View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7415_low_32 (Length: 312)
Name: NF7415_low_32
Description: NF7415
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7415_low_32 |
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Alignment Details
Target: chr2 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 12 - 293
Target Start/End: Original strand, 35403348 - 35403629
Alignment:
| Q |
12 |
tgagaagaaagagtcatcaaatttcctaaagctaaagttaagtcgagattcagaaagtgatcaagaaaccaatacgatactttctctttcattgttctct |
111 |
Q |
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| T |
35403348 |
tgagaagaaagagtcatcaaatttcctaaaactaaagttaagtcgagattcagaaagtgatcaagaaaccaatacgatactttctctttcattattctct |
35403447 |
T |
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| Q |
112 |
tcatcctccaaatcaaagtgatgagaaacaatattagtgaaaaacacacataaaagacccatgttgagcacatttatgtcatttgggctgagtacttaag |
211 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35403448 |
tcatcctccaattcaaagtgatgagaaacaatattagtgaaaaacacacataaaagacccatgttgagcacatttatgtcatttgggctgagtacttaag |
35403547 |
T |
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| Q |
212 |
atctgaccatgtcaaatagagcattggagtgagatcttttaagtacttgctttattggaccacgtttatatatgcatgcaag |
293 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35403548 |
atctgaccatgtcaaatagagcattggagtgagatcttttaagtacttgctttattggaccacgtttatatatgcatgcaag |
35403629 |
T |
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