View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7418_low_7 (Length: 300)
Name: NF7418_low_7
Description: NF7418
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7418_low_7 |
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Alignment Details
Target: chr1 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 6 - 284
Target Start/End: Original strand, 51015215 - 51015493
Alignment:
| Q |
6 |
atatcaaatacaagaatttagtaaagattgaattgagaatgagaagtactacgtaccaagaacatctccacggctaaagttgtatctctctgcccaagta |
105 |
Q |
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| T |
51015215 |
atatcaaatacaagaatttagtaaagattgaattgagaatgagaagtactacgtaccaagaacatctccacggctaaagttgtatctctctgcccaagta |
51015314 |
T |
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| Q |
106 |
gcataatttgtttggctactccattcatcttgatcaccaacagcataaacactagccatgacacagttcaagagaaaactacatagcaaaataagaattg |
205 |
Q |
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| T |
51015315 |
gcataatttgtttggctactccattcatcttgatcaccaacagcataaacactagccatgacacagttcaagagaaaactacatagcaaaataagaattg |
51015414 |
T |
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| Q |
206 |
agagtatgaaggtacagttgttgaagaaatttgtgatcaccatttctttgaaaaagtaagaaagaagatgtgatgaaac |
284 |
Q |
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| T |
51015415 |
aaagtatgaaggtacagttgttgaagaaatttgtgatcaccatttctttgaaaaagtaagaaagaagatgtgatgaaac |
51015493 |
T |
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