View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7415_low_25 (Length: 344)

Name: NF7415_low_25
Description: NF7415
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7415_low_25
NF7415_low_25
[»] chr3 (25 HSPs)
chr3 (16-327)||(4128650-4128946)
chr3 (94-181)||(48338805-48338892)
chr3 (94-191)||(49261762-49261859)
chr3 (94-187)||(38359033-38359126)
chr3 (91-187)||(54801361-54801457)
chr3 (91-189)||(6785825-6785924)
chr3 (91-177)||(44698214-44698300)
chr3 (94-176)||(50958857-50958939)
chr3 (93-160)||(29032425-29032492)
chr3 (91-162)||(4020109-4020180)
chr3 (94-173)||(55446733-55446811)
chr3 (91-181)||(11676767-11676857)
chr3 (94-172)||(31494039-31494117)
chr3 (94-173)||(26613099-26613179)
chr3 (98-181)||(635743-635826)
chr3 (91-161)||(40460239-40460309)
chr3 (97-191)||(42437753-42437845)
chr3 (93-134)||(25958092-25958133)
chr3 (91-183)||(25319453-25319545)
chr3 (91-183)||(33051579-33051671)
chr3 (91-173)||(28709597-28709679)
chr3 (115-160)||(12373022-12373066)
chr3 (94-183)||(34145939-34146027)
chr3 (91-128)||(48138103-48138140)
chr3 (106-170)||(53818829-53818893)
[»] chr2 (22 HSPs)
chr2 (97-190)||(41436308-41436401)
chr2 (94-191)||(40574177-40574274)
chr2 (91-173)||(4978783-4978865)
chr2 (91-173)||(4996691-4996773)
chr2 (91-173)||(13738426-13738508)
chr2 (91-191)||(6315869-6315969)
chr2 (93-171)||(18717852-18717930)
chr2 (91-164)||(40346717-40346790)
chr2 (94-182)||(42251598-42251686)
chr2 (94-191)||(4557553-4557651)
chr2 (94-191)||(8580494-8580591)
chr2 (94-189)||(28331288-28331384)
chr2 (91-182)||(13717169-13717259)
chr2 (93-175)||(29526334-29526416)
chr2 (93-183)||(31904256-31904345)
chr2 (93-170)||(18857437-18857514)
chr2 (91-190)||(23453327-23453427)
chr2 (91-189)||(1004806-1004903)
chr2 (94-191)||(3689653-3689748)
chr2 (91-173)||(43681302-43681384)
chr2 (94-140)||(32909439-32909485)
chr2 (94-170)||(17641177-17641253)
[»] chr8 (26 HSPs)
chr8 (91-188)||(44648969-44649066)
chr8 (94-191)||(600354-600451)
chr8 (91-184)||(17720209-17720304)
chr8 (94-188)||(20542372-20542466)
chr8 (94-188)||(27506980-27507074)
chr8 (119-191)||(23725684-23725756)
chr8 (94-189)||(1342306-1342400)
chr8 (94-189)||(41726880-41726975)
chr8 (94-164)||(42361548-42361618)
chr8 (94-181)||(6270184-6270271)
chr8 (94-173)||(10029162-10029241)
chr8 (94-181)||(40489842-40489929)
chr8 (91-173)||(35901447-35901529)
chr8 (103-164)||(23425310-23425371)
chr8 (91-191)||(3137382-3137482)
chr8 (93-173)||(32881113-32881193)
chr8 (93-171)||(18200714-18200792)
chr8 (112-160)||(10652793-10652841)
chr8 (93-181)||(18647494-18647581)
chr8 (94-173)||(13873697-13873776)
chr8 (103-160)||(547075-547132)
chr8 (91-148)||(3347542-3347598)
chr8 (94-187)||(11150909-11151001)
chr8 (91-148)||(44947372-44947429)
chr8 (91-128)||(25250345-25250382)
chr8 (94-134)||(600528-600568)
[»] chr1 (15 HSPs)
chr1 (91-189)||(8001778-8001876)
chr1 (91-182)||(17169301-17169392)
chr1 (94-180)||(26829485-26829571)
chr1 (91-160)||(10226493-10226562)
chr1 (91-160)||(27688492-27688561)
chr1 (91-192)||(37494157-37494253)
chr1 (110-188)||(34347560-34347638)
chr1 (93-182)||(33148164-33148253)
chr1 (91-191)||(13969130-13969230)
chr1 (94-189)||(5069481-5069575)
chr1 (91-171)||(46295902-46295982)
chr1 (93-179)||(38597474-38597560)
chr1 (94-179)||(30941503-30941588)
chr1 (91-189)||(8279720-8279818)
chr1 (138-179)||(17644831-17644872)
[»] chr5 (10 HSPs)
chr5 (91-182)||(27544580-27544671)
chr5 (91-191)||(30840629-30840728)
chr5 (93-180)||(30293856-30293943)
chr5 (91-181)||(11815903-11815993)
chr5 (94-184)||(27366005-27366095)
chr5 (94-191)||(22293966-22294063)
chr5 (92-170)||(41645037-41645113)
chr5 (91-149)||(36482075-36482133)
chr5 (94-175)||(6646286-6646367)
chr5 (125-191)||(34346886-34346953)
[»] chr7 (20 HSPs)
chr7 (93-183)||(12810180-12810270)
chr7 (93-191)||(34993161-34993259)
chr7 (96-181)||(30027956-30028041)
chr7 (91-182)||(37928291-37928382)
chr7 (91-189)||(19676979-19677077)
chr7 (91-181)||(16979934-16980024)
chr7 (94-182)||(23142686-23142775)
chr7 (93-160)||(8896631-8896698)
chr7 (122-191)||(1521263-1521332)
chr7 (94-175)||(25530579-25530660)
chr7 (96-189)||(41064341-41064434)
chr7 (91-171)||(42888305-42888385)
chr7 (94-189)||(31850782-31850878)
chr7 (94-173)||(31487744-31487823)
chr7 (91-182)||(43118797-43118888)
chr7 (94-173)||(16685731-16685812)
chr7 (94-173)||(17659967-17660048)
chr7 (91-175)||(43626345-43626429)
chr7 (93-148)||(23080658-23080713)
chr7 (91-187)||(7833775-7833871)
[»] chr6 (12 HSPs)
chr6 (95-189)||(32134030-32134124)
chr6 (99-175)||(8636783-8636859)
chr6 (118-188)||(31223180-31223251)
chr6 (110-189)||(27082295-27082374)
chr6 (91-190)||(227316-227417)
chr6 (91-148)||(33121342-33121399)
chr6 (94-173)||(2470351-2470430)
chr6 (94-173)||(5611163-5611242)
chr6 (94-160)||(19320305-19320372)
chr6 (94-184)||(17835010-17835100)
chr6 (91-171)||(19659645-19659725)
chr6 (91-161)||(18493255-18493325)
[»] chr4 (27 HSPs)
chr4 (91-176)||(12094955-12095040)
chr4 (92-160)||(19480550-19480618)
chr4 (91-187)||(39810734-39810829)
chr4 (91-181)||(28740277-28740367)
chr4 (95-180)||(2824851-2824936)
chr4 (91-178)||(31991489-31991576)
chr4 (93-161)||(22019615-22019683)
chr4 (94-173)||(20775072-20775151)
chr4 (94-185)||(27284060-27284151)
chr4 (95-154)||(44639887-44639946)
chr4 (110-181)||(48419065-48419136)
chr4 (95-175)||(13967842-13967923)
chr4 (91-177)||(55126809-55126896)
chr4 (91-173)||(12076459-12076541)
chr4 (94-154)||(31089819-31089878)
chr4 (91-143)||(42595215-42595267)
chr4 (94-173)||(27133549-27133628)
chr4 (94-145)||(31861462-31861513)
chr4 (94-140)||(37183071-37183117)
chr4 (94-143)||(3708722-3708771)
chr4 (94-191)||(28176758-28176854)
chr4 (91-159)||(2565442-2565510)
chr4 (94-190)||(16341136-16341232)
chr4 (110-181)||(52837317-52837388)
chr4 (93-130)||(22611930-22611967)
chr4 (91-159)||(44190235-44190301)
chr4 (109-170)||(46399841-46399902)
[»] scaffold0002 (1 HSPs)
scaffold0002 (91-175)||(120667-120751)
[»] scaffold0039 (1 HSPs)
scaffold0039 (91-178)||(30018-30105)
[»] scaffold0283 (1 HSPs)
scaffold0283 (91-148)||(3350-3407)
[»] scaffold0079 (1 HSPs)
scaffold0079 (94-190)||(51629-51725)
[»] scaffold0204 (1 HSPs)
scaffold0204 (91-173)||(15397-15479)
[»] scaffold0103 (1 HSPs)
scaffold0103 (96-171)||(28885-28962)
[»] scaffold0036 (1 HSPs)
scaffold0036 (91-140)||(36565-36614)


Alignment Details
Target: chr3 (Bit Score: 203; Significance: 1e-111; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 16 - 327
Target Start/End: Original strand, 4128650 - 4128946
Alignment:
Q  16 tgtgcaaacaacaaatacatagcggagaatccgcttcctcctgaatattttttagggtcttgctaaccattaccctgaaaatataagatgttatttttga 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||| ||||||||||    
T  4128650 tgtgcaaacaacaaatacatagcggagaatccgcttcctcctgaatattttttagg-tcttgttaaccattgccctgaaaatataagatattatttttga 4128748  T
Q  116 taaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttggggcactggagacactggttagcattctcctat 215  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||         ||| |||||||||||||||||    
T  4128749 taaagtaatgattacacaatattttcatgaaaacttacttgttttggatgcttaaccattgcccttgggg---------caccggttagcattctcctat 4128839  T
Q  216 taaaaaatagtaccttaatgcactacttagttaattaattaatgatctactttgtcacgttacccttaaaacaatcatttttgttaatcattgtttaatt 315  Q
    |    |||||||||||||||||||||||||    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4128840 t-tttaatagtaccttaatgcactacttag----ttaattaatgatccactttgtcacgttacccttaaaacaatcatttttgttaatcattgtttaatt 4128934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 94 - 181
Target Start/End: Complemental strand, 48338892 - 48338805
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgccctt 181  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||| || ||||| ||||||||||||||| |||||||||||||||    
T  48338892 aaatataagatgttatttttgataaagtaattattacacaacttttttataaaaacttacttgttttggatgcttaaccattgccctt 48338805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 94 - 191
Target Start/End: Complemental strand, 49261859 - 49261762
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttggggcactgg 191  Q
    ||||||||||||||| |||||||| |||||| |||||||||  ||||||||||||  ||||||||||||||| ||||||||||| ||||| |||||||    
T  49261859 aaatataagatgttacttttgatagagtaataattacacaattttttcatgaaaatgtacttgttttggatgcttaaccattgctcttggagcactgg 49261762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 94 - 187
Target Start/End: Complemental strand, 38359126 - 38359033
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttggggca 187  Q
    ||||||||||||||| |||||||||||||| |||||| || | ||||||||||||| ||||| |||| |||| |||||||||||||||| ||||    
T  38359126 aaatataagatgttaattttgataaagtaacgattacccatctttttcatgaaaacttacttattttagatgtttaaccattgcccttgaggca 38359033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 91 - 187
Target Start/End: Original strand, 54801361 - 54801457
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttggggca 187  Q
    |||||||||||||||||| ||||| ||||||||| |||||||||  ||||||| ||||| ||||| ||||| ||| ||||| |||||||||||||||    
T  54801361 tgaaaatataagatgttacttttgctaaagtaataattacacaattttttcataaaaacttacttattttgtatgcttaactattgcccttggggca 54801457  T

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Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 189
Target Start/End: Original strand, 6785825 - 6785924
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaac-attttcatgaaaacatacttgttttggatggttaaccattgcccttggggcact 189  Q
    ||||||||||| |||||| ||||||| |||||||||||||||| |  ||||||||||||| | |||||||| |||| ||||||| | |||||||||||||    
T  6785825 tgaaaatataaaatgttacttttgatcaagtaatgattacacatcttttttcatgaaaacttgcttgtttttgatgtttaaccaatacccttggggcact 6785924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 91 - 177
Target Start/End: Complemental strand, 44698300 - 44698214
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgc 177  Q
    |||||||||||||||||| |||||||||| ||||||||||||||  ||||||| ||||| || ||||||| |||  |||||||||||    
T  44698300 tgaaaatataagatgttacttttgataaaataatgattacacaattttttcataaaaacttatttgttttagatatttaaccattgc 44698214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 94 - 176
Target Start/End: Complemental strand, 50958939 - 50958857
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattg 176  Q
    |||||||| |||||||||||||| ||| |||||||||||||  ||||||| ||||| ||||||||||||||| |||| |||||    
T  50958939 aaatataacatgttatttttgatcaagaaatgattacacaattttttcataaaaacttacttgttttggatgcttaagcattg 50958857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 93 - 160
Target Start/End: Complemental strand, 29032492 - 29032425
Alignment:
Q  93 aaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgtttt 160  Q
    |||||||||||||||| ||||||| |||||||||||||||||| ||||||| ||||| | ||||||||    
T  29032492 aaaatataagatgttacttttgatcaagtaatgattacacaactttttcataaaaacttgcttgtttt 29032425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 4020180 - 4020109
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttgg 162  Q
    ||||||||||| |||||| ||||||| ||||||| |||||||||  ||||||| ||||| ||||||||||||    
T  4020180 tgaaaatataaaatgttaattttgattaagtaattattacacaattttttcataaaaacttacttgttttgg 4020109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 94 - 173
Target Start/End: Complemental strand, 55446811 - 55446733
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaacca 173  Q
    ||||||||||||||| |||| ||||||||||||||||||||| |||| || ||||| ||||| |||| |||| |||||||    
T  55446811 aaatataagatgttacttttaataaagtaatgattacacaac-tttttataaaaacttacttcttttagatgtttaacca 55446733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 91 - 181
Target Start/End: Original strand, 11676767 - 11676857
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgccctt 181  Q
    |||||||| |||| |||| ||||||| || ||||||| ||||||  ||||| ||||||| | ||||||||||||| ||||||| |||||||    
T  11676767 tgaaaataaaagacgttacttttgatcaaataatgataacacaattttttcttgaaaacttgcttgttttggatgtttaaccaatgccctt 11676857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 94 - 172
Target Start/End: Original strand, 31494039 - 31494117
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaacc 172  Q
    |||||||||| |||| |||| || || ||||||||||||||  ||||||| ||||| ||||||||||||||| ||||||    
T  31494039 aaatataagaagttaattttaatcaaataatgattacacaattttttcataaaaacttacttgttttggatgtttaacc 31494117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 173
Target Start/End: Original strand, 26613099 - 26613179
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacattttc-atgaaaacatacttgttttggatggttaacca 173  Q
    |||||||| ||||||||||| || ||||||| |||||| ||| ||||  |||||||| ||||||||||||||| |||||||    
T  26613099 aaatataaaatgttatttttaatcaagtaataattacataactttttttatgaaaacttacttgttttggatgcttaacca 26613179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 181
Target Start/End: Original strand, 635743 - 635826
Alignment:
Q  98 ataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgccctt 181  Q
    ||||||||||| ||||||| || ||||||||||||||| |||  || ||||| ||  ||||||||||| ||||||| |||||||    
T  635743 ataagatgttacttttgattaaataatgattacacaacttttcaataaaaacttatatgttttggatgcttaaccaatgccctt 635826  T

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Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 161
Target Start/End: Complemental strand, 40460309 - 40460239
Alignment:
Q  91 tgaaaatataagatgtt-atttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttg 161  Q
    ||||||||||||||||| | |||||||||| ||||||||||| || |||||||||||||| ||||| |||||    
T  40460309 tgaaaatataagatgtttacttttgataaa-taatgattacataatattttcatgaaaacttacttattttg 40460239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 191
Target Start/End: Original strand, 42437753 - 42437845
Alignment:
Q  97 tataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttggggcactgg 191  Q
    |||||||||||| |||||||   |||||||||||| ||| ||||||| |||   | | ||||||||||| ||||||| |||||||||||||||||    
T  42437753 tataagatgttacttttgatc--gtaatgattacataactttttcataaaattttgcgtgttttggatgcttaaccaatgcccttggggcactgg 42437845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 93 - 134
Target Start/End: Original strand, 25958092 - 25958133
Alignment:
Q  93 aaaatataagatgttatttttgataaagtaatgattacacaa 134  Q
    |||||||||||||||| |||||||||||||| ||||||||||    
T  25958092 aaaatataagatgttacttttgataaagtaacgattacacaa 25958133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 183
Target Start/End: Complemental strand, 25319545 - 25319453
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttgg 183  Q
    ||||||||||| |||||| ||||||  || ||||||||||||| | ||| ||| ||||| || ||||||| |||| ||||||| || ||||||    
T  25319545 tgaaaatataaaatgttacttttgactaaataatgattacacaccttttacattaaaacttaattgttttagatgtttaaccaatgtccttgg 25319453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 183
Target Start/End: Original strand, 33051579 - 33051671
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttgg 183  Q
    ||||||||||| || |||||||| || ||||||||||||| |||  |||| || ||||| || | |||||||||| ||||| |||| ||||||    
T  33051579 tgaaaatataaaatattattttttatcaagtaatgattactcaatttttttattaaaacttattagttttggatgtttaactattgtccttgg 33051671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 173
Target Start/End: Original strand, 28709597 - 28709679
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaacca 173  Q
    ||||||||||| |||||| ||||||| || ||||||||| ||||| |||| ||  |||| ||||| ||||| ||| |||||||    
T  28709597 tgaaaatataaaatgttacttttgatcaaataatgattatacaacttttttatagaaacttacttattttgaatgcttaacca 28709679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 160
Target Start/End: Complemental strand, 12373066 - 12373022
Alignment:
Q  115 ataaagtaatgattacacaacattttcatgaaaacatacttgtttt 160  Q
    |||||| |||||||||||||| ||||||||||||| ||||||||||    
T  12373066 ataaagcaatgattacacaac-ttttcatgaaaacttacttgtttt 12373022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 183
Target Start/End: Original strand, 34145939 - 34146027
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttgg 183  Q
    ||||||||||||||||||||||| ||||||| |||| ||||  | ||||| ||||  |||| |||||||||| |||| || ||| |||||    
T  34145939 aaatataagatgttatttttgatcaagtaataattatacaatttgttcat-aaaatttactagttttggatgcttaatcaatgctcttgg 34146027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 48138140 - 48138103
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgatt 128  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  48138140 tgaaaatataatatgttatttttgattaagtaatgatt 48138103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 53818893 - 53818829
Alignment:
Q  106 ttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaa 170  Q
    |||||||| || |||||||||||| ||||| ||||||| ||||| || || ||||||||| ||||    
T  53818893 ttatttttaatcaagtaatgattatacaactttttcattaaaacttatttattttggatgcttaa 53818829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 7e-34; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 97 - 190
Target Start/End: Complemental strand, 41436401 - 41436308
Alignment:
Q  97 tataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttggggcactg 190  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||| |||||||||||    
T  41436401 tataagatgttatttttgataaaataatgattacacaactttttcatgaaaacttacttgttttggatgcttaaccattgcctttggggcactg 41436308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 94 - 191
Target Start/End: Original strand, 40574177 - 40574274
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttggggcactgg 191  Q
    |||||||| |||| | |||||||| |||||| |||||||||| ||||||||||||  ||||||||||||||| |||||||||||||||||||||||||    
T  40574177 aaatataaaatgtaacttttgatagagtaataattacacaactttttcatgaaaatgtacttgttttggatgcttaaccattgcccttggggcactgg 40574274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 91 - 173
Target Start/End: Original strand, 4978783 - 4978865
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaacca 173  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||| || ||||| || || ||||||||| |||||||    
T  4978783 tgaaaatataagatgttacttttgatcaagtaatgattacacaacatttttataaaaacttatttattttggatgtttaacca 4978865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 91 - 173
Target Start/End: Original strand, 4996691 - 4996773
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaacca 173  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||| || ||||| || || ||||||||| |||||||    
T  4996691 tgaaaatataagatgttacttttgatcaagtaatgattacacaacatttttataaaaacttatttattttggatgtttaacca 4996773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 91 - 173
Target Start/End: Original strand, 13738426 - 13738508
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaacca 173  Q
    |||||||||||||||||| || ||||||||||||||||||||||  |||| || ||||| ||||||||||||||| |||||||    
T  13738426 tgaaaatataagatgttacttctgataaagtaatgattacacaatttttttataaaaacttacttgttttggatgcttaacca 13738508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 91 - 191
Target Start/End: Complemental strand, 6315969 - 6315869
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttggggcactg 190  Q
    |||||||||||||||||||||||||| |||||||||||||||||  |||| |  ||||  || |||||||||||| ||||||| ||| ||||| ||||||    
T  6315969 tgaaaatataagatgttatttttgatcaagtaatgattacacaatttttttacaaaaatttatttgttttggatgtttaaccaatgctcttggagcactg 6315870  T
Q  191 g 191  Q
    |    
T  6315869 g 6315869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 18717930 - 18717852
Alignment:
Q  93 aaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaac 171  Q
    |||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||  |  |||||||||||| |||||    
T  18717930 aaaatataagatgttacttttgatcaagtaatgattacacaactttttcatgaaaatttgtttgttttggatgcttaac 18717852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 91 - 164
Target Start/End: Complemental strand, 40346790 - 40346717
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggat 164  Q
    |||||||||||||||||||||||||| || |||||||| |||||| ||||||| ||||| ||||| ||||||||    
T  40346790 tgaaaatataagatgttatttttgatcaaataatgattgcacaactttttcataaaaacttacttattttggat 40346717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 42251686 - 42251598
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttg 182  Q
    |||||||| ||||||||||| || |   |||||||||||||| |||||||| |||| ||||||||||||||| ||||||| ||||||||    
T  42251686 aaatataacatgttattttttatcattcaatgattacacaactttttcatgtaaacttacttgttttggatgcttaaccaatgcccttg 42251598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 94 - 191
Target Start/End: Complemental strand, 4557651 - 4557553
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacatttt-catgaaaacatacttgttttggatggttaaccattgcccttggggcactgg 191  Q
    |||||||||| ||||||||||||  |||||| ||||| |||| |||| ||| ||||| ||||| | ||||||| ||||||||||||||| |||||||||    
T  4557651 aaatataagaagttatttttgattgagtaattattactcaacttttttcataaaaacttacttatcttggatgcttaaccattgcccttagggcactgg 4557553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 94 - 191
Target Start/End: Complemental strand, 8580591 - 8580494
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttggggcactgg 191  Q
    ||||||||||||||| ||||||| ||||||| |||| |||   |||||||||||||  ||||  |||||||| ||||||| ||||||| |||||||||    
T  8580591 aaatataagatgttacttttgattaagtaataattagacacatttttcatgaaaactaacttactttggatgcttaaccaatgcccttagggcactgg 8580494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 189
Target Start/End: Original strand, 28331288 - 28331384
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaacc-attgcccttggggcact 189  Q
    |||||||| || ||||||||||| ||||||||||||||||||  |||||| ||||| ||||| ||||| ||| |||||| | | |||||||||||||    
T  28331288 aaatataaaatattatttttgatcaagtaatgattacacaactctttcataaaaacttacttattttgaatgcttaaccaaatacccttggggcact 28331384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 91 - 182
Target Start/End: Complemental strand, 13717259 - 13717169
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttg 182  Q
    ||||||||||| ||||||||||| || ||||||| |||||| ||| |||| |||||||| ||||| |||| |||| ||||||||| ||||||    
T  13717259 tgaaaatataaaatgttatttttaat-aagtaataattacataactttttgatgaaaacttacttattttagatgcttaaccattacccttg 13717169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 93 - 175
Target Start/End: Original strand, 29526334 - 29526416
Alignment:
Q  93 aaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccatt 175  Q
    ||||||||| || |||||||| ||||||||||||||||||||  |||| |||||||| ||||| ||||  ||| |||||||||    
T  29526334 aaaatataaaatattatttttaataaagtaatgattacacaatttttttatgaaaacctacttattttaaatgtttaaccatt 29526416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 93 - 183
Target Start/End: Original strand, 31904256 - 31904345
Alignment:
Q  93 aaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttgg 183  Q
    ||||||||| ||||||||||| || |||||||||||||||||  ||||||| ||||  ||||| |||| |||| ||||||| |||||||||    
T  31904256 aaaatataaaatgttatttttaatcaagtaatgattacacaattttttcat-aaaatttacttattttagatgattaaccaatgcccttgg 31904345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 170
Target Start/End: Complemental strand, 18857514 - 18857437
Alignment:
Q  93 aaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaa 170  Q
    ||||||| | ||||||| |||||||||||||| ||||||| | |||||||||||||  ||||||||||| ||| ||||    
T  18857514 aaaatatgatatgttatctttgataaagtaataattacacgatattttcatgaaaatttacttgttttgaatgcttaa 18857437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 91 - 190
Target Start/End: Complemental strand, 23453427 - 23453327
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacatttt-catgaaaacatacttgttttggatggttaaccattgcccttggggcact 189  Q
    |||||||||||||||||| ||||||| || ||| ||||||||||| |||| ||| ||||| | ||||||||||||  ||||||| ||| |||  ||||||    
T  23453427 tgaaaatataagatgttacttttgatcaaataaagattacacaactttttccataaaaacttgcttgttttggatacttaaccaatgcgcttaaggcact 23453328  T
Q  190 g 190  Q
    |    
T  23453327 g 23453327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 189
Target Start/End: Original strand, 1004806 - 1004903
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttggggcact 189  Q
    ||||||||||| || ||| |||||||||| || |||||||||||| ||||||| ||||| |  ||||||| |||  |||||||||||| ||||| ||||    
T  1004806 tgaaaatataaaatattacttttgataaatta-tgattacacaactttttcataaaaacttttttgttttagatccttaaccattgcctttgggacact 1004903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 191
Target Start/End: Original strand, 3689653 - 3689748
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttggggcactgg 191  Q
    ||||||||||||||| |||||||   |||||||||||| ||| || |||| |||   | |||||||||| || ||||||| |||||||||||||||||    
T  3689653 aaatataagatgttacttttgatc--gtaatgattacataactttatcataaaattgtgcttgttttggctgcttaaccaatgcccttggggcactgg 3689748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 173
Target Start/End: Original strand, 43681302 - 43681384
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaacca 173  Q
    ||||||||||||||||||||||| |  || ||||||||| ||||| ||||||| ||||| |  |||||||| ||||| |||||    
T  43681302 tgaaaatataagatgttattttttaccaaataatgattatacaactttttcataaaaacttgtttgttttgaatggtaaacca 43681384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 140
Target Start/End: Original strand, 32909439 - 32909485
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacatttt 140  Q
    ||||||||||| ||| ||||||||||||||| |||||| ||||||||    
T  32909439 aaatataagatattacttttgataaagtaattattacataacatttt 32909485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 170
Target Start/End: Complemental strand, 17641253 - 17641177
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaa 170  Q
    |||||||| |||||| ||||||||||| ||| ||| |||||| |||  |||||||| ||||| |||| |||| ||||    
T  17641253 aaatataaaatgttacttttgataaagaaattattgcacaacttttcaatgaaaacttacttattttagatgcttaa 17641177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 2e-31; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 44648969 - 44649066
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttggggcac 188  Q
    ||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||| || |||||||||||| |||| |||||||||||||||||    
T  44648969 tgaaaatataaaatgttacttttgataaagtaatgattacacaactttttcatgaaaacttatttgttttggatgcttaatcattgcccttggggcac 44649066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 94 - 191
Target Start/End: Complemental strand, 600451 - 600354
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttggggcactgg 191  Q
    ||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||| || ||||||| |||| ||||||||||| ||||| |||||||    
T  600451 aaatataagatgttacttttgataaagtaatgattgcacaactttttcatgaaaacttatttgttttagatgtttaaccattgcacttggagcactgg 600354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 91 - 184
Target Start/End: Original strand, 17720209 - 17720304
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggt--taaccattgcccttggg 184  Q
    |||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||| |  |||||||||||| |  |||||| ||||||||||    
T  17720209 tgaaaatataagatgttatttttgatcatgtaatgattacacaactttttcatgaaaacttgtttgttttggatgcttataaccaatgcccttggg 17720304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 94 - 188
Target Start/End: Complemental strand, 20542466 - 20542372
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttggggcac 188  Q
    ||||||||||||||| ||||||| ||||||||||||||||   ||||| | ||||| |||| |||||||||| ||||||| ||||||||||||||    
T  20542466 aaatataagatgttacttttgattaagtaatgattacacacttttttcttaaaaacttactcgttttggatgcttaaccaatgcccttggggcac 20542372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 94 - 188
Target Start/End: Original strand, 27506980 - 27507074
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttggggcac 188  Q
    ||||||||||| ||| |||||||||| |||| |||||||||| ||||||||||||  |||||||||| ||||  ||||||||| |||||||||||    
T  27506980 aaatataagatattacttttgataaaataataattacacaactttttcatgaaaatttacttgttttagatgcgtaaccattgtccttggggcac 27507074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 119 - 191
Target Start/End: Original strand, 23725684 - 23725756
Alignment:
Q  119 agtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttggggcactgg 191  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||| ||||||| |||||| ||||||||||    
T  23725684 agtaatgatcacacaactttttcatgaaaacttacttgttttggatgcttaaccaatgccctgggggcactgg 23725756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 94 - 189
Target Start/End: Complemental strand, 1342400 - 1342306
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttggggcact 189  Q
    ||||||||||||||| ||||||||||  |||||||||||||| |||| |||||||| ||||| |||| |||| ||||||||||||  |||||||||    
T  1342400 aaatataagatgttacttttgataaac-aatgattacacaacttttttatgaaaacttacttattttagatgcttaaccattgcctgtggggcact 1342306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 94 - 189
Target Start/End: Complemental strand, 41726975 - 41726880
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttggggcact 189  Q
    |||||||| ||||||||||| ||||||||||||||||| |   ||||||| ||||| ||||| |||| |||| ||||||||||||||| |||||||    
T  41726975 aaatataaaatgttattttttataaagtaatgattacatagttttttcataaaaacttacttattttagatgcttaaccattgcccttagggcact 41726880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 94 - 164
Target Start/End: Original strand, 42361548 - 42361618
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggat 164  Q
    |||||||||||||| ||||| ||||||||| |||| |||||| ||||||||||||| ||||||||||||||    
T  42361548 aaatataagatgttcttttttataaagtaaagattgcacaactttttcatgaaaacttacttgttttggat 42361618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 94 - 181
Target Start/End: Original strand, 6270184 - 6270271
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttg-ttttggatggttaaccattgccctt 181  Q
    ||||||||| ||||||||| |||||||||||||||||||||| |||| |||||||| |||||| |||| |||| |||||||||| ||||    
T  6270184 aaatataaggtgttatttt-gataaagtaatgattacacaacttttttatgaaaacttacttgttttttgatgcttaaccattgtcctt 6270271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 94 - 173
Target Start/End: Complemental strand, 10029241 - 10029162
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaacca 173  Q
    ||||||||||||||| ||||||| |||||||||||| ||||| ||||||| ||||  |||||| |||||||| |||||||    
T  10029241 aaatataagatgttacttttgatcaagtaatgattatacaactttttcataaaaatttacttgatttggatgcttaacca 10029162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 94 - 181
Target Start/End: Complemental strand, 40489929 - 40489842
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgccctt 181  Q
    |||||||| |||||| | |||||||||||||||||||| ||| ||||||| ||||| || ||||||| |||  |||||||||||||||    
T  40489929 aaatataaaatgttactattgataaagtaatgattacataactttttcataaaaacttatttgttttagatatttaaccattgccctt 40489842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 91 - 173
Target Start/End: Original strand, 35901447 - 35901529
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaacca 173  Q
    ||||||| |||||||||| |||| || || |||||||| |||||| ||||||| ||||| ||||||||||||||| |||||||    
T  35901447 tgaaaatgtaagatgttacttttaattaaataatgattgcacaactttttcataaaaacttacttgttttggatgcttaacca 35901529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 23425310 - 23425371
Alignment:
Q  103 atgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggat 164  Q
    |||||||||||||| || ||||||||||||||| ||||||| ||||| ||||||||||||||    
T  23425310 atgttatttttgatcaaataatgattacacaactttttcattaaaacgtacttgttttggat 23425371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 91 - 191
Target Start/End: Complemental strand, 3137482 - 3137382
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttggggcactg 190  Q
    ||||||| |||||||||| ||||||| ||||||| |||||||||| |||||||  |||| || ||||||||||||  |||||| ||  ||| ||||||||    
T  3137482 tgaaaatgtaagatgttacttttgatcaagtaattattacacaactttttcatataaacttatttgttttggatgcctaaccaatgttcttagggcactg 3137383  T
Q  191 g 191  Q
    |    
T  3137382 g 3137382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 93 - 173
Target Start/End: Complemental strand, 32881193 - 32881113
Alignment:
Q  93 aaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaacca 173  Q
    |||||||||||| |||||||| || |||| ||||||||||||||||||  | ||||| ||||| ||||||||| |||||||    
T  32881193 aaaatataagatattattttttatcaagttatgattacacaacattttattaaaaacttacttattttggatgtttaacca 32881113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 18200714 - 18200792
Alignment:
Q  93 aaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaac 171  Q
    ||||||||| |||||| ||||||| |||||||||||||||||  ||||||| ||| | ||||| ||||||||| |||||    
T  18200714 aaaatataacatgttacttttgattaagtaatgattacacaattttttcataaaagcttacttattttggatgcttaac 18200792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 112 - 160
Target Start/End: Original strand, 10652793 - 10652841
Alignment:
Q  112 ttgataaagtaatgattacacaacattttcatgaaaacatacttgtttt 160  Q
    |||||||||||||||||||||||||||||||| ||||  ||||||||||    
T  10652793 ttgataaagtaatgattacacaacattttcataaaaatttacttgtttt 10652841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 93 - 181
Target Start/End: Original strand, 18647494 - 18647581
Alignment:
Q  93 aaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgccctt 181  Q
    |||||||||||||||||||| |||||| | ||||||||||||  |||||||| |||  ||||||||||  ||| ||||||||| |||||    
T  18647494 aaaatataagatgttatttt-gataaaatgatgattacacaattttttcatggaaatttacttgttttaaatgcttaaccattaccctt 18647581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 173
Target Start/End: Complemental strand, 13873776 - 13873697
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaacca 173  Q
    |||||||||||||||||||| || ||||||||||| || ||  ||||||| ||||| || |||||||| ||| |||||||    
T  13873776 aaatataagatgttatttttaattaagtaatgattgcataattttttcataaaaacttaattgttttgaatgtttaacca 13873697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 103 - 160
Target Start/End: Complemental strand, 547132 - 547075
Alignment:
Q  103 atgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgtttt 160  Q
    |||||||||||||| || |||| |||||||||| ||||||| ||||| ||||||||||    
T  547132 atgttatttttgatcaaataataattacacaactttttcattaaaacgtacttgtttt 547075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 91 - 148
Target Start/End: Original strand, 3347542 - 3347598
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaa 148  Q
    |||||||||||||||||| |||| |||||||||| |||||||||| ||||||| ||||    
T  3347542 tgaaaatataagatgttacttttaataaagtaataattacacaac-ttttcataaaaa 3347598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 187
Target Start/End: Complemental strand, 11151001 - 11150909
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttggggca 187  Q
    ||||||||||||||| ||||||| || ||||||||||||||  ||||  | ||||| ||||| ||||| ||| ||||||| ||||||| |||||    
T  11151001 aaatataagatgttacttttgatcaaataatgattacacaa-ttttttttaaaaacttacttattttgaatgcttaaccaatgcccttagggca 11150909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 91 - 148
Target Start/End: Complemental strand, 44947429 - 44947372
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaa 148  Q
    ||||||||||| |||||| ||||||||||||| |||||| ||||| ||||||| ||||    
T  44947429 tgaaaatataaaatgttacttttgataaagtattgattatacaactttttcataaaaa 44947372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 25250382 - 25250345
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgatt 128  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  25250382 tgaaaatataatatgttatttttgatcaagtaatgatt 25250345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 600568 - 600528
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaa 134  Q
    ||||||| ||||||| ||||||||||||||||||| |||||    
T  600568 aaatataggatgttacttttgataaagtaatgattgcacaa 600528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 2e-27; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 91 - 189
Target Start/End: Original strand, 8001778 - 8001876
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttggggcact 189  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||  |||||||||| |||| |||||||||| |||| |||||||    
T  8001778 tgaaaatataagatgttacttttgataaagtaatgattacacaacttttacatgaaaatttacttgttttagatgcttaaccattggccttagggcact 8001876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 182
Target Start/End: Original strand, 17169301 - 17169392
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttg 182  Q
    |||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||| || ||||||| |||| ||||||||| ||||||    
T  17169301 tgaaaatataagatgttatttttgataaagtaattattatacaactttttcatgaaaacttatttgttttagatgcttaaccattacccttg 17169392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 94 - 180
Target Start/End: Complemental strand, 26829571 - 26829485
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgccct 180  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||  ||||| |||| |||| ||||||||||||||    
T  26829571 aaatataagatgttacttttgataaagtaatgattacacaactttttcatgaaaatttacttattttagatgcttaaccattgccct 26829485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 91 - 160
Target Start/End: Original strand, 10226493 - 10226562
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgtttt 160  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||| ||||||    
T  10226493 tgaaaatataagatgttaattttgataaagtaatgattacacaactttttcatgaaaacttacctgtttt 10226562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 91 - 160
Target Start/End: Complemental strand, 27688561 - 27688492
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgtttt 160  Q
    |||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||| ||||||||||    
T  27688561 tgaaaatataagatgttacttttgataaagtaatgattacacaagtttttcatgaaaacttacttgtttt 27688492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 91 - 192
Target Start/End: Complemental strand, 37494253 - 37494157
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttggggcactg 190  Q
    ||||||||||||||||||||||||||||||||||||||     |||||||||||||||| ||||| | || |||| |||||||||| | |||||||||||    
T  37494253 tgaaaatataagatgttatttttgataaagtaatgatt-----acattttcatgaaaacttacttatcttagatgcttaaccattgtcattggggcactg 37494159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 110 - 188
Target Start/End: Original strand, 34347560 - 34347638
Alignment:
Q  110 ttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttggggcac 188  Q
    |||||||||||||||||||||||||| ||||||| || |  ||||||||||||||| |||| |||||||||||||||||    
T  34347560 ttttgataaagtaatgattacacaactttttcataaagatttacttgttttggatgcttaatcattgcccttggggcac 34347638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 33148164 - 33148253
Alignment:
Q  93 aaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttg 182  Q
    ||||||||||||| || ||||||| |||||||||||||||||  ||||||| ||||| ||||||||||| ||| ||||| | ||||||||    
T  33148164 aaaatataagatgctacttttgatcaagtaatgattacacaattttttcataaaaacttacttgttttgaatgtttaacaaatgcccttg 33148253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 91 - 191
Target Start/End: Original strand, 13969130 - 13969230
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttggggcactg 190  Q
    ||||||||||| |||||| |||| || ||||||| |||||||||  ||||||| ||||| |||||||||||| || ||||||| | | ||||||||||||    
T  13969130 tgaaaatataaaatgttacttttaattaagtaattattacacaattttttcataaaaacttacttgttttggttgcttaaccaatactcttggggcactg 13969229  T
Q  191 g 191  Q
    |    
T  13969230 g 13969230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 94 - 189
Target Start/End: Complemental strand, 5069575 - 5069481
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttggggcact 189  Q
    ||||||||||| |||||||||||||||||||||||||| ||| |||| |||||||| || || |||| |||| ||||||||||  ||| |||||||    
T  5069575 aaatataagatattatttttgataaagtaatgattacataac-tttttatgaaaacttatttattttagatgcttaaccattgttcttagggcact 5069481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 91 - 171
Target Start/End: Original strand, 46295902 - 46295982
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaac 171  Q
    ||||||||||| |||||| ||||||| ||||||| || ||||||| ||||||| ||||| || |||||||||||| |||||    
T  46295902 tgaaaatataaaatgttacttttgatcaagtaatcatgacacaactttttcataaaaacttatttgttttggatgcttaac 46295982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 93 - 179
Target Start/End: Complemental strand, 38597560 - 38597474
Alignment:
Q  93 aaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgccc 179  Q
    |||||||||||| | | ||||||| |||||||||||| ||||| |||| || ||||| ||||||||||||||  ||||||| |||||    
T  38597560 aaaatataagatatcacttttgattaagtaatgattagacaacttttttattaaaacttacttgttttggatacttaaccaatgccc 38597474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 179
Target Start/End: Original strand, 30941503 - 30941588
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgccc 179  Q
    |||||||| ||||||||||| || ||  ||| |||||||||| |||||||| |||| |||||||| |||||| ||||||| |||||    
T  30941503 aaatataacatgttattttttatcaaacaataattacacaactttttcatgtaaacttacttgttctggatgcttaaccaatgccc 30941588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 189
Target Start/End: Complemental strand, 8279818 - 8279720
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttggggcact 189  Q
    ||||||||||||||||||  |||||  || ||||||||| ||||| ||||  | ||| | || ||||||| | || ||||||| |||||||||||||||    
T  8279818 tgaaaatataagatgttacatttgactaaataatgattatacaacgttttattaaaatcttaattgttttagttgattaaccaatgcccttggggcact 8279720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 179
Target Start/End: Original strand, 17644831 - 17644872
Alignment:
Q  138 tttcatgaaaacatacttgttttggatggttaaccattgccc 179  Q
    |||||| ||||| ||||||||||||||| |||||||||||||    
T  17644831 tttcattaaaacttacttgttttggatgcttaaccattgccc 17644872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 4e-23; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 91 - 182
Target Start/End: Complemental strand, 27544671 - 27544580
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttg 182  Q
    ||||||||||||||||||||||| || | |||||||||||||||| ||||||||||||  ||||||||||||||| ||||| | ||||||||    
T  27544671 tgaaaatataagatgttattttttatcatgtaatgattacacaactttttcatgaaaatttacttgttttggatgtttaactaatgcccttg 27544580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 91 - 191
Target Start/End: Original strand, 30840629 - 30840728
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttggggcactg 190  Q
    |||||||||||||||||| ||||||| |||||||||||||||||| ||||  ||||||| ||||||||||||||| |||| || |||| || || |||||    
T  30840629 tgaaaatataagatgttacttttgatcaagtaatgattacacaac-tttttttgaaaacttacttgttttggatgcttaatcaatgcctttaggacactg 30840727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 93 - 180
Target Start/End: Original strand, 30293856 - 30293943
Alignment:
Q  93 aaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgccct 180  Q
    |||||||||||||||| ||||||| |||||||||||||| ||  ||||||||||||| |  |||||||| ||||||||||| ||||||    
T  30293856 aaaatataagatgttacttttgatcaagtaatgattacataattttttcatgaaaacttgtttgttttgaatggttaaccagtgccct 30293943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 91 - 181
Target Start/End: Complemental strand, 11815993 - 11815903
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgccctt 181  Q
    |||||||||||||||||| ||||||||||||||||||||||||   ||||||| ||||| ||||||||||  ||  |||| ||||||||||    
T  11815993 tgaaaatataagatgttacttttgataaagtaatgattacacatatttttcataaaaacttacttgttttaaatatttaatcattgccctt 11815903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 94 - 184
Target Start/End: Original strand, 27366005 - 27366095
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttggg 184  Q
    ||||||||||| ||| ||| ||  || |||||||||| |||  |||||||||||||||  |||||||||||| ||||||| ||||||||||    
T  27366005 aaatataagatattactttagaccaaataatgattacgcaattttttcatgaaaacatgtttgttttggatgcttaaccaatgcccttggg 27366095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 191
Target Start/End: Complemental strand, 22294063 - 22293966
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttggggcactgg 191  Q
    ||||||||||| ||  ||||||| || |||| ||| |||||| ||||||| ||||| ||||||||||| ||| ||||||| | |||||| ||||||||    
T  22294063 aaatataagatattggttttgatcaaataattattgcacaactttttcataaaaacttacttgttttgaatgtttaaccaatacccttgtggcactgg 22293966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 170
Target Start/End: Complemental strand, 41645113 - 41645037
Alignment:
Q  92 gaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaa 170  Q
    ||||||||||||| |||||||| || ||||||||||||||||||  |||||||||||  ||||| |||| |||| ||||    
T  41645113 gaaaatataagatattattttttatcaagtaatgattacacaac--tttcatgaaaatttacttattttagatgcttaa 41645037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 149
Target Start/End: Complemental strand, 36482133 - 36482075
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaac 149  Q
    |||||||||||||||||| ||||||| || ||||| ||||||||| |||| ||||||||    
T  36482133 tgaaaatataagatgttacttttgatcaaataatgtttacacaacttttttatgaaaac 36482075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 175
Target Start/End: Complemental strand, 6646367 - 6646286
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccatt 175  Q
    |||||||| |||||| ||||||||| |||||||||||||||  ||||||| || |  |||||||||| |||| |||| ||||    
T  6646367 aaatataatatgttacttttgataatgtaatgattacacaattttttcattaatatttacttgttttagatgtttaaacatt 6646286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 125 - 191
Target Start/End: Complemental strand, 34346953 - 34346886
Alignment:
Q  125 gattacacaacattttcatgaaaacatac-ttgttttggatggttaaccattgcccttggggcactgg 191  Q
    ||||||||||| ||||||||||||| ||| || ||||  ||| ||||||||||||||| |||||||||    
T  34346953 gattacacaactttttcatgaaaacttacttttttttatatgtttaaccattgcccttagggcactgg 34346886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 93 - 183
Target Start/End: Original strand, 12810180 - 12810270
Alignment:
Q  93 aaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttgg 183  Q
    |||||||||||| ||| |||||| |||||||| |||||||||| ||||||||||| ||| |||||||| |||| |||||||||||||||||    
T  12810180 aaaatataagatattacttttgacaaagtaataattacacaactttttcatgaaagcatgcttgttttagatgtttaaccattgcccttgg 12810270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 93 - 191
Target Start/End: Original strand, 34993161 - 34993259
Alignment:
Q  93 aaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttggggcactgg 191  Q
    |||||||||||||||| |||||||||| |||| |||||||||| ||||||||||||| |||||| ||| |||| |||| |||||| ||| |||||||||    
T  34993161 aaaatataagatgttacttttgataaaataataattacacaactttttcatgaaaacttacttgatttagatgcttaatcattgctcttagggcactgg 34993259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 96 - 181
Target Start/End: Complemental strand, 30028041 - 30027956
Alignment:
Q  96 atataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgccctt 181  Q
    ||||||||||||| |||||||||||||||||| ||||||| ||||||||||| | |||||||| |||||| ||||||||| |||||    
T  30028041 atataagatgttacttttgataaagtaatgatcacacaactttttcatgaaatcttacttgttatggatgtttaaccattaccctt 30027956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 91 - 182
Target Start/End: Complemental strand, 37928382 - 37928291
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttg 182  Q
    ||||||||||| |||||||||||||||||||||| |||||||||| |||| || ||||| ||||| ||||||||| ||||||| || |||||    
T  37928382 tgaaaatataaaatgttatttttgataaagtaattattacacaacttttttataaaaacttacttattttggatgtttaaccaatgtccttg 37928291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 91 - 189
Target Start/End: Complemental strand, 19677077 - 19676979
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttggggcact 189  Q
    |||||||||||||||||| ||||||| |||||||||||||||| | ||| ||  ||||| | ||||||| ||||| ||||||| |||||||||||||||    
T  19677077 tgaaaatataagatgttacttttgattaagtaatgattacacaccttttacaccaaaacttgcttgtttaggatgcttaaccaatgcccttggggcact 19676979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 91 - 181
Target Start/End: Complemental strand, 16980024 - 16979934
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgccctt 181  Q
    |||||||||||||||||| |||||||  |||||| || ||||||| ||||||| ||||  ||||||||||||||| ||||||| |||||||    
T  16980024 tgaaaatataagatgttacttttgatcgagtaataatcacacaactttttcataaaaatttacttgttttggatgcttaaccaatgccctt 16979934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 23142686 - 23142775
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaac-attttcatgaaaacatacttgttttggatggttaaccattgcccttg 182  Q
    ||||||||||||||||||||||| ||||||| ||||||||||  ||||||| ||||| ||||| ||||||||| ||||||| ||| ||||    
T  23142686 aaatataagatgttatttttgatcaagtaattattacacaacttttttcataaaaacttacttattttggatgtttaaccaatgctcttg 23142775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 93 - 160
Target Start/End: Original strand, 8896631 - 8896698
Alignment:
Q  93 aaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgtttt 160  Q
    |||||||||||||||| ||||||| | |||||||||||||||  ||||||||||||| ||||||||||    
T  8896631 aaaatataagatgttacttttgatcaggtaatgattacacaattttttcatgaaaacttacttgtttt 8896698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 122 - 191
Target Start/End: Original strand, 1521263 - 1521332
Alignment:
Q  122 aatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttggggcactgg 191  Q
    ||||||||| |||  |||||||| |||| ||||||||||||||| ||||||||||||||||||| |||||    
T  1521263 aatgattacgcaattttttcatggaaacttacttgttttggatgtttaaccattgcccttggggaactgg 1521332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 94 - 175
Target Start/End: Original strand, 25530579 - 25530660
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccatt 175  Q
    |||||||| ||||||  ||||||||||||||||||||||||  ||||||| ||||| || |||||||||||| | |||||||    
T  25530579 aaatataaaatgttacatttgataaagtaatgattacacaattttttcataaaaacttatttgttttggatgctgaaccatt 25530660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 96 - 189
Target Start/End: Original strand, 41064341 - 41064434
Alignment:
Q  96 atataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttggggcact 189  Q
    ||||||||||||| ||||||| |||||||| ||| ||||| |||| || ||||| || || ||||||||| ||||| | |||||||||||||||    
T  41064341 atataagatgttacttttgatcaagtaatggttagacaacttttttattaaaacttatttattttggatgcttaacaaatgcccttggggcact 41064434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 171
Target Start/End: Complemental strand, 42888385 - 42888305
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttc-atgaaaacatacttgttttggatggttaac 171  Q
    |||||||||||||||||  ||||||||||||||||||| ||||| |||||| |||||||| ||||| |||| |||| |||||    
T  42888385 tgaaaatataagatgttgcttttgataaagtaatgattgcacaa-attttctatgaaaacttacttattttagatgtttaac 42888305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 189
Target Start/End: Original strand, 31850782 - 31850878
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacattttcat-gaaaacatacttgttttggatggttaaccattgcccttggggcact 189  Q
    ||||||||||||||| |||| ||||| ||||||||||| ||  |||||||  ||||| |||||||||| |||| ||||||||| || |||| |||||    
T  31850782 aaatataagatgttacttttaataaaataatgattacataattttttcataaaaaacttacttgttttagatgcttaaccattacctttggagcact 31850878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 173
Target Start/End: Original strand, 31487744 - 31487823
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaacca 173  Q
    |||||||||||||||||||| || ||||||| |||||||||  ||||| | ||||| || || ||||||||| |||||||    
T  31487744 aaatataagatgttattttttattaagtaataattacacaattttttcttaaaaacttatttattttggatgtttaacca 31487823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 182
Target Start/End: Complemental strand, 43118888 - 43118797
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttg 182  Q
    ||||||||| ||||||||  |||||| || || | ||||| |||  ||||||| ||||| ||||||||||||||| |||| |||||||||||    
T  43118888 tgaaaatatgagatgttacatttgatcaaatagtaattacgcaattttttcattaaaacttacttgttttggatgattaagcattgcccttg 43118797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 173
Target Start/End: Complemental strand, 16685812 - 16685731
Alignment:
Q  94 aaatataagatgttatt-tttgataaagtaatgattacacaacatttt-catgaaaacatacttgttttggatggttaacca 173  Q
    ||||||||||||||| | |||||| |||||||||||||||||| ||||  || ||||| ||||| ||||||||| |||||||    
T  16685812 aaatataagatgttactctttgatcaagtaatgattacacaactttttaaataaaaacttacttattttggatgcttaacca 16685731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 173
Target Start/End: Complemental strand, 17660048 - 17659967
Alignment:
Q  94 aaatataagatgttatt-tttgataaagtaatgattacacaacatttt-catgaaaacatacttgttttggatggttaacca 173  Q
    ||||||||||||||| | |||||| |||||||||||||||||| ||||  || ||||| ||||| ||||||||| |||||||    
T  17660048 aaatataagatgttactctttgatcaagtaatgattacacaactttttaaataaaaacttacttattttggatgcttaacca 17659967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 175
Target Start/End: Complemental strand, 43626429 - 43626345
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccatt 175  Q
    |||||| || ||||||||||||| |||||||||| |||||||||  ||||||| ||||  || || |||| |||| |||||||||    
T  43626429 tgaaaaaattagatgttattttttataaagtaataattacacaattttttcataaaaatttatttattttagatgtttaaccatt 43626345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 23080658 - 23080713
Alignment:
Q  93 aaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaa 148  Q
    |||||||||||||||| ||||||| |||||||||||||| ||  ||||||| ||||    
T  23080658 aaaatataagatgttacttttgatcaagtaatgattacataattttttcataaaaa 23080713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 187
Target Start/End: Original strand, 7833775 - 7833871
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttggggca 187  Q
    |||||||||||  ||||||||||||  || |||| ||| ||| || |||| || ||| | |||||||||||| || ||||||| |||||| ||||||    
T  7833775 tgaaaatataaactgttatttttgaccaactaattattgcactactttttaataaaatcttacttgttttggctgcttaaccaatgccctcggggca 7833871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 95 - 189
Target Start/End: Complemental strand, 32134124 - 32134030
Alignment:
Q  95 aatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttggggcact 189  Q
    ||||||||||||||||||| || |||||||||||||||||| |||||| |||||| ||||| |||| |||| ||||||| ||||||| |||||||    
T  32134124 aatataagatgttattttttatcaagtaatgattacacaactttttcaagaaaacttacttattttagatgcttaaccaatgcccttagggcact 32134030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 8636783 - 8636859
Alignment:
Q  99 taagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccatt 175  Q
    |||||||||| |||||||||||||||||||||| ||| ||||||||||||| ||||| ||||| ||| |||| ||||    
T  8636783 taagatgttacttttgataaagtaatgattacataactttttcatgaaaacttacttattttgtatgcttaatcatt 8636859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 118 - 188
Target Start/End: Complemental strand, 31223251 - 31223180
Alignment:
Q  118 aagtaatgattacacaacatttt-catgaaaacatacttgttttggatggttaaccattgcccttggggcac 188  Q
    |||||||||||||||||| |||| ||||||||| ||||||||||||||| ||||||| ||||||||| ||||    
T  31223251 aagtaatgattacacaacttttttcatgaaaacttacttgttttggatgtttaaccaatgcccttggagcac 31223180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 27082374 - 27082295
Alignment:
Q  110 ttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttggggcact 189  Q
    ||||||| || |||| |||||||||| ||||||||||||  |||||||||||| || ||||||| || ||||||||||||    
T  27082374 ttttgatcaaataatcattacacaactttttcatgaaaatttacttgttttggttgtttaaccaatgtccttggggcact 27082295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 190
Target Start/End: Complemental strand, 227417 - 227316
Alignment:
Q  91 tgaaaatataagatgttatttttgat-aaagtaatgattacacaa-cattttcatgaaaacatacttgttttggatggttaaccattgcccttggggcac 188  Q
    |||||||||||||||||| ||||||| |||  |||||||||||||   ||||||| ||| | ||||| ||||||||| ||||||||| |||||| |||||    
T  227417 tgaaaatataagatgttacttttgataaaaacaatgattacacaatttttttcataaaatcttacttcttttggatgcttaaccatttcccttgaggcac 227318  T
Q  189 tg 190  Q
    ||    
T  227317 tg 227316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 148
Target Start/End: Original strand, 33121342 - 33121399
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaa 148  Q
    ||||||||||||||||||||||| || ||  |||||||||||||| ||||||||||||    
T  33121342 tgaaaatataagatgttattttttatcaaacaatgattacacaactttttcatgaaaa 33121399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 173
Target Start/End: Complemental strand, 2470430 - 2470351
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaacca 173  Q
    ||||||||||| ||||||||| | |||||||||||| ||||| ||||||| ||||| ||| | |||| |||| |||||||    
T  2470430 aaatataagatattatttttgttcaagtaatgattatacaactttttcataaaaacttacctattttagatgcttaacca 2470351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 173
Target Start/End: Original strand, 5611163 - 5611242
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaacca 173  Q
    ||||||||||||||| |||| || || |||| |||| ||||| | ||||| ||||| ||||||||||||||| |||||||    
T  5611163 aaatataagatgttacttttaatcaaataataattatacaacttattcataaaaacttacttgttttggatgtttaacca 5611242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 160
Target Start/End: Original strand, 19320305 - 19320372
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaac-attttcatgaaaacatacttgtttt 160  Q
    |||||||| |||||| |||||||||||||| |||||||||||  |||| |||||||| ||||||||||    
T  19320305 aaatataaaatgttacttttgataaagtaacgattacacaactctttttatgaaaacttacttgtttt 19320372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 184
Target Start/End: Original strand, 17835010 - 17835100
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttggg 184  Q
    ||||||||||| ||| ||||||| ||||||| |||| || |  ||||||||||||| | ||||||||| ||| ||||||| |||| |||||    
T  17835010 aaatataagatattacttttgattaagtaataattatacgattttttcatgaaaacttgcttgttttgaatgtttaaccaatgcctttggg 17835100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 171
Target Start/End: Original strand, 19659645 - 19659725
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaac 171  Q
    ||||||||| |||| |||| |||||| || ||||||||||||||| |||| || ||||| ||||| |||| |||| |||||    
T  19659645 tgaaaatatgagatattatatttgatcaactaatgattacacaacttttttataaaaacttacttattttagatgtttaac 19659725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 161
Target Start/End: Complemental strand, 18493325 - 18493255
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttg 161  Q
    ||||||||||| |||||| ||||||| ||||||| |||||| ||| |||| || ||||| |||||| ||||    
T  18493325 tgaaaatataaaatgttacttttgatcaagtaattattacaaaacttttttataaaaacttacttgatttg 18493255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 6e-22; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 91 - 176
Target Start/End: Complemental strand, 12095040 - 12094955
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattg 176  Q
    |||||||||||||| ||| |||||||||||||||||||||||||| ||||||| ||||| ||||| ||||||||| |||| |||||    
T  12095040 tgaaaatataagatattacttttgataaagtaatgattacacaactttttcataaaaacttacttattttggatgtttaaacattg 12094955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 19480618 - 19480550
Alignment:
Q  92 gaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgtttt 160  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||| ||||||||||    
T  19480618 gaaaatataagatgttacttttgataaagtaatgattacacaactttttcataaaaacttacttgtttt 19480550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 91 - 187
Target Start/End: Original strand, 39810734 - 39810829
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttggggca 187  Q
    |||||||||||||||||| ||||||| ||||||| |||||||||  || ||||||||||||| |||||||||||| ||||||| | |||||||||||    
T  39810734 tgaaaatataagatgttacttttgatcaagtaataattacacaa-tttatcatgaaaacatatttgttttggatgtttaaccaatacccttggggca 39810829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 91 - 181
Target Start/End: Complemental strand, 28740367 - 28740277
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgccctt 181  Q
    ||||||||||||||| |||||||||||||||||||||||| || | ||||||| ||||| || ||||||| |||| |||| ||||||||||    
T  28740367 tgaaaatataagatgatatttttgataaagtaatgattacgcatctttttcattaaaacttatttgttttagatgattaatcattgccctt 28740277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 95 - 180
Target Start/End: Original strand, 2824851 - 2824936
Alignment:
Q  95 aatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgccct 180  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||| ||||| | |||||||| |||| |||| || ||||||    
T  2824851 aatataagatgttacttttgatcaagtaatgattacacaacattttcataaaaacttgcttgttttagatgcttaatcaatgccct 2824936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 178
Target Start/End: Original strand, 31991489 - 31991576
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcc 178  Q
    |||||||||||||||||||||||||||||||||| ||||||| |  ||||||||||||  ||||| ||||  ||| ||||||||||||    
T  31991489 tgaaaatataagatgttatttttgataaagtaataattacacgattttttcatgaaaatttacttattttatatgtttaaccattgcc 31991576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 22019683 - 22019615
Alignment:
Q  93 aaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttg 161  Q
    ||||||||||||||||||||  || |||||||||||||||||| ||||| ||||||| |||||||||||    
T  22019683 aaaatataagatgttattttctattaagtaatgattacacaactttttcttgaaaacttacttgttttg 22019615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 94 - 173
Target Start/End: Complemental strand, 20775151 - 20775072
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaacca 173  Q
    ||||||||||| ||||||||||| || |||| |||||| ||| ||||||| ||||| ||||||||||||||| |||||||    
T  20775151 aaatataagatattatttttgatcaaataattattacataactttttcataaaaacttacttgttttggatgcttaacca 20775072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 94 - 185
Target Start/End: Complemental strand, 27284151 - 27284060
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttgggg 185  Q
    ||||||||||||||| ||||||| || |||||||| |||||| |||| || ||||| || || ||||||||| ||||||| |||||||||||    
T  27284151 aaatataagatgttacttttgatcaaataatgattgcacaacttttttataaaaacttatttattttggatgtttaaccaatgcccttgggg 27284060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 95 - 154
Target Start/End: Complemental strand, 44639946 - 44639887
Alignment:
Q  95 aatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatact 154  Q
    |||||||||||||| ||||||| |||||||||||||||||| |||| |||||||||||||    
T  44639946 aatataagatgttacttttgattaagtaatgattacacaactttttgatgaaaacatact 44639887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 110 - 181
Target Start/End: Complemental strand, 48419136 - 48419065
Alignment:
Q  110 ttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgccctt 181  Q
    ||||||||||||||||||| |||||| ||||||||||||| ||||||||||  ||| ||||| |||||||||    
T  48419136 ttttgataaagtaatgattgcacaactttttcatgaaaacttacttgttttatatgcttaactattgccctt 48419065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 95 - 175
Target Start/End: Complemental strand, 13967923 - 13967842
Alignment:
Q  95 aatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaaca-tacttgttttggatggttaaccatt 175  Q
    ||||||||||||||||||| || |||||||||||| ||||| ||||||| |||| | ||| ||||||||||| |||||||||    
T  13967923 aatataagatgttattttttatcaagtaatgattatacaactttttcataaaaaaattacatgttttggatgtttaaccatt 13967842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 91 - 177
Target Start/End: Original strand, 55126809 - 55126896
Alignment:
Q  91 tgaaaatataagatgtta-tttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgc 177  Q
    ||||||||||| |||||| ||||||||||| ||||||||||||||| ||||||| ||||| || || |||| |||  |||||||||||    
T  55126809 tgaaaatataaaatgttactttttgataaaataatgattacacaactttttcataaaaacttatttattttagatacttaaccattgc 55126896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 91 - 173
Target Start/End: Original strand, 12076459 - 12076541
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaacca 173  Q
    |||||||||||||||||| ||||||| ||| |||||| ||||||  |||| |||| ||| |||||||||| |||| |||||||    
T  12076459 tgaaaatataagatgttaattttgatcaagcaatgatcacacaattttttgatgagaacttacttgttttagatgtttaacca 12076541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 154
Target Start/End: Original strand, 31089819 - 31089878
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatact 154  Q
    |||||||| |||||| |||||||||||||||||||||||||| ||||||| ||||| ||||    
T  31089819 aaatataa-atgttacttttgataaagtaatgattacacaactttttcataaaaacttact 31089878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 42595215 - 42595267
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcat 143  Q
    ||||||||||| |||||| |||||||||||||||||||||||||  |||||||    
T  42595215 tgaaaatataaaatgttacttttgataaagtaatgattacacaattttttcat 42595267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 173
Target Start/End: Complemental strand, 27133628 - 27133549
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaacca 173  Q
    ||||||||||| ||||||||| | |||||||||||| ||||| ||||||| ||||| ||| | |||| |||| |||||||    
T  27133628 aaatataagatattatttttgttcaagtaatgattatacaactttttcataaaaacttacctattttagatgcttaacca 27133549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 31861462 - 31861513
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacattttcatga 145  Q
    ||||||||||||||| ||||||| |||||||||||||||||  |||||||||    
T  31861462 aaatataagatgttacttttgatcaagtaatgattacacaaatttttcatga 31861513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 140
Target Start/End: Complemental strand, 37183117 - 37183071
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacatttt 140  Q
    |||||||| |||||||||||||| ||||||||||||||||| |||||    
T  37183117 aaatataatatgttatttttgatcaagtaatgattacacaaaatttt 37183071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 3708771 - 3708722
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacattttcat 143  Q
    |||| ||| |||||||||||||| |||||||||||||||||| |||||||    
T  3708771 aaatttaatatgttatttttgatcaagtaatgattacacaactttttcat 3708722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 191
Target Start/End: Complemental strand, 28176854 - 28176758
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttggggcactgg 191  Q
    ||||||||||| ||||||| |||||| ||||||||||||| | ||||||| ||||| |  ||||||| |||| ||||| ||  |||||| ||||||||    
T  28176854 aaatataagatattatttt-gataaaataatgattacacatctttttcattaaaacttcattgttttagatgcttaactatgacccttgtggcactgg 28176758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 159
Target Start/End: Original strand, 2565442 - 2565510
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttt 159  Q
    |||||| |||| |||||| ||||||| |||||||||||||||||| |||  || ||||| |||||||||    
T  2565442 tgaaaacataaaatgttacttttgatcaagtaatgattacacaacttttctataaaaacttacttgttt 2565510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 190
Target Start/End: Original strand, 16341136 - 16341232
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttggggcactg 190  Q
    |||||||| |||||| ||||||| |||||||||||||| ||  ||||||| ||||  || || ||||||||| ||||||| || | ||||| |||||    
T  16341136 aaatataaaatgttacttttgattaagtaatgattacataattttttcataaaaatttatttattttggatgtttaaccaatgtctttgggacactg 16341232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 181
Target Start/End: Original strand, 52837317 - 52837388
Alignment:
Q  110 ttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgccctt 181  Q
    ||||||| | ||||| |||||||||| ||||||| ||||  | ||||||||||||| ||||||| |||||||    
T  52837317 ttttgatcacgtaattattacacaactttttcataaaaattttcttgttttggatgcttaaccaatgccctt 52837388  T

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Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 130
Target Start/End: Original strand, 22611930 - 22611967
Alignment:
Q  93 aaaatataagatgttatttttgataaagtaatgattac 130  Q
    |||||||||||||||| ||| |||||||||||||||||    
T  22611930 aaaatataagatgttactttcgataaagtaatgattac 22611967  T

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Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 159
Target Start/End: Complemental strand, 44190301 - 44190235
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttt 159  Q
    |||||||||||||||||| ||||||| ||||||| |||||| ||| | |||  |||||| |||||||||    
T  44190301 tgaaaatataagatgttacttttgatcaagtaataattacataacttattc--gaaaacttacttgttt 44190235  T

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Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 170
Target Start/End: Complemental strand, 46399902 - 46399841
Alignment:
Q  109 tttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaa 170  Q
    ||||||||||||||||||| ||||||  ||||||| ||||| || |||||||| ||| ||||    
T  46399902 tttttgataaagtaatgatcacacaattttttcataaaaacttatttgttttgtatgcttaa 46399841  T

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Target: scaffold0002 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 91 - 175
Target Start/End: Complemental strand, 120751 - 120667
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccatt 175  Q
    |||||||||||||||| | ||||| |||||||| |||| |||||| ||| ||  ||||| ||||| ||||||||| |||||||||    
T  120751 tgaaaatataagatgtcacttttggtaaagtaacgattgcacaacttttccacaaaaacttacttattttggatgtttaaccatt 120667  T

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Target: scaffold0039 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 178
Target Start/End: Original strand, 30018 - 30105
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcc 178  Q
    |||||||||||||||||| |||| || || |||| |||||||||  ||||||| ||||| |||||||||||  || ||||||| ||||    
T  30018 tgaaaatataagatgttacttttaattaaataataattacacaaacttttcataaaaacttacttgttttgagtgtttaaccaatgcc 30105  T

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Target: scaffold0283 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 91 - 148
Target Start/End: Complemental strand, 3407 - 3350
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaa 148  Q
    ||||||||||| |||||| ||||||||||||| |||||| ||||| ||||||| ||||    
T  3407 tgaaaatataaaatgttacttttgataaagtattgattatacaactttttcataaaaa 3350  T

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Target: scaffold0079 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 190
Target Start/End: Complemental strand, 51725 - 51629
Alignment:
Q  94 aaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaaccattgcccttggggcactg 190  Q
    |||||||| |||||| ||||||| |||||||||||||| ||  ||||||| ||||  || || ||||||||| ||||||| || | ||||| |||||    
T  51725 aaatataaaatgttacttttgattaagtaatgattacataattttttcataaaaatttatttattttggatgtttaaccaatgtctttgggacactg 51629  T

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Target: scaffold0204 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 173
Target Start/End: Original strand, 15397 - 15479
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacattttcatgaaaacatacttgttttggatggttaacca 173  Q
    |||||||||||||||||| ||||||  |||||| ||||| |||   ||||||| ||||| ||||| ||||| ||| |||||||    
T  15397 tgaaaatataagatgttacttttgaccaagtaacgattatacacatttttcataaaaacttacttattttgaatgtttaacca 15479  T

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Target: scaffold0103 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 171
Target Start/End: Original strand, 28885 - 28962
Alignment:
Q  96 atataagatgttatttttgataaagtaatgattacacaac-attttcatgaaaaca-tacttgttttggatggttaac 171  Q
    |||||| ||||| |||||||||||||||||||||||| ||  |||| || |||| | ||||||||||||||| |||||    
T  28885 atataatatgttctttttgataaagtaatgattacaccactttttttataaaaaaattacttgttttggatgcttaac 28962  T

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Target: scaffold0036 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 140
Target Start/End: Complemental strand, 36614 - 36565
Alignment:
Q  91 tgaaaatataagatgttatttttgataaagtaatgattacacaacatttt 140  Q
    |||||||||||||||||| ||||||| || ||||||||| ||||| ||||    
T  36614 tgaaaatataagatgttacttttgattaaataatgattatacaacttttt 36565  T

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