View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7424_low_14 (Length: 253)
Name: NF7424_low_14
Description: NF7424
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7424_low_14 |
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Alignment Details
Target: chr2 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 22 - 235
Target Start/End: Original strand, 3300169 - 3300382
Alignment:
| Q |
22 |
atagagaattttatcatcccaacgtgtgacaccactctcctatagatataaacacacaaaaccattttcttaaaaccttctttgaaagacaaaaaatatt |
121 |
Q |
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| T |
3300169 |
atagagaattttatcatcccaacgtgtgacaccactctcctatagatataaacacacaaaaccattttcttaaaaccttctttgaaagacaaaaaatatt |
3300268 |
T |
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| Q |
122 |
acattctgccacttgctttctacttcagtgtctcttctttctctaaacccagtatcaaaagtttttacctttccaaccattttcatcatcacatcccatc |
221 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3300269 |
acattctgccacttgctttctacttcagtgtctcttctttctctaaacccagtatcaaaagtttttacctttccaaccattttcatcatcacatcccatc |
3300368 |
T |
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| Q |
222 |
ccctacacgatata |
235 |
Q |
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|||||||||||||| |
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| T |
3300369 |
ccctacacgatata |
3300382 |
T |
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