View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7420_low_6 (Length: 258)
Name: NF7420_low_6
Description: NF7420
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7420_low_6 |
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Alignment Details
Target: chr2 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 16 - 250
Target Start/End: Complemental strand, 43414020 - 43413786
Alignment:
| Q |
16 |
aaaacaaggtcaaaatgaagttccctaaagaagagacccatgtttaagggaatataaggcttaataagtgagacttagagatttgggatttatttaacag |
115 |
Q |
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| T |
43414020 |
aaaacaaggtcaagatgaagttccctaaagaagagacccatgtttaagggaatataaggcttaataagtgagacttagagatttgggatttatttaacag |
43413921 |
T |
|
| Q |
116 |
ctcttttagtggtgtggtgcgtataacaccctccaaaattattttaattataagatatattttttgaatttggatcgtgtgtaaaaattatctaagttga |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43413920 |
ctcttttagtggtgtggtgcgtataacaccctccaaaattattttaattataagatatattttttgaatttggatcgtgtgtaaaaattatctaagttga |
43413821 |
T |
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| Q |
216 |
actaaatatatttacgtttctatctcttaacacga |
250 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
43413820 |
actaaatatatttacgtttctatctcttaacacga |
43413786 |
T |
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