View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7415_low_52 (Length: 238)
Name: NF7415_low_52
Description: NF7415
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7415_low_52 |
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Alignment Details
Target: chr7 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 12 - 223
Target Start/End: Original strand, 48079771 - 48079982
Alignment:
| Q |
12 |
ttctatatgaataatagggaaacttagtaatagttatacataaaatgtgcacattagttacaccgcaannnnnnnatatgtatgttaaatatgcaatgaa |
111 |
Q |
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| T |
48079771 |
ttctatatgaataatagggaaacttagtaatagttatacataaaatgtgcacattagttacaccgcaatttttttatatgtatgttaaatatgcaatgaa |
48079870 |
T |
|
| Q |
112 |
aattttcttcttttgaaaaaagttacaaccgtaaacctaaaaaggacaaacaatgatatactcatgtctataggataggataagagaacattcattttta |
211 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48079871 |
aattttcttcttttgaaaaaagttacaaccctaaacctaaaaaggacaaacaatgatatactcatgtctataggataggataagagaacattcattttta |
48079970 |
T |
|
| Q |
212 |
tgatatagttta |
223 |
Q |
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|||||||||||| |
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| T |
48079971 |
tgatatagttta |
48079982 |
T |
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