View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7425_low_15 (Length: 307)

Name: NF7425_low_15
Description: NF7425
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7425_low_15
NF7425_low_15
[»] chr8 (15 HSPs)
chr8 (7-261)||(24341904-24342158)
chr8 (8-211)||(19792218-19792422)
chr8 (8-261)||(26853918-26854168)
chr8 (48-239)||(21319289-21319478)
chr8 (24-224)||(24221553-24221756)
chr8 (24-212)||(22904495-22904684)
chr8 (8-211)||(14162137-14162340)
chr8 (45-96)||(14878316-14878367)
chr8 (46-96)||(23221534-23221584)
chr8 (46-96)||(25396947-25396997)
chr8 (46-96)||(26012992-26013042)
chr8 (41-96)||(6279739-6279794)
chr8 (46-96)||(23193984-23194034)
chr8 (13-79)||(17515800-17515869)
chr8 (46-96)||(18162012-18162062)
[»] chr5 (19 HSPs)
chr5 (8-239)||(16676949-16677177)
chr5 (19-253)||(20738208-20738444)
chr5 (8-260)||(2953522-2953774)
chr5 (7-211)||(12410424-12410627)
chr5 (81-205)||(20103986-20104110)
chr5 (8-213)||(24166153-24166361)
chr5 (8-213)||(23029565-23029775)
chr5 (46-96)||(22942370-22942420)
chr5 (8-248)||(22170646-22170882)
chr5 (111-165)||(23110779-23110831)
chr5 (46-96)||(20915977-20916027)
chr5 (46-94)||(24214757-24214805)
chr5 (46-94)||(24220380-24220428)
chr5 (46-97)||(24165262-24165313)
chr5 (137-211)||(31758239-31758314)
chr5 (46-96)||(15059387-15059437)
chr5 (46-96)||(17408751-17408801)
chr5 (46-96)||(20169486-20169536)
chr5 (46-96)||(23343570-23343620)
[»] chr6 (52 HSPs)
chr6 (8-262)||(12660455-12660707)
chr6 (7-211)||(25031206-25031408)
chr6 (8-242)||(12658027-12658253)
chr6 (61-247)||(18396545-18396729)
chr6 (40-211)||(28734158-28734330)
chr6 (58-248)||(26138532-26138720)
chr6 (58-248)||(26017778-26017966)
chr6 (58-248)||(26157151-26157339)
chr6 (58-248)||(25507462-25507651)
chr6 (8-205)||(29253886-29254084)
chr6 (68-261)||(17739478-17739670)
chr6 (8-239)||(23517329-23517561)
chr6 (81-239)||(23574730-23574886)
chr6 (81-253)||(5399091-5399262)
chr6 (40-211)||(3923548-3923714)
chr6 (40-205)||(23523965-23524130)
chr6 (109-239)||(13217402-13217530)
chr6 (41-178)||(20464304-20464441)
chr6 (9-155)||(20222856-20223005)
chr6 (9-155)||(22116840-22116989)
chr6 (46-162)||(31965576-31965692)
chr6 (8-213)||(29682484-29682694)
chr6 (137-211)||(18993091-18993166)
chr6 (133-209)||(25923499-25923576)
chr6 (139-212)||(26821774-26821847)
chr6 (34-98)||(26821873-26821937)
chr6 (137-211)||(18627324-18627399)
chr6 (137-211)||(25339363-25339438)
chr6 (46-96)||(17743527-17743577)
chr6 (46-96)||(18233839-18233889)
chr6 (46-96)||(25949337-25949387)
chr6 (8-96)||(20221190-20221281)
chr6 (8-96)||(22115174-22115265)
chr6 (46-212)||(23348179-23348344)
chr6 (139-209)||(19612856-19612926)
chr6 (54-96)||(25963937-25963979)
chr6 (54-96)||(25968584-25968626)
chr6 (139-248)||(15471204-15471311)
chr6 (139-247)||(15172103-15172209)
chr6 (13-96)||(24218729-24218815)
chr6 (8-66)||(13217334-13217394)
chr6 (24-98)||(19612737-19612812)
chr6 (40-129)||(9414324-9414414)
chr6 (46-96)||(18195554-18195604)
chr6 (13-78)||(18448802-18448870)
chr6 (46-96)||(18844475-18844525)
chr6 (46-96)||(25402488-25402538)
chr6 (46-96)||(30245243-30245293)
chr6 (46-79)||(18184418-18184451)
chr6 (13-96)||(210131-210217)
chr6 (137-211)||(4740878-4740954)
chr6 (139-207)||(17794083-17794151)
[»] chr7 (38 HSPs)
chr7 (8-242)||(4460749-4460984)
chr7 (8-261)||(11483851-11484105)
chr7 (46-248)||(9264411-9264611)
chr7 (40-207)||(4256632-4256800)
chr7 (8-248)||(4983137-4983378)
chr7 (81-205)||(1462468-1462592)
chr7 (19-205)||(19515357-19515545)
chr7 (81-253)||(6257573-6257744)
chr7 (8-203)||(679486-679685)
chr7 (8-211)||(17206384-17206588)
chr7 (10-213)||(38877296-38877502)
chr7 (111-165)||(3194557-3194611)
chr7 (46-248)||(4541020-4541220)
chr7 (46-96)||(8787308-8787358)
chr7 (8-96)||(33609727-33609816)
chr7 (139-248)||(17911452-17911560)
chr7 (46-96)||(41722715-41722765)
chr7 (46-98)||(3376524-3376576)
chr7 (137-211)||(5825951-5826026)
chr7 (46-96)||(17946737-17946787)
chr7 (100-145)||(21005640-21005685)
chr7 (13-96)||(16076819-16076905)
chr7 (137-211)||(16897382-16897457)
chr7 (46-96)||(648813-648863)
chr7 (46-96)||(782803-782853)
chr7 (46-96)||(8780435-8780485)
chr7 (46-96)||(12561949-12561999)
chr7 (46-96)||(12567644-12567694)
chr7 (46-96)||(14941756-14941806)
chr7 (46-96)||(15369349-15369399)
chr7 (46-96)||(15707267-15707317)
chr7 (46-96)||(33612296-33612346)
chr7 (46-96)||(35964248-35964298)
chr7 (46-96)||(48340620-48340670)
chr7 (46-96)||(48355612-48355662)
chr7 (34-98)||(2325859-2325924)
chr7 (147-211)||(13434781-13434846)
chr7 (108-155)||(4317077-4317125)
[»] chr4 (19 HSPs)
chr4 (8-238)||(11922436-11922668)
chr4 (8-261)||(38651994-38652246)
chr4 (58-248)||(12345989-12346179)
chr4 (41-249)||(5513662-5513869)
chr4 (46-213)||(23793624-23793791)
chr4 (46-96)||(11888998-11889048)
chr4 (46-96)||(11902643-11902693)
chr4 (139-248)||(33331118-33331226)
chr4 (137-211)||(3772299-3772374)
chr4 (46-96)||(3355270-3355320)
chr4 (46-96)||(31593906-31593956)
chr4 (13-96)||(6518379-6518465)
chr4 (46-98)||(20059183-20059235)
chr4 (8-73)||(17168876-17168944)
chr4 (8-73)||(17174448-17174516)
chr4 (46-79)||(24125248-24125281)
chr4 (46-79)||(43701593-43701626)
chr4 (48-96)||(16951909-16951957)
chr4 (13-96)||(21102222-21102308)
[»] chr1 (23 HSPs)
chr1 (41-248)||(16384973-16385180)
chr1 (7-211)||(16148438-16148640)
chr1 (46-248)||(8648725-8648925)
chr1 (46-248)||(39286647-39286849)
chr1 (73-248)||(30819122-30819296)
chr1 (57-248)||(20860786-20860976)
chr1 (8-121)||(25405069-25405184)
chr1 (139-248)||(23298751-23298860)
chr1 (130-203)||(43998345-43998419)
chr1 (8-211)||(13799440-13799643)
chr1 (46-94)||(17986584-17986632)
chr1 (13-96)||(21784214-21784300)
chr1 (114-165)||(15347075-15347126)
chr1 (135-178)||(20493431-20493474)
chr1 (46-96)||(2386234-2386284)
chr1 (46-96)||(20412277-20412327)
chr1 (54-96)||(20899430-20899472)
chr1 (42-96)||(28206385-28206439)
chr1 (46-94)||(17716766-17716814)
chr1 (46-96)||(21792376-21792426)
chr1 (46-96)||(41802283-41802333)
chr1 (46-96)||(44538253-44538303)
chr1 (46-79)||(30819079-30819112)
[»] chr2 (25 HSPs)
chr2 (46-248)||(15583669-15583871)
chr2 (8-262)||(25337141-25337396)
chr2 (45-238)||(20851993-20852184)
chr2 (87-186)||(24366362-24366461)
chr2 (8-241)||(19124319-19124552)
chr2 (89-186)||(24369087-24369184)
chr2 (8-238)||(19013020-19013244)
chr2 (139-249)||(23257130-23257239)
chr2 (82-248)||(25858695-25858864)
chr2 (46-98)||(23340591-23340643)
chr2 (46-96)||(20282064-20282114)
chr2 (46-96)||(5499800-5499850)
chr2 (46-96)||(16134218-16134268)
chr2 (41-186)||(24371461-24371607)
chr2 (40-239)||(24321666-24321864)
chr2 (117-211)||(20281949-20282043)
chr2 (117-211)||(21344582-21344676)
chr2 (137-211)||(41653725-41653800)
chr2 (46-96)||(19929397-19929447)
chr2 (46-96)||(24820626-24820676)
chr2 (46-79)||(539226-539259)
chr2 (46-79)||(25481412-25481445)
chr2 (46-79)||(25489018-25489051)
chr2 (46-79)||(42767399-42767432)
chr2 (13-96)||(24824975-24825061)
[»] chr3 (22 HSPs)
chr3 (8-239)||(17023106-17023336)
chr3 (8-248)||(13069633-13069871)
chr3 (24-248)||(11869838-11870063)
chr3 (110-248)||(20225350-20225487)
chr3 (21-212)||(8685846-8686039)
chr3 (41-241)||(41545775-41545973)
chr3 (8-211)||(42244536-42244740)
chr3 (137-211)||(11827530-11827605)
chr3 (113-241)||(16703661-16703787)
chr3 (81-161)||(22038813-22038893)
chr3 (8-208)||(8531791-8531994)
chr3 (46-96)||(2721944-2721994)
chr3 (46-98)||(6236871-6236923)
chr3 (137-211)||(7908418-7908493)
chr3 (137-211)||(13418282-13418357)
chr3 (46-211)||(17041630-17041795)
chr3 (46-96)||(14494843-14494893)
chr3 (46-96)||(14660810-14660860)
chr3 (46-96)||(14976327-14976377)
chr3 (46-96)||(17050755-17050805)
chr3 (54-96)||(34053638-34053680)
chr3 (46-96)||(43842094-43842144)
[»] scaffold0012 (1 HSPs)
scaffold0012 (42-253)||(49747-49957)
[»] scaffold0168 (1 HSPs)
scaffold0168 (46-205)||(8883-9041)
[»] scaffold0213 (1 HSPs)
scaffold0213 (46-240)||(21518-21711)
[»] scaffold0713 (1 HSPs)
scaffold0713 (58-248)||(6738-6928)
[»] scaffold0855 (1 HSPs)
scaffold0855 (10-202)||(3371-3566)
[»] scaffold0847 (1 HSPs)
scaffold0847 (10-202)||(3536-3731)
[»] scaffold0264 (1 HSPs)
scaffold0264 (81-205)||(22463-22587)
[»] scaffold0088 (1 HSPs)
scaffold0088 (25-154)||(38447-38578)
[»] scaffold0014 (1 HSPs)
scaffold0014 (8-213)||(168088-168295)
[»] scaffold1559 (1 HSPs)
scaffold1559 (10-211)||(1299-1502)
[»] scaffold0011 (2 HSPs)
scaffold0011 (7-211)||(172633-172838)
scaffold0011 (46-101)||(163942-163997)
[»] scaffold0031 (3 HSPs)
scaffold0031 (46-96)||(23277-23327)
scaffold0031 (46-96)||(199-249)
scaffold0031 (46-100)||(100378-100432)
[»] scaffold1323 (1 HSPs)
scaffold1323 (13-96)||(1897-1983)
[»] scaffold1208 (1 HSPs)
scaffold1208 (46-96)||(1972-2022)
[»] scaffold0447 (2 HSPs)
scaffold0447 (46-96)||(6431-6481)
scaffold0447 (46-96)||(11045-11095)
[»] scaffold0383 (1 HSPs)
scaffold0383 (46-96)||(9040-9090)
[»] scaffold0138 (2 HSPs)
scaffold0138 (46-100)||(27378-27432)
scaffold0138 (46-100)||(39374-39428)
[»] scaffold0123 (1 HSPs)
scaffold0123 (46-96)||(2521-2571)
[»] scaffold0362 (1 HSPs)
scaffold0362 (46-91)||(9240-9285)
[»] scaffold0197 (1 HSPs)
scaffold0197 (8-79)||(8853-8925)
[»] scaffold0058 (1 HSPs)
scaffold0058 (43-79)||(61874-61910)
[»] scaffold0371 (1 HSPs)
scaffold0371 (46-96)||(9117-9167)
[»] scaffold0211 (1 HSPs)
scaffold0211 (46-96)||(17672-17722)
[»] scaffold0142 (2 HSPs)
scaffold0142 (46-96)||(21726-21776)
scaffold0142 (46-96)||(26873-26923)
[»] scaffold0064 (1 HSPs)
scaffold0064 (46-96)||(48803-48853)
[»] scaffold0018 (1 HSPs)
scaffold0018 (46-96)||(18792-18842)
[»] scaffold0916 (1 HSPs)
scaffold0916 (48-211)||(3409-3573)
[»] scaffold0471 (1 HSPs)
scaffold0471 (46-79)||(9836-9869)
[»] scaffold0251 (1 HSPs)
scaffold0251 (46-79)||(18971-19004)
[»] scaffold0037 (1 HSPs)
scaffold0037 (46-79)||(48424-48457)
[»] scaffold0006 (1 HSPs)
scaffold0006 (46-79)||(33984-34017)
[»] scaffold0001 (1 HSPs)
scaffold0001 (46-79)||(425054-425087)


Alignment Details
Target: chr8 (Bit Score: 195; Significance: 1e-106; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 7 - 261
Target Start/End: Complemental strand, 24342158 - 24341904
Alignment:
Q  7 gagaagaacataaaataaaatagcaagaaaataaagaatttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaaac 106  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||| |    
T  24342158 gagaataacataaaataaaatagcaagaaaataaagaacttttattaaaagaaacaattgtcacttattatttctaagaacaaaagatgattatacaagc 24342059  T
Q  107 ttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaataa 206  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  24342058 ttgatgactgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaagacaccataggctttaggtcagaaataa 24341959  T
Q  207 actaaaacagacagcttgccgtagaagcaaaagcagtaaaagagcaatatggggc 261  Q
    ||||||||||||| |||| | ||||||||||||| | ||||| ||||||||||||    
T  24341958 actaaaacagacatcttgtcatagaagcaaaagccgcaaaagggcaatatggggc 24341904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 8 - 211
Target Start/End: Original strand, 19792218 - 19792422
Alignment:
Q  8 agaagaacataaaataaaatagcaagaaaataaaga---atttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaa 104  Q
    |||||| ||||||||||||||  |||||||||||||   ||||||||| |||||||||||||||||||||||||| ||||| | ||||||||||||||||    
T  19792218 agaagaccataaaataaaata--aagaaaataaagatgaatttttatttaaagaaacaattgtcacttattatttccaagaactaaagatgattatacaa 19792315  T
Q  105 acttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaat 204  Q
     ||||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||  | | ||||||||||| ||||    
T  19792316 gcttgatgtctgctctatttatagtctaacaatgacttaagccctaagaaataaatcactaaagtgttgcacaagaaatgacaagctttaggtcaaaaat 19792415  T
Q  205 aaactaa 211  Q
    |||||||    
T  19792416 aaactaa 19792422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 8 - 261
Target Start/End: Complemental strand, 26854168 - 26853918
Alignment:
Q  8 agaagaacataaaataaaatagcaagaaaataaagaatttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaaact 107  Q
    ||||||||||||||||| | || ||  ||| |||||| ||||||||||  ||||||||||||||  | | || ||||| |||||||||||| ||||||||    
T  26854168 agaagaacataaaataaca-agaaaataaaaaaagaacttttattaaagaaaacaattgtcactattgaattccaagaacaaaagatgattttacaaact 26854070  T
Q  108 tgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaataaa 207  Q
     |||||||||||||| ||||| ||||||||||||| ||||| ||||| ||||||||||||||||||||||| ||| ||| |||| ||||||||||||  |    
T  26854069 agatggctgctctatctatagtctaacattgacttgagccccaagaattaaatcactaaagtgttgcacaagaaaacatgggctctaggtcagaaat--a 26853972  T
Q  208 ctaaaacagacagcttgccgtagaagcaaaagcagtaaaagagcaatatggggc 261  Q
    |||||| |  ||||||| || |||||||||||| | |||||  |||||||||||    
T  26853971 ctaaaatacgcagcttgtcgaagaagcaaaagctgcaaaaggacaatatggggc 26853918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 48 - 239
Target Start/End: Complemental strand, 21319478 - 21319289
Alignment:
Q  48 ttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaaacttgatggctgctctatttatagcctaacattgacttaagcc 147  Q
    ||||||| | ||||||||||||||  | |  ||||||| ||||||||| || || ||||| ||||||||||||||| |||| ||||||||||||| ||||    
T  21319478 ttattaagaaaaacaattgtcactgttgaaattcaagaacaaaagatgtttttataaactagatggctgctctattaatagtctaacattgacttcagcc 21319379  T
Q  148 ctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaataaactaaaacagacagcttgccgtagaagcaaaag 239  Q
    | ||||| ||||||||||||||||||||||| ||||||| | || || || ||||||  ||||||| || ||||||| || |||||||||||    
T  21319378 ccaagaattaaatcactaaagtgttgcacaagaaaccatggactctaagtaagaaat--actaaaatagccagcttgtcgaagaagcaaaag 21319289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 224
Target Start/End: Original strand, 24221553 - 24221756
Alignment:
Q  24 aaatagcaagaaaataaa---gaatttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaaacttgatggctgctct 120  Q
    ||||| ||||||||||||   ||| ||||||| ||||||| ||||||||||||  |||| ||||| ||||| |||||| || |   ||| | | ||||||    
T  24221553 aaataacaagaaaataaatatgaacttttattcaaagaaataattgtcacttagaatttccaagaacaaaaaatgattgtatatgtttgctagttgctct 24221652  T
Q  121 atttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaataaactaaaacagacag 220  Q
    |||||||| |||| | | ||||||||||||||||||  |||| || | |||| ||||| ||||||| |||||||||||||||||||||||||| || |||    
T  24221653 atttatagtctaaaactaacttaagccctaagaaatccatcaatagaatgttccacaagaaaccatgggctttaggtcagaaataaactaaaaaaggcag 24221752  T
Q  221 cttg 224  Q
    ||||    
T  24221753 cttg 24221756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 24 - 212
Target Start/End: Complemental strand, 22904684 - 22904495
Alignment:
Q  24 aaatagcaagaaaataaaga---atttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaaacttgatggctgctct 120  Q
    ||||| ||||||||||||||   | ||||||| ||||||||||||||||||||| |||| ||||| ||||||||||||  | |   ||| | |||||| |    
T  22904684 aaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-t 22904586  T
Q  121 atttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaataaactaaa 212  Q
    ||||||||||||  | | |||| ||||| || ||||| |||| || | |||| ||||| ||| ||| |||| ||||||||||||| ||||||    
T  22904585 atttatagcctataact-actttagccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaatagactaaa 22904495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 211
Target Start/End: Original strand, 14162137 - 14162340
Alignment:
Q  8 agaagaacataaaataaaatagcaagaaaataaaga---atttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgatta-taca 103  Q
    |||||||||||||||||||||  |||||| ||||||   | ||||||| ||| ||||||||||||||||||||||   ||| ||||||||||||  |       
T  14162137 agaagaacataaaataaaata--aagaaa-taaagatgaacttttattcaaataaacaattgtcacttattatttcagagaacaaaagatgatttgttgt 14162233  T
Q  104 aacttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggc-tttaggtcagaa 202  Q
     ||| | | ||| ||||||||||||  || || ||||||||| ||||||||||| ||||||| | |||| ||||| ||||||| ||| |||||||||| |    
T  14162234 gact-gctagctactctatttatagttta-caatgacttaagacctaagaaatatatcactagaatgttccacaagaaaccatgggcttttaggtcagga 14162331  T
Q  203 ataaactaa 211  Q
    |||||||||    
T  14162332 ataaactaa 14162340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 96
Target Start/End: Original strand, 14878316 - 14878367
Alignment:
Q  45 tttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    |||||||| ||||||||||||||||||||||||||||||||  |||||||||    
T  14878316 tttttattcaaagaaacaattgtcacttattattttcaagaagaaaagatga 14878367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 23221534 - 23221584
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| ||||||||||||||||||||||||||||||||  |||||||||    
T  23221534 ttttattcaaagaaacaattgtcacttattattttcaagaagaaaagatga 23221584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 25396997 - 25396947
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| |||||||||||||||||||||||||| ||||| ||||||||||    
T  25396997 ttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatga 25396947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 26013042 - 26012992
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| |||||||||||||||||||||||||| ||||| ||||||||||    
T  26013042 ttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatga 26012992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 6279794 - 6279739
Alignment:
Q  41 agaatttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    |||| ||||||| ||||||||||||||||||||||||||   ||||||||||||||    
T  6279794 agaacttttattcaaagaaacaattgtcacttattatttcagagagcaaaagatga 6279739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 23193984 - 23194034
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| |||||||||||||||| ||||||||| ||||| ||||||||||    
T  23193984 ttttattcaaagaaacaattgtcagttattatttccaagaacaaaagatga 23194034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 17515800 - 17515869
Alignment:
Q  13 aacataaaataaaatagcaagaaaataaag---aatttttattaaaagaaacaattgtcacttattattt 79  Q
    ||||||||| |||||| | ||||| |||||   || ||||||| ||||||||||||||||||||||||||    
T  17515800 aacataaaagaaaataacgagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattattt 17515869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 18162062 - 18162012
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| ||||||||||||||||||||||||||   ||| ||||||||||    
T  18162062 ttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 18162012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 139; Significance: 9e-73; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 8 - 239
Target Start/End: Complemental strand, 16677177 - 16676949
Alignment:
Q  8 agaagaacataaaataaaatagcaagaaaataaagaatttttattaaaagaaacaattgtcacttattattttca-agagcaaaagatgattatacaaac 106  Q
    |||||||||||||||||||||   | ||||  ||||| ||||||| |||||||||||||||||| |||| ||||| |||  ||||||||||||||||| |    
T  16677177 agaagaacataaaataaaata---ataaaaagaagaacttttattcaaagaaacaattgtcact-attaatttcagagaagaaaagatgattatacaagc 16677082  T
Q  107 ttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaataa 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||| |||||||||||||||||||    
T  16677081 ttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactgaagtgttgcacaagaaatcatgggctttaggtcagaaataa 16676982  T
Q  207 actaaaacagacagcttgccgtagaagcaaaag 239  Q
    ||||||||||||| |||| || |||||||||||    
T  16676981 actaaaacagacaacttgtcgaagaagcaaaag 16676949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 19 - 253
Target Start/End: Complemental strand, 20738444 - 20738208
Alignment:
Q  19 aaataaaatagcaagaaaataaag----aatttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaaacttgatggc 114  Q
    |||||||||| |||||||||||||    || ||||||||| | | ||||||| ||||  | | || ||||| |||||||||||| |||||||| ||||||    
T  20738444 aaataaaataacaagaaaataaaggaagaacttttattaagaaagacaattgccactattgaattccaagaacaaaagatgattttacaaactagatggc 20738345  T
Q  115 tgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaataaactaaaac 214  Q
    |||| ||||||||| ||||||||||||| ||||| ||||| ||||||||||||||||||||||| |||||||  ||| ||||||||||||  |||||||     
T  20738344 tgctttatttatagtctaacattgacttgagccccaagaattaaatcactaaagtgttgcacaagaaaccatgtgctctaggtcagaaat--actaaaat 20738247  T
Q  215 agacagcttgccgtagaagcaaaagcagtaaaagagcaa 253  Q
    || ||||||| || |||||||||||||| ||||| ||||    
T  20738246 aggcagcttgtcgaagaagcaaaagcagcaaaagggcaa 20738208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 8 - 260
Target Start/End: Original strand, 2953522 - 2953774
Alignment:
Q  8 agaagaacataaaataaaatagcaagaaaataaagaatt---tttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaa 104  Q
    ||||||||||||| ||||||| ||||||||||||| |     |||||||| | | ||||||||||||  | | || ||||| |||||||||||| | |||    
T  2953522 agaagaacataaa-taaaataacaagaaaataaaggaagaactttattaagaaagacaattgtcactattgaattccaagaacaaaagatgatttttcaa 2953620  T
Q  105 acttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaat 204  Q
    ||| ||||||| |||||||||||| ||||||||||||| ||||| || || ||||||| ||||||||||||||| |||| || |||| ||||||||||||    
T  2953621 actagatggctactctatttatagtctaacattgacttgagccccaataattaaatcattaaagtgttgcacaagaaacgatgggctctaggtcagaaat 2953720  T
Q  205 aaactaaaacagacagcttgccgtagaagcaaaagcagtaaaagagcaatatgggg 260  Q
      ||||||| || ||||||| || |||||||||||||| ||||| |||| ||||||    
T  2953721 --actaaaataggcagcttgtcggagaagcaaaagcagcaaaagggcaaaatgggg 2953774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 7 - 211
Target Start/End: Complemental strand, 12410627 - 12410424
Alignment:
Q  7 gagaagaacataaaataaaatagcaagaaaataaagaatttttattaaaagaaacaattgtcacttatt-attttcaagagcaaaagatgattatacaaa 105  Q
    |||||||||||||||||||||||||||||| |||| || ||||||||||  |||||||||||| ||||| | || ||||| |||||||||| |    |      
T  12410627 gagaagaacataaaataaaatagcaagaaagtaaataacttttattaaagaaaacaattgtca-ttattgaattccaagaacaaaagatgaattgttatg 12410529  T
Q  106 cttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaata 205  Q
     ||| | ||| ||||||||||||  || || ||||||||||||||||||||||||||||| | |||| ||||| ||||||| ||||||||||||||||||    
T  12410528 attgctagctactctatttatagttta-caatgacttaagccctaagaaataaatcactagaatgttccacaagaaaccatgggctttaggtcagaaata 12410430  T
Q  206 aactaa 211  Q
    ||||||    
T  12410429 aactaa 12410424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 81 - 205
Target Start/End: Original strand, 20103986 - 20104110
Alignment:
Q  81 caagagcaaaagatgattatacaaacttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaata 180  Q
    ||||| ||||| ||| || |||| ||| |||||||||||||||||||| || |||||||||| ||||| ||||| ||||||||||||||||||||||| |    
T  20103986 caagaacaaaatatggttttacatactagatggctgctctatttatagtcttacattgacttgagccccaagaattaaatcactaaagtgttgcacaaga 20104085  T
Q  181 aaccataggctttaggtcagaaata 205  Q
    ||||||||||| |||||||||||||    
T  20104086 aaccataggctctaggtcagaaata 20104110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 8 - 213
Target Start/End: Complemental strand, 24166361 - 24166153
Alignment:
Q  8 agaagaacataaaataaaatagcaagaaaataaaga---atttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaa 104  Q
    |||||||||| |||  ||||| |||| |||||||||   | ||||||| ||||||||||||||||||||| |||| ||||| ||||||||||  ||| |     
T  24166361 agaagaacatgaaagtaaataacaagcaaataaagatgaacttttattcaaagaaacaattgtcacttatcatttccaagaacaaaagatgaaaatatat 24166262  T
Q  105 acttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaat 204  Q
      ||  | ||||||||||||||||| ||| | | |||||||||| |||||||| |||| || | |||||||||| ||||| ||||||||| |||| ||||    
T  24166261 gtttcctagctgctctatttatagcataaaactaacttaagccccaagaaatacatcaatagaatgttgcacaagaaaccgtaggctttatgtcaaaaat 24166162  T
Q  205 aaactaaaa 213  Q
    |||||||||    
T  24166161 aaactaaaa 24166153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 213
Target Start/End: Original strand, 23029565 - 23029775
Alignment:
Q  8 agaagaacataaaataaaatagcaagaaaataaagaat---ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaa 104  Q
    ||||||||||| ||  ||||| |||||||||||||||    ||||||| |||||||||||  |||||||| |||| ||||| |||||||||| || | |     
T  23029565 agaagaacatagaagtaaataacaagaaaataaagaagaacttttattcaaagaaacaatcttcacttataatttccaagaacaaaagatgaatagatat 23029664  T
Q  105 acttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaa-ccataggc-tttaggtcagaa 202  Q
       || | ||||||||||||||||||||| | | || ||||||| |||||||| |||| || | |||| ||||| ||| |||||||| ||||||||| ||    
T  23029665 gtctgctagctgctctatttatagcctaaaactaacataagccccaagaaatacatcaatagaatgttccacaagaaacccataggcttttaggtcaaaa 23029764  T
Q  203 ataaactaaaa 213  Q
     || |||||||    
T  23029765 ttacactaaaa 23029775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 22942420 - 22942370
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| |||||||||||||||||||||||||| ||||| ||||||||||    
T  22942420 ttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatga 22942370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 248
Target Start/End: Complemental strand, 22170882 - 22170646
Alignment:
Q  8 agaagaacataaaataaaatagcaagaaaataaagaatttttattaaaagaaacaattgtcacttattattttca-agagcaaaagatgattatacaaac 106  Q
    |||||||||||||||||||||   | ||||  ||||| ||||||| |||||||||||||||||| |||| ||||| | | |||||||||| |  | |       
T  22170882 agaagaacataaaataaaata---ataaaaagaagaacttttattcaaagaaacaattgtcact-attaatttcagataacaaaagatgaatgaatatga 22170787  T
Q  107 ttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaataa 206  Q
    ||| | |||||| ||||||||| |||  | | |||||||||  |||||||| || | || | |||| ||||| |||| || ||||||||||||||||||     
T  22170786 ttgctagctgctttatttatagtctacaact-acttaagcctcaagaaatacattaatagaatgtttcacaagaaactatgggctttaggtcagaaatag 22170688  T
Q  207 actaaaacagacagcttgccgtagaagcaaaagcagtaaaag 248  Q
    | | |||||| |||||||  | ||||||||||| || |||||    
T  22170687 aattaaacaggcagcttgtggaagaagcaaaagtagcaaaag 22170646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 23110831 - 23110779
Alignment:
Q  111 tggctgctctatttatagcctaacattgacttaagccctaagaaataaatcacta 165  Q
    ||||| ||||||||||||||||||  | |||||||||||||||||||||||||||    
T  23110831 tggcttctctatttatagcctaac--taacttaagccctaagaaataaatcacta 23110779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 20915977 - 20916027
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| ||||||| |||||||||||||||||| ||||| ||||||||||    
T  20915977 ttttattcaaagaaataattgtcacttattatttccaagaacaaaagatga 20916027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 24214805 - 24214757
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagat 94  Q
    ||||||| |||||||||||||||||||||||||| | ||| ||||||||    
T  24214805 ttttattcaaagaaacaattgtcacttattatttccgagaacaaaagat 24214757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 24220428 - 24220380
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagat 94  Q
    ||||||| |||||||||||||||||||||||||| | ||| ||||||||    
T  24220428 ttttattcaaagaaacaattgtcacttattatttccgagaacaaaagat 24220380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 97
Target Start/End: Complemental strand, 24165313 - 24165262
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgat 97  Q
    ||||||| ||||||||||||||||||||||||||   ||| |||||||||||    
T  24165313 ttttattcaaagaaacaattgtcacttattatttaagagaacaaaagatgat 24165262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 137 - 211
Target Start/End: Original strand, 31758239 - 31758314
Alignment:
Q  137 tgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctt-taggtcagaaataaactaa 211  Q
    ||||||||||||||||||||| |  |||| | |||| ||||| |||||| |||||| |||||||||| ||||||||    
T  31758239 tgacttaagccctaagaaatataaaactagaatgtttcacaagaaaccacaggcttgtaggtcagaagtaaactaa 31758314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 15059437 - 15059387
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| ||||||||||||||||||||||||||   ||| ||||||||||    
T  15059437 ttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 15059387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 17408751 - 17408801
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||||||  ||||||||| ||||||||||||| |||| ||||||||||    
T  17408751 ttttattaaagaaaacaattggcacttattattttgaagaacaaaagatga 17408801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 20169486 - 20169536
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| |||||||||||||||||||||| ||| ||| | ||||||||||    
T  20169486 ttttattcaaagaaacaattgtcacttattctttccaataacaaaagatga 20169536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 23343570 - 23343620
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| ||||||||||||||||||||||||||   ||| ||||||||||    
T  23343570 ttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 23343620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 134; Significance: 9e-70; HSPs: 52)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 8 - 262
Target Start/End: Original strand, 12660455 - 12660707
Alignment:
Q  8 agaagaacataaaataaaatagcaagaaaataaaga---atttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaa 104  Q
    |||||||| ||||||||||||  |||||||||||||   | ||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  12660455 agaagaacttaaaataaaata--aagaaaataaagatgaacttttattcaaagaaacaattgtcacttattattttcaagaaaaaaagatgattatacaa 12660552  T
Q  105 acttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaat 204  Q
     || ||||| |||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||| |||| ||||||||||||    
T  12660553 gctagatggttgctctatttatagtctaacattgacttgagccctaagaaat-aatcactaaagtgttgcacaagaaaccatgggctctaggtcagaaat 12660651  T
Q  205 aaactaaaacagacagcttgccgtagaagcaaaagcagtaaaagagcaatatggggca 262  Q
      ||||||| || ||||||| || |||||||||||||| |||||  ||||||||||||    
T  12660652 --actaaaataggcagcttgtcgaagaagcaaaagcagcaaaaggacaatatggggca 12660707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 7 - 211
Target Start/End: Original strand, 25031206 - 25031408
Alignment:
Q  7 gagaagaacataaaataaaatagcaagaaaataaagaatttttattaaaagaaa-caattgtcacttattattttca-agagcaaaagatgattatacaa 104  Q
    ||||||||||||||||||||||   | ||||  ||||| ||||||| ||||||| ||||||||||| |||| ||||| ||| ||||||||||||||||||    
T  25031206 gagaagaacataaaataaaata---ataaaaagaagaacttttattcaaagaaaacaattgtcact-attaatttcagagaacaaaagatgattatacaa 25031301  T
Q  105 acttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaat 204  Q
     |||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||| ||||    
T  25031302 gcttgatggttgctctatttatagtccaacattgacttaagccctaagaaataaatcactaaagtgttgcacaagaaaccacgggctttaggtcaaaaat 25031401  T
Q  205 aaactaa 211  Q
    |||||||    
T  25031402 aaactaa 25031408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 8 - 242
Target Start/End: Original strand, 12658027 - 12658253
Alignment:
Q  8 agaagaacataaaataaaatagcaagaaaataaaga---atttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaa 104  Q
    |||||||||||||||||||||  |||||||||||||   | ||||||| ||||||||||||||| |||||||||| ||| | |||       ||||| ||    
T  12658027 agaagaacataaaataaaata--aagaaaataaagatgaacttttattcaaagaaacaattgtcgcttattatttccaacaacaa-------ttataaaa 12658117  T
Q  105 acttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaat 204  Q
     || ||||||| |||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||    
T  12658118 gctagatggctactctatttatggtctaacattgacttgagccctaagaaataaatcactaaagtgttgcacaagaaaccatgggctctaggtcagaaat 12658217  T
Q  205 aaactaaaacagacagcttgccgtagaagcaaaagcag 242  Q
      ||||||| || ||||||| || ||||||||||||||    
T  12658218 --actaaaataggcagcttgtcgaagaagcaaaagcag 12658253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 61 - 247
Target Start/End: Original strand, 18396545 - 18396729
Alignment:
Q  61 caattgtcacttattattttcaagagcaaaagatgattatacaaacttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaat 160  Q
    |||||||||||  | | || ||||| |||||||||||||||||| || |||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  18396545 caattgtcactattgaattccaagaacaaaagatgattatacaagctagatggctgctctatttatagtctaacattgacttgagccctaagaaataaat 18396644  T
Q  161 cactaaagtgttgcacaataaaccataggctttaggtcagaaataaactaaaacagacagcttgccgtagaagcaaaagcagtaaaa 247  Q
    |||||||||||||||||| ||||||| |||| ||||||||||||  ||||||| || |||| || || ||| |||||||||| ||||    
T  18396645 cactaaagtgttgcacaagaaaccatgggctctaggtcagaaat--actaaaataggcagcctgtcgaagaggcaaaagcagcaaaa 18396729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 40 - 211
Target Start/End: Original strand, 28734158 - 28734330
Alignment:
Q  40 aagaatttttattaaaagaaa-caattgtcacttattattttcaagagcaaaagatgattatacaaacttgatggctgctctatttatagcctaacattg 138  Q
    ||||| ||||||| ||||||| |||||||||||  | | || | ||| |||||||||||||||||| ||| ||||||||||||||||||| |||||| ||    
T  28734158 aagaaattttattcaaagaaagcaattgtcactattaaattccgagaacaaaagatgattatacaagctttatggctgctctatttatagtctaacaatg 28734257  T
Q  139 acttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaataaactaa 211  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||   ||||||||||| |||||||||||    
T  28734258 acttaagccctaagaaataaatcactaaagtgttgcacaagaaaccacgagctttaggtcaaaaataaactaa 28734330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 58 - 248
Target Start/End: Complemental strand, 26138720 - 26138532
Alignment:
Q  58 aaacaattgtcacttattattttcaagagcaaaagatgattatacaaacttgatggctgctctatttatagcctaacattgacttaagccctaagaaata 157  Q
    |||||||||||||||||||||| ||||| ||||||||| || |||||||| |  | ||| ||||||||||| ||||||||||||| ||||||||||| ||    
T  26138720 aaacaattgtcacttattattt-caagaacaaaagatggttttacaaactaggggactgatctatttatagtctaacattgacttgagccctaagaatta 26138622  T
Q  158 aatcactaaagtgttgcacaataaaccataggctttaggtcagaaataaactaaaacagacagc-ttgccgtagaagcaaaagcagtaaaag 248  Q
    ||||||||||||||||||||| |||||||||||| |||||| |||||  ||||||| || |||| ||| || |||||||||||||| |||||    
T  26138621 aatcactaaagtgttgcacaagaaaccataggctctaggtctgaaat--actaaaataggcagctttgtcgaagaagcaaaagcagcaaaag 26138532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 58 - 248
Target Start/End: Complemental strand, 26017966 - 26017778
Alignment:
Q  58 aaacaattgtcacttattattttcaagagcaaaagatgattatacaaacttgatggctgctctatttatagcctaacattgacttaagccctaagaaata 157  Q
    |||||||||||||||||||||| ||||| ||||||||| || |||||||| |||| ||| ||||||||||| ||||||||||||| ||||| ||||| ||    
T  26017966 aaacaattgtcacttattattt-caagaacaaaagatggttttacaaactagatgactgatctatttatagtctaacattgacttgagccccaagaatta 26017868  T
Q  158 aatcactaaagtgttgcacaataaaccataggctttaggtcagaaataaactaaaacagacagc-ttgccgtagaagcaaaagcagtaaaag 248  Q
    ||||||||||||||||||| | |||||||||||| |||||| |||||  ||||||| || |||| ||| || |||| ||||||||| |||||    
T  26017867 aatcactaaagtgttgcactagaaaccataggctctaggtctgaaat--actaaaataggcagctttgtcgaagaaacaaaagcagcaaaag 26017778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 58 - 248
Target Start/End: Complemental strand, 26157339 - 26157151
Alignment:
Q  58 aaacaattgtcacttattattttcaagagcaaaagatgattatacaaacttgatggctgctctatttatagcctaacattgacttaagccctaagaaata 157  Q
    |||||||||||||||||||||| ||||| ||||||||| || |||||||| |||| ||| ||||||||||| ||||||||||||| ||||| ||||| ||    
T  26157339 aaacaattgtcacttattattt-caagaacaaaagatggttttacaaactagatgactgatctatttatagtctaacattgacttgagccccaagaatta 26157241  T
Q  158 aatcactaaagtgttgcacaataaaccataggctttaggtcagaaataaactaaaacagacagc-ttgccgtagaagcaaaagcagtaaaag 248  Q
    ||||||||||||||||||| | |||||||||||| |||||| |||||  ||||||| || |||| ||| || |||| ||||||||| |||||    
T  26157240 aatcactaaagtgttgcactagaaaccataggctctaggtctgaaat--actaaaataggcagctttgtcgaagaaacaaaagcagcaaaag 26157151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 58 - 248
Target Start/End: Complemental strand, 25507651 - 25507462
Alignment:
Q  58 aaacaattgtcacttattattttcaagagcaaaagatgattatacaaacttgatggctgctctatttatagcctaacattgacttaagccctaagaaata 157  Q
    |||||||||||||||||||||| ||||| ||||||| | || |||||||| |||| ||||||||||||||| ||||||||||||| ||||| | ||| ||    
T  25507651 aaacaattgtcacttattatttccaagaacaaaagaaggttttacaaactagatgactgctctatttatagtctaacattgacttgagccccatgaatta 25507552  T
Q  158 aatcactaaagtgttgcacaataaaccataggctttaggtcagaaataaactaaaacagacagc-ttgccgtagaagcaaaagcagtaaaag 248  Q
    ||||||||||||||||||||| || |||| || | ||||||||||||  ||||||| || |||| ||| || ||||||||| |||| |||||    
T  25507551 aatcactaaagtgttgcacaagaagccatgggttctaggtcagaaat--actaaaataggcagctttgtcgaagaagcaaatgcagcaaaag 25507462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 8 - 205
Target Start/End: Complemental strand, 29254084 - 29253886
Alignment:
Q  8 agaagaacataaaataaaatagcaagaaaataaag----aatttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattataca 103  Q
    ||||||||||||| ||||||| |||||||||||||    || ||||||||| | ||||||||||||||  | | ||  |||| ||||||||| || ||||    
T  29254084 agaagaacataaa-taaaataacaagaaaataaaggaagaacttttattaaga-aaacaattgtcactattgaattctaagaacaaaagatgtttttaca 29253987  T
Q  104 aacttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaa 203  Q
    |||| ||||||||||||||||||||  |||||||||||| ||||| ||| ||||||||||||||||||||||||| ||||||| |||| |||||||||||    
T  29253986 aactcgatggctgctctatttatagtttaacattgacttgagccccaag-aataaatcactaaagtgttgcacaagaaaccatgggctctaggtcagaaa 29253888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 68 - 261
Target Start/End: Complemental strand, 17739670 - 17739478
Alignment:
Q  68 cacttattattttcaagagcaaaagatgattatacaaacttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaa 167  Q
    ||||||||||||  |||| |||||||||||| |||||||| |||  ||||| ||||||||| ||||||||||||| ||||| ||||| ||||||||||||    
T  17739670 cacttattatttctaagaacaaaagatgattttacaaactagataactgctttatttatagtctaacattgacttgagccccaagaattaaatcactaaa 17739571  T
Q  168 gtgttgcacaa-taaaccataggctttaggtcagaaataaactaaaacagacagcttgccgtagaagcaaaagcagtaaaagagcaatatggggc 261  Q
     ||||||||||  ||||||| |||| ||||||||||||  ||||||| || ||||||| || ||| |||||||||| ||||| | ||||||||||    
T  17739570 ttgttgcacaagaaaaccatgggctctaggtcagaaat--actaaaataggcagcttgtcgaagaggcaaaagcagcaaaagggaaatatggggc 17739478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 8 - 239
Target Start/End: Original strand, 23517329 - 23517561
Alignment:
Q  8 agaagaacataaaataaaatagcaagaaaataaa----gaatttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattataca 103  Q
    ||||||||||||| ||| ||| ||||||||||||    ||| ||||||||||  ||||||||||||||  | | || || || ||||| |||||| ||||    
T  23517329 agaagaacataaa-taatataacaagaaaataaaagaagaacttttattaaagaaaacaattgtcactattgaattccatgaacaaaatatgattttaca 23517427  T
Q  104 aacttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaa 203  Q
    |||| ||||| |||||||||||| | ||||||||||||| ||||| ||||| ||||||||||||||||||||||| ||| ||| |||| ||| |||||||    
T  23517428 aactagatggttgctctatttattgtctaacattgacttgagccccaagaattaaatcactaaagtgttgcacaagaaaacatgggctctagttcagaaa 23517527  T
Q  204 taaactaaaacagacagcttgccgtagaagcaaaag 239  Q
    |  ||||||| || ||||||| || |||||||||||    
T  23517528 t--actaaaataggcagcttgtcgaagaagcaaaag 23517561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 81 - 239
Target Start/End: Original strand, 23574730 - 23574886
Alignment:
Q  81 caagagcaaaagatgattatacaaacttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaata 180  Q
    ||||| |||||||||||| |||||||| || ||||||||||||||||| | ||||||||||||||||| ||||| ||||||||||||||||||||||| |    
T  23574730 caagaacaaaagatgattttacaaactagagggctgctctatttatagtccaacattgacttaagccccaagaattaaatcactaaagtgttgcacaaga 23574829  T
Q  181 aaccataggctttaggtcagaaataaactaaaacagacagcttgccgtagaagcaaaag 239  Q
    || ||| ||||  |||||||||||  ||||||| ||  |||||| || |||||||||||    
T  23574830 aaacatgggctcgaggtcagaaat--actaaaataggaagcttgtcgaagaagcaaaag 23574886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 81 - 253
Target Start/End: Complemental strand, 5399262 - 5399091
Alignment:
Q  81 caagagcaaaagatgattatacaaacttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaata 180  Q
    ||||| ||||| | |||| |||||||| |||||||||||||||||||| ||||||||| ||| ||||| ||||| ||||||||||||||||||||||| |    
T  5399262 caagaacaaaaaaagattttacaaactagatggctgctctatttatagtctaacattggcttgagccccaagaattaaatcactaaagtgttgcacaaga 5399163  T
Q  181 aaccataggctttaggtcagaaataaactaaaacagacagc-ttgccgtagaagcaaaagcagtaaaagagcaa 253  Q
    |||||| |||| ||||||||||||  ||||||| || |||| ||| |  |||||||||||||| ||||| ||||    
T  5399162 aaccatgggctctaggtcagaaat--actaaaataggcagctttgtccaagaagcaaaagcagcaaaagggcaa 5399091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 40 - 211
Target Start/End: Complemental strand, 3923714 - 3923548
Alignment:
Q  40 aagaatttttattaaaagaaacaattgtcacttattattttca-agagcaaaagatgattatacaaacttgat--ggctgctctatttatagcctaacat 136  Q
    ||||| ||||||| |||| ||||||||||||| |||| ||||| ||| |||||||||||||||||| ||||||  ||||||||||||||||| ||         
T  3923714 aagaacttttattcaaagtaacaattgtcact-attaatttcagagaacaaaagatgattatacaagcttgatatggctgctctatttatagtct----- 3923621  T
Q  137 tgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaataaactaa 211  Q
     |||||||||| |||||||||||||||||||||||||||||| ||||||  |||||||||||| |||||||||||    
T  3923620 -gacttaagcc-taagaaataaatcactaaagtgttgcacaagaaaccacgggctttaggtcaaaaataaactaa 3923548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 40 - 205
Target Start/End: Original strand, 23523965 - 23524130
Alignment:
Q  40 aagaatttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaaacttgatggctgctctatttatagcctaacattga 139  Q
    ||||| ||||||||||  ||||||||||||||  | | || ||||| ||||| ||||||  | ||||| ||||| |||||||||||| |  |||||||||    
T  23523965 aagaacttttattaaagaaaacaattgtcactattgaattccaagaacaaaatatgatttcaaaaactagatggttgctctatttattgtttaacattga 23524064  T
Q  140 cttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaata 205  Q
    ||| ||||||||||| ||||||||||||||||||||||| ||| ||| |||| |||||||||||||    
T  23524065 cttgagccctaagaattaaatcactaaagtgttgcacaagaaaacatgggctctaggtcagaaata 23524130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 109 - 239
Target Start/End: Original strand, 13217402 - 13217530
Alignment:
Q  109 gatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaataaac 208  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| | |||||||| ||||  | |||||||||||||||||| ||    
T  13217402 gatggctgctctatttatagtctaacaatgacttaagccctaagaaataaatcactaaa-ttttgcacaagaaactctgggctttaggtcagaaatacac 13217500  T
Q  209 taaaacagacagcttgccgtagaagcaaaag 239  Q
     ||||||| || |||| || |||||||||||    
T  13217501 -aaaacaggcaacttgtcgaagaagcaaaag 13217530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 41 - 178
Target Start/End: Complemental strand, 20464441 - 20464304
Alignment:
Q  41 agaatttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaaacttgatggctgctctatttatagcctaacattgac 140  Q
    |||| ||||||| ||||||||||||||||||||| |||||||||| |||||||||| || |||     ||||| ||||||||||||||| ||| | ||||    
T  20464441 agaacttttattcaaagaaacaattgtcacttataattttcaagaacaaaagatgaatagacatgtccgatggttgctctatttatagcttaatactgac 20464342  T
Q  141 ttaagccctaagaaataaatcactaaagtgttgcacaa 178  Q
    |||||||||||||||||||||||||  ||||| |||||    
T  20464341 ttaagccctaagaaataaatcactagcgtgttacacaa 20464304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 9 - 155
Target Start/End: Complemental strand, 20223005 - 20222856
Alignment:
Q  9 gaagaacataaaataaaatagcaagaaaataaaga---atttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaaa 105  Q
    |||||||||||||  ||||| ||||||||||||||   | ||||||| |||||||||||||||||||||||||| ||||| ||||||||||  ||| |      
T  20223005 gaagaacataaaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatgagaatatatg 20222906  T
Q  106 cttgatggctgctctatttatagcctaacattgacttaagccctaagaaa 155  Q
     ||  | | ||||||||||||||||||| | | |||||||||| ||||||    
T  20222905 ttttctagttgctctatttatagcctaaaactaacttaagccccaagaaa 20222856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 9 - 155
Target Start/End: Complemental strand, 22116989 - 22116840
Alignment:
Q  9 gaagaacataaaataaaatagcaagaaaataaaga---atttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaaa 105  Q
    |||||||||||||  ||||| ||||||||||||||   | ||||||| |||||||||||||||||||||||||| ||||| ||||||||||  ||| |      
T  22116989 gaagaacataaaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatgagaatatatg 22116890  T
Q  106 cttgatggctgctctatttatagcctaacattgacttaagccctaagaaa 155  Q
     ||  | | ||||||||||||||||||| | | |||||||||| ||||||    
T  22116889 ttttctagttgctctatttatagcctaaaactaacttaagccccaagaaa 22116840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 46 - 162
Target Start/End: Original strand, 31965576 - 31965692
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaaacttgatggctgctctatttatagcctaacattgacttaag 145  Q
    ||||||| ||||||||||||||||||||| |||| ||||| ||||||||||  ||| |   ||| | ||||||||||||||||||||| | | |||||||    
T  31965576 ttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaag 31965675  T
Q  146 ccctaagaaataaatca 162  Q
    ||| |||||||| ||||    
T  31965676 ccccaagaaatacatca 31965692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 213
Target Start/End: Complemental strand, 29682694 - 29682484
Alignment:
Q  8 agaagaacataaaataaaatagcaagaaaataa---agaatttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaa 104  Q
    ||||||||||||||  |||||||||||||||||   |||| ||||||  ||||||| ||||||||||||  |||| |||||  |||||||||  ||| |     
T  29682694 agaagaacataaaagtaaatagcaagaaaataaagaagaacttttatccaaagaaataattgtcacttagaatttccaagaataaaagatgaaaatatat 29682595  T
Q  105 acttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaa-ccataggc-tttaggtcagaa 202  Q
       || | ||| |||||||||||||  || | | |||||||||| |||||||| |||| || | |||| ||||| ||| |||| ||| ||||||||||||    
T  29682594 gtctgctagcttctctatttatagctaaaaactaacttaagccccaagaaatatatcaatagaatgttccacaagaaacccatgggcttttaggtcagaa 29682495  T
Q  203 ataaactaaaa 213  Q
    |||||||||||    
T  29682494 ataaactaaaa 29682484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 137 - 211
Target Start/End: Complemental strand, 18993166 - 18993091
Alignment:
Q  137 tgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggc-tttaggtcagaaataaactaa 211  Q
    ||||||||||||||||||||| ||||||| | |||| ||||| ||||||| ||| |||||||||||||||||||||    
T  18993166 tgacttaagccctaagaaatatatcactagaatgttccacaagaaaccatgggcttttaggtcagaaataaactaa 18993091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 133 - 209
Target Start/End: Original strand, 25923499 - 25923576
Alignment:
Q  133 acattgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggc-tttaggtcagaaataaact 209  Q
    ||||||||||||||||||||||||| ||||||| | |||| ||||| |||||| | || |||||||||||||||||||    
T  25923499 acattgacttaagccctaagaaatacatcactagaatgttccacaagaaaccacaagcttttaggtcagaaataaact 25923576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 26821847 - 26821774
Alignment:
Q  139 acttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaataaactaaa 212  Q
    ||||||||||||||||||| |||| || | |||| ||||| ||||||| |||||||||| ||||||||||||||    
T  26821847 acttaagccctaagaaatacatcaatagaatgtttcacaagaaaccatgggctttaggttagaaataaactaaa 26821774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 26821937 - 26821873
Alignment:
Q  34 aaaataaagaatttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgatt 98  Q
    ||||||||||| ||||||||||||||| ||||||||||||||| || ||||| ||||| ||||||    
T  26821937 aaaataaagaacttttattaaaagaaataattgtcacttattaattccaagaacaaaatatgatt 26821873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 211
Target Start/End: Complemental strand, 18627399 - 18627324
Alignment:
Q  137 tgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggc-tttaggtcagaaataaactaa 211  Q
    ||||||||||||||||||||| |||| || | |||| ||||| ||||||| ||| |||||||||||||||||||||    
T  18627399 tgacttaagccctaagaaatatatcattagaatgttccacaaaaaaccatgggcttttaggtcagaaataaactaa 18627324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 211
Target Start/End: Original strand, 25339363 - 25339438
Alignment:
Q  137 tgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggc-tttaggtcagaaataaactaa 211  Q
    ||||||||||||||||||||| ||||||| | |||| ||||| ||||||  ||| |||||||||||||||||||||    
T  25339363 tgacttaagccctaagaaatatatcactagaatgttccacaagaaaccacgggcttttaggtcagaaataaactaa 25339438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 17743577 - 17743527
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| |||||||||||||||||||||||||| ||||| ||||||||||    
T  17743577 ttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatga 17743527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 18233839 - 18233889
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| |||||||||||||||||||||||||| ||||| ||||||||||    
T  18233839 ttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatga 18233889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 25949387 - 25949337
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| |||||||||||||||||||||||||| ||||| ||||||||||    
T  25949387 ttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatga 25949337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 20221281 - 20221190
Alignment:
Q  8 agaagaacataaaataaaatagcaagaaaataaaga---atttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||||||||||  ||||| ||||||||||||||   |   ||||| ||| |||||||||||||||||||||| ||||| ||||||||||    
T  20221281 agaagaacataaaagtaaataacaagaaaataaagatgaacacttattcaaaaaaacaattgtcacttattatttccaagaacaaaagatga 20221190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 22115265 - 22115174
Alignment:
Q  8 agaagaacataaaataaaatagcaagaaaataaaga---atttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||||||||||  ||||| ||||||||||||||   |   ||||| ||| |||||||||||||||||||||| ||||| ||||||||||    
T  22115265 agaagaacataaaagtaaataacaagaaaataaagatgaacacttattcaaaaaaacaattgtcacttattatttccaagaacaaaagatga 22115174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 212
Target Start/End: Original strand, 23348179 - 23348344
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttca-agagcaaaagatgattatacaaacttgatggctgctctatttatagcctaacattgacttaa 144  Q
    ||||||| |||||||||||||||||| |||| ||||| ||| |||||||||| || |     ||| | ||| |||||||||||| |||  | | ||||||    
T  23348179 ttttattcaaagaaacaattgtcact-attaatttcagagaacaaaagatgaataaatgtgattgctagctactctatttatagtctacaact-acttaa 23348276  T
Q  145 gccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaataaactaaa 212  Q
    |||| |||||||| |||| || | |||| ||||  ||||||| |||||||||||| ||||||||||||    
T  23348277 gccccaagaaatacatcaatataatgttccacatgaaaccatgggctttaggtcataaataaactaaa 23348344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 209
Target Start/End: Original strand, 19612856 - 19612926
Alignment:
Q  139 acttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaataaact 209  Q
    |||||||||| | |||||| |||| || | |||| ||||| ||||||| ||||||||||||||||||||||    
T  19612856 acttaagccccatgaaatatatcaatagaatgttccacaagaaaccatgggctttaggtcagaaataaact 19612926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 96
Target Start/End: Complemental strand, 25963979 - 25963937
Alignment:
Q  54 aaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    |||||||||||||||||||||||||| ||||| ||||||||||    
T  25963979 aaagaaacaattgtcacttattatttccaagaacaaaagatga 25963937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 96
Target Start/End: Complemental strand, 25968626 - 25968584
Alignment:
Q  54 aaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    |||||||||||||||||||||||||| ||||| ||||||||||    
T  25968626 aaagaaacaattgtcacttattatttccaagaacaaaagatga 25968584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 248
Target Start/End: Original strand, 15471204 - 15471311
Alignment:
Q  139 acttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaataaactaaaacagacagcttgccgtagaagcaaaa 238  Q
    |||||||||| |||||||| |||| || | |||||||| | ||||| | |||||||||| ||||||||||| |||||   |||||| || ||||||||||    
T  15471204 acttaagccc-aagaaatacatcaatagaatgttgcacgagaaaccgtgggctttaggttagaaataaact-aaacaagtagcttgtcgaagaagcaaaa 15471301  T
Q  239 gcagtaaaag 248  Q
    |||| |||||    
T  15471302 gcagcaaaag 15471311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 247
Target Start/End: Complemental strand, 15172209 - 15172103
Alignment:
Q  139 acttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaataaactaaaacagacagcttgccgtagaagcaaaa 238  Q
    |||||||||| |||||||| |||| || | |||| ||| | ||||| | |||||||||| ||||||||||||||  ||| |||||| || ||||||||||    
T  15172209 acttaagccc-aagaaatacatcaatagaatgttccacgagaaaccgtcggctttaggttagaaataaactaaacaaga-agcttgtcgaagaagcaaaa 15172112  T
Q  239 gcagtaaaa 247  Q
    |||| ||||    
T  15172111 gcagcaaaa 15172103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 24218815 - 24218729
Alignment:
Q  13 aacataaaataaaatagcaagaaaataaag---aatttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    |||||||||  ||||| ||||||| |||||   || ||||||| ||||||||||||||||||||||||||   ||| ||||||||||    
T  24218815 aacataaaagtaaataacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 24218729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 13217334 - 13217394
Alignment:
Q  8 agaagaacataaaataaaatagcaagaaaataaagaat---ttttattaaaagaaacaattg 66  Q
    ||||||||||||| ||||||| |||||||||||||||    |||||||||||||||||||||    
T  13217334 agaagaacataaa-taaaataacaagaaaataaagaagaacttttattaaaagaaacaattg 13217394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 98
Target Start/End: Original strand, 19612737 - 19612812
Alignment:
Q  24 aaatagcaagaaaataaa-gaatttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgatt 98  Q
    ||||| |||||||||||| ||| ||||||||||  ||||||||||||||  | | |||||||| ||||||||||||    
T  19612737 aaataacaagaaaataaaagaacttttattaaagaaaacaattgtcactattgaatttcaagaacaaaagatgatt 19612812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 9414414 - 9414324
Alignment:
Q  40 aagaatttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga-ttatacaaacttgatggctgctctatttatagc 129  Q
    ||||| ||||||| ||||||| |||||||||| |  |||  ||||| |||||||||| ||||||||  ||||||| | |||||||||||||    
T  9414414 aagaacttttattcaaagaaataattgtcactaagaattcccaagaacaaaagatgaattatacaagtttgatggttcctctatttatagc 9414324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 18195554 - 18195604
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| ||||||||||||||||||||||||||   ||| ||||||||||    
T  18195554 ttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 18195604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 18448870 - 18448802
Alignment:
Q  13 aacataaaataaaatagcaagaaaataaag---aatttttattaaaagaaacaattgtcacttattatt 78  Q
    |||||||||  ||||| ||||||| |||||   || ||||||| |||||||||||||||||||||||||    
T  18448870 aacataaaagtaaataacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatt 18448802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 18844525 - 18844475
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| ||||||||||||||||||||||||||   ||| ||||||||||    
T  18844525 ttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 18844475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 25402488 - 25402538
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| ||||||||||||||||||||||||||   ||| ||||||||||    
T  25402488 ttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 25402538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 30245293 - 30245243
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| ||| |||||||||||||||||||||| ||||| ||||| ||||    
T  30245293 ttttattcaaataaacaattgtcacttattatttccaagaacaaaatatga 30245243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 79
Target Start/End: Original strand, 18184418 - 18184451
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattt 79  Q
    ||||||| ||||||||||||||||||||||||||    
T  18184418 ttttattcaaagaaacaattgtcacttattattt 18184451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 210131 - 210217
Alignment:
Q  13 aacataaaataaaatagcaagaaaataaag---aatttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    |||||||||  ||||| ||||||| |||||   || ||||||| |||||||||||||||||| |||||||   ||| ||||||||||    
T  210131 aacataaaagtaaataacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcactcattatttcagagaacaaaagatga 210217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 211
Target Start/End: Complemental strand, 4740954 - 4740878
Alignment:
Q  137 tgacttaagccctaagaaata-aatcactaaagtgttgcacaataaaccataggc-tttaggtcagaaataaactaa 211  Q
    ||||||||||||||||||||| |||||||| | |||| ||||| |||| |  ||| |||||||||||| ||||||||    
T  4740954 tgacttaagccctaagaaatataatcactagaatgttccacaagaaactacgggcttttaggtcagaagtaaactaa 4740878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 207
Target Start/End: Original strand, 17794083 - 17794151
Alignment:
Q  139 acttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaataaa 207  Q
    ||||||| || |||||||| |||| || | |||| ||||| |||| || ||||||||||||||||||||    
T  17794083 acttaagacccaagaaatacatcagtagaatgttccacaagaaactatgggctttaggtcagaaataaa 17794151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 133; Significance: 4e-69; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 8 - 242
Target Start/End: Original strand, 4460749 - 4460984
Alignment:
Q  8 agaagaacataaaataaaatagcaagaaaataaag---aatttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaa 104  Q
    ||||||||||||||||||||| ||| |||||||||   || ||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  4460749 agaagaacataaaataaaataacaataaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatgattatacaa 4460848  T
Q  105 acttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaat 204  Q
     || |||| ||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||| |||| ||| ||||||||    
T  4460849 gctagatgactgctctatttatagtctaacattgacttgagccctaagaactaaatcactaaagtgttgcacaagaaaccatgggctctagttcagaaat 4460948  T
Q  205 aaactaaaacagacagcttgccgtagaagcaaaagcag 242  Q
      ||||||| || ||||||| || ||||||||||||||    
T  4460949 --actaaaataggcagcttgtcggagaagcaaaagcag 4460984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 8 - 261
Target Start/End: Original strand, 11483851 - 11484105
Alignment:
Q  8 agaagaacataaaataaaatagcaagaaaataaagaat---ttttattaaaagaaa-caattgtcacttatt-attttcaagagcaaaagatgattatac 102  Q
    ||||||||||||| ||||||| |||||||||||||||    |||| || ||||||| ||||||||| ||||| | || ||||| ||||||||||||||||    
T  11483851 agaagaacataaa-taaaataacaagaaaataaagaagaacttttgttgaaagaaaacaattgtca-ttattgaattccaagaacaaaagatgattatac 11483948  T
Q  103 aaacttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaa 202  Q
    || |||||||| |||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||| |||| ||| ||| |||||||||||| ||    
T  11483949 aatcttgatggttgctctatttatagtctaacaatgacttaatccctaagaaataaatcactaaagtgttgtacaagaaatcatgggctttaggtcaaaa 11484048  T
Q  203 ataaactaaaacagacagcttgccgtagaagcaaaagcagtaaaagagcaatatggggc 261  Q
    ||  ||||||| || ||||||| || ||||| |||||||| ||||| ||||||||||||    
T  11484049 at--actaaaataggcagcttgtcgaagaagaaaaagcagcaaaagggcaatatggggc 11484105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 46 - 248
Target Start/End: Original strand, 9264411 - 9264611
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaaacttgatggctgctctatttatagcctaacattgacttaag 145  Q
    ||||||| |||||||||||||||||||||||||| ||||| ||||||||| || ||||| || |||||||||||||||||||| ||||| ||||||| ||    
T  9264411 ttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatggttttacaa-ctagatggctgctctatttatagtctaacgttgacttgag 9264509  T
Q  146 ccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaataaactaaaacagacagc-ttgccgtagaagcaaaagcagta 244  Q
    ||| ||||| |||||||||||| |||||||||| ||||||| |||| ||||||||||||  ||||||| || |||| ||| || |||||||||||||| |    
T  9264510 ccccaagaattaaatcactaaattgttgcacaagaaaccatgggctctaggtcagaaat--actaaaataggcagctttgtcgaagaagcaaaagcagca 9264607  T
Q  245 aaag 248  Q
    ||||    
T  9264608 aaag 9264611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 40 - 207
Target Start/End: Original strand, 4256632 - 4256800
Alignment:
Q  40 aagaatttttattaaaagaaa-caattgtcacttattattttcaagagcaaaagatgattatacaaacttgatggctgctctatttatagcctaacattg 138  Q
    ||||| ||||||||| ||||| |||||||||||  | | |||||||| |||||||||||||||||| ||||||||||||||||||||||  |||||| ||    
T  4256632 aagaacttttattaagagaaaacaattgtcactattgaatttcaagaacaaaagatgattatacaagcttgatggctgctctatttataatctaacaatg 4256731  T
Q  139 acttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaataaa 207  Q
    ||| |||| ||||||||||||||||| ||||||||||||| |||| |  |||||||||||| |||||||    
T  4256732 actaaagcgctaagaaataaatcactgaagtgttgcacaagaaactacgggctttaggtcaaaaataaa 4256800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 8 - 248
Target Start/End: Original strand, 4983137 - 4983378
Alignment:
Q  8 agaagaacataaaataaaatagcaagaaaataaaga---atttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaa 104  Q
    |||||||||||||   ||||| ||||||||||||||   | ||||||| |||||||||||||||||||||||||| ||||| ||||||||||||  | |     
T  4983137 agaagaacataaaggtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatgattgaatat 4983236  T
Q  105 acttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaat 204  Q
      ||| | |||||||||||||||| || |||   |||||||||| |||||||| |||| || | |||| ||||| ||||||  |||||||||||||||||    
T  4983237 gtttgctagctgctctatttataggct-acaactacttaagccccaagaaatacatcaatataatgttccacaagaaaccacgggctttaggtcagaaat 4983335  T
Q  205 aaactaaaacagacagcttgccgtagaagcaaaagcagtaaaag 248  Q
    ||||| |||||| ||||||| || |||||||||| ||| |||||    
T  4983336 aaact-aaacaggcagcttgtcgaagaagcaaaaacagcaaaag 4983378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 81 - 205
Target Start/End: Complemental strand, 1462592 - 1462468
Alignment:
Q  81 caagagcaaaagatgattatacaaacttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaata 180  Q
    ||||| ||||||||| || |||||||| | |||||||||||||||||| ||||||||||||| ||||| ||||| ||||||||||||||||||||||| |    
T  1462592 caagaacaaaagatggttttacaaactagttggctgctctatttatagtctaacattgacttgagccccaagaattaaatcactaaagtgttgcacaaaa 1462493  T
Q  181 aaccataggctttaggtcagaaata 205  Q
    |||||| |||| |||||||||||||    
T  1462492 aaccatgggctctaggtcagaaata 1462468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 19 - 205
Target Start/End: Original strand, 19515357 - 19515545
Alignment:
Q  19 aaataaaatagcaagaaaataaag----aatttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaaacttgatggc 114  Q
    |||||||||| |||||||||||||    || ||||||||| | ||||||||||||||  | | ||  |||| |||||||||||| |||||||| |||||     
T  19515357 aaataaaataacaagaaaataaaggaacaaattttattaaga-aaacaattgtcactattgaattctaagaacaaaagatgattttacaaactagatgga 19515455  T
Q  115 tgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaata 205  Q
    |||||||||||||| ||||||||||||| ||||| ||| ||||||||||||||||||||||||| ||| ||| |||| |||| ||||||||    
T  19515456 tgctctatttatagtctaacattgacttgagccccaag-aataaatcactaaagtgttgcacaagaaatcatgggctctaggccagaaata 19515545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 81 - 253
Target Start/End: Original strand, 6257573 - 6257744
Alignment:
Q  81 caagagcaaaagatgattatacaaacttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaata 180  Q
    ||||| |||||||||  | |||||||| |||||||||||||| ||||| |||||||| |||| ||||||||||| ||||||||||||||||||||||| |    
T  6257573 caagaacaaaagatggatttacaaactagatggctgctctatatatagtctaacatttacttgagccctaagaattaaatcactaaagtgttgcacaaga 6257672  T
Q  181 aaccataggctttaggtcagaaataaactaaaacagacagc-ttgccgtagaagcaaaagcagtaaaagagcaa 253  Q
    |||||| ||   ||||||||||||  ||||||| || |||| ||| || |||||||||||||| ||||| ||||    
T  6257673 aaccatggggactaggtcagaaat--actaaaataggcagctttgtcgaagaagcaaaagcaggaaaagggcaa 6257744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 203
Target Start/End: Original strand, 679486 - 679685
Alignment:
Q  8 agaagaacataaaataaaatagcaagaaaataaagaat---ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaa 104  Q
    ||||||||||||||  ||||| |||||||||||||||    ||||||| ||||||| ||||||||||||  |||||||||| ||||||||||   |||||    
T  679486 agaagaacataaaagtaaataacaagaaaataaagaagaacttttattcaaagaaataattgtcacttagaattttcaagaacaaaagatgagattacaa 679585  T
Q  105 acttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaa-taaaccataggctttaggtcagaaa 203  Q
       || | |||||||  |||||||||||| | | |||||||||||||||||| |||||||| | |||| |||||  || |||| |||||||||| |||||    
T  679586 gtctgctagctgctccttttatagcctaaaactaacttaagccctaagaaattaatcactagaatgttccacaagcaacccatgggctttaggttagaaa 679685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 8 - 211
Target Start/End: Original strand, 17206384 - 17206588
Alignment:
Q  8 agaagaacataaaataaaatagcaagaaaataaaga---atttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatg-attataca 103  Q
    |||| ||||||||||||||||  |||||||||||||   | ||||||| ||||| |||||||||||||||||||| ||||| ||||||||| ||| |       
T  17206384 agaaaaacataaaataaaata--aagaaaataaagatgaacttttattcaaagagacaattgtcacttattatttccaagaacaaaagatgaattgttgt 17206481  T
Q  104 aacttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggc-tttaggtcagaa 202  Q
     | ||| | ||| ||||||||||||  | ||| ||||||||||||||||||||| ||||||| | |||| ||||| ||||||  ||| ||||||||||||    
T  17206482 ga-ttgctagctactctatttatag-tttacaatgacttaagccctaagaaatatatcactagaatgttccacaagaaaccacgggcatttaggtcagaa 17206579  T
Q  203 ataaactaa 211  Q
    |||||||||    
T  17206580 ataaactaa 17206588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 10 - 213
Target Start/End: Complemental strand, 38877502 - 38877296
Alignment:
Q  10 aagaacataaaataaaatagcaagaaaataaaga--atttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaaact 107  Q
    ||||| ||||||  ||||| ||||||| ||||||  | ||||||| ||||||||||||||||||||| |||| ||||| ||||||||||  ||| |   |    
T  38877502 aagaagataaaagtaaataacaagaaagtaaagagaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtt 38877403  T
Q  108 tgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggc-tttaggtcagaaataa 206  Q
    || |  |||||||||||||||||||| | | |||||||||| ||||| || |||| || | |||| ||||| ||||||| ||| |||| ||||||| ||     
T  38877402 tgctatctgctctatttatagcctaaaactaacttaagccccaagaattacatcaatagaatgttccacaagaaaccatgggcttttaagtcagaattac 38877303  T
Q  207 actaaaa 213  Q
    |||||||    
T  38877302 actaaaa 38877296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 3194557 - 3194611
Alignment:
Q  111 tggctgctctatttatagcctaacattgacttaagccctaagaaataaatcacta 165  Q
    ||||||||||||||||||||||| | |||||||||||||||||||| ||||||||    
T  3194557 tggctgctctatttatagcctaaaactgacttaagccctaagaaatcaatcacta 3194611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 248
Target Start/End: Complemental strand, 4541220 - 4541020
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaaacttgatggctgctctatttatagcctaacattgacttaag 145  Q
    ||||||| |||||||||||||||||||||||||| || || | |||||||| |  |     ||| |  ||||||||||||||| |||  | | |||||||    
T  4541220 ttttattcaaagaaacaattgtcacttattatttgcacgaacgaaagatgaatgaatgtgtttgctaactgctctatttatagtctacaact-acttaag 4541122  T
Q  146 ccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaataaactaaaacagacagcttgccgtagaagcaaaagcagtaa 245  Q
    ||| |||||||| |||| || |||||| ||||| |||| || | |||||||||| ||||||||| ||| || || |||| || |||||||||||||| ||    
T  4541121 ccccaagaaatacatcaatagagtgttccacaagaaactatggactttaggtcacaaataaact-aaataggcaccttgtcgaagaagcaaaagcagcaa 4541023  T
Q  246 aag 248  Q
    |||    
T  4541022 aag 4541020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 8787308 - 8787358
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  8787308 ttttattcaaagaaacaattgtcacttattattttcaagaacaaaagatga 8787358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 33609816 - 33609727
Alignment:
Q  8 agaagaacataaaataaaatagcaagaaaataaaga---atttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    |||||||||||||||||||||  |||||||||||||   | ||||||| ||||||||||||||||||||||||||   ||| ||||||||||    
T  33609816 agaagaacataaaataaaata--aagaaaataaagatgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 33609727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 139 - 248
Target Start/End: Complemental strand, 17911560 - 17911452
Alignment:
Q  139 acttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaataaactaaaacagacagcttgccgtagaagcaaaa 238  Q
    |||||||||| |||||||| |||| || | |||| ||||| |||||| | ||||||||||||||||||||| ||| || ||||||| |  ||||||||||    
T  17911560 acttaagccccaagaaatacatcaatagaatgttccacaagaaaccacaagctttaggtcagaaataaact-aaataggcagcttgtcagagaagcaaaa 17911462  T
Q  239 gcagtaaaag 248  Q
    |||| |||||    
T  17911461 gcagcaaaag 17911452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 41722765 - 41722715
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| |||||||||||||||||||||||||| ||||| ||||||||||    
T  41722765 ttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatga 41722715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 3376524 - 3376576
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgatt 98  Q
    ||||||| ||||||||||||||||||||||| || ||||| ||||||||||||    
T  3376524 ttttattcaaagaaacaattgtcacttattacttccaagaacaaaagatgatt 3376576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 137 - 211
Target Start/End: Complemental strand, 5826026 - 5825951
Alignment:
Q  137 tgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggc-tttaggtcagaaataaactaa 211  Q
    ||||||||||||||||||||| | ||||| | |||| ||||| ||||||| ||| |||||||||||| ||||||||    
T  5826026 tgacttaagccctaagaaatataacactagaatgttccacaagaaaccatgggcttttaggtcagaagtaaactaa 5825951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 17946787 - 17946737
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| ||||||||||||| |||||||||||| ||||| ||||||||||    
T  17946787 ttttattcaaagaaacaattgacacttattatttccaagaacaaaagatga 17946737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 145
Target Start/End: Original strand, 21005640 - 21005685
Alignment:
Q  100 tacaaacttgatggctgctctatttatagcctaacattgacttaag 145  Q
    |||||||| ||||| |||||||||||||| ||||||||||||||||    
T  21005640 tacaaactagatggttgctctatttatagtctaacattgacttaag 21005685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 16076819 - 16076905
Alignment:
Q  13 aacataaaataaaatagcaagaaaataaag---aatttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    |||||||||  ||||| ||||||| |||||   || ||||||| ||||||||||||||||||||||||||   ||| ||||||||||    
T  16076819 aacataaaagtaaataacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 16076905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 137 - 211
Target Start/End: Original strand, 16897382 - 16897457
Alignment:
Q  137 tgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggc-tttaggtcagaaataaactaa 211  Q
    ||||||||||||||||||||| | | ||| | |||| ||||| ||||||  ||| |||||||||||||||||||||    
T  16897382 tgacttaagccctaagaaatataacgctagaatgttccacaagaaaccaagggcttttaggtcagaaataaactaa 16897457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 648813 - 648863
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| ||||||||||||||||||||||||||   ||| ||||||||||    
T  648813 ttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 648863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 782803 - 782853
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| ||||||||||||||||||||||||||   ||| ||||||||||    
T  782803 ttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 782853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 8780435 - 8780485
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| |||||||||||| | ||||||||||| ||||| ||||||||||    
T  8780435 ttttattcaaagaaacaattataacttattatttccaagaacaaaagatga 8780485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 12561999 - 12561949
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| ||||||||||||||||||||||||||   ||| ||||||||||    
T  12561999 ttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 12561949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 12567694 - 12567644
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| ||||||||||||||||| ||||||||  |||| ||||||||||    
T  12567694 ttttattcaaagaaacaattgtcacatattatttaaaagaacaaaagatga 12567644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 14941756 - 14941806
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| ||||||||||||||||||||||||||   ||| ||||||||||    
T  14941756 ttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 14941806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 15369349 - 15369399
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| ||||||||||||||||||||||||||   ||| ||||||||||    
T  15369349 ttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 15369399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 15707267 - 15707317
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| ||||||||||||||||||||||||||   ||| ||||||||||    
T  15707267 ttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 15707317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 33612296 - 33612346
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| ||||||||||||||||||||||||||   ||| ||||||||||    
T  33612296 ttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 33612346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 35964248 - 35964298
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| ||||||||||||||||||||||||||   ||| ||||||||||    
T  35964248 ttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 35964298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 48340620 - 48340670
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| ||||||||||||||||||||||||||   ||| ||||||||||    
T  48340620 ttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 48340670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 48355612 - 48355662
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| ||| ||||||||||||||||||||||  |||| ||||||||||    
T  48355612 ttttattcaaataaacaattgtcacttattatttcaaagaacaaaagatga 48355662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 2325859 - 2325924
Alignment:
Q  34 aaaataaagaatttttattaaaagaaacaattgtcacttatt-attttcaagagcaaaagatgatt 98  Q
    |||| |||||||||||||||| | | |||||||||||||||| | || ||||| ||||||||||||    
T  2325859 aaaagaaagaatttttattaagaaagacaattgtcacttattgaattccaagaacaaaagatgatt 2325924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 211
Target Start/End: Complemental strand, 13434846 - 13434781
Alignment:
Q  147 cctaagaaataaatcactaaagtgttgcacaataaaccataggctt-taggtcagaaataaactaa 211  Q
    |||||| |||| ||||||| | |||| ||||||||||||  ||||| |||||||||||||||||||    
T  13434846 cctaagcaatacatcactagaatgttccacaataaaccaagggcttataggtcagaaataaactaa 13434781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 155
Target Start/End: Original strand, 4317077 - 4317125
Alignment:
Q  108 tgatggctgctctatttatagcctaaca-ttgacttaagccctaagaaa 155  Q
    |||||||||||||||||| ||||||| | || |||||||||||||||||    
T  4317077 tgatggctgctctatttacagcctaaaagttaacttaagccctaagaaa 4317125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 132; Significance: 1e-68; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 8 - 238
Target Start/End: Original strand, 11922436 - 11922668
Alignment:
Q  8 agaagaacataaaataaaatagcaagaaaataaagaat---ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaa 104  Q
    ||||||||||||| ||||||| |||||||||||||||    |||||||||||||||||||||||||||||||||| ||||| ||||| || | |||||||    
T  11922436 agaagaacataaa-taaaataacaagaaaataaagaagaacttttattaaaagaaacaattgtcacttattatttccaagaacaaaatattaatatacaa 11922534  T
Q  105 acttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaat 204  Q
      ||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||  |||||||||||||||||    
T  11922535 gtttgatggctactctatttatagcctaacaatgacttaagccctaagaaatagatcactaaagtgttgcacaagaaaccaagggctttaggtcagaaat 11922634  T
Q  205 aaactaaaacagacagcttgccgtagaagcaaaa 238  Q
    ||||||||| ||  |||||| || ||||||||||    
T  11922635 aaactaaaataggtagcttgtcgaagaagcaaaa 11922668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 8 - 261
Target Start/End: Complemental strand, 38652246 - 38651994
Alignment:
Q  8 agaagaacataaaataaaatagcaagaaaataaaga---atttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaa 104  Q
    |||||||||||||||||| || |||| |||||| ||   | ||||||| |||||||||||||||||||||||||| ||| | |||||||||||| |||||    
T  38652246 agaagaacataaaataaa-taacaaggaaataaggatgaacttttattcaaagaaacaattgtcacttattatttccaataacaaaagatgatt-tacaa 38652149  T
Q  105 acttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaat 204  Q
    ||| |||| ||||||||||||||| ||||||||||||| ||||| ||||  |||| |||||||||||||||||| ||| ||| |||| ||| | | ||||    
T  38652148 actagatgactgctctatttatagtctaacattgacttgagccccaagatttaaaacactaaagtgttgcacaagaaaacatgggctctagtttaaaaat 38652049  T
Q  205 aaactaaaacagacagcttgccgtagaagcaaaagcagtaaaagagcaatatggggc 261  Q
      ||||||| |  ||||||| || |||||||||||||  ||||| ||||||||||||    
T  38652048 --actaaaataagcagcttgtcgaagaagcaaaagcaacaaaagggcaatatggggc 38651994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 58 - 248
Target Start/End: Original strand, 12345989 - 12346179
Alignment:
Q  58 aaacaattgtcacttattattttcaagagcaaaagatgattatacaaacttgatggctgctctatttatagcctaacattgacttaagccctaagaaata 157  Q
    ||||||||||||||  | | || ||||| ||| ||||||  ||| ||  |||||||||||||||||||||||| || ||||| |||||||||||||||||    
T  12345989 aaacaattgtcactattaaattccaagaacaagagatgaaaatataagtttgatggctgctctatttatagccaaatattgatttaagccctaagaaata 12346088  T
Q  158 aatcactaaagtgttgcacaataaaccataggctttaggtcagaaataaactaaaacagacagcttgccgtagaagcaaaagcagtaaaag 248  Q
    ||| |||| |||||| ||||| ||||||| |||||||||||||||||||||| ||||||||||||||  | ||||||||||| || |||||    
T  12346089 aattactacagtgttacacaagaaaccatgggctttaggtcagaaataaacttaaacagacagcttgtagaagaagcaaaagtagcaaaag 12346179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 41 - 249
Target Start/End: Original strand, 5513662 - 5513869
Alignment:
Q  41 agaatttttattaaaagaaacaattgtcacttattatttt-caagagcaaaagatgattatacaaacttgatggctgctctatttatagcctaacattga 139  Q
    |||| ||||||| ||||||||||||||||||||||| ||| ||||| ||||||||||||  | |   ||  | |||||| ||||||||| |||| | | |    
T  5513662 agaacttttattcaaagaaacaattgtcacttattaatttacaagaacaaaagatgattgaatatgttttctagctgctttatttatagtctaaaact-a 5513760  T
Q  140 cttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaataaactaaaacagacagcttgccgtagaagcaaaag 239  Q
    ||||||||| ||||| || |||| || | |||| || || ||||||| |||||||||||||||||||||| |||||||||||||| || |||||||||||    
T  5513761 cttaagccccaagaattacatcaatagaatgttccataagaaaccatgggctttaggtcagaaataaact-aaacagacagcttgtcgaagaagcaaaag 5513859  T
Q  240 cagtaaaaga 249  Q
    ||| ||||||    
T  5513860 cagcaaaaga 5513869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 46 - 213
Target Start/End: Original strand, 23793624 - 23793791
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaaacttgatggctgctctatttatagcctaacattgacttaag 145  Q
    ||||||| ||||||||||||| ||||||| |||| ||||| ||||||||||  ||| |   ||| | ||||||||||||||||||||| | | |||||||    
T  23793624 ttttattcaaagaaacaattg-cacttataatttccaagaacaaaagatgagaatatatgtttgttagctgctctatttatagcctaaaactaacttaag 23793722  T
Q  146 ccctaagaaataaatcactaaagtgttgcacaataaaccataggc-tttaggtcagaaataaactaaaa 213  Q
    ||| |||||||| |||| || | |||| ||||| ||||||| ||| ||||||||| || || |||||||    
T  23793723 ccccaagaaatacatcaatagaatgttccacaagaaaccatgggcttttaggtcaaaattacactaaaa 23793791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 11888998 - 11889048
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| |||||||||||||||||||||||||| ||||| ||||||||||    
T  11888998 ttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatga 11889048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 11902643 - 11902693
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| |||||||||||||||||||||||||| ||||| ||||||||||    
T  11902643 ttttatttaaagaaacaattgtcacttattatttccaagaacaaaagatga 11902693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 248
Target Start/End: Original strand, 33331118 - 33331226
Alignment:
Q  139 acttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaataaactaaaacagacagcttgccgtagaagcaaaa 238  Q
    |||||||||| |||||||| |||| || | |||| ||||| |||| || |||||||||||| ||||||||| ||| || ||||||| || ||||| ||||    
T  33331118 acttaagccccaagaaatacatcagtagaatgttccacaagaaactatgggctttaggtcataaataaact-aaataggcagcttgtcgaagaagtaaaa 33331216  T
Q  239 gcagtaaaag 248  Q
    |||| |||||    
T  33331217 gcagcaaaag 33331226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 137 - 211
Target Start/End: Original strand, 3772299 - 3772374
Alignment:
Q  137 tgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggc-tttaggtcagaaataaactaa 211  Q
    ||||||||||||||||||||| | ||||| | |||| ||||| |||||| || | |||||||||||||||||||||    
T  3772299 tgacttaagccctaagaaatataacactacaatgttccacaagaaaccaaagacttttaggtcagaaataaactaa 3772374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 3355320 - 3355270
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| |||||||||||||||||||||||||||  ||| ||||||||||    
T  3355320 ttttattcaaagaaacaattgtcacttattattttatagaacaaaagatga 3355270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 31593956 - 31593906
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| ||||||||||||||||||||||||||  |||| ||||||||||    
T  31593956 ttttattcaaagaaacaattgtcacttattatttcaaagaacaaaagatga 31593906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 6518465 - 6518379
Alignment:
Q  13 aacataaaataaaatagcaagaaaataaag---aatttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    |||||||||  ||||| ||||||| |||||   || ||||||| ||||||||||||||||||||||||||   ||| ||||||||||    
T  6518465 aacataaaagtaaataacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 6518379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 20059183 - 20059235
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgatt 98  Q
    ||||||| ||||||||||||||||||||||||||   ||| ||||||||||||    
T  20059183 ttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatgatt 20059235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 17168944 - 17168876
Alignment:
Q  8 agaagaacataaaataaaatagcaagaaaata---aagaatttttattaaaagaaacaattgtcactta 73  Q
    ||||||||||||||  ||||| ||||||||||   ||||| ||||||| ||||||| ||||||||||||    
T  17168944 agaagaacataaaagtaaataacaagaaaatagagaagaacttttattcaaagaaataattgtcactta 17168876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 17174516 - 17174448
Alignment:
Q  8 agaagaacataaaataaaatagcaagaaaata---aagaatttttattaaaagaaacaattgtcactta 73  Q
    ||||||||||||||  ||||| ||||||||||   ||||| ||||||| ||||||| ||||||||||||    
T  17174516 agaagaacataaaagtaaataacaagaaaatagagaagaacttttattcaaagaaataattgtcactta 17174448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 79
Target Start/End: Original strand, 24125248 - 24125281
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattt 79  Q
    ||||||| ||||||||||||||||||||||||||    
T  24125248 ttttattcaaagaaacaattgtcacttattattt 24125281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 79
Target Start/End: Original strand, 43701593 - 43701626
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattt 79  Q
    ||||||| ||||||||||||||||||||||||||    
T  43701593 ttttattcaaagaaacaattgtcacttattattt 43701626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 16951957 - 16951909
Alignment:
Q  48 ttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||| ||||||||||||||||||||||||||   ||| ||||||||||    
T  16951957 ttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 16951909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 21102222 - 21102308
Alignment:
Q  13 aacataaaataaaatagcaagaaaataaag---aatttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    |||||||||  ||||| ||||||| |||||   || ||||||| ||||||| ||||||||||||||||||   ||| ||||||||||    
T  21102222 aacataaaagtaaataacaagaaagtaaaggtgaacttttattcaaagaaataattgtcacttattatttaagagaacaaaagatga 21102308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 116; Significance: 5e-59; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 41 - 248
Target Start/End: Original strand, 16384973 - 16385180
Alignment:
Q  41 agaatttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaaacttgatggctgctctatttatagcctaacattgac 140  Q
    |||| ||||||| ||||||||||||||||||||| ||||  |||| ||||||| ||||||||||  |||||||||||||||||||||| |||||||||||    
T  16384973 agaacttttattcaaagaaacaattgtcacttataatttcaaagaacaaaagacgattatacaaggttgatggctgctctatttatagtctaacattgac 16385072  T
Q  141 ttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaataaactaaaacagacagcttgccgtagaagcaaaagc 240  Q
    |||||||||| |||||||||||||| |||||| ||||| ||||  | |||||||||||||||||||||| ||||||  |||||| || ||||||||||||    
T  16385073 ttaagccctacgaaataaatcactagagtgttacacaagaaactgtgggctttaggtcagaaataaactcaaacaggaagcttgtcgaagaagcaaaagc 16385172  T
Q  241 agtaaaag 248  Q
    || |||||    
T  16385173 agcaaaag 16385180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 7 - 211
Target Start/End: Original strand, 16148438 - 16148640
Alignment:
Q  7 gagaagaacataaaataaaatagcaagaaaataaagaatttttattaaaagaaa-caattgtcacttattattttca-agagcaaaagatgattatacaa 104  Q
    ||||||||||||||||||||||   | ||||  ||||| ||||||| ||||||| ||||||||||| ||||  |||| ||| ||||||||||||||||||    
T  16148438 gagaagaacataaaataaaata---ataaaaagaagaaattttattcaaagaaaacaattgtcact-attaaattcagagaacaaaagatgattatacaa 16148533  T
Q  105 acttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaat 204  Q
     ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||  |||||||||||| ||||    
T  16148534 gcttgatggctgctctatttatagtctaacattgacttaagccctaagaaataaatcactaaagtattgcacaagaaaccacgggctttaggtcaaaaat 16148633  T
Q  205 aaactaa 211  Q
    |||||||    
T  16148634 aaactaa 16148640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 46 - 248
Target Start/End: Complemental strand, 8648925 - 8648725
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaaacttgatggctgctctatttatagcctaacattgacttaag 145  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||| || ||||| || |||||||||||||||||||| ||||||||||||| ||    
T  8648925 ttttattcaaagaaacaattgtcacttattattttcaagaacaaaagatggttttacaa-ctagatggctgctctatttatagtctaacattgacttgag 8648827  T
Q  146 ccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaataaactaaaacagacagc-ttgccgtagaagcaaaagcagta 244  Q
    ||| ||||| |||||||||||| |||||||||| ||||||| |||| ||||||| ||||  ||||||| || |||| |||  | |||||||||||||| |    
T  8648826 ccccaagaattaaatcactaaattgttgcacaagaaaccatgggctctaggtcataaat--actaaaataggcagctttgttgaagaagcaaaagcagca 8648729  T
Q  245 aaag 248  Q
    ||||    
T  8648728 aaag 8648725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 46 - 248
Target Start/End: Original strand, 39286647 - 39286849
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaaacttgatggctgctctatttatagcctaaca--ttgactta 143  Q
    ||||||| |||||||||||||||||||||| ||| ||||| ||||||||| || ||||| || |||||||||||||||||||| ||||||  |||||||     
T  39286647 ttttattcaaagaaacaattgtcacttattttttccaagaacaaaagatggttttacaa-ctagatggctgctctatttatagtctaacacattgacttg 39286745  T
Q  144 agccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaataaactaaaacagacagc-ttgccgtagaagcaaaagcag 242  Q
    ||||| ||||| |||||||||||| ||||||| || |||||||||||| ||||||||||||  ||||||| || |||| ||| || ||||||||||||||    
T  39286746 agccccaagaattaaatcactaaattgttgcataagaaaccataggctctaggtcagaaat--actaaaataggcagctttgtcgaagaagcaaaagcag 39286843  T
Q  243 taaaag 248  Q
     |||||    
T  39286844 caaaag 39286849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 73 - 248
Target Start/End: Original strand, 30819122 - 30819296
Alignment:
Q  73 attattttcaagagcaaaagatgattatacaaacttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgtt 172  Q
    |||||||  |||| |||||||||||| |||||||| |||||||||||||||||||| |||||||||| || ||||| ||||| |||||||||||| ||||    
T  30819122 attatttctaagaacaaaagatgattttacaaactagatggctgctctatttatagtctaacattgatttgagccccaagaattaaatcactaaaatgtt 30819221  T
Q  173 gcacaataaaccataggctttaggtcagaaataaact-aaaacagacagcttgccgtagaagcaaaagcagtaaaag 248  Q
    |||||| ||||||| |||| ||||||||||||  ||| |||| ||  |||||| || |||||||||||||| |||||    
T  30819222 gcacaagaaaccatgggctctaggtcagaaat--actaaaaataggtagcttgtcggagaagcaaaagcagcaaaag 30819296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 57 - 248
Target Start/End: Original strand, 20860786 - 20860976
Alignment:
Q  57 gaaacaattgtcacttattattttcaagagcaaaagatgattatacaaacttgatggctgctctatttatagcctaacattgacttaagccctaagaaat 156  Q
    |||||||||||||||  | |||| ||||| ||| |||||||| || |   ||| | |||||||||||||||| |||  | | |||||||||| |||||||    
T  20860786 gaaacaattgtcactattaatttccaagaacaagagatgattgtatatgtttgctagctgctctatttatagtctacaact-acttaagccccaagaaat 20860884  T
Q  157 aaatcactaaagtgttgcacaataaaccataggctttaggtcagaaataaactaaaacagacagcttgccgtagaagcaaaagcagtaaaag 248  Q
    | |||| |  | |||| ||||| ||||||| |||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||    
T  20860885 acatcaatggaatgttccacaagaaaccatgggctttaggtcagaaataaacttaaacagacagcttgtcgaagaagcaaaagcagtaaaag 20860976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 25405069 - 25405184
Alignment:
Q  8 agaagaacataaaataaaatagcaagaaaataaagaat---ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaa 104  Q
    ||||||||||||| ||||||| |||||||||||||||    |||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||    
T  25405069 agaagaacataaa-taaaataacaagaaaataaagaagaacttttattaaaagaaacaattgtcacttattatttccaagaacaaaagatgactatacaa 25405167  T
Q  105 acttgatggctgctcta 121  Q
      |||||||||||||||    
T  25405168 gtttgatggctgctcta 25405184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 139 - 248
Target Start/End: Complemental strand, 23298860 - 23298751
Alignment:
Q  139 acttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaataaactaaaacagacagcttgccgtagaagcaaaa 238  Q
    |||||||||| |||||||| |||| |||| |||| ||||| ||||||| |||||||||||||||||||||||||  ||  |||||  || ||||||||||    
T  23298860 acttaagccccaagaaatacatcaataaaatgttccacaaaaaaccatgggctttaggtcagaaataaactaaattaggtagcttttcggagaagcaaaa 23298761  T
Q  239 gcagtaaaag 248  Q
    |||| |||||    
T  23298760 gcagcaaaag 23298751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 130 - 203
Target Start/End: Complemental strand, 43998419 - 43998345
Alignment:
Q  130 ctaacattgacttaagccct-aagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaa 203  Q
    ||||||||||||| |||||  ||||| |||||||||||| |||||||||| ||||||||||||||||||||||||    
T  43998419 ctaacattgacttgagcccccaagaattaaatcactaaattgttgcacaagaaaccataggctttaggtcagaaa 43998345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 211
Target Start/End: Original strand, 13799440 - 13799643
Alignment:
Q  8 agaagaacataaaataaaatagcaagaaaataaaga---atttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaa 104  Q
    |||||||||||||||||||||  |||||| ||||||   | ||||||| ||| ||||||||||||||||||||||   ||| ||||||||||||          
T  13799440 agaagaacataaaataaaata--aagaaa-taaagatgaacttttattcaaataaacaattgtcacttattatttcagagaacaaaagatgatttgttgt 13799536  T
Q  105 acttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggc-tttaggtcagaaa 203  Q
       || | ||| ||||||||||||  || || ||||||||| ||||||||||| ||||||| | |||| ||||| ||||||| ||| |||||||||| ||    
T  13799537 gtctgctagctactctatttatagttta-caatgacttaagacctaagaaatatatcactagaatgttccacaagaaaccatgggcttttaggtcaggaa 13799635  T
Q  204 taaactaa 211  Q
    ||||||||    
T  13799636 taaactaa 13799643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 17986632 - 17986584
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagat 94  Q
    ||||||| |||||||||||||||||||||||||| ||||| ||||||||    
T  17986632 ttttattcaaagaaacaattgtcacttattatttccaagaacaaaagat 17986584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 21784214 - 21784300
Alignment:
Q  13 aacataaaataaaatagcaagaaaataaag---aatttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    |||||||||  ||||| ||||||| |||||   || ||||||| |||||||||||||||||||||||||||  ||| ||||||||||    
T  21784214 aacataaaagtaaataacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattattttagagaacaaaagatga 21784300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 15347075 - 15347126
Alignment:
Q  114 ctgctctatttatagcctaacattgacttaagccctaagaaataaatcacta 165  Q
    |||||||||||||||||||| | ||||||||| |||||||| ||||||||||    
T  15347075 ctgctctatttatagcctaaaactgacttaagtcctaagaagtaaatcacta 15347126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 178
Target Start/End: Complemental strand, 20493474 - 20493431
Alignment:
Q  135 attgacttaagccctaagaaataaatcactaaagtgttgcacaa 178  Q
    ||||||||||||||||||||||||||||||| |||||| |||||    
T  20493474 attgacttaagccctaagaaataaatcactagagtgttacacaa 20493431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 2386284 - 2386234
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| |||||||||||||||||||||||||| | ||| ||||||||||    
T  2386284 ttttattcaaagaaacaattgtcacttattatttccgagaacaaaagatga 2386234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 20412327 - 20412277
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||||||  |||||||||||||||||||||| ||||| ||||||||||    
T  20412327 ttttattaaagaaaacaattgtcacttattatttccaagaacaaaagatga 20412277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 96
Target Start/End: Original strand, 20899430 - 20899472
Alignment:
Q  54 aaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    |||||||||||||||||||||||||| ||||| ||||||||||    
T  20899430 aaagaaacaattgtcacttattatttccaagaacaaaagatga 20899472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 96
Target Start/End: Original strand, 28206385 - 28206439
Alignment:
Q  42 gaatttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||||||| ||||||||||||||||||||||||||   ||| ||||||||||    
T  28206385 gaatttttattcaaagaaacaattgtcacttattatttctgagaacaaaagatga 28206439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 17716814 - 17716766
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagat 94  Q
    ||||||| |||||||||||||||||||||||||||  ||| ||||||||    
T  17716814 ttttattcaaagaaacaattgtcacttattattttagagaacaaaagat 17716766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 21792376 - 21792426
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| ||||||||||||||||||||||||||   ||| ||||||||||    
T  21792376 ttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 21792426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 41802333 - 41802283
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| ||||||||||||||||||||||||||   ||| ||||||||||    
T  41802333 ttttattcaaagaaacaattgtcacttattatttcatagaacaaaagatga 41802283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 44538303 - 44538253
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| |||||||||||||||||||| ||||||  ||| ||||||||||    
T  44538303 ttttattcaaagaaacaattgtcacttaatatttttgagaacaaaagatga 44538253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 79
Target Start/End: Original strand, 30819079 - 30819112
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattt 79  Q
    ||||||| ||||||||||||||||||||||||||    
T  30819079 ttttattcaaagaaacaattgtcacttattattt 30819112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 115; Significance: 2e-58; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 46 - 248
Target Start/End: Complemental strand, 15583871 - 15583669
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaaacttgatggctgctctatttatagcctaacattgacttaag 145  Q
    ||||||| ||||||||| |||||||||||||||| ||||| ||||||||||  ||||||  ||| | |||||||||||||||| |||||| ||||||||     
T  15583871 ttttattcaaagaaacagttgtcacttattatttccaagaacaaaagatgagaatacaagtttggtcgctgctctatttatagtctaacaatgacttaaa 15583772  T
Q  146 ccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaataaactaaaacagacagcttgccgtagaagcaaaagcagtaa 245  Q
    ||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||| || |||||||  | |||||||||||||| ||    
T  15583771 ccctaagaaataaatcactgaagtgttgcacaagaaaccatgggctttaggtcagaaataaactaaaataggcagcttgttgaagaagcaaaagcagcaa 15583672  T
Q  246 aag 248  Q
    |||    
T  15583671 aag 15583669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 8 - 262
Target Start/End: Original strand, 25337141 - 25337396
Alignment:
Q  8 agaagaacataaaataaaatagcaagaaaataaa----gaatttttattaaaagaaa-caattgtcacttattattttcaagagcaaaagatgattatac 102  Q
    ||||||||||||| ||||||| ||||||| ||||    ||| ||||||||| ||||| |||||||||||  | | || ||||| |||||||||||| |||    
T  25337141 agaagaacataaa-taaaataacaagaaattaaaagaagaacttttattaagagaaaacaattgtcactattgaattccaagaacaaaagatgattctac 25337239  T
Q  103 aaacttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaa 202  Q
    || || || ||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||| ||||||| ||||||| |||| ||||||||||    
T  25337240 aagctagaaggctgctctatttatagactaacattgacttgagccctaagatataaatcactaaagtg-tgcacaagaaaccatgggctctaggtcagaa 25337338  T
Q  203 ataaactaaaacagacagcttgccgtagaagcaaaagcagtaaaagagcaatatggggca 262  Q
    ||  ||||||| || ||||||| || |||||||||||||| |||||  ||||| ||||||    
T  25337339 at--actaaaataggcagcttgtcgaagaagcaaaagcagcaaaaggacaataaggggca 25337396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 45 - 238
Target Start/End: Complemental strand, 20852184 - 20851993
Alignment:
Q  45 tttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaaacttgatggctgctctatttatagcctaacattgacttaa 144  Q
    |||||||| ||||||||||||||||||||||||||  |||| |||||||||||   | |   ||| | ||||||||||||||||||||  | | ||||||    
T  20852184 tttttattcaaagaaacaattgtcacttattatttcgaagaacaaaagatgatacaatatgtttgctcgctgctctatttatagcctataact-acttaa 20852086  T
Q  145 gccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaataaactaaaacagacagcttgccgtagaagcaaaa 238  Q
    |||| |||||||| |||| || | |||| ||||| ||||||| |||||||||||||||||||||| |||||| ||||||| || ||||||||||    
T  20852085 gccccaagaaatacatcaatagaatgttccacaagaaaccatgggctttaggtcagaaataaact-aaacaggcagcttgtcgaagaagcaaaa 20851993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 87 - 186
Target Start/End: Original strand, 24366362 - 24366461
Alignment:
Q  87 caaaagatgattatacaaacttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccat 186  Q
    ||||||||| || |||||||| |||| ||||||||||||||| ||||||||||||| ||||| ||||| |||||||||||| |||||||||| |||||||    
T  24366362 caaaagatggttttacaaactagatgactgctctatttatagtctaacattgacttgagccccaagaattaaatcactaaattgttgcacaagaaaccat 24366461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 8 - 241
Target Start/End: Original strand, 19124319 - 19124552
Alignment:
Q  8 agaagaacataaaataaaatagcaagaaaataaaga---atttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaa 104  Q
    |||| |||||||||||||  | ||||||||||||||   | ||||||| ||||||||||||||||||||||||||||| || |||||||||| |  | |     
T  19124319 agaataacataaaataaacaa-caagaaaataaagatgaacttttattcaaagaaacaattgtcacttattattttcatgaacaaaagatgaatgaatat 19124417  T
Q  105 acttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaat 204  Q
      ||| | ||| |||||||||||| |||| | | |||||||||| |||||||  |||| || | |||| ||||| ||||||| ||||||| |||| ||||    
T  19124418 gtttgctagctactctatttatagtctaaaact-acttaagccccaagaaatgcatcaatagaatgtttcacaagaaaccatgggctttatgtcataaat 19124516  T
Q  205 aaactaaaacagacagcttgccgtagaagcaaaagca 241  Q
    ||||| ||| || ||||||| || |||||||||||||    
T  19124517 aaact-aaataggcagcttgtcgaagaagcaaaagca 19124552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 89 - 186
Target Start/End: Original strand, 24369087 - 24369184
Alignment:
Q  89 aaagatgattatacaaacttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccat 186  Q
    ||||||| || |||||||| |||| ||||||||||||||| ||||||||||||| ||||| ||||| ||||||| |||| |||||||||| |||||||    
T  24369087 aaagatggttttacaaactagatgactgctctatttatagtctaacattgacttgagccccaagaattaaatcattaaattgttgcacaagaaaccat 24369184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 8 - 238
Target Start/End: Original strand, 19013020 - 19013244
Alignment:
Q  8 agaagaacataaaataaaatagcaagaaaataaaga---atttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaa 104  Q
    |||||||||||||||||||||  |||||||||| ||   | ||||||| |||||||||||||||||||        ||||| ||||||||||||  | |     
T  19013020 agaagaacataaaataaaata--aagaaaataatgatgaacttttattcaaagaaacaattgtcacttc-------caagaacaaaagatgattgaatat 19013110  T
Q  105 acttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaa-agtgttgcacaataaaccataggctttaggtcagaaa 203  Q
      ||| | |||||||||||||||| |||  | | |||||||||| |||||||| |||| ||  | |||| ||||| ||||||| | ||||||||||||||    
T  19013111 gtttgttagctgctctatttatagtctacaact-acttaagccccaagaaatacatcaataggaatgttccacaagaaaccatggactttaggtcagaaa 19013209  T
Q  204 taaactaaaacagacagcttgccgtagaagcaaaa 238  Q
    |||||||||| || ||||||| |  ||||||||||    
T  19013210 taaactaaaataggcagcttgtcaaagaagcaaaa 19013244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 249
Target Start/End: Original strand, 23257130 - 23257239
Alignment:
Q  139 acttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaataaactaaaacagacagcttgccgtagaagcaaaa 238  Q
    |||||||||  |||||||| |||| || | |||| ||||| ||||||| | |||||||||||||||||||| ||||||  |||||| || ||||||||||    
T  23257130 acttaagccacaagaaatacatcaatagaatgttccacaagaaaccatggactttaggtcagaaataaact-aaacaggaagcttgtcgaagaagcaaaa 23257228  T
Q  239 gcagtaaaaga 249  Q
    |||| ||||||    
T  23257229 gcagcaaaaga 23257239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 82 - 248
Target Start/End: Original strand, 25858695 - 25858864
Alignment:
Q  82 aagagcaaaagatgattatacaaacttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcacta-----aagtgttgcac 176  Q
    |||| ||||||||| || |||||||| || | ||||||||||||||| ||||||||||||| | ||| ||||| |||||| |||      ||||||||||    
T  25858695 aagaacaaaagatggttttacaaactaga-gactgctctatttatagtctaacattgacttgatccccaagaattaaatcgctatagtgtagtgttgcac 25858793  T
Q  177 aataaaccataggctttaggtcagaaataaactaaaacagacagc-ttgccgtagaagcaaaagcagtaaaag 248  Q
    || ||||||| |||| ||||||||||||  ||||||| || |||| ||| ||||||| ||||| ||| |||||    
T  25858794 aagaaaccatgggctctaggtcagaaat--actaaaataggcagctttgtcgtagaatcaaaatcagcaaaag 25858864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 23340643 - 23340591
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgatt 98  Q
    ||||||| |||||||||||||||||||||||||| ||||| ||||||||||||    
T  23340643 ttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatgatt 23340591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 20282114 - 20282064
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| |||||||||||||||||||||||||| ||||| ||||||||||    
T  20282114 ttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatga 20282064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 5499800 - 5499850
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| |||||||||||||||||||||||||||  ||| ||||||||||    
T  5499800 ttttattcaaagaaacaattgtcacttattattttagagaacaaaagatga 5499850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 16134218 - 16134268
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| ||||||||||||||||||||||||||  |||| ||||||||||    
T  16134218 ttttattcaaagaaacaattgtcacttattatttcaaagaacaaaagatga 16134268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 186
Target Start/End: Original strand, 24371461 - 24371607
Alignment:
Q  41 agaatttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaaacttgatggctgctctatttatagcctaacattgac 140  Q
    |||| ||||||| ||||||||||||||||||||| | || ||||| ||||||||||  ||| |   ||| | | |||||||||||||| |||| | | ||    
T  24371461 agaaattttattcaaagaaacaattgtcacttataaattccaagaacaaaagatgaaaatatatgtttgctagatgctctatttatagtctaaaactaac 24371560  T
Q  141 ttaag-ccctaagaaataaatcactaaagtgttgcacaataaaccat 186  Q
    ||||| ||| |||||||| |||| || | |||| ||||| |||||||    
T  24371561 ttaagccccaaagaaatacatcaatagaatgttccacaagaaaccat 24371607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 239
Target Start/End: Complemental strand, 24321864 - 24321666
Alignment:
Q  40 aagaatttttattaaaagaaacaattgtcacttattattttc-aagagcaaaagatgattatacaaacttgatggctgctctatttatagcctaacattg 138  Q
    ||||| ||||| | ||| ||||||||||||||||||| |||| |||| ||||||||||||  | |   |||   | |||||||||||||| |||  | |     
T  24321864 aagaacttttactcaaataaacaattgtcacttattaatttccaagaacaaaagatgattgaatatgtttgccaggtgctctatttatagtctacaact- 24321766  T
Q  139 acttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaataaactaaaacagacagcttgccgtagaagcaaaa 238  Q
    |||||| ||| || ||||| |||| || | | || ||||| ||||||| ||||||| |||||||||||| | |||||| ||||||| || ||||||||||    
T  24321765 acttaaaccccaacaaatacatcaatagaatattccacaagaaaccatgggctttacgtcagaaataaa-ttaaacaggcagcttgtcgaagaagcaaaa 24321667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 20282043 - 20281949
Alignment:
Q  117 ctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggcttt-aggtcagaaataaactaa 211  Q
    |||||||||||| |||  || ||||||| ||||||| |||| ||||||| | |||| ||||| ||||||  |||||| ||||||||||||||||||    
T  20282043 ctctatttatagtctat-atcgacttaaaccctaagcaatacatcactagaatgttccacaagaaaccaagggcttttaggtcagaaataaactaa 20281949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 21344582 - 21344676
Alignment:
Q  117 ctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggc-tttaggtcagaaataaactaa 211  Q
    |||||||||||| ||| || ||||||||||||||||||||| | ||||| | |||| ||||| |||| |  ||| ||||| |||||||||||||||    
T  21344582 ctctatttatagtcta-caatgacttaagccctaagaaatataacactagaatgttccacaagaaactacgggcttttagatcagaaataaactaa 21344676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 137 - 211
Target Start/End: Original strand, 41653725 - 41653800
Alignment:
Q  137 tgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggc-tttaggtcagaaataaactaa 211  Q
    ||||||||||||||||||||| | ||||| | |||| ||||| ||||||  | | |||||||||||||||||||||    
T  41653725 tgacttaagccctaagaaatataacactagaatgttccacaagaaaccacggacttttaggtcagaaataaactaa 41653800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 19929447 - 19929397
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| ||||||||||||||||||||||||||   ||| ||||||||||    
T  19929447 ttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 19929397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 24820626 - 24820676
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| ||||||||||||||| ||||||||||  |||| ||||||||||    
T  24820626 ttttattcaaagaaacaattgtcccttattatttcaaagaacaaaagatga 24820676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 79
Target Start/End: Complemental strand, 539259 - 539226
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattt 79  Q
    ||||||| ||||||||||||||||||||||||||    
T  539259 ttttattcaaagaaacaattgtcacttattattt 539226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 79
Target Start/End: Complemental strand, 25481445 - 25481412
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattt 79  Q
    ||||||| ||||||||||||||||||||||||||    
T  25481445 ttttattcaaagaaacaattgtcacttattattt 25481412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 79
Target Start/End: Complemental strand, 25489051 - 25489018
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattt 79  Q
    ||||||| ||||||||||||||||||||||||||    
T  25489051 ttttattcaaagaaacaattgtcacttattattt 25489018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 79
Target Start/End: Original strand, 42767399 - 42767432
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattt 79  Q
    ||||||| ||||||||||||||||||||||||||    
T  42767399 ttttattcaaagaaacaattgtcacttattattt 42767432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 24824975 - 24825061
Alignment:
Q  13 aacataaaataaaatagcaagaaaataaag---aatttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    |||||||||  ||||| ||||||| |||||   || ||||||| ||||||||||||||| ||||||||||   ||| ||||||||||    
T  24824975 aacataaaagtaaataacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcccttattatttcagagaacaaaagatga 24825061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 114; Significance: 8e-58; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 8 - 239
Target Start/End: Complemental strand, 17023336 - 17023106
Alignment:
Q  8 agaagaacataaaataaaatagcaagaaaataaaga---atttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaa 104  Q
    |||||||||||||||||| || ||||||||||||||   | ||||||| |||||||||||||||||||||||||| ||||| |||||||||  | |||||    
T  17023336 agaagaacataaaataaa-taacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatgggtttacaa 17023238  T
Q  105 acttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaat 204  Q
    ||| |||||||||||||||||||| ||||||||||||| ||||| ||||| ||||||||||||||||||||||| ||||||| |||| ||||||||||||    
T  17023237 actagatggctgctctatttatagtctaacattgacttgagccccaagaattaaatcactaaagtgttgcacaagaaaccat-ggctctaggtcagaaat 17023139  T
Q  205 aaactaaaacagacagcttgccgtagaagcaaaag 239  Q
      ||||||| || ||||||| || | |||||||||    
T  17023138 --actaaaataggcagcttgtcgaataagcaaaag 17023106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 8 - 248
Target Start/End: Complemental strand, 13069871 - 13069633
Alignment:
Q  8 agaagaacataaaataaaatagcaagaaaataaagaatttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaaact 107  Q
    |||||||||||||||||||||  || | ||  | ||| ||||||| |||||||||||||||||||||||||| ||||| |||||||||||| ||||| ||    
T  13069871 agaagaacataaaataaaataataaaataaagatgaacttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatgattttacaagct 13069772  T
Q  108 tgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaataaa 207  Q
     |||||||||||| ||||||| ||||||||||||| ||||| ||||| ||||||||||||||||||||||| ||||||| || | |||||||  |||  |    
T  13069771 agatggctgctctttttatagtctaacattgacttgagccccaagaattaaatcactaaagtgttgcacaagaaaccatgggttctaggtcatgaat--a 13069674  T
Q  208 ctaaaacagacagcttgccgtagaagcaaaagcagtaaaag 248  Q
    |||||| ||  |||||| || |||||||||||||| |||||    
T  13069673 ctaaaataggaagcttgtcgaagaagcaaaagcagcaaaag 13069633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 24 - 248
Target Start/End: Original strand, 11869838 - 11870063
Alignment:
Q  24 aaatagcaagaaaataaaga---atttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaaacttgatggctgctct 120  Q
    ||||| ||||||||||||||   | |||||||||||||||||||||||||||||||||| ||||| ||||||||||||  | |  |||| | ||| ||||    
T  11869838 aaataacaagaaaataaagatgaacttttattaaaagaaacaattgtcacttattatttccaagaacaaaagatgattcaatatgcttgctagctactct 11869937  T
Q  121 atttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaataaactaaaacagacag 220  Q
    |||||||| || |||   |||||||||| | |||||| |||| || | |||| ||||| |||| || |||||||||||||||||||||| |||||| |||    
T  11869938 atttatagtct-acaactacttaagccccaggaaatacatcaatagaatgttccacaagaaactatgggctttaggtcagaaataaact-aaacaggcag 11870035  T
Q  221 cttgccgtagaagcaaaagcagtaaaag 248  Q
    |||| |  |||||||||||||| |||||    
T  11870036 cttgtccgagaagcaaaagcagcaaaag 11870063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 110 - 248
Target Start/End: Original strand, 20225350 - 20225487
Alignment:
Q  110 atggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaataaact 209  Q
    ||||||||||||||||||| ||||||||||||| | |||||||||  |||||||||||||||||||||| ||||||| |||| ||||||||||||  |||    
T  20225350 atggctgctctatttatagtctaacattgacttgaaccctaagaatgaaatcactaaagtgttgcacaagaaaccatgggctctaggtcagaaat--act 20225447  T
Q  210 aaaacagacagc-ttgccgtagaagcaaaagcagtaaaag 248  Q
    |||| || |||| ||| || |||||||||||||| |||||    
T  20225448 aaaataggcagctttgtcgaagaagcaaaagcagcaaaag 20225487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 21 - 212
Target Start/End: Original strand, 8685846 - 8686039
Alignment:
Q  21 ataaaatagcaagaaaataaag---aatttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaaacttgatggctgc 117  Q
    |||||||| ||| |||||||||   || ||||||| |||||||||||||||||||||||||| ||||| ||||||||||||  | |   ||  | ||| |    
T  8685846 ataaaataacaataaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatgattcaatatgttttctagctac 8685945  T
Q  118 tctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaataaactaaa 212  Q
    ||||||||||| || |||   |||||||||| |||||||| |||| |||| |||| ||||| |||||| | |||||||||||||| |||||||||    
T  8685946 tctatttatagtct-acaactacttaagccccaagaaatacatcaataaaatgttccacaagaaaccacatgctttaggtcagaagtaaactaaa 8686039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 41 - 241
Target Start/End: Original strand, 41545775 - 41545973
Alignment:
Q  41 agaatttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaaacttgatggctgctctatttatagcctaacattgac 140  Q
    |||| ||||||| ||||||||| ||||||||||| |||| ||||| ||||||||||||  | |   ||| | | | |||||||||||| |||  | | ||    
T  41545775 agaacttttattcaaagaaacatttgtcacttataatttccaagaacaaaagatgattcaatatgtttgctaggtactctatttatagtctacaact-ac 41545873  T
Q  141 ttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaataaactaaaacagacagcttgccgtagaagcaaaagc 240  Q
    |||||||| |||||||| |||| |||| |||| ||||| |||||| |  |||||||||||||||||||| ||| || ||||||| || ||||||||||||    
T  41545874 ttaagccccaagaaatacatcaataaaatgttccacaagaaaccacaaactttaggtcagaaataaact-aaataggcagcttgtcggagaagcaaaagc 41545972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 8 - 211
Target Start/End: Original strand, 42244536 - 42244740
Alignment:
Q  8 agaagaacataaaataaaatagcaagaaaataaaga---atttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaa 104  Q
    |||||||||||||||||||||  |||||||||||||   | ||||||| ||| ||||||||||||||||||||||   ||| ||||||||||||          
T  42244536 agaagaacataaaataaaata--aagaaaataaagatgaacttttattcaaataaacaattgtcacttattatttcagagaacaaaagatgatttgttgt 42244633  T
Q  105 acttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggc-tttaggtcagaaa 203  Q
       || | ||| ||||||||||||  | ||| ||||||||| ||||||||||| ||||||| | |||| ||||| ||||||| ||| |||||||||| ||    
T  42244634 ggctgctagctactctatttatag-tttacaatgacttaagacctaagaaatatatcactagaatgttccacaagaaaccatgggcttttaggtcaggaa 42244732  T
Q  204 taaactaa 211  Q
    ||||||||    
T  42244733 taaactaa 42244740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 211
Target Start/End: Original strand, 11827530 - 11827605
Alignment:
Q  137 tgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggc-tttaggtcagaaataaactaa 211  Q
    |||||||| |||||||||||| ||||||| | |||| ||||||||||||  ||| |||||||||||||||||||||    
T  11827530 tgacttaaaccctaagaaatatatcactagaatgtttcacaataaaccacgggcttttaggtcagaaataaactaa 11827605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 113 - 241
Target Start/End: Complemental strand, 16703787 - 16703661
Alignment:
Q  113 gctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaataaactaaa 212  Q
    |||||||||||||||| |||  | | |||||||||| |||||||| |||| || | | || ||||| |||| || |||||||||||| ||||||||| ||    
T  16703787 gctgctctatttatagtctataact-acttaagccccaagaaatacatcaatagaattttccacaagaaactatgggctttaggtcaaaaataaact-aa 16703690  T
Q  213 acagacagcttgccgtagaagcaaaagca 241  Q
     ||| ||||||| || |||||||||||||    
T  16703689 ccaggcagcttgtcgaagaagcaaaagca 16703661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 81 - 161
Target Start/End: Complemental strand, 22038893 - 22038813
Alignment:
Q  81 caagagcaaaagatgattatacaaacttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatc 161  Q
    ||||| ||||| ||| || |||||||| |||| || |||||||||||| ||||||||||||| ||||| ||||| ||||||    
T  22038893 caagaacaaaatatggttctacaaactagatgactactctatttatagtctaacattgacttgagccccaagaattaaatc 22038813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 208
Target Start/End: Complemental strand, 8531994 - 8531791
Alignment:
Q  8 agaagaacataaaataaaatagcaagaaaataaaga---atttttattaaaagaaacaattgtcacttattat-tttc-aagagcaaaagatgattatac 102  Q
    ||||||||||||| ||||||| ||||||||||||||   | ||||||| |||||||||| ||||||||||||| |||| || |  ||||||||| |  |     
T  8531994 agaagaacataaa-taaaataacaagaaaataaagatgaacttttattcaaagaaacaaatgtcacttattatatttctaaaaataaaagatgaatgaat 8531896  T
Q  103 aaacttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaa 202  Q
    |   ||| | ||| |||||||||||| |||  | | |||||||||| |||||||| |||| || | |||| ||||| ||| ||| |||||||||||| ||    
T  8531895 atgtttgctagctactctatttatagtctataact-acttaagccccaagaaatacatcaatagaatgttccacaagaaagcatgggctttaggtcataa 8531797  T
Q  203 ataaac 208  Q
    ||||||    
T  8531796 ataaac 8531791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 2721994 - 2721944
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| |||||||||||||||||||||||||| |||||  |||||||||    
T  2721994 ttttattcaaagaaacaattgtcacttattatttccaagaataaaagatga 2721944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 6236923 - 6236871
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgatt 98  Q
    ||||||| ||||||||||||||||||||||||||   ||| ||||||||||||    
T  6236923 ttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatgatt 6236871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 137 - 211
Target Start/End: Complemental strand, 7908493 - 7908418
Alignment:
Q  137 tgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggc-tttaggtcagaaataaactaa 211  Q
    ||||||||||||||||||||| | ||||| | |||| ||||| ||||||  | | |||||||||||||||||||||    
T  7908493 tgacttaagccctaagaaatataacactagaatgttccacaagaaaccacggacttttaggtcagaaataaactaa 7908418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 137 - 211
Target Start/End: Complemental strand, 13418357 - 13418282
Alignment:
Q  137 tgacttaagccctaagaaataaatcactaaagtgttgcacaataaacca-taggctttaggtcagaaataaactaa 211  Q
    |||||||||||||| |||||| ||||||| | |||| ||||| ||||||  ||  |||||||||||||||||||||    
T  13418357 tgacttaagccctacgaaatatatcactagaatgttccacaagaaaccacgagcttttaggtcagaaataaactaa 13418282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 211
Target Start/End: Complemental strand, 17041795 - 17041630
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatg-attatacaaacttgatggctgctctatttatagcctaacattgacttaa 144  Q
    ||||||||||  ||||||||||||||||||||||  |||| ||||||||| ||| ||   | | | | ||| ||||||||||||  | ||| ||||||||    
T  17041795 ttttattaaagaaaacaattgtcacttattatttcgaagaacaaaagatgaattgtagtga-tagctagctactctatttatag-tttacaatgacttaa 17041698  T
Q  145 gccctaagaaataaatcactaaagtgttgcacaataaaccataggc-tttaggtcagaaataaactaa 211  Q
    ||||||||||||| |  | || | |||| ||||| ||||||  ||| |||||||||||||||||||||    
T  17041697 gccctaagaaatataagagtagaatgttccacaagaaaccacgggcttttaggtcagaaataaactaa 17041630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 14494843 - 14494893
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| ||||||||||||||||||||||||||   ||| ||||||||||    
T  14494843 ttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 14494893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 14660810 - 14660860
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| ||||||||||||||||||||||||||   ||| ||||||||||    
T  14660810 ttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 14660860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 14976327 - 14976377
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| ||||||||||||||||||||||||||   ||| ||||||||||    
T  14976327 ttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 14976377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 17050805 - 17050755
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||||||  ||||||||| |||||||||||| ||||| ||||||||||    
T  17050805 ttttattaaagaaaacaattgccacttattatttccaagaacaaaagatga 17050755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 96
Target Start/End: Original strand, 34053638 - 34053680
Alignment:
Q  54 aaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    |||||||||||||||||||||||||| ||||| || |||||||    
T  34053638 aaagaaacaattgtcacttattatttccaagaacagaagatga 34053680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 43842094 - 43842144
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| |||||||||||||||||||||||||| | ||| ||||| ||||    
T  43842094 ttttattcaaagaaacaattgtcacttattatttccgagaacaaaaaatga 43842144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 42 - 253
Target Start/End: Complemental strand, 49957 - 49747
Alignment:
Q  42 gaatttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaaacttgatggctgctctatttatagcctaacattgact 141  Q
    ||||||||| | |||| ||||||||||||||||||||| ||||| ||||||||| || ||| |||| |||| ||||||||||||||| ||||||||||||    
T  49957 gaatttttactcaaaggaacaattgtcacttattatttccaagaacaaaagatggttttactaactagatgactgctctatttatagtctaacattgact 49858  T
Q  142 taagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaataaactaaaacagacagct-tgccgtagaagcaaaagc 240  Q
    | | ||| ||||| ||||||||||||||||||||||| ||||||| |||| ||||||||||||  ||||||| || ||||| || || ||||||||||||    
T  49857 tgaaccccaagaattaaatcactaaagtgttgcacaagaaaccatgggctctaggtcagaaat--actaaaataggcagctatgtcgaagaagcaaaagc 49760  T
Q  241 agtaaaagagcaa 253  Q
    || ||||| ||||    
T  49759 agcaaaagggcaa 49747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 46 - 205
Target Start/End: Original strand, 8883 - 9041
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaaacttgatggctgctctatttatagcctaacattgacttaag 145  Q
    ||||||| |||||||||||||||||||||||||| || || ||||||||| || ||||| || |||||||||||||||||||| ||||||||||||| ||    
T  8883 ttttattcaaagaaacaattgtcacttattatttccacgaacaaaagatggttttacaa-ctagatggctgctctatttatagtctaacattgacttgag 8981  T
Q  146 ccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaata 205  Q
    ||| ||||| |||||||||||| |||||||||| ||||||| |||| |||||||||||||    
T  8982 cccaaagaattaaatcactaaattgttgcacaagaaaccatgggctctaggtcagaaata 9041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 46 - 240
Target Start/End: Complemental strand, 21711 - 21518
Alignment:
Q  46 ttttattaaaagaaa-caattgtcacttattattttcaa-gagcaaaagatgattatacaaacttgatggctgctctatttatagcctaacattgactta 143  Q
    ||||||||||||||| ||||||||||| ||||  ||||| || |||||||||||| ||||| || ||||||||||| |||||||| |||||||||||||     
T  21711 ttttattaaaagaaaacaattgtcact-attaaattcaaagaacaaaagatgattttacaagctagatggctgctcaatttatagtctaacattgacttg 21613  T
Q  144 agccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaataaactaaaacagacagcttgccgtagaagcaaaagc 240  Q
    ||||||||||||||||||||||||||||||||||| ||||||| || | ||||||||||||  ||||||| || ||||||| |  ||||||||||||    
T  21612 agccctaagaaataaatcactaaagtgttgcacaagaaaccatgggttctaggtcagaaat--actaaaataggcagcttgtccaagaagcaaaagc 21518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0713 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0713
Description:

Target: scaffold0713; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 58 - 248
Target Start/End: Original strand, 6738 - 6928
Alignment:
Q  58 aaacaattgtcacttattattttcaagagcaaaagatgattatacaaacttgatggctgctctatttatagcctaacatt--gacttaagccctaagaaa 155  Q
    |||||||||||||||||||||| ||||| ||||||||| || |||||||| |||| ||| ||||||||||| ||||||||  ||||| ||||| |||||     
T  6738 aaacaattgtcacttattattt-caagaacaaaagatggttttacaaactagatgactgatctatttatagtctaacattttgacttcagccccaagaat 6836  T
Q  156 taaatcactaaagtgttgcacaataaaccataggctttaggtcagaaataaactaaaacagacagc-ttgccgtagaagcaaaagcagtaaaag 248  Q
    ||||| ||||||||||||||||| |||||||||||| |||||| |||||  ||||||| || |||| ||| || |||||||||||||| |||||    
T  6837 taaattactaaagtgttgcacaagaaaccataggctctaggtctgaaat--actaaaataggcagctttgtcgaagaagcaaaagcagcaaaag 6928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0855 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0855
Description:

Target: scaffold0855; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 202
Target Start/End: Complemental strand, 3566 - 3371
Alignment:
Q  10 aagaacataaaataaaatagcaagaaaataaaga--atttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaaact 107  Q
    ||||||||||||  ||||| ||| ||||||||||  | |||||||  |||||||||||||||||||| |||| ||||| ||||||||||  ||| |   |    
T  3566 aagaacataaaagtaaataacaataaaataaagagaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtt 3467  T
Q  108 tgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccat-aggctttaggtcagaa 202  Q
    || | ||||||||||||||||||||| | | ||||||||||||||||||| |||| || | |||| ||||| ||||||| ||  ||||||||||||    
T  3466 tgctagctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaaccatgagcttttaggtcagaa 3371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0847 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0847
Description:

Target: scaffold0847; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 202
Target Start/End: Complemental strand, 3731 - 3536
Alignment:
Q  10 aagaacataaaataaaatagcaagaaaataaaga--atttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaaact 107  Q
    ||||||||||||  ||||| ||| ||||||||||  | |||||||  |||||||||||||||||||| |||| ||||| ||||||||||  ||| |   |    
T  3731 aagaacataaaagtaaataacaataaaataaagagaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtt 3632  T
Q  108 tgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccat-aggctttaggtcagaa 202  Q
    || | ||||||||||||||||||||| | | ||||||||||||||||||| |||| || | |||| ||||| ||||||| ||  ||||||||||||    
T  3631 tgctagctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaaccatgagcttttaggtcagaa 3536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 81 - 205
Target Start/End: Original strand, 22463 - 22587
Alignment:
Q  81 caagagcaaaagatgattatacaaacttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaata 180  Q
    ||||| ||||||||| || |||||||| ||||| |||||||||||||| ||||||||||||| | ||| ||||| || |||||||||||||||||||| |    
T  22463 caagaacaaaagatggttttacaaactagatggttgctctatttatagtctaacattgacttgaaccccaagaattatatcactaaagtgttgcacaaga 22562  T
Q  181 aaccataggctttaggtcagaaata 205  Q
    || ||| | || |||||||||||||    
T  22563 aatcatggactctaggtcagaaata 22587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 25 - 154
Target Start/End: Complemental strand, 38578 - 38447
Alignment:
Q  25 aatagcaagaaaataaaga--atttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaaacttgatggctgctctat 122  Q
    |||| ||||||||||||||  | ||||||| ||||||||||||||||||||| |||| ||||| |||||||||| || | ||   ||||||||||||||     
T  38578 aataacaagaaaataaagagaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgaatagataagtctgatggctgctctac 38479  T
Q  123 ttatagcctaacattgacttaagccctaagaa 154  Q
    | |||| |||| ||||||||||||||||||||    
T  38478 taatagtctaatattgacttaagccctaagaa 38447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 8 - 213
Target Start/End: Complemental strand, 168295 - 168088
Alignment:
Q  8 agaagaacataaaataaaatagcaagaaaataaagaatt-tttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaaac 106  Q
    ||||||||||||||  ||||| |||||||||||||||   |||||| ||||||| ||||||||||||  |||| ||||| ||||||||||||| | |       
T  168295 agaagaacataaaagtaaataacaagaaaataaagaagaatttatttaaagaaataattgtcacttagaatttccaagaacaaaagatgattagatatgt 168196  T
Q  107 ttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaac-cataggc-tttaggtcagaaat 204  Q
     || | |||||||| |||||||||||| | | |||||||||| |||||||| |||| || | |||| ||||| |||| ||| ||| ||||||||||||||    
T  168195 ctgctagctgctct-tttatagcctaaaactaacttaagcccaaagaaatacatcaatagaatgttccacaagaaactcatgggcttttaggtcagaaat 168097  T
Q  205 aaactaaaa 213  Q
    |||||||||    
T  168096 aaactaaaa 168088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1559 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1559
Description:

Target: scaffold1559; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 211
Target Start/End: Complemental strand, 1502 - 1299
Alignment:
Q  10 aagaacataaaataaaatagcaagaaaataaaga---atttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattatacaaac 106  Q
    |||||||| |||  ||||| |||||||||| |||   | ||||||| ||||||||| |||||||||||||||| ||||| ||||||||||||  | | |     
T  1502 aagaacatgaaagtaaataacaagaaaatagagatgaacttttattcaaagaaacagttgtcacttattatttccaagaacaaaagatgattcaatatat 1403  T
Q  107 ttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggctttaggtcagaaataa 206  Q
    ||| | |||||| |||||||| ||||  | | ||||||||| | ||||||| |||| || | |||| ||||| |||   | |||||||||||| ||||||    
T  1402 ttgctagctgctttatttataacctataact-acttaagccttgagaaatatatcaatagaatgttccacaagaaattgtgggctttaggtcaaaaataa 1304  T
Q  207 actaa 211  Q
    |||||    
T  1303 actaa 1299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 211
Target Start/End: Complemental strand, 172838 - 172633
Alignment:
Q  7 gagaagaacataaaataaaatagcaagaaaataaagaatttttattaaaag-aaacaattgtcacttattattttcaagagcaaaagatg-attatacaa 104  Q
    ||||| |||||||||||||||| ||||||| ||||||| ||||||||| || ||||||||||||||  | | || ||||| ||||||||| ||| |        
T  172838 gagaataacataaaataaaataacaagaaagtaaagaacttttattaagagaaaacaattgtcactattgaattccaagaacaaaagatgaattgttgtg 172739  T
Q  105 acttgatggctgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaataaaccataggc-tttaggtcagaaa 203  Q
    | ||| | ||| ||||||||||||  | ||| |||||||||||| |||||||| ||||||| | |||| || || ||||||  ||| ||||||||| |||    
T  172738 a-ttgctagctactctatttatag-tttacaatgacttaagccccaagaaatatatcactagaatgttccagaagaaaccacgggcttttaggtcataaa 172641  T
Q  204 taaactaa 211  Q
    ||||||||    
T  172640 taaactaa 172633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 163942 - 163997
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattata 101  Q
    ||||||| ||||||||||||||||||||||||||   ||| |||||||||| ||||    
T  163942 ttttattcaaagaaacaattgtcacttattatttcacagaacaaaagatgaatata 163997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 23327 - 23277
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| |||||||||||||||||||||||||| ||||| ||||||||||    
T  23327 ttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatga 23277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 249 - 199
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| |||||||||||||||||||| ||||| ||||| ||||||||||    
T  249 ttttattcaaagaaacaattgtcacttaatatttccaagaacaaaagatga 199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 100
Target Start/End: Complemental strand, 100432 - 100378
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattat 100  Q
    ||||||| |||||||||||| |||||||||||||   ||| ||||||||||||||    
T  100432 ttttattcaaagaaacaattatcacttattatttcagagaacaaaagatgattat 100378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1323 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold1323
Description:

Target: scaffold1323; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 1897 - 1983
Alignment:
Q  13 aacataaaataaaatagcaagaaaataaag---aatttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    |||||||||  ||||| ||||||| |||||   || ||||||| |||||||||||||||||||||||||| | ||| ||||||||||    
T  1897 aacataaaagtaaataacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttccgagaacaaaagatga 1983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1208 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1208
Description:

Target: scaffold1208; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 1972 - 2022
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| |||||||||||||||||||||||||| | ||| ||||||||||    
T  1972 ttttattcaaagaaacaattgtcacttattatttccgagaacaaaagatga 2022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 6481 - 6431
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| |||||||||||||||||||||||||| | ||| ||||||||||    
T  6481 ttttattcaaagaaacaattgtcacttattatttccgagaacaaaagatga 6431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 11095 - 11045
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| |||||||||||||||||||||||||| | ||| ||||||||||    
T  11095 ttttattcaaagaaacaattgtcacttattatttccgagaacaaaagatga 11045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 9090 - 9040
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| |||||||||||||||||||||||||| | ||| ||||||||||    
T  9090 ttttattcaaagaaacaattgtcacttattatttccgagaacaaaagatga 9040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 100
Target Start/End: Complemental strand, 27432 - 27378
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattat 100  Q
    ||||||| ||||||||||||||||||||||||||   ||| ||||||||||||||    
T  27432 ttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatgattat 27378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 100
Target Start/End: Complemental strand, 39428 - 39374
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatgattat 100  Q
    ||||||| ||||||||||||||||||||||||||   ||| ||||||||||||||    
T  39428 ttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatgattat 39374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 2571 - 2521
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| |||||||||||||||||||||||||| | ||| ||||||||||    
T  2571 ttttattcaaagaaacaattgtcacttattatttccgagaacaaaagatga 2521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 91
Target Start/End: Original strand, 9240 - 9285
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaa 91  Q
    ||||||| |||||||||||||||||||||||||| ||||| |||||    
T  9240 ttttattcaaagaaacaattgtcacttattatttccaagaacaaaa 9285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 8853 - 8925
Alignment:
Q  8 agaagaacataaaataaaatagcaagaaaataaaga---atttttattaaaagaaacaattgtcacttattattt 79  Q
    |||| ||||||||||||||||  || ||||||||||   | ||||||| ||||||||||||||||||||||||||    
T  8853 agaataacataaaataaaata--aataaaataaagatgaacttttattcaaagaaacaattgtcacttattattt 8925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 61910 - 61874
Alignment:
Q  43 aatttttattaaaagaaacaattgtcacttattattt 79  Q
    |||||||||| ||||||||||||||||||||||||||    
T  61910 aatttttattcaaagaaacaattgtcacttattattt 61874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 9117 - 9167
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| ||||||||||||||||||||||||||   ||| ||||||||||    
T  9117 ttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 9167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 17672 - 17722
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| |||||||||||||||||||||||||| | ||| | ||||||||    
T  17672 ttttattcaaagaaacaattgtcacttattatttccgagaaccaaagatga 17722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 21726 - 21776
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| ||||||||||||||||||||||||||   ||| ||||||||||    
T  21726 ttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 21776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 26873 - 26923
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| ||||||||||||||||||||||||||   ||| ||||||||||    
T  26873 ttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 26923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 48853 - 48803
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| ||||||||||||||||||||||||||   ||| ||||||||||    
T  48853 ttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 48803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 18792 - 18842
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattttcaagagcaaaagatga 96  Q
    ||||||| ||||||||||||||| ||||||||||  |||| ||||||||||    
T  18792 ttttattcaaagaaacaattgtcccttattatttcaaagaacaaaagatga 18842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0916 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0916
Description:

Target: scaffold0916; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 211
Target Start/End: Complemental strand, 3573 - 3409
Alignment:
Q  48 ttattaaaagaaacaattgtcacttattattttcaagagcaaaagatg-attatacaaacttgatggctgctctatttatagcctaacattgacttaagc 146  Q
    ||||| ||||| |||||||||||||||||||| |||||  |||||||| ||  |||  | | | | ||| |||||||||||| |||| || |||||||      
T  3573 ttattcaaagagacaattgtcacttattatttccaagaagaaaagatgaatgttactga-tagctagctactctatttatagtctaatatcgacttaaaa 3475  T
Q  147 cctaagaaataaatcactaaagtgttgcacaataaaccataggc-tttaggtcagaaataaactaa 211  Q
    |||||| |||| ||||||| | |||| || || ||||||   || |||||||||||||||||||||    
T  3474 cctaagcaatacatcactagaatgttccaaaagaaaccaagcgcttttaggtcagaaataaactaa 3409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 79
Target Start/End: Original strand, 9836 - 9869
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattt 79  Q
    ||||||| ||||||||||||||||||||||||||    
T  9836 ttttattcaaagaaacaattgtcacttattattt 9869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 79
Target Start/End: Original strand, 18971 - 19004
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattt 79  Q
    ||||||| ||||||||||||||||||||||||||    
T  18971 ttttattcaaagaaacaattgtcacttattattt 19004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 79
Target Start/End: Complemental strand, 48457 - 48424
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattt 79  Q
    ||||||| ||||||||||||||||||||||||||    
T  48457 ttttattcaaagaaacaattgtcacttattattt 48424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 79
Target Start/End: Complemental strand, 34017 - 33984
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattt 79  Q
    ||||||| ||||||||||||||||||||||||||    
T  34017 ttttattcaaagaaacaattgtcacttattattt 33984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 79
Target Start/End: Original strand, 425054 - 425087
Alignment:
Q  46 ttttattaaaagaaacaattgtcacttattattt 79  Q
    ||||||| ||||||||||||||||||||||||||    
T  425054 ttttattcaaagaaacaattgtcacttattattt 425087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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