View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7415_low_47 (Length: 248)
Name: NF7415_low_47
Description: NF7415
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7415_low_47 |
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Alignment Details
Target: chr4 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 56278362 - 56278132
Alignment:
| Q |
1 |
tagaaaggaacaagcatgagcaatcttgtgattcttcatgtcatagatgtataactctgcagaaaccttaatcagcaatttcccatctttgaagccaaga |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
56278362 |
tagaaaggaacaagcatgagcaatcttgtgattcttcatgtcatagatgtataactctgcagaaaccttaatcagcaatttcccatctttgaagccaaga |
56278263 |
T |
|
| Q |
101 |
ggattcatccaaggatttgtatcatcactctccaacactctattccttagattcaaaaagaggcgtggatattctgcttcaaaatcctccaaaagtttgc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
56278262 |
ggattcatccaaggatttgtatcatcactctccaacactctattccttaaattcaaaaagaggcgtggatattctgcttcaaaatcctccaaaagtttgc |
56278163 |
T |
|
| Q |
201 |
aatgcttaagcagccatttgaagtcaaaata |
231 |
Q |
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|||||||||||| |||||||||||||||||| |
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| T |
56278162 |
aatgcttaagcacccatttgaagtcaaaata |
56278132 |
T |
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