |||||||| ||||||| ||||||| | ||||| || ||||||||| || |    
T  38597157 ttagtccttgaacacgcggcttccttcttgccacgtgtacaagacaacacagcatgcagggcgacagatcagcacggctaacggaacacttggacagagg 38597058  T
Q  202 gacctttttgatggatgtctgacaaattcagggattaagttgatat 247  Q
    ||||||||||||||| |||||||||||| ||||| |||||||||||    
T  38597057 gacctttttgatggacgtctgacaaattaagggactaagttgatat 38597012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 32089925 - 32090013
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||| |||||||| ||||||||||||| |||||||||||||| ||||    
T  32089925 acaaattcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcagggacgaagttgatgattca 32090013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 134 - 296
Target Start/End: Complemental strand, 24496924 - 24496761
Alignment:
Q  134 cacgcgtacaagacaacaaagcatgcatggcgacatatcagca-tgctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattcag 232  Q
    |||| |||| |||||||| |||||||| | ||||| ||||||| |  ||||||| || ||||||||| ||||| |||||||| | |||| ||||||||||    
T  24496924 cacgtgtacgagacaacatagcatgcaggacgacagatcagcaatagtaacagaacatttggacggatggaccattttgatgaacgtctcacaaattcag 24496825  T
Q  233 ggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggac 296  Q
    ||||||| |||||||||| |||||||||||||  |||||| ||||| |||| ||||| ||||||    
T  24496824 ggattaatttgatatttcacataattgagggacaaatttgaccgattcgtacaaatttaaggac 24496761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 78 - 254
Target Start/End: Original strand, 32838387 - 32838567
Alignment:
Q  78 ttgaactttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcat 177  Q
    |||||||||||| || ||| |||||||| ||| ||||||||||||||| |||| || | | ||||||||||||| |||||| | | |||||||||| |||    
T  32838387 ttgaactttttccaaatcattcaaattattccttgaacacgtggcttccttcttgctatgtgtacaagacaacacagcatgtaggacgacatatcaacat 32838486  T
Q  178 g-ctaacagagcacttggacggaaggaccttt---ttgatggatgtctgacaaattcagggattaagttgatatttcgcat 254  Q
    | ||||| |||||||| ||| ||| |||||||   || ||||  |||||||||||||||  ||||||||||||||||||||    
T  32838487 gactaacggagcactttgacagaaagaccttttaattaatggtcgtctgacaaattcagaaattaagttgatatttcgcat 32838567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 40330515 - 40330603
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||||||||||| |||||||||||||||||||||||| || ||||||||| |||| |||||||| |||||||||||||| ||||    
T  40330515 acaaattcagggattaaattgatatttcgcataattgagggacgattttggccgacccgtgaaaattcagggacgaagttgatgattca 40330603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 223 - 306
Target Start/End: Original strand, 33257760 - 33257843
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatg 306  Q
    ||||||||||||||||| |||||||||||||||||| ||||| ||| |||||||| ||||||||||||| ||||||||||||||    
T  33257760 acaaattcagggattaaattgatatttcgcataattaagggacgaagttggccgacccgtaaaaattcagggacgaagttgatg 33257843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 225 - 311
Target Start/End: Complemental strand, 32835965 - 32835879
Alignment:
Q  225 aaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||||||||| |||||||||||||||||| ||||| ||||||| |||| |||| |||||||| |||||||||||||| ||||    
T  32835965 aaattcagggattaaattgatatttcgcataattaagggacgaatttgaccgacccgtgaaaattcagggacgaagttgatgattca 32835879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 97 - 304
Target Start/End: Complemental strand, 17574535 - 17574328
Alignment:
Q  97 atcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-ctaacagagcacttgga 195  Q
    ||||| ||||||| || |||||||||| | || | | |||| ||||||||||||| |||||||| || ||||  ||| ||   ||||| ||||  |||||    
T  17574535 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaagg-gacacgtcatcaccactaacggagcttttgga 17574437  T
Q  196 cggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaagga 295  Q
    |||| ||||| |||||||||| |||||  ||||||||||| ||| | ||||||||||| |||| ||||| |||||||||||||   | ||||||||||||    
T  17574436 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaagga 17574337  T
Q  296 cgaagttga 304  Q
    |||| ||||    
T  17574336 cgaatttga 17574328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 35291139 - 35291051
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||||||||||| |||||||||| |||| ||||||||||||||||||||| |||| |||||||| ||||||  |||||| ||||    
T  35291139 acaaattcagggattaaattgatatttcacatagttgagggatgaatttggccgaaccgtgaaaattcagggacgacattgatgattca 35291051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 42619380 - 42619292
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    |||||||| |||||||| |||||||||||||||||||||||| ||| ||| |||| |||| |||||||| |||||||||||||| ||||    
T  42619380 acaaattctgggattaaattgatatttcgcataattgagggacgaaattgaccgacccgtgaaaattcagggacgaagttgatgattca 42619292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 223 - 303
Target Start/End: Complemental strand, 38176723 - 38176643
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttg 303  Q
    ||||||||||||||||| |||||||||||||||||| ||||| |||||||||| | || | |||||||| |||||||||||    
T  38176723 acaaattcagggattaaattgatatttcgcataattaagggacgaatttggccaacccatgaaaattcagggacgaagttg 38176643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 223 - 303
Target Start/End: Complemental strand, 38203947 - 38203867
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttg 303  Q
    ||||||||||||||||| |||||||||||||||||| ||||| |||||||||| | || | |||||||| |||||||||||    
T  38203947 acaaattcagggattaaattgatatttcgcataattaagggacgaatttggccaacccatgaaaattcagggacgaagttg 38203867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 191 - 296
Target Start/End: Complemental strand, 2179910 - 2179805
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    ||||||||| ||||| ||||||||||||||||  ||||||||||||||| | |||||||| || |||| ||||| ||||||| |||||   | |||||||    
T  2179910 ttggacggagggaccattttgatggatgtctgtaaaattcagggattaaatagatatttcacaaaattcagggacgaatttgaccgattttttaaaattc 2179811  T
Q  291 aaggac 296  Q
    ||||||    
T  2179810 aaggac 2179805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 191 - 304
Target Start/End: Original strand, 36057614 - 36057727
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    ||||||||| ||||| |||||||||| |||||  ||||||||||  ||| | ||||||||||| |||| ||||| |||||||||||||   | |||||||    
T  36057614 ttggacggagggaccattttgatggacgtctgtaaaattcagggtctaaatagatatttcgcaaaattcagggacgaatttggccgatttttgaaaattc 36057713  T
Q  291 aaggacgaagttga 304  Q
    ||||||||| ||||    
T  36057714 aaggacgaatttga 36057727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 304
Target Start/End: Original strand, 18624914 - 18625122
Alignment:
Q  97 atcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagca-tgctaacagagcacttgga 195  Q
    ||||||||||||| || |||||||| | | || | | |||| ||| ||||||||| | |||||| |  |||| |||| || | ||||| ||||  |||||    
T  18624914 atcaaattagtccttgtacacgtggttgccttgttgacacgtgtataagacaacacaacatgcaagaagacacatcatcactactaacggagcttttgga 18625013  T
Q  196 cggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaagga 295  Q
    |||||||||| |||||||||| |  ||  ||||||||||| ||| | |||||||| || |||| ||||| |||||| || |||| || ||||||||||||    
T  18625014 cggaaggaccattttgatggacgagtgtaaaattcagggactaaatagatatttcacaaaattcagggacgaatttagctgatcagtgaaaattcaagga 18625113  T
Q  296 cgaagttga 304  Q
    |||| ||||    
T  18625114 cgaatttga 18625122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 18726656 - 18726568
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||| ||||| ||| |||||||||||||||||||||||| ||| ||||   | ||||||||||||| |||||||||||||| ||||    
T  18726656 acaaattaagggactaaattgatatttcgcataattgagggacgaagttggggaacccgtaaaaattcagggacgaagttgatgattca 18726568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 24232243 - 24232159
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgt-aaaaattcaaggacgaagttgatg 306  Q
    ||||||||||  ||||  |||||||||| ||||||||||| |||||||| |||||||| | ||||||||||||||||||||||||    
T  24232243 acaaattcagaaattagattgatatttcacataattgaggaatgaattttgccgatccataaaaaattcaaggacgaagttgatg 24232159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 311
Target Start/End: Original strand, 24498065 - 24498155
Alignment:
Q  221 tgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||||||||| ||| ||||| | ||||||||||||||||||| |||| ||||||| |  ||||||| |||||||||| ||| ||||    
T  24498065 tgacaaattcagggactaatttgatttatcgcataattgagggatgattttgaccgatccttgcaaattcacggacgaagttaatgattca 24498155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 304
Target Start/End: Complemental strand, 7267966 - 7267853
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    ||||||||| ||| | |||||||||| |||||  ||||||||||| ||| | ||||||||||| |||| || || |||||||| ||||   | |||||||    
T  7267966 ttggacggagggatcattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagtgacgaatttggacgattttttaaaattc 7267867  T
Q  291 aaggacgaagttga 304  Q
    ||||||||| ||||    
T  7267866 aaggacgaatttga 7267853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 304
Target Start/End: Original strand, 30468281 - 30468394
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    ||||||||| ||||| |||||||||| |||||  ||||||| ||| ||| | ||||||||||| ||||||| || ||||||| || ||   | |||||||    
T  30468281 ttggacggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattgagagacgaatttgaccaattttttaaaattc 30468380  T
Q  291 aaggacgaagttga 304  Q
    ||||||||| ||||    
T  30468381 aaggacgaaattga 30468394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 304
Target Start/End: Complemental strand, 34327770 - 34327645
Alignment:
Q  179 ctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgat 278  Q
    ||||||||||  |||||||||  |||| |||||||||| |||||  ||||||||||| ||| | ||||||||||| |||| || || |||||||||| ||    
T  34327770 ctaacagagcttttggacggagagaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagcgacgaatttggccaat 34327671  T
Q  279 ccgtaaaaattcaaggacgaagttga 304  Q
         |||||||||||||||| ||||    
T  34327670 tttagaaaattcaaggacgaatttga 34327645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 296
Target Start/End: Original strand, 42473608 - 42473713
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    ||||||||||||||   ||||||||| |||||  ||||||||||| ||  ||||||||||| |||||| ||||| ||| |||||||||   | |||||||    
T  42473608 ttggacggaaggactgatttgatggacgtctgtaaaattcagggactattttgatatttcgaataattcagggacgaaattggccgatttttcaaaattc 42473707  T
Q  291 aaggac 296  Q
    ||||||    
T  42473708 aaggac 42473713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 43316871 - 43316822
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttg 272  Q
    ||||||||||||||||| ||||||||||||||| |||| |||||||||||    
T  43316871 acaaattcagggattaaattgatatttcgcatagttgaaggatgaatttg 43316822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 208 - 304
Target Start/End: Original strand, 24541230 - 24541326
Alignment:
Q  208 tttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttga 304  Q
    ||||||||| |||||  ||||||||||| ||| ||||||||||||| |||| ||||| ||| |||||||||   | ||||||||| |||||| ||||    
T  24541230 tttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaatgacgaatttga 24541326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 304
Target Start/End: Original strand, 12738736 - 12738815
Alignment:
Q  225 aaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttga 304  Q
    ||||||||||| ||| | ||||||||||| |||| ||| | |||||||||||||   | |||||||||||||||| ||||    
T  12738736 aaattcagggactaaatagatatttcgcaaaattcaggtacgaatttggccgattttttaaaattcaaggacgaatttga 12738815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 304
Target Start/End: Original strand, 12801559 - 12801638
Alignment:
Q  225 aaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttga 304  Q
    ||||||||||| ||| | ||||||||||| |||| ||| | |||||||||||||   | |||||||||||||||| ||||    
T  12801559 aaattcagggactaaatagatatttcgcaaaattcaggtacgaatttggccgattttttaaaattcaaggacgaatttga 12801638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 278
Target Start/End: Original strand, 29621782 - 29621869
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgat 278  Q
    ||||||||| ||||   ||||||||| |||||  ||||||||||| ||| ||||||||||| | |||| ||||| ||| |||||||||    
T  29621782 ttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgat 29621869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 304
Target Start/End: Complemental strand, 30463989 - 30463910
Alignment:
Q  225 aaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttga 304  Q
    ||||||||||| ||| | ||||||||||| |||| ||||| ||||||| |||||   | |||||||||||||||| ||||    
T  30463989 aaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttga 30463910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 126; Significance: 6e-65; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 79 - 311
Target Start/End: Complemental strand, 29077564 - 29077331
Alignment:
Q  79 tgaactttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg 178  Q
    ||||||||||| || ||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||| |||||||| |||||||| ||||||||    
T  29077564 tgaactttttccaaatcaatcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaaggcgacatgtcagcatg 29077465  T
Q  179 -ctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccga 277  Q
     ||||| |||| | |  ||||| |||||||||||||||| ||||||||||||||||||| || |||| |||||||||||||||||||  |||||||||||    
T  29077464 gctaacggagcccgttaacggagggacctttttgatggacgtctgacaaattcagggatgaaattgaaatttcgcataattgagggactaatttggccga 29077365  T
Q  278 tccgtaaaaattcaaggacgaagttgatggttca 311  Q
      ||| |||||||| ||||||| |||||||||||    
T  29077364 cgcgtgaaaattcagggacgaatttgatggttca 29077331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 79 - 311
Target Start/End: Complemental strand, 4641591 - 4641358
Alignment:
Q  79 tgaactttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg 178  Q
    ||||||||||| || ||||||||||| |||||||||||||||||||| |||| ||||||||||||||||| || |||||||| ||  |||| ||||||||    
T  4641591 tgaactttttccaaatcaatcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaagacagcacagcatgcaaggaaacatgtcagcatg 4641492  T
Q  179 -ctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccga 277  Q
     ||||| |||| | |  ||||| |||||||||||||||| |||||| ||||||||||||||| |||||||||| ||||||||||||| ||||||||||||    
T  4641491 gctaacggagcccgttaacggagggacctttttgatggaggtctgataaattcagggattaaattgatatttcacataattgagggacgaatttggccga 4641392  T
Q  278 tccgtaaaaattcaaggacgaagttgatggttca 311  Q
     |||| |||||||| |||| || |||||||||||    
T  4641391 cccgtgaaaattcagggactaaattgatggttca 4641358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 79 - 311
Target Start/End: Complemental strand, 29112536 - 29112303
Alignment:
Q  79 tgaactttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg 178  Q
    ||||||||||| || ||||||||||| |||||||||||||||||||| |||| |||||||||||| |||| || |||||||  |||||||| ||||||||    
T  29112536 tgaactttttccaaatcaatcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaggacagcacagcatgccaggcgacatgtcagcatg 29112437  T
Q  179 -ctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccga 277  Q
     ||||| |||| | |  ||||| |||||||||||||||| ||||||||||||||||||| || |||| |||||||||||||||||||  |||||||||||    
T  29112436 gctaacggagcccgttaacggagggacctttttgatggacgtctgacaaattcagggatgaaattgaaatttcgcataattgagggactaatttggccga 29112337  T
Q  278 tccgtaaaaattcaaggacgaagttgatggttca 311  Q
      ||| |||||||| |||| || |||||||||||    
T  29112336 cgcgtgaaaattcagggactaacttgatggttca 29112303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 97 - 303
Target Start/End: Original strand, 3018338 - 3018545
Alignment:
Q  97 atcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-ctaacagagcacttgga 195  Q
    |||||||| ||||||||||| ||||||||  ||| |||||||||||||||||||| | |||||| | ||| | |||| |||| ||||| |||||||||||    
T  3018338 atcaaattcgtccctgaacatgtggcttccgtcttgccacgcgtacaagacaacacatcatgcaagacgatagatcaacatggctaacggagcacttgga 3018437  T
Q  196 cggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaagga 295  Q
     ||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||  ||| |||||||| |||    
T  3018438 tggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggacgaagttggccgacgcgtgaaaattcaggga 3018537  T
Q  296 cgaagttg 303  Q
    ||||||||    
T  3018538 cgaagttg 3018545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 79 - 311
Target Start/End: Complemental strand, 2968375 - 2968142
Alignment:
Q  79 tgaactttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg 178  Q
    ||||| ||||| || ||||||||||| ||| |||||||||||||||| |||| ||||||||||||||||| || | |||||| |||||||| |||||| |    
T  2968375 tgaacattttccaaatcaatcaaattcgtctctgaacacgtggcttccttcttgccacgcgtacaagacagcacaacatgcaaggcgacatgtcagcacg 2968276  T
Q  179 -ctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccga 277  Q
     ||||| |||| | |  ||||| |||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||  ||    
T  2968275 gctaacggagcccgttaacggatggacctttttgatggacgtctgataaattcagggattaaattgatatttcgcataattgagggacgaatttgggaga 2968176  T
Q  278 tccgtaaaaattcaaggacgaagttgatggttca 311  Q
     |||| |||||| | |||| || |||||||||||    
T  2968175 cccgtgaaaattgagggactaaattgatggttca 2968142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 17950652 - 17950564
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||| |||||||| ||||||||||||| ||| ||| |||||||||||    
T  17950652 acaaattcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcagggatgaaattgatggttca 17950564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 4646216 - 4646304
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||| ||||||||| |||||||||||||||||||| ||| ||||||  |||||||||||||||||| |||  ||||||||||||||    
T  4646216 acaaatttagggattaaattgatatttcgcataattgatggacgaatttaaccgatccgtaaaaattcagggattaagttgatggttca 4646304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 30639702 - 30639614
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    |||||||||  |||||| ||||||||| ||||||||||||||  ||||||||||| |||| |||||||| |||||||||||||| ||||    
T  30639702 acaaattcatagattaaattgatattttgcataattgagggactaatttggccgacccgtgaaaattcagggacgaagttgatgattca 30639614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 35174482 - 35174394
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||||  ||||| ||||||||||| |||||||||  | ||| |||||||| ||||||||||||| |||||||||||||| ||||    
T  35174482 acaaattcagaaattaaattgatatttcgtataattgagaaacgaagttggccgacccgtaaaaattcagggacgaagttgatgattca 35174394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 299
Target Start/End: Original strand, 13613583 - 13613691
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    ||||||||| ||||   ||||||||| |||||  ||||||||||| ||| ||||||||||||| |||| ||||| ||||||| |||||   | |||||||    
T  13613583 ttggacggagggactaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaatttgaccgatttttcaaaattc 13613682  T
Q  291 aaggacgaa 299  Q
    |||||||||    
T  13613683 aaggacgaa 13613691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 29114776 - 29114864
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    |||||||||||||| || |||| ||||||||||||||| |||  |||||||||||  ||| |||||||| |||| || |||||||||||    
T  29114776 acaaattcagggatgaaattgaaatttcgcataattgaaggactaatttggccgacgcgtgaaaattcagggactaacttgatggttca 29114864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 31210440 - 31210528
Alignment:
Q  223 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||||||||||||||| | || ||||||||||||||| ||||| || |||| ||||||| || ||||||||| |||||| ||||| ||||    
T  31210440 acaaattcagggatttatttaatatttcgcataattaagggacgattttgaccgatccttacaaattcaagaacgaagctgatgattca 31210528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 278
Target Start/End: Original strand, 32439092 - 32439179
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgat 278  Q
    ||||||||| ||||| |||||||||| |||||  ||||||||||| ||| | ||||||||||| |||| ||||| ||||||| |||||    
T  32439092 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccgat 32439179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 304
Target Start/End: Original strand, 32518497 - 32518576
Alignment:
Q  225 aaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttga 304  Q
    ||||||||||| ||| ||||||||||||| |||| ||||||||| |||||||||   | |||||||||||||||| ||||    
T  32518497 aaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccgatttttcaaaattcaaggacgaatttga 32518576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 209 - 311
Target Start/End: Original strand, 35175882 - 35175984
Alignment:
Q  209 ttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggt 308  Q
    |||||||| |||  ||||||||||||| ||  |||||||||||   ||||  | || ||||||||||||||| | |||||||||||||||| ||||||||    
T  35175882 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggagacgaatttggccgatccctgaaaattcaaggacgaaattgatggt 35175981  T
Q  309 tca 311  Q
    |||    
T  35175982 tca 35175984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 195 - 303
Target Start/End: Original strand, 14338480 - 14338588
Alignment:
Q  195 acggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaagg 294  Q
    ||||| ||||| |||||||||| |||||  |||||||||||| || | || |||||||| ||||   ||| ||||||||| |||   |||||||||||||    
T  14338480 acggagggaccattttgatggacgtctgtgaaattcagggatgaattagacatttcgcaaaatttgaggacgaatttggctgatttttaaaaattcaagg 14338579  T
Q  295 acgaagttg 303  Q
    |||||||||    
T  14338580 acgaagttg 14338588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 199 - 311
Target Start/End: Complemental strand, 24662595 - 24662483
Alignment:
Q  199 aaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacga 298  Q
    |||||| ||||| ||||| |||||||||||||| ||| ||  |||||||||||   ||||| |||| ||||||| |  || |||  ||||||||||||||    
T  24662595 aaggacattttttatggacgtctgacaaattcatggactattttgatatttcgttaaattgggggacgaatttgacatattcgtgcaaattcaaggacga 24662496  T
Q  299 agttgatggttca 311  Q
    |||||||| ||||    
T  24662495 agttgatgattca 24662483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 179 - 311
Target Start/End: Complemental strand, 30891259 - 30891127
Alignment:
Q  179 ctaacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgat 278  Q
    |||| |||||| ||||||||| ||||   |||| |||| |||||||||||||||||| |||    |||||| |||||||| | |||| |||||| |||||    
T  30891259 ctaatagagcatttggacggagggactactttgttggacgtctgacaaattcagggactaaacgtatattttgcataatttaaggataaatttgaccgat 30891160  T
Q  279 ccgtaaaaattcaaggacgaagttgatggttca 311  Q
     |||| |||||| || ||||| |||||| ||||    
T  30891159 tcgtacaaattctagaacgaaattgatgattca 30891127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 278
Target Start/End: Complemental strand, 20523489 - 20523402
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgat 278  Q
    ||||||||| ||||| |||||||||| |||||  ||||||||||| ||| | ||||||||||| |||| | ||| ||||||| |||||    
T  20523489 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgaatttgaccgat 20523402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 311
Target Start/End: Original strand, 17952061 - 17952163
Alignment:
Q  209 ttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttgatggt 308  Q
    |||||||| |||  ||||||||||||| ||  |||||||||||   ||||  |||| |||||||||||| || | |||||||| ||||||| ||||||||    
T  17952061 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccgacccctgaaaattcagggacgaaattgatggt 17952160  T
Q  309 tca 311  Q
    |||    
T  17952161 tca 17952163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 296
Target Start/End: Complemental strand, 3456871 - 3456766
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    ||||||||| ||||   ||||||||| |||||  ||||||||||| ||| ||||||||||| | |||| ||||| ||| |||||||||   | |||||||    
T  3456871 ttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattc 3456772  T
Q  291 aaggac 296  Q
    ||||||    
T  3456771 aaggac 3456766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 81 - 124
Target Start/End: Original strand, 30641219 - 30641262
Alignment:
Q  81 aactttttcaaattcaatcaaattagtccctgaacacgtggctt 124  Q
    |||||||||||||||||||||||||||||  ||||| |||||||    
T  30641219 aactttttcaaattcaatcaaattagtcctcgaacatgtggctt 30641262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 292
Target Start/End: Original strand, 7372959 - 7373060
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    ||||||||| ||||| |||||||||| | |||  ||||||||||| ||| |  |||||||||| |||| ||||| ||||||| || ||   |||||||||    
T  7372959 ttggacggagggaccattttgatggacgcctgtaaaattcagggactaaataaatatttcgcaaaattcagggacgaatttgaccaatttttaaaaattc 7373058  T
Q  291 aa 292  Q
    ||    
T  7373059 aa 7373060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 81 - 311
Target Start/End: Original strand, 6524 - 6755
Alignment:
Q  81 aactttttcaaattcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagcatg-c 179  Q
    ||||||||| || ||||||||||| |||||||||||||||||||| |||| ||||||||||||||||| || |||||||| || ||||| |||||||| |    
T  6524 aactttttccaaatcaatcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaagacagcacagcatgcaaggtgacatgtcagcatggc 6623  T
Q  180 taacagagcacttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatc 279  Q
    |||| |||| | |  ||||| |||||||||||||||| |||||| ||||||||||||||| |||||||||| ||||||||||||| |||||||||||| |    
T  6624 taacggagcccgttaacggagggacctttttgatggaggtctgataaattcagggattaaattgatatttcacataattgagggacgaatttggccgacc 6723  T
Q  280 cgtaaaaattcaaggacgaagttgatggttca 311  Q
    ||| |||||||| |||| || |||||||||||    
T  6724 cgtgaaaattcagggactaaattgatggttca 6755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1041 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold1041
Description:

Target: scaffold1041; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 209 - 291
Target Start/End: Complemental strand, 2203 - 2121
Alignment:
Q  209 ttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattca 291  Q
    ||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  2203 ttgattgacgtctgacaaatttagggattaagttgatatttcgcataattgagggatgaatttggtcgatgcgtaaaaattca 2121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 304
Target Start/End: Complemental strand, 3417 - 3304
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    ||||||||| ||||   ||||||||| |||||  ||||||||||| ||| ||||||||||||| |||| |||||  || |||||||||   | |||||||    
T  3417 ttggacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacaaaattggccgatttttcaaaattc 3318  T
Q  291 aaggacgaagttga 304  Q
    ||||||||| ||||    
T  3317 aaggacgaatttga 3304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 304
Target Start/End: Complemental strand, 4589 - 4476
Alignment:
Q  191 ttggacggaaggacctttttgatggatgtctgacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattc 290  Q
    ||||||||| ||||   ||||||||| |||||  ||||||||||| ||| ||||||||||||| |||| |||||  || |||||||||   | |||||||    
T  4589 ttggacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacaaaattggccgatttttcaaaattc 4490  T
Q  291 aaggacgaagttga 304  Q
    ||||||||| ||||    
T  4489 aaggacgaatttga 4476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 304
Target Start/End: Original strand, 14343 - 14422
Alignment:
Q  225 aaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaagttga 304  Q
    ||||||||||| ||| ||||||||||||| |||| ||||| ||| || ||||||   | |||||||||||||||| ||||    
T  14343 aaattcagggactaatttgatatttcgcaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttga 14422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 93 - 216
Target Start/End: Complemental strand, 4681 - 4557
Alignment:
Q  93 ttcaatcaaattagtccctgaacacgtggcttctttctcgccacgcgtacaagacaacaaagcatgcatggcgacatatcagc-atgctaacagagcact 191  Q
    |||||||||||| |||| || |||||||||||| || | | |||| ||||||||||||||  |||||| | |||||  ||||| |  |||||||| || |    
T  4681 ttcaatcaaattggtccttgtacacgtggcttccttgtagacacgtgtacaagacaacaagccatgcaggacgacaactcagcaacactaacagaacatt 4582  T
Q  192 tggacggaaggacctttttgatgga 216  Q
    |||||||||||||  ||||||||||    
T  4581 tggacggaaggactattttgatgga 4557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University