View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7417_high_15 (Length: 311)

Name: NF7417_high_15
Description: NF7417
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7417_high_15
NF7417_high_15
[»] chr6 (1 HSPs)
chr6 (16-311)||(1965075-1965370)


Alignment Details
Target: chr6 (Bit Score: 288; Significance: 1e-161; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 16 - 311
Target Start/End: Original strand, 1965075 - 1965370
Alignment:
Q  16 atagtcctaaaaattaaaaccacaaatcaatgaactaattaaaacaaaacaagaatattattctcatgtcctaacaaatatataaattgctatttccctt 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1965075 atagtcctaaaaattaaaaccacaaatcaatgaactaattaaaacaaaacaagaatattattctcatgtcctaacaaatatataaattgctatttccctt 1965174  T
Q  116 taactataacatataaaaactaaaatcatcttttcatatttgatgattactctaatccaaaactcataatcctctcttgatcaccttccctttgaagaat 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  1965175 taactataacatataaaaactaaaatcatcttttcatatttgatgattactctaatccaaaactcataatcctctcttgatcaccttccctttgaagtat 1965274  T
Q  216 agccaataacaattcactccaaacatcaatagcaccaggcaaacaccaatgagtacaatcattataacctttcatccatttatttccccaatgttg 311  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1965275 agccaataacaactcactccaaacatcaatagcaccaggcaaacaccaatgagtacaatcattataacctttcatccatttatttccccaatgttg 1965370  T

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