View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7424_high_8 (Length: 266)
Name: NF7424_high_8
Description: NF7424
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7424_high_8 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 28 - 266
Target Start/End: Original strand, 3299828 - 3300066
Alignment:
| Q |
28 |
gaaacttaataataatctctctcctagaatcactaaaaaagaaggtgagagggaatgattttagttaagaaaaaaccggagaagatatatcatatcatag |
127 |
Q |
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| T |
3299828 |
gaaacttaataataatctctctcctagaatcactaaaaaagaaggtgagagggaatgattttagttaagaaaaaaccggagaagatatatcatatcatag |
3299927 |
T |
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| Q |
128 |
cataagcatagcataggtttaggtatcattattattatactataaaattcgttatacggtcacaacaacattctgaattcaattctgattctgatagtga |
227 |
Q |
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| T |
3299928 |
cataagcatagcataggtttaggtatcattattattatactataaaattcgttatacggtcacaacaacattctgaattcaattctgattctgatagtga |
3300027 |
T |
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| Q |
228 |
tacaacgacctttgtggctctctgcccactactctctgc |
266 |
Q |
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| T |
3300028 |
tacaacgacctttgtggctctctgcccactgctctctgc |
3300066 |
T |
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