View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7427_low_24 (Length: 288)
Name: NF7427_low_24
Description: NF7427
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7427_low_24 |
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Alignment Details
Target: chr7 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 40465506 - 40465235
Alignment:
| Q |
1 |
tgaaaatttcgaatatgttgtttaatggggtcataacatgcttcaaaatataggtttatatagatgttaatatcgagtggtcttttgtggtgttatctta |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
40465506 |
tgaaaatttcgaatatgttgtttaatggggtcataacatgcttcaaaatataggtttatatagatgttaatatcgggtggtcttttgtggtgttatctta |
40465407 |
T |
|
| Q |
101 |
tctcagctcataggatatggatagttccgaagnnnnnnnnnncttgtagaattttgttctacgttttggtgttcaaaactgctcctatttctattcagag |
200 |
Q |
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||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
40465406 |
tctcagctcataggatatggatagttccgga-aaaaaaaaaccttgtagaattttgttctacgttttggtgttcaaaactgctcctatttctatttagag |
40465308 |
T |
|
| Q |
201 |
ctaaggtggtatttcctctttttctatagatatttattgaagagcaannnnnnngattcataattgatgattc |
273 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |
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| T |
40465307 |
ctaaggtggtatttcctctttttctataaatatttattgaagagcaatttttttgattcataattgatgattc |
40465235 |
T |
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