View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7425_low_16 (Length: 286)
Name: NF7425_low_16
Description: NF7425
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7425_low_16 |
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Alignment Details
Target: chr2 (Bit Score: 255; Significance: 1e-142; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 271
Target Start/End: Original strand, 10035425 - 10035694
Alignment:
| Q |
1 |
attctaaacatctagctaaacacttacaaaaaataaccttgatactaacaagtcccgtgatcgatgtttttattacgacgatagaattgtgcacttgcag |
100 |
Q |
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| T |
10035425 |
attctaaacatctagctaaacacttacaaaaaataaccttgatactaacaagtcccgtgatcgatgtttttattacgacgatagaattgtgcacttgcag |
10035524 |
T |
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| Q |
101 |
ccttatcaatcatggagcaacatgaaatcttgtatttattgtgtttggattttagattccagaagtgtatttttctaaatttacacatccaaattttaga |
200 |
Q |
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| T |
10035525 |
ccttatcaatcatggaacaacatgaaatcttgtatttattgtgtttggattttagattccagaagtgtatttttctaaatttacacgtccaaattttaga |
10035624 |
T |
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| Q |
201 |
tttaggatgtgttaaataccagattttgaataggaacacaaacatttaattgatgcattcaacatgtttat |
271 |
Q |
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| T |
10035625 |
tttaggatgtgttaaataccagattttgaataggaacacaaa-atttaattgatgcattcaacatgtttat |
10035694 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 271
Target Start/End: Original strand, 10095793 - 10096062
Alignment:
| Q |
1 |
attctaaacatctagctaaacacttacaaaaaataaccttgatactaacaagtcccgtgatcgatgtttttattacgacgatagaattgtgcacttgcag |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |
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| T |
10095793 |
attctaaacatctagctaaacacttacaaaaaataaccttgatactaacaagtcccatgatcgatgtttttattatgacgatagaattgtgcacttgcag |
10095892 |
T |
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| Q |
101 |
ccttatcaatcatggagcaacatgaaatcttgtatttattgtgtttggattttagattccagaagtgtatttttctaaatttacacatccaaattttaga |
200 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10095893 |
ccttatcaatcatggaacaacatgaaatcttgtatttattgtgtttggattttagattccagaagtgtatttttctaaatttacacatccaaattttaga |
10095992 |
T |
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| Q |
201 |
tttaggatgtgttaaataccagattttgaataggaacacaaacatttaattgatgcattcaacatgtttat |
271 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
10095993 |
tttaggatgtgttaaataccagattttgaataggaacacaaa-atttaattgatgcattcaacatgtttat |
10096062 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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