View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7417_high_8 (Length: 402)
Name: NF7417_high_8
Description: NF7417
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7417_high_8 |
 |  |
|
| [»] scaffold0277 (2 HSPs) |
 |  |  |
|
| [»] scaffold0419 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr4 (Bit Score: 170; Significance: 4e-91; HSPs: 11)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 163 - 392
Target Start/End: Original strand, 18681777 - 18682006
Alignment:
| Q |
163 |
gcttaagctccacatagatccattcattttttaaaagtgctttgtccatttcagactcgaaattgatcccgtgaaatattttacagcgttcaatattttc |
262 |
Q |
| |
|
|||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || ||||||||| |
|
|
| T |
18681777 |
gcttaaactccacatagatccgttcattttttaaaagtgctttgtccatttcagactcaaaattgatcccgtgaaatattttacagcattgaatattttc |
18681876 |
T |
 |
| Q |
263 |
ttccaaattcatatcaaacaaatatgtatgtcccgaagaaagctcccatttaaattcgagttctggaaatgtacatttataaccatcgacaaacaaatta |
362 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||| |||||||| |||||| |||||| |
|
|
| T |
18681877 |
ttccaaattcatatcaaacaaatatgtatgtcccgaagaaggcagacatttaaattggagttctggaaatgtacattcataaccattgacaaaaaaatta |
18681976 |
T |
 |
| Q |
363 |
aatcctaaagaatatttaacatccggaaga |
392 |
Q |
| |
|
|||||||||| ||| ||||||||||||||| |
|
|
| T |
18681977 |
aatcctaaagtatacttaacatccggaaga |
18682006 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 163 - 392
Target Start/End: Original strand, 18726009 - 18726238
Alignment:
| Q |
163 |
gcttaagctccacatagatccattcattttttaaaagtgctttgtccatttcagactcgaaattgatcccgtgaaatattttacagcgttcaatattttc |
262 |
Q |
| |
|
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||| |
|
|
| T |
18726009 |
gcttaaactccacatagatccgttcattttttaaaagtgctttgtccatttcagacttgaaattgatcccgtgaaatattttacagcattgaatattttc |
18726108 |
T |
 |
| Q |
263 |
ttccaaattcatatcaaacaaatatgtatgtcccgaagaaagctcccatttaaattcgagttctggaaatgtacatttataaccatcgacaaacaaatta |
362 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||| |||||||| |||||| |||||| |
|
|
| T |
18726109 |
ttccaaattcatatcaaacaaatatgtatgtcccgaagaaggaagacatttaaattggagttctggaaatgtacattcataaccattgacaaaaaaatta |
18726208 |
T |
 |
| Q |
363 |
aatcctaaagaatatttaacatccggaaga |
392 |
Q |
| |
|
|||||||||| ||| ||||||||||||||| |
|
|
| T |
18726209 |
aatcctaaagtatacttaacatccggaaga |
18726238 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 163 - 402
Target Start/End: Original strand, 18686450 - 18686689
Alignment:
| Q |
163 |
gcttaagctccacatagatccattcattttttaaaagtgctttgtccatttcagactcgaaattgatcccgtgaaatattttacagcgttcaatattttc |
262 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| |
|
|
| T |
18686450 |
gcttaaactccacatagatccattcattttttaaaagtgctttgtccatttcagactcgaaattgatcccgtgaaatattttacagccttgaatattttc |
18686549 |
T |
 |
| Q |
263 |
ttccaaattcatatcaaacaaatatgtatgtcccgaagaaagctcccatttaaattcgagttctggaaatgtacatttataaccatcgacaaacaaatta |
362 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||| || || | || |||||| || ||||||||||||||||| |||||||| ||||||||||||| |
|
|
| T |
18686550 |
ttccaaattcatatcaaacaaaaatgtatgtcccgaaaaatgcggcgatctaaatttgaattctggaaatgtacattcataaccattgacaaacaaatta |
18686649 |
T |
 |
| Q |
363 |
aatcctaaagaatatttaacatccggaagaataataatag |
402 |
Q |
| |
|
|||| ||| ||||| |||||||||||||||||| |||| |
|
|
| T |
18686650 |
aatctgaaattatattgaacatccggaagaataattatag |
18686689 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 163 - 401
Target Start/End: Original strand, 18696256 - 18696494
Alignment:
| Q |
163 |
gcttaagctccacatagatccattcattttttaaaagtgctttgtccatttcagactcgaaattgatcccgtgaaatattttacagcgttcaatattttc |
262 |
Q |
| |
|
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| |||||| |||||| |
|
|
| T |
18696256 |
gcttaaactccacattgatccattcattttttaaaagtgctttgtccatttcagattccaaattgatcccgtgaaatattttacagagttcaacattttc |
18696355 |
T |
 |
| Q |
263 |
ttccaaattcatatcaaacaaatatgtatgtcccgaagaaagctcccatttaaattcgagttctggaaatgtacatttataaccatcgacaaacaaatta |
362 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||| | || ||| || ||||| | ||||||||||||||| | |||||||| ||||||||||||| |
|
|
| T |
18696356 |
ttccaaattcatatcaaacaaatatgtatgtctcgaacactgcagccaattcaattcaaattctggaaatgtacagtcataaccattgacaaacaaatta |
18696455 |
T |
 |
| Q |
363 |
aatcctaaagaatatttaacatccggaagaataataata |
401 |
Q |
| |
|
||| | ||| |||| |||||||||||||||||||||| |
|
|
| T |
18696456 |
aattcgaaactatatccaacatccggaagaataataata |
18696494 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 170 - 402
Target Start/End: Original strand, 18676417 - 18676646
Alignment:
| Q |
170 |
ctccacatagatccattcattttttaaaagtgctttgtccatttcagactcgaaattgatcccgtgaaatattttacagcgttcaatattttcttccaaa |
269 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| || ||| |||||||||||||||| |
|
|
| T |
18676417 |
ctccacatagatccattcattttttaaaagtgctttgtccattgcagactcgaaattgatcccgtaaaatattttcaagtgttgaatattttcttccaaa |
18676516 |
T |
 |
| Q |
270 |
ttcatatcaaacaaatatgtatgtcccgaagaaagctcccatttaaattcgagttctggaaatgtacatttataaccatcgacaaacaaattaaatccta |
369 |
Q |
| |
|
||||||||||||||||||| |||||||||||||| |||||||||||| | |||||| |||||| || |||||||| ||||||||||||||||| | |
|
|
| T |
18676517 |
ttcatatcaaacaaatatgcatgtcccgaagaaaatccccatttaaatttaaaatctggatatgtacgttcataaccattgacaaacaaattaaatctga |
18676616 |
T |
 |
| Q |
370 |
aagaatatttaacatccggaagaataataatag |
402 |
Q |
| |
|
||| || ||||||||||||||||||||||| |
|
|
| T |
18676617 |
---aatgttgaacatccggaagaataataatag |
18676646 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 163 - 297
Target Start/End: Original strand, 18720916 - 18721050
Alignment:
| Q |
163 |
gcttaagctccacatagatccattcattttttaaaagtgctttgtccatttcagactcgaaattgatcccgtgaaatattttacagcgttcaatattttc |
262 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||| |
|
|
| T |
18720916 |
gcttaaactccacatagatccattcattttttaaatgtgctttgtccatttcagactccaaattgatcccgtgaaatattttacagagttcaacattttc |
18721015 |
T |
 |
| Q |
263 |
ttccaaattcatatcaaacaaatatgtatgtcccg |
297 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||| |
|
|
| T |
18721016 |
ttccaaattcatttcaaacaaatatgtatgtcccg |
18721050 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 233 - 402
Target Start/End: Original strand, 18652392 - 18652564
Alignment:
| Q |
233 |
gtgaaatattttacagcgttcaatattttcttccaaattcatatcaaacaaatatgtatgtcccgaagaaagctcccatttaaattcgagttctggaaat |
332 |
Q |
| |
|
||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| || || | | ||||||||||| ||| ||||| | |
|
|
| T |
18652392 |
gtgaactatattacagagttcaatattttcttccaaattcatatcaaacaaatatgtatgtcccaaaaaatacggcaatttaaattcgtgttttggaact |
18652491 |
T |
 |
| Q |
333 |
gtacatttataaccatcgacaaacaaattaaatcctaaaga---atatttaacatccggaagaataataatag |
402 |
Q |
| |
|
||||||| |||||||| |||||| |||||||||| ||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
18652492 |
gtacattcataaccattgacaaaaaaattaaatctgaaagaaatatattgaacatccggaagaataataatag |
18652564 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 237 - 401
Target Start/End: Original strand, 18728420 - 18728584
Alignment:
| Q |
237 |
aatattttacagcgttcaatattttcttccaaattcatatcaaacaaatatgtatgtcccgaagaaagctcccatttaaattcgagttctggaaatgtac |
336 |
Q |
| |
|
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| || | | | ||||||||| || | ||| ||||| |
|
|
| T |
18728420 |
aatattttatagtgttcaatattttcttccaaattcatatcaaacaaatatgtatgtcccgaaaaatacggcagtctaaattcgaatttttgaactgtac |
18728519 |
T |
 |
| Q |
337 |
atttataaccatcgacaaacaaattaaatcctaaagaatatttaacatccggaagaataataata |
401 |
Q |
| |
|
||| || ||| | |||||||||||||||||||||| |||||| ||||| |||||||||||||||| |
|
|
| T |
18728520 |
attcatgacctttgacaaacaaattaaatcctaaataatattcaacattcggaagaataataata |
18728584 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 42 - 157
Target Start/End: Original strand, 18650084 - 18650196
Alignment:
| Q |
42 |
ataattaagatagataataataaaatggagctaaaatacatggttaacaattttgataacctttactcnnnnnnnnnnnnggaataaaaacattatttat |
141 |
Q |
| |
|
|||||| ||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||| |||||||||| ||||||||| |
|
|
| T |
18650084 |
ataatttagatagataataataaaatggagctcaaaaacagggttaacaattttgataacctttactc---ttgttttttggaataaaaaaattatttat |
18650180 |
T |
 |
| Q |
142 |
taaagtgacactaacg |
157 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
18650181 |
taaagtgacactaacg |
18650196 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 170 - 208
Target Start/End: Original strand, 18728380 - 18728418
Alignment:
| Q |
170 |
ctccacatagatccattcattttttaaaagtgctttgtc |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18728380 |
ctccacatagatccattcattttttaaaagtgctttgtc |
18728418 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 203
Target Start/End: Original strand, 18652350 - 18652389
Alignment:
| Q |
164 |
cttaagctccacatagatccattcattttttaaaagtgct |
203 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
18652350 |
cttaaactccacatagatccattcattttttaaaagtgct |
18652389 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 47; Significance: 1e-17; HSPs: 13)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 26626492 - 26626438
Alignment:
| Q |
166 |
taagctccacatagatccattcattttttaaaagtgctttgtccatttcagactc |
220 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
26626492 |
taagctccacatggatccattcattttttaaaagtgttttgtccatttcagactc |
26626438 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 26732469 - 26732415
Alignment:
| Q |
166 |
taagctccacatagatccattcattttttaaaagtgctttgtccatttcagactc |
220 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
26732469 |
taagctccacatggatccattcattttttaaaagtgttttgtccatttcagactc |
26732415 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 165 - 218
Target Start/End: Complemental strand, 28789715 - 28789662
Alignment:
| Q |
165 |
ttaagctccacatagatccattcattttttaaaagtgctttgtccatttcagac |
218 |
Q |
| |
|
||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
28789715 |
ttaagctccacatggatccattcagtttttaaaagtgctttgtccatttcagac |
28789662 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 28795739 - 28795687
Alignment:
| Q |
165 |
ttaagctccacatagatccattcattttttaaaagtgctttgtccatttcaga |
217 |
Q |
| |
|
||||||||||||| |||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
28795739 |
ttaagctccacatggatccactcattttttaaaagtgctttgtccatttcaga |
28795687 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 27657547 - 27657601
Alignment:
| Q |
164 |
cttaagctccacatagatccattcattttttaaaagtgctttgtccatttcagac |
218 |
Q |
| |
|
|||||||||||||| ||||||||||||||| |||||| ||||||||||||||||| |
|
|
| T |
27657547 |
cttaagctccacatggatccattcatttttcaaaagttctttgtccatttcagac |
27657601 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 25077366 - 25077321
Alignment:
| Q |
173 |
cacatagatccattcattttttaaaagtgctttgtccatttcagac |
218 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25077366 |
cacatggatccattcattttttaaaagtgctttgtccatttcagac |
25077321 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 167 - 284
Target Start/End: Complemental strand, 31287934 - 31287817
Alignment:
| Q |
167 |
aagctccacatagatccattcattttttaaaagtgctttgtccatttcagactcgaaattgatcccgtgaaatattttacagcgttcaatattttcttcc |
266 |
Q |
| |
|
|||||||||| |||||||||||||| ||||||||||||||||||||||||||| | || ||||| | || | || | |||||| | ||| ||||||| |
|
|
| T |
31287934 |
aagctccacacggatccattcattttccaaaagtgctttgtccatttcagactcgtacttaatcccataaattcttctcaagcgtttattatgttcttcc |
31287835 |
T |
 |
| Q |
267 |
aaattcatatcaaacaaa |
284 |
Q |
| |
|
|| |||| |||||||||| |
|
|
| T |
31287834 |
aatttcagatcaaacaaa |
31287817 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 26659322 - 26659268
Alignment:
| Q |
164 |
cttaagctccacatagatccattcattttttaaaagtgctttgtccatttcagac |
218 |
Q |
| |
|
||||||||| | || |||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
26659322 |
cttaagctcgatatggatccattcattttttaaaagtgcattgtccatttcagac |
26659268 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 26765293 - 26765239
Alignment:
| Q |
164 |
cttaagctccacatagatccattcattttttaaaagtgctttgtccatttcagac |
218 |
Q |
| |
|
||||||||| | || |||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
26765293 |
cttaagctcgatatggatccattcattttttaaaagtgcattgtccatttcagac |
26765239 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 26805872 - 26805824
Alignment:
| Q |
164 |
cttaagctccacatagatccattcattttttaaaagtgctttgtccatt |
212 |
Q |
| |
|
|||||||||||||| ||||||||||||||| ||||| ||||||||||| |
|
|
| T |
26805872 |
cttaagctccacatggatccattcatttttcgaaagtactttgtccatt |
26805824 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 212
Target Start/End: Original strand, 27589957 - 27589998
Alignment:
| Q |
171 |
tccacatagatccattcattttttaaaagtgctttgtccatt |
212 |
Q |
| |
|
||||||| ||||||||||||||| |||||| ||||||||||| |
|
|
| T |
27589957 |
tccacatggatccattcatttttcaaaagtcctttgtccatt |
27589998 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 205
Target Start/End: Complemental strand, 27682292 - 27682251
Alignment:
| Q |
164 |
cttaagctccacatagatccattcattttttaaaagtgcttt |
205 |
Q |
| |
|
||||| |||||||||||||||||||||||| |||||| |||| |
|
|
| T |
27682292 |
cttaaactccacatagatccattcatttttcaaaagtccttt |
27682251 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 27674374 - 27674422
Alignment:
| Q |
164 |
cttaagctccacatagatccattcattttttaaaagtgctttgtccatt |
212 |
Q |
| |
|
||||| |||||||| ||||||||||||||| |||||| |||| |||||| |
|
|
| T |
27674374 |
cttaaactccacatggatccattcatttttcaaaagtcctttctccatt |
27674422 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0277
Description:
Target: scaffold0277; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 10484 - 10537
Alignment:
| Q |
165 |
ttaagctccacatagatccattcattttttaaaagtgctttgtccatttcagac |
218 |
Q |
| |
|
||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
10484 |
ttaagctccacatggatccattcagtttttaaaagtgctttgtccatttcagac |
10537 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 1518 - 1571
Alignment:
| Q |
165 |
ttaagctccacatagatccattcattttttaaaagtgctttgtccatttcagac |
218 |
Q |
| |
|
||||| ||||||| ||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
1518 |
ttaagttccacatggatccattcattttttaaaagtgctttttccatttcagac |
1571 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0419 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0419
Description:
Target: scaffold0419; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 218
Target Start/End: Complemental strand, 10865 - 10812
Alignment:
| Q |
165 |
ttaagctccacatagatccattcattttttaaaagtgctttgtccatttcagac |
218 |
Q |
| |
|
||||||||||||| ||||||||||||| |||||| ||||| ||||||||||||| |
|
|
| T |
10865 |
ttaagctccacatggatccattcatttcttaaaattgcttcgtccatttcagac |
10812 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 204
Target Start/End: Complemental strand, 26139374 - 26139334
Alignment:
| Q |
164 |
cttaagctccacatagatccattcattttttaaaagtgctt |
204 |
Q |
| |
|
||||||||| |||| |||||||||||||||||||||||||| |
|
|
| T |
26139374 |
cttaagctctacatggatccattcattttttaaaagtgctt |
26139334 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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