View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7415_low_33 (Length: 311)

Name: NF7415_low_33
Description: NF7415
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7415_low_33
NF7415_low_33
[»] chr2 (13 HSPs)
chr2 (1-296)||(43943436-43943732)
chr2 (1-107)||(41181370-41181480)
chr2 (1-75)||(45475409-45475483)
chr2 (1-106)||(35493371-35493480)
chr2 (1-103)||(2917620-2917726)
chr2 (2-72)||(2648770-2648840)
chr2 (1-77)||(1096562-1096638)
chr2 (1-57)||(9660085-9660141)
chr2 (1-67)||(12905526-12905592)
chr2 (1-67)||(27276404-27276470)
chr2 (1-67)||(35490657-35490723)
chr2 (1-67)||(43950272-43950337)
chr2 (2-67)||(8268780-8268845)
[»] chr3 (26 HSPs)
chr3 (1-106)||(7247890-7247999)
chr3 (1-106)||(41579754-41579863)
chr3 (1-106)||(2432973-2433082)
chr3 (1-75)||(28611130-28611204)
chr3 (1-79)||(45101878-45101956)
chr3 (1-79)||(46344902-46344980)
chr3 (2-103)||(52570597-52570701)
chr3 (1-79)||(19440221-19440299)
chr3 (1-108)||(19454355-19454466)
chr3 (1-79)||(29918371-29918449)
chr3 (1-79)||(29929391-29929469)
chr3 (1-79)||(29967524-29967602)
chr3 (1-79)||(29978545-29978623)
chr3 (1-67)||(34691602-34691668)
chr3 (2-67)||(66878-66942)
chr3 (1-103)||(30256033-30256139)
chr3 (1-74)||(43571715-43571788)
chr3 (2-57)||(7839530-7839585)
chr3 (2-57)||(19341625-19341680)
chr3 (1-67)||(41802975-41803041)
chr3 (1-67)||(49219821-49219887)
chr3 (1-67)||(55207693-55207759)
chr3 (35-76)||(42807664-42807705)
chr3 (35-67)||(7843081-7843113)
chr3 (1-45)||(20366191-20366235)
chr3 (1-106)||(52567697-52567806)
[»] chr5 (13 HSPs)
chr5 (1-134)||(18538365-18538502)
chr5 (1-106)||(18310051-18310160)
chr5 (1-106)||(20192287-20192396)
chr5 (1-106)||(20200178-20200287)
chr5 (2-106)||(3603179-3603287)
chr5 (1-79)||(33995178-33995256)
chr5 (1-79)||(41201693-41201771)
chr5 (1-74)||(25499917-25499990)
chr5 (3-67)||(1398581-1398645)
chr5 (1-80)||(24053144-24053223)
chr5 (1-67)||(34122501-34122567)
chr5 (1-108)||(34682189-34682300)
chr5 (1-62)||(1397380-1397441)
[»] chr1 (20 HSPs)
chr1 (1-106)||(46141716-46141825)
chr1 (1-103)||(46973141-46973247)
chr1 (2-106)||(6437570-6437678)
chr1 (3-103)||(13173773-13173876)
chr1 (1-79)||(4515991-4516074)
chr1 (1-79)||(36908543-36908621)
chr1 (1-79)||(41804063-41804141)
chr1 (35-83)||(25040140-25040188)
chr1 (4-79)||(35521579-35521654)
chr1 (2-67)||(19054036-19054101)
chr1 (1-106)||(18975150-18975259)
chr1 (1-106)||(49927543-49927652)
chr1 (1-67)||(6562191-6562257)
chr1 (1-67)||(23272826-23272892)
chr1 (1-67)||(23276138-23276204)
chr1 (1-67)||(27485036-27485102)
chr1 (1-67)||(30905748-30905814)
chr1 (1-79)||(26633495-26633570)
chr1 (1-57)||(51288874-51288930)
chr1 (1-45)||(51337543-51337587)
[»] chr7 (15 HSPs)
chr7 (2-106)||(48314608-48314715)
chr7 (1-106)||(21185553-21185662)
chr7 (1-106)||(46863374-46863483)
chr7 (1-103)||(9494836-9494942)
chr7 (2-79)||(46860476-46860553)
chr7 (1-106)||(28980203-28980312)
chr7 (1-106)||(34622433-34622542)
chr7 (1-67)||(27453624-27453690)
chr7 (1-78)||(10705214-10705291)
chr7 (1-78)||(37340268-37340345)
chr7 (1-106)||(36392059-36392168)
chr7 (1-43)||(21188430-21188472)
chr7 (1-67)||(30355269-30355335)
chr7 (1-79)||(47060892-47060969)
chr7 (38-79)||(36185801-36185842)
[»] chr4 (14 HSPs)
chr4 (1-103)||(29700332-29700438)
chr4 (1-103)||(4768615-4768721)
chr4 (1-106)||(49572930-49573039)
chr4 (1-67)||(34154432-34154498)
chr4 (1-103)||(37959750-37959856)
chr4 (1-79)||(955757-955835)
chr4 (1-67)||(11494521-11494586)
chr4 (1-67)||(21472514-21472580)
chr4 (1-79)||(958624-958701)
chr4 (1-67)||(9889971-9890037)
chr4 (5-75)||(18578618-18578688)
chr4 (4-78)||(51426503-51426577)
chr4 (3-79)||(21470868-21470944)
chr4 (1-57)||(50274747-50274803)
[»] chr8 (12 HSPs)
chr8 (1-106)||(18438568-18438677)
chr8 (1-103)||(7168025-7168131)
chr8 (1-106)||(18441471-18441580)
chr8 (1-76)||(38872960-38873035)
chr8 (1-106)||(41858151-41858260)
chr8 (1-75)||(22577634-22577708)
chr8 (24-67)||(35966802-35966845)
chr8 (2-52)||(21406259-21406309)
chr8 (2-52)||(21800751-21800801)
chr8 (1-67)||(42602437-42602503)
chr8 (1-49)||(18205781-18205829)
chr8 (1-77)||(45454373-45454449)
[»] chr6 (10 HSPs)
chr6 (1-105)||(13404662-13404770)
chr6 (5-79)||(12783991-12784065)
chr6 (1-67)||(35021293-35021359)
chr6 (1-103)||(13479663-13479769)
chr6 (4-67)||(23958867-23958930)
chr6 (1-75)||(23986011-23986085)
chr6 (1-57)||(13401473-13401529)
chr6 (1-106)||(25141109-25141218)
chr6 (4-57)||(31768740-31768793)
chr6 (1-57)||(7361178-7361234)
[»] scaffold0388 (1 HSPs)
scaffold0388 (1-74)||(11740-11813)
[»] scaffold0618 (1 HSPs)
scaffold0618 (1-79)||(3851-3928)
[»] scaffold0341 (1 HSPs)
scaffold0341 (1-67)||(17381-17447)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-67)||(232525-232591)


Alignment Details
Target: chr2 (Bit Score: 201; Significance: 1e-109; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 1 - 296
Target Start/End: Complemental strand, 43943732 - 43943436
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctcggctgcaatgtgtcaacaaca 100  Q
    |||||||||||||||||||||| ||||||||  ||||||||||| ||||||  ||||| ||||||||||||||||| || ||||||||||||||||||||    
T  43943732 cagttaactgcagccggttattaaattcctcgagagttaactgctgagggggaaaaatcgtattttatttgtgtgcttcagctgcaatgtgtcaacaaca 43943633  T
Q  101 attctccacttaatttgggtcggagagagtaatagnnnnnnnnn-cttcggagagagtaatagnnnnnnnaataagacagtattatcactaacgtaaatt 199  Q
    |||||||||||||||||||||||||||||||||||          ||||||||||||||||||       ||||||||||||||||||||||||||||||    
T  43943632 attctccacttaatttgggtcggagagagtaatagttttttttttcttcggagagagtaatagtttttttaataagacagtattatcactaacgtaaatt 43943533  T
Q  200 tcttagcctcttaaaaaattgtctattgattcattaactagtgctataccaggtagtctcacactcgacccccatgtgatgtgagaatagtgcaaag 296  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43943532 tcttagcctcttaaaaaattgtctattgattcattaactagtgctatagcaggtagtctcacactcgacccccatgtgatgtgagaatagtgcaaag 43943436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 41181480 - 41181370
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctcggc----tgcaatgtgtcaac 96  Q
    ||||||| || |||||||||||||||||||| | ||||||||||||||||| |||||  |||||||| | ||||||||| ||    ||||||||||||||    
T  41181480 cagttaaatgtagccggttattgaattcctcggcagttaactgccgagggggcaaaaacgtattttactcgtgtgcctcagccttatgcaatgtgtcaac 41181381  T
Q  97 aacaattctcc 107  Q
    | |||||||||    
T  41181380 atcaattctcc 41181370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 45475483 - 45475409
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtg 75  Q
    |||||||||| |||||||| ||||||| ||| | ||||||||||||||||| |||||| |||||||| |||||||    
T  45475483 cagttaactgtagccggtttttgaatttctcggcagttaactgccgagggggcaaaatcgtattttacttgtgtg 45475409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 35493371 - 35493480
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctcggc----tgcaatgtgtcaac 96  Q
    |||||||||||||| |||| ||||||||||| | |||||||| |||||||| |||||  |||||||| | ||||| |||  |    ||||||||||||||    
T  35493371 cagttaactgcagctggtttttgaattcctcggcagttaactaccgagggggcaaaagcgtattttactcgtgtgtctcaaccttatgcaatgtgtcaac 35493470  T
Q  97 aacaattctc 106  Q
    ||||||||||    
T  35493471 aacaattctc 35493480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 2917726 - 2917620
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctcggc----tgcaatgtgtcaac 96  Q
    |||||||||| |||||||| || |||| ||| | ||||||||||||||||| |||||  |||||||| || |||||||| ||    || |||||||||||    
T  2917726 cagttaactgtagccggtttttcaatttctcggcagttaactgccgagggggcaaaaacgtattttacttttgtgcctcagccttatgaaatgtgtcaac 2917627  T
Q  97 aacaatt 103  Q
    |||||||    
T  2917626 aacaatt 2917620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 2648840 - 2648770
Alignment:
Q  2 agttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgt 72  Q
    |||||||||||||||||| ||||||||||  | |||||||||||||| || |||||  ||||||| |||||    
T  2648840 agttaactgcagccggtttttgaattccttggcagttaactgccgagagggcaaaagcgtattttttttgt 2648770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 1096638 - 1096562
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcc 77  Q
    ||||||||||||||||| | |  |||||||| | ||||||| ||||||||| |||||| |||||||| | |||||||    
T  1096638 cagttaactgcagccggatttcaaattcctcggcagttaacagccgagggggcaaaatcgtattttactagtgtgcc 1096562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 9660085 - 9660141
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaa 57  Q
    |||| |||||||||||||||||| ||||||| | |||||||||||||| || |||||    
T  9660085 cagtcaactgcagccggttattgtattcctcggcagttaactgccgagagggcaaaa 9660141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 12905592 - 12905526
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtatttta 67  Q
    |||||||||||||||| || || |||| ||| | |||||||||||||||||| ||||  ||||||||    
T  12905592 cagttaactgcagccgatttttcaatttctcggcagttaactgccgaggggaaaaaagcgtatttta 12905526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 27276404 - 27276470
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtatttta 67  Q
    ||||||||||||||||| | |  |||||||| | |||||||||||||||||  ||||| ||||||||    
T  27276404 cagttaactgcagccggatttcaaattcctcagcagttaactgccgagggggtaaaatcgtatttta 27276470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 35490723 - 35490657
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtatttta 67  Q
    ||||||||||||||||||| |||||||| || | ||||||| | ||||| | ||||| |||||||||    
T  35490723 cagttaactgcagccggtttttgaattcttcggcagttaaccgtcgaggaggcaaaaatgtatttta 35490657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 43950272 - 43950337
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtatttta 67  Q
    ||||||| ||||| ||||| ||||||||| | | ||||||||||||||||| ||||| |||||||||    
T  43950272 cagttaattgcagtcggtt-ttgaattccacagcagttaactgccgagggggcaaaaatgtatttta 43950337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 8268780 - 8268845
Alignment:
Q  2 agttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtatttta 67  Q
    |||||| |||||||| || ||| ||||||    |||||||||||||||||||||||| ||||||||    
T  8268780 agttaattgcagccgatttttgcattccttaacagttaactgccgaggggacaaaatcgtatttta 8268845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 3e-26; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 7247890 - 7247999
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctcggc----tgcaatgtgtcaac 96  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||  |||||||||| ||||||||| ||    | ||||||||||||    
T  7247890 cagttaactgcagccggttattgaattcctcggcagttaactgccgagggggcaaaagcgtattttattcgtgtgcctcagccttatccaatgtgtcaac 7247989  T
Q  97 aacaattctc 106  Q
    ||||||||||    
T  7247990 aacaattctc 7247999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 41579754 - 41579863
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctcggc----tgcaatgtgtcaac 96  Q
    ||||||||||||||||||||||||||||||| | | |||||||||||||||  ||||| |||||||| || |||||||| ||    ||||| ||||||||    
T  41579754 cagttaactgcagccggttattgaattcctcagcaattaactgccgagggggaaaaatcgtattttacttatgtgcctcagccttatgcaacgtgtcaac 41579853  T
Q  97 aacaattctc 106  Q
    ||||||||||    
T  41579854 aacaattctc 41579863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 2432973 - 2433082
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctcggc----tgcaatgtgtcaac 96  Q
    |||||||||| | ||||||||||||||||||   |||||||||||||||||| ||||  |||||||| | ||||||||| ||    ||||||||||||||    
T  2432973 cagttaactgtatccggttattgaattcctcgacagttaactgccgaggggataaaagcgtattttactcgtgtgcctcagccttatgcaatgtgtcaac 2433072  T
Q  97 aacaattctc 106  Q
    ||||||||||    
T  2433073 aacaattctc 2433082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 28611130 - 28611204
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtg 75  Q
    ||||||||||||||||||| ||||||| ||| | ||||||||||||||||| ||||||| ||||||| |||||||    
T  28611130 cagttaactgcagccggtttttgaatttctcggcagttaactgccgagggggcaaaattatattttacttgtgtg 28611204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 45101878 - 45101956
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctc 79  Q
    ||||||||||||||||||| |||||||||||   | |||||||||||||||| ||||  |||||||| || ||||||||    
T  45101878 cagttaactgcagccggtttttgaattcctcaacaattaactgccgaggggataaaaacgtattttacttatgtgcctc 45101956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 46344980 - 46344902
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctc 79  Q
    |||||||||||||||| || |||||||||||   ||||||||||||||||| |||||   ||||||| |||||||||||    
T  46344980 cagttaactgcagccgatttttgaattcctcgacagttaactgccgagggggcaaaaaaatattttacttgtgtgcctc 46344902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 2 - 103
Target Start/End: Original strand, 52570597 - 52570701
Alignment:
Q  2 agttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctcggc----tgcaatgtgtcaaca 97  Q
    |||||||||||| ||||| |||||||| || | |||||||||||||||||| ||||  |||||||| | ||||||||| ||    ||||||||||||||     
T  52570597 agttaactgcagtcggtttttgaattcttcggcagttaactgccgagggga-aaaaacgtattttaatcgtgtgcctcagccttatgcaatgtgtcaacg 52570695  T
Q  98 acaatt 103  Q
    ||||||    
T  52570696 acaatt 52570701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 19440299 - 19440221
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctc 79  Q
    |||||||||||||||||||  ||||||| || | ||||||||||||||| | ||||| | ||||||| | |||||||||    
T  19440299 cagttaactgcagccggtttatgaattcttcggcagttaactgccgaggaggcaaaagtttattttactcgtgtgcctc 19440221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 19454355 - 19454466
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctcggc----tgcaatgtgtcaac 96  Q
    |||||||||||| ||| || ||||||||||| | |||||||||||||| || |||||  |||||||| | ||||| |||  |    |||||||| |||||    
T  19454355 cagttaactgcaaccgatttttgaattcctcagcagttaactgccgagagggcaaaagcgtattttactcgtgtgtctcaaccttatgcaatgtatcaac 19454454  T
Q  97 aacaattctcca 108  Q
    ||||||||||||    
T  19454455 aacaattctcca 19454466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 29918371 - 29918449
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctc 79  Q
    ||||||||||||||||||| | |||||  || | |||||| |||||||||| |||||| |||||||| || ||||||||    
T  29918371 cagttaactgcagccggttttcgaattattcggcagttaattgccgaggggccaaaatcgtattttacttatgtgcctc 29918449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 29929469 - 29929391
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctc 79  Q
    ||||||| ||||||||||| |||||||||||   ||||||||| ||||||  ||||||  ||||||| |||||||||||    
T  29929469 cagttaattgcagccggtttttgaattcctcaacagttaactgtcgagggagcaaaatcatattttacttgtgtgcctc 29929391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 29967524 - 29967602
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctc 79  Q
    ||||||||||||||||||| | |||||  || | |||||| |||||||||| |||||| |||||||| || ||||||||    
T  29967524 cagttaactgcagccggttttcgaattattcggcagttaattgccgaggggccaaaatcgtattttacttatgtgcctc 29967602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 29978623 - 29978545
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctc 79  Q
    ||||||| ||||||||||| |||||||||||   ||||||||| ||||||  ||||||  ||||||| |||||||||||    
T  29978623 cagttaattgcagccggtttttgaattcctcaacagttaactgtcgagggagcaaaatcatattttacttgtgtgcctc 29978545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 34691668 - 34691602
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtatttta 67  Q
    ||||||||||||||||| | || | |||||| | ||||||||||||||| | |||||||||||||||    
T  34691668 cagttaactgcagccggatttttatttcctcggcagttaactgccgaggaggcaaaattgtatttta 34691602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 66942 - 66878
Alignment:
Q  2 agttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtatttta 67  Q
    |||||||||||||||||| |||||| |||| | ||||||||||||||||| |||||  ||||||||    
T  66942 agttaactgcagccggtt-ttgaatacctcggcagttaactgccgagggggcaaaagcgtatttta 66878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 30256033 - 30256139
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctcggc----tgcaatgtgtcaac 96  Q
    ||||||||||||||||||| || |||||||| | |||||||| || ||||| ||    ||||||||| ||||||||||| ||    || |||||||||||    
T  30256033 cagttaactgcagccggttttttaattcctcggcagttaactaccaagggggcatttatgtattttacttgtgtgcctcagctttatgaaatgtgtcaac 30256132  T
Q  97 aacaatt 103  Q
    |||||||    
T  30256133 aacaatt 30256139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 43571715 - 43571788
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgt 74  Q
    ||||||||||||||||  | ||||||||||| | ||||||||||||||||| |||||   ||||||| ||||||    
T  43571715 cagttaactgcagccgacttttgaattcctcagcagttaactgccgagggggcaaaaacatattttacttgtgt 43571788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 7839530 - 7839585
Alignment:
Q  2 agttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaa 57  Q
    |||||||||||||||||| |||||||||||   |||| |||||||||||| |||||    
T  7839530 agttaactgcagccggtttttgaattcctcgacagtttactgccgagggggcaaaa 7839585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 19341625 - 19341680
Alignment:
Q  2 agttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaa 57  Q
    |||||||||||||||| | |  |||||||| | |||||||||||||||||||||||    
T  19341625 agttaactgcagccggatttctaattcctcggcagttaactgccgaggggacaaaa 19341680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 41803041 - 41802975
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtatttta 67  Q
    ||||||||||||||||||| || ||||| || | |||||||||||||| || |||||  ||||||||    
T  41803041 cagttaactgcagccggtttttaaattcttcggcagttaactgccgagtgggcaaaaacgtatttta 41802975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 49219821 - 49219887
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtatttta 67  Q
    ||||||||||||||||| | |  |||||||| | |||||||| |||||| | |||||||||||||||    
T  49219821 cagttaactgcagccggatttctaattcctcggcagttaactaccgaggaggcaaaattgtatttta 49219887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 55207693 - 55207759
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtatttta 67  Q
    |||||||||||| |||||| |||||||| || | ||||||||||||| ||| |||||  ||||||||    
T  55207693 cagttaactgcaaccggtttttgaattcttcggcagttaactgccgatggggcaaaagagtatttta 55207759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 42807664 - 42807705
Alignment:
Q  35 agttaactgccgaggggacaaaattgtattttatttgtgtgc 76  Q
    ||||||||||||||| | ||||| ||||||||||||||||||    
T  42807664 agttaactgccgaggaggcaaaaatgtattttatttgtgtgc 42807705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 67
Target Start/End: Original strand, 7843081 - 7843113
Alignment:
Q  35 agttaactgccgaggggacaaaattgtatttta 67  Q
    |||||||||||||||||| ||||||||||||||    
T  7843081 agttaactgccgaggggataaaattgtatttta 7843113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 20366235 - 20366191
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgcc 45  Q
    |||||||||||||| |||| ||||||||||| | |||||||||||    
T  20366235 cagttaactgcagctggtttttgaattcctcggcagttaactgcc 20366191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 52567806 - 52567697
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctcggc----tgcaatgtgtcaac 96  Q
    ||||||| |||||||| || |||||||  || | ||||||||||||||  | |||||| |||||||| | ||||||||| ||    ||||| || |||||    
T  52567806 cagttaagtgcagccgatttttgaattattcggcagttaactgccgagaaggcaaaatcgtattttactcgtgtgcctcagccttatgcaacgtatcaac 52567707  T
Q  97 aacaattctc 106  Q
    ||||||||||    
T  52567706 aacaattctc 52567697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 8e-24; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 18538365 - 18538502
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctcggc----tgcaatgtgtcaac 96  Q
    ||||||||||||||||||| |||||||||||   | ||||||||||||||| |||||| |||||||| ||||||||||| ||    || |||||||||||    
T  18538365 cagttaactgcagccggtttttgaattcctcgacaattaactgccgagggggcaaaatcgtattttacttgtgtgcctcagcctaatgaaatgtgtcaac 18538464  T
Q  97 aacaattctccacttaatttgggtcggagagagtaata 134  Q
    ||||||| |||||||| ||| || ||||  ||||||||    
T  18538465 aacaattttccacttatttttggacggaaggagtaata 18538502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 18310051 - 18310160
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctcggc----tgcaatgtgtcaac 96  Q
    ||||||||||||| |||||||||||||||||   |||||||||| |||| | |||||  |||||||| ||||||||||| ||    ||||||||||||||    
T  18310051 cagttaactgcagtcggttattgaattcctcgacagttaactgctgaggaggcaaaaacgtattttacttgtgtgcctcagccttatgcaatgtgtcaac 18310150  T
Q  97 aacaattctc 106  Q
    ||||||||||    
T  18310151 aacaattctc 18310160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 20192396 - 20192287
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctcggc----tgcaatgtgtcaac 96  Q
    |||||||||||||||| ||||||||||| || | ||||||||| ||| ||| |||||| |||||||| ||||||||||| ||    || |||||||||||    
T  20192396 cagttaactgcagccgattattgaattcttcagcagttaactgacgaaggggcaaaatcgtattttacttgtgtgcctcagccttatgaaatgtgtcaac 20192297  T
Q  97 aacaattctc 106  Q
    ||||||||||    
T  20192296 aacaattctc 20192287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 20200178 - 20200287
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctcggc----tgcaatgtgtcaac 96  Q
    |||||||||||||  |||||||||||| ||    ||||||||||||| ||| |||||  |||||||||||||||||||| ||    ||||||||||||||    
T  20200178 cagttaactgcagttggttattgaatttcttgacagttaactgccgatggggcaaaaacgtattttatttgtgtgcctcagccttatgcaatgtgtcaac 20200277  T
Q  97 aacaattctc 106  Q
    ||||||||||    
T  20200278 aacaattctc 20200287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 3603179 - 3603287
Alignment:
Q  2 agttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctcggc----tgcaatgtgtcaaca 97  Q
    |||||||||||||| |||||||||||| || | ||||||||| ||||||  |||||  |||||||| || |||||||| ||    |||||||||||||||    
T  3603179 agttaactgcagccagttattgaattcttcggcagttaactgtcgagggagcaaaaacgtattttacttatgtgcctcagccttatgcaatgtgtcaaca 3603278  T
Q  98 acaattctc 106  Q
    |||||||||    
T  3603279 acaattctc 3603287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 33995178 - 33995256
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctc 79  Q
    ||||||| |||| ||| || ||||||| ||| | ||||||||| |||||||| |||||||||||||| |||||||||||    
T  33995178 cagttaattgcatccgatttttgaatttctcggcagttaactgtcgaggggataaaattgtattttacttgtgtgcctc 33995256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 41201771 - 41201693
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctc 79  Q
    |||||||||||||||||||||||||||||||   | |||| || |||| ||||||||| |||||||| | |||||||||    
T  41201771 cagttaactgcagccggttattgaattcctcgacaattaattgtcgagaggacaaaatcgtattttactcgtgtgcctc 41201693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 25499917 - 25499990
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgt 74  Q
    |||||||| ||| |||||| |||||||||||   ||||||||||||||||| |||||  |||||||| ||||||    
T  25499917 cagttaaccgcaaccggtttttgaattcctcgatagttaactgccgagggggcaaaagcgtattttacttgtgt 25499990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 1398645 - 1398581
Alignment:
Q  3 gttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtatttta 67  Q
    |||||||||| |||||||||||||||||| | ||||||||| ||| ||  ||||| |||||||||    
T  1398645 gttaactgcaaccggttattgaattcctcggcagttaactgtcgaaggagcaaaagtgtatttta 1398581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 24053223 - 24053144
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctcg 80  Q
    ||||||||||||| ||||| ||||||| ||| | | |||||||||||| | ||||||  ||||||||||| |||| ||||    
T  24053223 cagttaactgcagacggtttttgaattactcggcatttaactgccgagagaacaaaaacgtattttatttatgtgtctcg 24053144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 34122567 - 34122501
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtatttta 67  Q
    ||||||||||||||||| | |  |||||||| | ||||||||||||| ||| |||||| ||||||||    
T  34122567 cagttaactgcagccggatttcaaattcctcggcagttaactgccgaaggggcaaaatcgtatttta 34122501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 34682300 - 34682189
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctcggc----tgcaatgtgtcaac 96  Q
    ||||||||||||||||||| |||||||||||   ||||||||| | ||||  |||||  |||||||| |||||  |||| ||    || |||||||||||    
T  34682300 cagttaactgcagccggtttttgaattcctcgacagttaactgtcaagggagcaaaagcgtattttacttgtgaacctcagccttatgaaatgtgtcaac 34682201  T
Q  97 aacaattctcca 108  Q
    ||||||| ||||    
T  34682200 aacaattttcca 34682189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 1397380 - 1397441
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgta 62  Q
    ||||||||||||||||| | |  |||||||| | ||||||||||||||||| ||||| ||||    
T  1397380 cagttaactgcagccggatttctaattcctcagcagttaactgccgagggggcaaaaatgta 1397441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 8e-24; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 46141825 - 46141716
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctcggc----tgcaatgtgtcaac 96  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||| || |||||| |||||||| |||||| |||| ||    |||||| |||||||    
T  46141825 cagttaactgcagccggttattgaattcctcggcagttaactgccgagagggcaaaatcgtattttacttgtgtacctcagccttatgcaatatgtcaac 46141726  T
Q  97 aacaattctc 106  Q
    ||||||||||    
T  46141725 aacaattctc 46141716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 46973247 - 46973141
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctcggc----tgcaatgtgtcaac 96  Q
    ||||||||||||||||||| ||||||||||| | ||||||||||| ||||| |||||| |||||||| ||||||| ||| ||    || |||||||||||    
T  46973247 cagttaactgcagccggtttttgaattcctcggcagttaactgccaagggggcaaaatcgtattttacttgtgtgtctcagcctaatgaaatgtgtcaac 46973148  T
Q  97 aacaatt 103  Q
    |||||||    
T  46973147 aacaatt 46973141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 6437570 - 6437678
Alignment:
Q  2 agttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctcggc----tgcaatgtgtcaaca 97  Q
    |||||||||||| || ||||||| |||||| | |||||||||||||| || |||||  |||||||| ||||||||||| ||    |||||||||||||||    
T  6437570 agttaactgcagtcgattattgacttcctcggcagttaactgccgagagggcaaaagcgtattttacttgtgtgcctcagctttatgcaatgtgtcaaca 6437669  T
Q  98 acaattctc 106  Q
    |||||||||    
T  6437670 acaattctc 6437678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 13173876 - 13173773
Alignment:
Q  3 gttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctcggc----tgcaatgtgtcaacaa 98  Q
    ||||||||||||||||| ||||||||| | | ||||||||||||||||| |||||| |||||||| ||||||||||| ||    || |||||||||||||    
T  13173876 gttaactgcagccggtttttgaattcc-cagcagttaactgccgagggggcaaaatagtattttacttgtgtgcctcagccttatgaaatgtgtcaacaa 13173778  T
Q  99 caatt 103  Q
    |||||    
T  13173777 caatt 13173773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 4516074 - 4515991
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaac-----tgccgaggggacaaaattgtattttatttgtgtgcctc 79  Q
    ||||||||||||||||||| ||||||||||| | |||||||     ||||||||||||||||| |||||||| |||||||||||    
T  4516074 cagttaactgcagccggtttttgaattcctcggcagttaactgccctgccgaggggacaaaatcgtattttacttgtgtgcctc 4515991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 36908621 - 36908543
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctc 79  Q
    ||||||||||||||||||| |||||||| ||   ||||||||||||||| | ||||| ||||||||| |||||||||||    
T  36908621 cagttaactgcagccggtttttgaattcttcgacagttaactgccgaggaggcaaaaatgtattttacttgtgtgcctc 36908543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 41804063 - 41804141
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctc 79  Q
    ||||||||||||| ||||| ||||||||||| | ||||||||||||| ||| |||||  |||||||| |||||||||||    
T  41804063 cagttaactgcagtcggtttttgaattcctcggcagttaactgccgaaggggcaaaagcgtattttacttgtgtgcctc 41804141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 35 - 83
Target Start/End: Original strand, 25040140 - 25040188
Alignment:
Q  35 agttaactgccgaggggacaaaattgtattttatttgtgtgcctcggct 83  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  25040140 agttaactgccgaagggacaaaattgtattttacttgtgtgcctcggct 25040188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 79
Target Start/End: Complemental strand, 35521654 - 35521579
Alignment:
Q  4 ttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctc 79  Q
    |||||||||||||||| || | |||||| | |||||||||||||| || |||||| |||||||| |||||||||||    
T  35521654 ttaactgcagccggttttttatttcctcggcagttaactgccgagagggcaaaatcgtattttacttgtgtgcctc 35521579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 19054101 - 19054036
Alignment:
Q  2 agttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtatttta 67  Q
    |||||||||||||||||| ||||||||||| | ||||||||| ||||||| |||||  ||||||||    
T  19054101 agttaactgcagccggtttttgaattcctcggcagttaactgtcgagggggcaaaaacgtatttta 19054036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 18975150 - 18975259
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctcggc----tgcaatgtgtcaac 96  Q
    |||||||||||| || |||||| ||||||||   ||||||| ||||||||| |||||  |||||||| |||||| |||| ||    | ||||||||||||    
T  18975150 cagttaactgcaaccagttattaaattcctcgacagttaaccgccgagggggcaaaaacgtattttacttgtgtacctcagctttatacaatgtgtcaac 18975249  T
Q  97 aacaattctc 106  Q
    ||||||||||    
T  18975250 aacaattctc 18975259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 49927543 - 49927652
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctcggc----tgcaatgtgtcaac 96  Q
    |||||||||  |||||||| || ||||| || | |||||||||||||||||||||||  |||||||| | ||||  ||||||    || |||||||||||    
T  49927543 cagttaactatagccggtttttaaattcttcggcagttaactgccgaggggacaaaaacgtattttactcgtgtttctcggccatatgaaatgtgtcaac 49927642  T
Q  97 aacaattctc 106  Q
    ||||||||||    
T  49927643 aacaattctc 49927652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 6562191 - 6562257
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtatttta 67  Q
    ||||||||||||||||| | |  |||||||| | |||||||||||||||||  ||||| ||||||||    
T  6562191 cagttaactgcagccggatttcaaattcctcggcagttaactgccgagggggtaaaatcgtatttta 6562257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 23272892 - 23272826
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtatttta 67  Q
    |||||||||||||| || |||| |||||||| | ||||||||| |||||||| ||||  ||||||||    
T  23272892 cagttaactgcagctggatatttaattcctcggcagttaactggcgaggggaaaaaaacgtatttta 23272826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 23276138 - 23276204
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtatttta 67  Q
    |||||||||| |||||| | || |||||||| | ||||||||||||||||| |||||  ||||||||    
T  23276138 cagttaactgtagccggatttttaattcctcagcagttaactgccgagggggcaaaaacgtatttta 23276204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 27485102 - 27485036
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtatttta 67  Q
    ||||||||||||||||| | || |||||||  | ||||||||||||||||| |||||  ||||||||    
T  27485102 cagttaactgcagccggatttttaattcctaggcagttaactgccgagggggcaaaaacgtatttta 27485036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 30905814 - 30905748
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtatttta 67  Q
    ||||||||||||||||| | |  |||| ||| | |||||||||||||||||| ||||| ||||||||    
T  30905814 cagttaactgcagccggatttcaaatttctcggcagttaactgccgaggggataaaatcgtatttta 30905748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 26633570 - 26633495
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctc 79  Q
    |||||||||||| |||||| |||||||| || | ||||||   |||||||| |||||  |||||||| |||||||||||    
T  26633570 cagttaactgcaaccggtttttgaattcttcggtagttaa---ccgagggggcaaaagcgtattttacttgtgtgcctc 26633495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 51288930 - 51288874
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaa 57  Q
    ||||||||||||||||| | |  |||||||| | ||||||||||||||||| |||||    
T  51288930 cagttaactgcagccggatttctaattcctcggtagttaactgccgagggggcaaaa 51288874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 51337543 - 51337587
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgcc 45  Q
    ||||||||||||||||||| || |||||||| | |||||||||||    
T  51337543 cagttaactgcagccggttttttaattcctcggcagttaactgcc 51337587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 3e-23; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 48314715 - 48314608
Alignment:
Q  2 agttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctcggc----tgcaatgtgtcaaca 97  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||| ||||| ||||||||| |||||| ||||  |    |||||||||||||||    
T  48314715 agttaactgcagccggttattgaattcctcggcagttaactgccgagggg-caaaaatgtattttacttgtgtacctcaaccttatgcaatgtgtcaaca 48314617  T
Q  98 acaattctc 106  Q
    |||||||||    
T  48314616 acaattctc 48314608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 21185662 - 21185553
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctcggc----tgcaatgtgtcaac 96  Q
    ||||||||| |||||||||||||||||| || | ||||||||||||||| | |||||| |||||||| || |||| |||  |    ||||||||||||||    
T  21185662 cagttaactacagccggttattgaattcttcggcagttaactgccgaggaggcaaaatcgtattttacttatgtgtctcatcattatgcaatgtgtcaac 21185563  T
Q  97 aacaattctc 106  Q
    ||||||||||    
T  21185562 aacaattctc 21185553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 46863374 - 46863483
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctcggc----tgcaatgtgtcaac 96  Q
    ||||||||||||||||||| || |||| ||| | ||||||||||||| ||| |||||  |||||||| ||||||| ||| ||    ||||||| ||||||    
T  46863374 cagttaactgcagccggtttttcaatttctcggcagttaactgccgatggggcaaaaacgtattttacttgtgtgtctcagccttatgcaatgcgtcaac 46863473  T
Q  97 aacaattctc 106  Q
    ||||||||||    
T  46863474 aacaattctc 46863483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 9494836 - 9494942
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctcggc----tgcaatgtgtcaac 96  Q
    ||||||||||||||||||| || |||||||| | ||||||||||||||||| || |    ||||||| ||||||||||| ||    || |||||||||||    
T  9494836 cagttaactgcagccggttttttaattcctcggcagttaactgccgagggggcatatacctattttacttgtgtgcctcagccttatgaaatgtgtcaac 9494935  T
Q  97 aacaatt 103  Q
    |||||||    
T  9494936 aacaatt 9494942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 46860553 - 46860476
Alignment:
Q  2 agttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctc 79  Q
    |||||||||||| ||||| || ||||||||   ||||||||||||||||| |||||  |||||||| |||||||||||    
T  46860553 agttaactgcagtcggtttttcaattcctcgacagttaactgccgagggggcaaaagcgtattttacttgtgtgcctc 46860476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 28980203 - 28980312
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctcggc----tgcaatgtgtcaac 96  Q
    |||||||||||| |||| |||||||||| || | || ||||||| |||||| |||||  |||||||| | ||||| ||| ||    ||||||||||||||    
T  28980203 cagttaactgcatccggatattgaattcttcggcagctaactgctgagggggcaaaaacgtattttactcgtgtgtctcagccttatgcaatgtgtcaac 28980302  T
Q  97 aacaattctc 106  Q
    ||||||||||    
T  28980303 aacaattctc 28980312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 34622542 - 34622433
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctcggc----tgcaatgtgtcaac 96  Q
    ||||||||||||| |||||  | |||||||||| ||||||||| | ||||| |||||  |||  ||| ||||||||||| ||    ||||||||||||||    
T  34622542 cagttaactgcagtcggtttcttaattcctctgcagttaactgtcaagggggcaaaaacgtaaattacttgtgtgcctcagccttatgcaatgtgtcaac 34622443  T
Q  97 aacaattctc 106  Q
    ||||||||||    
T  34622442 aacaattctc 34622433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 27453624 - 27453690
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtatttta 67  Q
    ||||||||||||||||| | || |||||||| | ||||||||||||||||| |||| | ||||||||    
T  27453624 cagttaactgcagccggatttttaattcctcggcagttaactgccgagggggcaaagtcgtatttta 27453690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 10705291 - 10705214
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcct 78  Q
    |||||||||||||||| || || |||| ||| | ||||||||||| |||||  |||| ||||||||| ||||||||||    
T  10705291 cagttaactgcagccgattttttaatttctcggcagttaactgccaaggggggaaaaatgtattttacttgtgtgcct 10705214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 37340345 - 37340268
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcct 78  Q
    |||||||||||| |||||| |||||||||||   ||||||||| ||| | |||||||  ||||||||||| |||||||    
T  37340345 cagttaactgcaaccggtttttgaattcctcgacagttaactgtcgaagagacaaaaacgtattttatttatgtgcct 37340268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 36392168 - 36392059
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctcggc----tgcaatgtgtcaac 96  Q
    |||||||| ||| ||| || |||||||||||   ||||||||| ||||||| |||||  |||||||| ||||||||||  ||    || |||||||||||    
T  36392168 cagttaaccgcaaccgatttttgaattcctcaacagttaactgtcgagggggcaaaaacgtattttacttgtgtgcctaagccttatgtaatgtgtcaac 36392069  T
Q  97 aacaattctc 106  Q
    ||||||||||    
T  36392068 aacaattctc 36392059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 21188430 - 21188472
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactg 43  Q
    ||||||||||||||||||| ||||||||||| | |||||||||    
T  21188430 cagttaactgcagccggtttttgaattcctcggcagttaactg 21188472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 30355269 - 30355335
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtatttta 67  Q
    |||||||||||||||| || |||||||| || | | ||||||||||||||| |||||  ||||||||    
T  30355269 cagttaactgcagccgatttttgaattcttcagcaattaactgccgagggggcaaaagcgtatttta 30355335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 47060969 - 47060892
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctc 79  Q
    ||||||||| |||||| || |||||||||||   ||||||||||||||||| |||||  |||||||| |||| ||||||    
T  47060969 cagttaactacagccgatt-ttgaattcctcgacagttaactgccgagggggcaaaaacgtattttacttgtatgcctc 47060892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 36185842 - 36185801
Alignment:
Q  38 taactgccgaggggacaaaattgtattttatttgtgtgcctc 79  Q
    |||||||||||||| |||||| |||||||| |||||||||||    
T  36185842 taactgccgagggggcaaaatcgtattttacttgtgtgcctc 36185801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 5e-22; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 29700332 - 29700438
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctcggc----tgcaatgtgtcaac 96  Q
    ||||||||||||||||||||||||||||||| | ||||||||| ||||| |||||||  |||||||| ||||||||||| ||    || |||||||||||    
T  29700332 cagttaactgcagccggttattgaattcctcagcagttaactgtcgaggagacaaaagcgtattttacttgtgtgcctcagccttatgaaatgtgtcaac 29700431  T
Q  97 aacaatt 103  Q
    |||||||    
T  29700432 aacaatt 29700438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 4768721 - 4768615
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctcggc----tgcaatgtgtcaac 96  Q
    ||||||||||||||| | | ||||||||||| | ||||||||||||||||| ||||||| ||||||| |||||||| || ||    || |||||||||||    
T  4768721 cagttaactgcagccagattttgaattcctcggcagttaactgccgagggggcaaaattatattttacttgtgtgcatcagccttatgaaatgtgtcaac 4768622  T
Q  97 aacaatt 103  Q
    |||||||    
T  4768621 aacaatt 4768615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 49572930 - 49573039
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctcggc----tgcaatgtgtcaac 96  Q
    |||||||||||||||| ||||||||||||||   ||||||||| ||| ||| |||||  |||||||| ||||||||||| ||    ||||||||||||||    
T  49572930 cagttaactgcagccgattattgaattcctcgacagttaactgtcgatggggcaaaaacgtattttacttgtgtgcctcagccttatgcaatgtgtcaac 49573029  T
Q  97 aacaattctc 106  Q
    ||| ||||||    
T  49573030 aacgattctc 49573039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 34154432 - 34154498
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtatttta 67  Q
    ||||||||||||||||||| || |||||||| | ||||||||||||| ||||||||| |||||||||    
T  34154432 cagttaactgcagccggttttttaattcctcggcagttaactgccgatgggacaaaaatgtatttta 34154498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 37959750 - 37959856
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctcggc----tgcaatgtgtcaac 96  Q
    |||||||||||||| ||||||| ||||||||   |||||||||||||||||  ||||  |||||||| | ||||||||| ||    || |||||||||||    
T  37959750 cagttaactgcagctggttattaaattcctcaacagttaactgccgagggggtaaaaacgtattttactcgtgtgcctcagccttatgtaatgtgtcaac 37959849  T
Q  97 aacaatt 103  Q
    |||||||    
T  37959850 aacaatt 37959856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 955835 - 955757
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctc 79  Q
    |||||||||||||||| || ||||||||||| | ||||||||||| | | | |||||  |||||||| |||||||||||    
T  955835 cagttaactgcagccgatttttgaattcctcagcagttaactgccaaagaggcaaaaacgtattttacttgtgtgcctc 955757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 11494586 - 11494521
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtatttta 67  Q
    ||||||||||||||||||| |||||||||||   |||||| ||||||||||||||||  ||||||||    
T  11494586 cagttaactgcagccggtt-ttgaattcctcgacagttaattgccgaggggacaaaaacgtatttta 11494521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 21472514 - 21472580
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtatttta 67  Q
    |||||||||||||||| || ||||||||||| | ||||||||||||||| | |||||  ||||||||    
T  21472514 cagttaactgcagccgatttttgaattcctcggcagttaactgccgaggcggcaaaaacgtatttta 21472580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 958624 - 958701
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctc 79  Q
    |||||||||||| |||||| |||||||| || | ||||||||| |||| ||||||||  |||||||| || ||||||||    
T  958624 cagttaactgcaaccggtttttgaattcatc-gcagttaactgtcgagaggacaaaaacgtattttacttatgtgcctc 958701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 9890037 - 9889971
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtatttta 67  Q
    ||||||||||||||||| | |  |||||||| | |||||||||||||||||  ||||| ||||||||    
T  9890037 cagttaactgcagccggatttcaaattcctcggcagttaactgccgagggggtaaaatcgtatttta 9889971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 18578688 - 18578618
Alignment:
Q  5 taactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtg 75  Q
    |||||||||||| || |||||||||||   ||||||||||| ||| | ||||| ||||||||| |||||||    
T  18578688 taactgcagccgttttttgaattcctcgacagttaactgccaaggaggcaaaaatgtattttacttgtgtg 18578618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 51426577 - 51426503
Alignment:
Q  4 ttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcct 78  Q
    ||||||||||||| || |||||||||||   ||||||||| |||  ||||||||  |||||||| ||||||||||    
T  51426577 ttaactgcagccgatttttgaattcctcgacagttaactgtcgaaaggacaaaaacgtattttacttgtgtgcct 51426503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 21470944 - 21470868
Alignment:
Q  3 gttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctc 79  Q
    ||||||||||| | ||| |||||| ||||   ||||||||||||||  |||||||  |||||||| |||||||||||    
T  21470944 gttaactgcagtcagtttttgaatacctcgacagttaactgccgagaagacaaaaacgtattttacttgtgtgcctc 21470868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 50274803 - 50274747
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaa 57  Q
    ||||||||||||||||| | |  |||||||| | ||||||||||||||||| |||||    
T  50274803 cagttaactgcagccggatttctaattcctcggcagttaactgccgagggggcaaaa 50274747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 2e-21; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 18438677 - 18438568
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctcggc----tgcaatgtgtcaac 96  Q
    |||||||||||||||||||||||||||||||   ||||||||||||| ||| |||||  |||||||| |||||||| || ||    ||||||||||||||    
T  18438677 cagttaactgcagccggttattgaattcctcaacagttaactgccgaaggggcaaaagcgtattttacttgtgtgcatcagccttatgcaatgtgtcaac 18438578  T
Q  97 aacaattctc 106  Q
    ||||||||||    
T  18438577 aacaattctc 18438568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 7168131 - 7168025
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctcggc----tgcaatgtgtcaac 96  Q
    ||||||||||||||||||| |||||||| || | || |||| | ||||||| |||||| |||||||| ||||||||||| ||    || |||||||||||    
T  7168131 cagttaactgcagccggtttttgaattcttcggcagctaacagtcgagggggcaaaatcgtattttacttgtgtgcctcagccttatgaaatgtgtcaac 7168032  T
Q  97 aacaatt 103  Q
    |||||||    
T  7168031 aacaatt 7168025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 18441471 - 18441580
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctcggc----tgcaatgtgtcaac 96  Q
    ||||||||| ||  ||||||||||||| ||| | ||||||||||||||||| |||||  |||||||| ||||||| ||| ||    || |||||||||||    
T  18441471 cagttaactacaatcggttattgaatttctcggcagttaactgccgagggggcaaaaacgtattttacttgtgtgtctcagccttatgaaatgtgtcaac 18441570  T
Q  97 aacaattctc 106  Q
    ||||||||||    
T  18441571 aacaattctc 18441580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 38872960 - 38873035
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgc 76  Q
    ||||||||||||||||||| || |||||||| | ||||||||| ||||||||||||| | | ||||| ||||||||    
T  38872960 cagttaactgcagccggtttttaaattcctcggtagttaactgacgaggggacaaaaatattttttacttgtgtgc 38873035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 41858151 - 41858260
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctcggc----tgcaatgtgtcaac 96  Q
    ||||||||||||||||||| |||||||| ||   ||||||||||||||||| |||||  |||||||| | ||||  ||| ||    || |||||||||||    
T  41858151 cagttaactgcagccggtttttgaattcttcgccagttaactgccgagggggcaaaaacgtattttactcgtgtttctcagccatatgaaatgtgtcaac 41858250  T
Q  97 aacaattctc 106  Q
    ||||||||||    
T  41858251 aacaattctc 41858260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 22577708 - 22577634
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtg 75  Q
    |||||||||||| ||  || ||||||||||| | | |||||||||||||| ||||||  ||||||||||||||||    
T  22577708 cagttaactgcaaccaatttttgaattcctcagcaattaactgccgagggaacaaaaacgtattttatttgtgtg 22577634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 35966802 - 35966845
Alignment:
Q  24 aattcctctggagttaactgccgaggggacaaaattgtatttta 67  Q
    |||||||| | ||||||||||||||||| |||||||||||||||    
T  35966802 aattcctcggcagttaactgccgagggggcaaaattgtatttta 35966845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 21406309 - 21406259
Alignment:
Q  2 agttaactgcagccggttattgaattcctctggagttaactgccgagggga 52  Q
    ||||||||||||||||||  |||||||||| | |||||||||| |||||||    
T  21406309 agttaactgcagccggtttatgaattcctcggcagttaactgcagagggga 21406259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 21800801 - 21800751
Alignment:
Q  2 agttaactgcagccggttattgaattcctctggagttaactgccgagggga 52  Q
    ||||||||||||||||||  |||||||||| | |||||||||| |||||||    
T  21800801 agttaactgcagccggtttatgaattcctcggcagttaactgcagagggga 21800751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 42602503 - 42602437
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtatttta 67  Q
    |||||||||||| |||||| |||||||| || | |||||||||||||  | |||||| |||||||||    
T  42602503 cagttaactgcatccggtttttgaattcttcggcagttaactgccgatagaacaaaaatgtatttta 42602437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 18205829 - 18205781
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgagg 49  Q
    ||||||||||||||||||| |||||||| || | ||||||| |||||||    
T  18205829 cagttaactgcagccggtttttgaattcttcggcagttaaccgccgagg 18205781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 45454449 - 45454373
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcc 77  Q
    |||||||||||| |||| | |  |||||||| | ||||||||||||||| | |||||| |||||||| | |||||||    
T  45454449 cagttaactgcatccggatttcaaattcctcggcagttaactgccgaggaggcaaaatcgtattttactagtgtgcc 45454373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 13404662 - 13404770
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctcggc----tgcaatgtgtcaac 96  Q
    |||||||||||||| ||||||||||||||||   |||||||| |||||||| ||||   |||||||| ||||||||||||||    |||||||||| |||    
T  13404662 cagttaactgcagcaggttattgaattcctcgacagttaactaccgagggggcaaacgcgtattttacttgtgtgcctcggccttatgcaatgtgttaac 13404761  T
Q  97 aacaattct 105  Q
    |||||||||    
T  13404762 aacaattct 13404770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 12783991 - 12784065
Alignment:
Q  5 taactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctc 79  Q
    |||||||||||||||||||||||| || | ||||||||||||| ||| |||||  |||||||| |||||||||||    
T  12783991 taactgcagccggttattgaattcatcggcagttaactgccgatggggcaaaagcgtattttacttgtgtgcctc 12784065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 35021293 - 35021359
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtatttta 67  Q
    ||||||||||||||||||| |||||||| || | | ||||||||||||||| ||||| |||||||||    
T  35021293 cagttaactgcagccggtttttgaattcttccgcatttaactgccgagggggcaaaagtgtatttta 35021359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 13479769 - 13479663
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctcggc----tgcaatgtgtcaac 96  Q
    |||||||||||||| |||| ||||||||| |   |||||||| |||||||| |||||  |||||||| ||||||||||| ||    || |||||||||||    
T  13479769 cagttaactgcagctggtttttgaattccccgacagttaactaccgagggggcaaaagcgtattttacttgtgtgcctcagccttatgaaatgtgtcaac 13479670  T
Q  97 aacaatt 103  Q
    |||||||    
T  13479669 aacaatt 13479663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 23958930 - 23958867
Alignment:
Q  4 ttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtatttta 67  Q
    |||||||||||||||| | ||||| ||| | |||||||||||||||||||||||  ||||||||    
T  23958930 ttaactgcagccggttttggaatttctcggcagttaactgccgaggggacaaaaacgtatttta 23958867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 23986011 - 23986085
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtg 75  Q
    |||||||||||| |||||| ||||||| ||| | ||||||||||| ||||| |||||  |||||||| |||||||    
T  23986011 cagttaactgcaaccggtttttgaatttctcggcagttaactgccaagggggcaaaaacgtattttacttgtgtg 23986085  T

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Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 13401529 - 13401473
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaa 57  Q
    |||||||||||||||| || || |||||||| | ||||||||||||||||| |||||    
T  13401529 cagttaactgcagccgattttttaattcctcggcagttaactgccgagggggcaaaa 13401473  T

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Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 25141109 - 25141218
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctcggc----tgcaatgtgtcaac 96  Q
    |||||||||| ||| |||  |||||||||||   |||||||||||||  |||||||| | ||  ||||| ||||||||| ||    ||||||||||||||    
T  25141109 cagttaactgtagctggtatttgaattcctcgacagttaactgccgaatggacaaaaatataaattattcgtgtgcctcagccttatgcaatgtgtcaac 25141208  T
Q  97 aacaattctc 106  Q
    ||||||||||    
T  25141209 aacaattctc 25141218  T

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Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 31768793 - 31768740
Alignment:
Q  4 ttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaa 57  Q
    |||||||||||||| | || |||||||| | ||||||||||||||||| |||||    
T  31768793 ttaactgcagccggatttttaattcctcggcagttaactgccgagggggcaaaa 31768740  T

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Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 7361234 - 7361178
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaa 57  Q
    ||||||||||||||||||| || || ||||| | |||||| |||||| |||||||||    
T  7361234 cagttaactgcagccggtttttaaaatcctcagcagttaattgccgacgggacaaaa 7361178  T

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Target: scaffold0388 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 11740 - 11813
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgt 74  Q
    ||||||||||||||||||| |||||||| || | ||||||||||||| ||| ||||| ||||||||| ||||||    
T  11740 cagttaactgcagccggtttttgaattcttcagcagttaactgccgaaggggcaaaagtgtattttacttgtgt 11813  T

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Target: scaffold0618 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 3928 - 3851
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtattttatttgtgtgcctc 79  Q
    |||||||||||||||| || |||||||||||   |||||||||||||||||||||||   ||||||| |||||||||||    
T  3928 cagttaactgcagccgatttttgaattcctcgacagttaactgccgaggggacaaaa-aatattttacttgtgtgcctc 3851  T

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Target: scaffold0341 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 17381 - 17447
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtatttta 67  Q
    ||||||||||||||||| | |  |||||||| | |||||||||||||||||  ||||| ||||||||    
T  17381 cagttaactgcagccggatttcaaattcctcggcagttaactgccgagggggtaaaatcgtatttta 17447  T

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Target: scaffold0012 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 232591 - 232525
Alignment:
Q  1 cagttaactgcagccggttattgaattcctctggagttaactgccgaggggacaaaattgtatttta 67  Q
    ||||||||||||| ||| | || ||||||||   |||||||||||||||||| ||||| ||||||||    
T  232591 cagttaactgcagtcggatttttaattcctcgacagttaactgccgaggggataaaatcgtatttta 232525  T

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