View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7415_high_29 (Length: 308)

Name: NF7415_high_29
Description: NF7415
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7415_high_29
NF7415_high_29
[»] chr8 (1 HSPs)
chr8 (10-300)||(36363351-36363641)


Alignment Details
Target: chr8 (Bit Score: 287; Significance: 1e-161; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 10 - 300
Target Start/End: Original strand, 36363351 - 36363641
Alignment:
Q  10 gagtattactagtactatttaaccaccatcctaaaaaagatttgaatttcatccctgttacaaattcaaacgcttgctattgagctgctgacatttcatg 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36363351 gagtattactagtactatttaaccaccatcctaaaaaagatttgaatttcatccctgttacaaattcaaacgcttgctattgagctgctgacatttcatg 36363450  T
Q  110 gatcatgtttctaggtagttaaaataactggagggaatttattttctgaatttatcataataaattgacattcatttgaacattaaaattagtgcataat 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36363451 gatcatgtttctaggtagttaaaataactggagggaatttattttctgaatttatcataataaattgacattcatttgaacattaaaattagtgcataat 36363550  T
Q  210 atttagatttagatgcttatctgatcaactgaaagccagtgaaatataacataacaaatttaagataaaaacaaaatactaccagtataat 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  36363551 atttagatttagatgcttatctgatcaactgaaagccagtgaaatataacataacaaatttaaaataaaaacaaaatactaccagtataat 36363641  T

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