View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7427_low_6 (Length: 456)
Name: NF7427_low_6
Description: NF7427
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7427_low_6 |
 | |
|
| [»] scaffold0074 (1 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 312; Significance: 1e-176; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 312; E-Value: 1e-176
Query Start/End: Original strand, 37 - 440
Target Start/End: Original strand, 8139964 - 8140366
Alignment:
| Q |
37 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
136 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||| |||||||||| | ||||||||||||||||| |
|
|
| T |
8139964 |
tgttgggtaccagagtaacaaaatattatcacacagctaaaataagagatgagaaaagagaaactgaacgcacaatattt-atgtggaaacccctcaaca |
8140062 |
T |
|
| Q |
137 |
aataaggggagaaaaccatggggcaagatcagagaactttcactaagtggaagaaattataagatctctctctaaatacaaggagagacaaattaccctc |
236 |
Q |
| |
|
||||||||||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |
|
|
| T |
8140063 |
aataaggggagaaaaccatggggtaagattagaaaactttcactcagtggaagaaattataagacctctctcttaatacaaggagagacaaattaccctc |
8140162 |
T |
|
| Q |
237 |
tctcttgaaataggagaatactattactaggagacacctcacataagaaactatattttctctatattttttctgagtctcaacaagctctaattcttct |
336 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
8140163 |
tctcttgaaataggagaatactattactaggagacacatcacagaagaaactatattttctctatatttttcctgagtctcaacaagctctaattcttct |
8140262 |
T |
|
| Q |
337 |
tgttgtgttactacttgatgagatgggatgagatgatgaaatcatgcaaatgagcttttctatttataggagaggtaagccatagttctttacatgcaac |
436 |
Q |
| |
|
|||||||||||||||||||| |||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
8140263 |
tgttgtgttactacttgatgggatggggtgagatgattaaatcatgcaaataagcttttctatttataggagaggtaagtcatagttccttacatgcaac |
8140362 |
T |
|
| Q |
437 |
aatc |
440 |
Q |
| |
|
|||| |
|
|
| T |
8140363 |
aatc |
8140366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 42 - 438
Target Start/End: Original strand, 16183636 - 16184038
Alignment:
| Q |
42 |
ggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataa |
141 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16183636 |
ggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataa |
16183735 |
T |
|
| Q |
142 |
ggggagaaaaccatggggcaagatcagagaactttcactaagtggaaga-aattataagatctctctctaaatacaaggagagacaaattaccctctctc |
240 |
Q |
| |
|
||||| ||||||| ||||||||| |||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16183736 |
ggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagacaattacaagacctctctctaaatacaaggagagacaaattaccctctctc |
16183835 |
T |
|
| Q |
241 |
ttgaaataggagaatactattactaggagacacctcacataagaaactatattt--tctctatattttt--tctgagtctcaacaagctctaattcttct |
336 |
Q |
| |
|
||||||||||||||||||| ||||||||| |||||||| ||||||||||||| ||||||||||||| ||| | ||||||||||||||||||||| | |
|
|
| T |
16183836 |
ttgaaataggagaatactaacactaggagaaacctcacaggagaaactatatttcctctctatatttttcctctcactctcaacaagctctaattcttgt |
16183935 |
T |
|
| Q |
337 |
tgttgtgttactacttgatgagatgggatgaga--tgatgaaatcatgcaaatgagcttttctatttataggagaggtaagccatagttctttacatgca |
434 |
Q |
| |
|
|||||||||||||||||||| |||| ||||||| || || || ||||||||| | || ||||||||||||| |||||||| |||||| ||||||||| |
|
|
| T |
16183936 |
tgttgtgttactacttgatgtgatgagatgagatgtgttgggattgtgcaaatgaac-ttgctatttataggagtggtaagccttagttccttacatgca |
16184034 |
T |
|
| Q |
435 |
acaa |
438 |
Q |
| |
|
|||| |
|
|
| T |
16184035 |
acaa |
16184038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 37 - 275
Target Start/End: Original strand, 8138460 - 8138697
Alignment:
| Q |
37 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
136 |
Q |
| |
|
|||| |||| ||||||| |||| |||||||||||||||||||||||||||||||||||| |||| |||||||| || || | |||||||||||| |||| |
|
|
| T |
8138460 |
tgttgggtagcagagtatcaaagtattatcacgcagctaaaataagagacgagaaaagaaaaacttaacacacagtaatt-atgtggaaaccccttaaca |
8138558 |
T |
|
| Q |
137 |
aataaggggagaaaaccatggggcaagatcagagaactttcactaagtggaagaaattataagatctctctctaaatacaaggagagacaaattaccctc |
236 |
Q |
| |
|
|| ||||||||||||||| | |||||||| |||||||||||||||| |||||||||||| |||| ||| ||||||||||||||||||||||||||| ||| |
|
|
| T |
8138559 |
aacaaggggagaaaaccacgaggcaagattagagaactttcactaaatggaagaaattacaagacctccctctaaatacaaggagagacaaattactctc |
8138658 |
T |
|
| Q |
237 |
tctcttgaaataggagaatactattactaggagacacct |
275 |
Q |
| |
|
||||||||| |||||||||||||| |||||||||||||| |
|
|
| T |
8138659 |
tctcttgaagtaggagaatactatcactaggagacacct |
8138697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 37 - 208
Target Start/End: Complemental strand, 30235339 - 30235168
Alignment:
| Q |
37 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
136 |
Q |
| |
|
|||| |||||||||||| ||||||||||| || |||||||||||| | | ||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
30235339 |
tgttgggtaccagagtagcaaaatattattacacagctaaaataaaaaatgagaaaagaggaactgaacacacaata-tttacgtggaaacccctcaacg |
30235241 |
T |
|
| Q |
137 |
aataagggg-agaaaaccatggggcaagatcagagaactttcactaagtggaagaaattataagatctctctc |
208 |
Q |
| |
|
||||||||| | ||||||| ||| |||| ||| |||||||| ||| | |||||||||| | || ||||||| |
|
|
| T |
30235240 |
aataaggggaaaaaaaccacgggataagagtagaaaactttcaataactagaagaaattacaggacctctctc |
30235168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 50 - 360
Target Start/End: Original strand, 5102606 - 5102911
Alignment:
| Q |
50 |
agtaacaaaatattatcacgcagctaaaataagagacgag-aaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaga |
148 |
Q |
| |
|
||||||||||||||||||| || ||||||||| ||| ||| |||||||| ||| || ||| |||| ||||| | |||| ||||||||||||||||||| | |
|
|
| T |
5102606 |
agtaacaaaatattatcactcaactaaaataaaagatgagaaaaagagggactaaatacataata-tttacat-gaaaaccctcaacaaataagggga-a |
5102702 |
T |
|
| Q |
149 |
aaaccatggggcaagatcagagaactttcactaagtggaagaaattataagatctctctctaaatacaaggagagacaaattaccctctctcttgaaata |
248 |
Q |
| |
|
||||||||| |||||| ||| |||||| ||||||||| |||||||||||| || || ||| |||||||||||| ||| |||||||||||| |
|
|
| T |
5102703 |
aaaccatggagcaagagtagataacttttactaagtgggagaaattataagtcct--------atccaaaaagagacaaattatcctatctcttgaaata |
5102794 |
T |
|
| Q |
249 |
ggagaatactatt-----actaggagacacctcacataagaaactatattttctctatattttttctgagtctcaacaagctctaattcttcttgttgtg |
343 |
Q |
| |
|
|||||||| || | | || |||| |||| || |||||||||||||| |||| ||| |||||| | |||| | | |||||||| || |||||||| |
|
|
| T |
5102795 |
ggagaataatacttatacaataagagataccttacgaaagaaactatatttcctctttatattttctcactctctagagactctaattattgttgttgtg |
5102894 |
T |
|
| Q |
344 |
ttactacttgatgagat |
360 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
5102895 |
ttactacttgatgagat |
5102911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 37 - 143
Target Start/End: Original strand, 36528415 - 36528520
Alignment:
| Q |
37 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
136 |
Q |
| |
|
|||| |||| |||||||||||| || || ||||| ||||||||||||| ||||| ||||||| ||||||||||||| |||||||||||||||||| || |
|
|
| T |
36528415 |
tgttgggtatcagagtaacaaagtaaaattacgcaactaaaataagagatgagaatagaggaattgaacacacaata-tttacgtggaaacccctccacg |
36528513 |
T |
|
| Q |
137 |
aataagg |
143 |
Q |
| |
|
||||||| |
|
|
| T |
36528514 |
aataagg |
36528520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 438
Target Start/End: Original strand, 2323547 - 2323700
Alignment:
| Q |
295 |
tctctatattttt--tctgagtctcaacaagctctaattcttcttgttgtgttactacttgatgagatgggatgagatg----------atgaaatcatg |
382 |
Q |
| |
|
||||||||||||| ||| | ||||||||||||||||| ||| ||||||||||||||||||||| |||| ||||||||| ||||||| || |
|
|
| T |
2323547 |
tctctatatttttcctctcactctcaacaagctctaat-cttattgttgtgttactacttgatgggatgagatgagatgtgatgggataatgaaattgtg |
2323645 |
T |
|
| Q |
383 |
caaatgagcttttctatttataggagaggtaagccatagttctttacatgcaacaa |
438 |
Q |
| |
|
|||||||||| | |||||||| |||||||||| | |||||| ||||||||||||| |
|
|
| T |
2323646 |
aaaatgagcttgt-tatttataagagaggtaagtcttagttccttacatgcaacaa |
2323700 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0074 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: scaffold0074
Description:
Target: scaffold0074; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 36 - 438
Target Start/End: Original strand, 27225 - 27626
Alignment:
| Q |
36 |
gtgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaac |
135 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
27225 |
gtgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagagaaactgaacacacaatactttacgtggaaacccctcaac |
27324 |
T |
|
| Q |
136 |
aaataaggggagaaaaccatggggcaagatcagagaactttcactaagtggaaga-aattataagatctctctctaaatacaaggagagacaaattaccc |
234 |
Q |
| |
|
||||||||||| ||||||| ||||||||| |||||||||||||||||||||||| ||||| || | ||||||||||||||||||||||||||||||| |
|
|
| T |
27325 |
aaataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagacaattacaatacttctctctaaatacaaggagagacaaattacca |
27424 |
T |
|
| Q |
235 |
tctctcttgaaataggagaatactattactaggagacacctcacataagaaactatattt--tctctatattttt--tctgagtctcaacaagctctaat |
330 |
Q |
| |
|
|||||||||||||||| |||||||| ||||||||| |||||||| ||||||||||||| ||||||||||||| ||| | ||||||||||||||||| |
|
|
| T |
27425 |
tctctcttgaaataggtgaatactaacactaggagaaacctcacaggagaaactatatttcctctctatatttttcctctcactctcaacaagctctaat |
27524 |
T |
|
| Q |
331 |
tcttcttgttgtgttactacttgatgagatgggatgagatgatgaaatcatgcaaatgagcttttctatttataggagaggtaagccatagttctttaca |
430 |
Q |
| |
|
|||| |||||||||||||| |||||| |||| ||||||||| || ||||||||| | || |||||||||||||||||||||| |||||| ||||| |
|
|
| T |
27525 |
tcttgttgttgtgttactatttgatgtgatgagatgagatg-----attgtgcaaatgaac-ttgctatttataggagaggtaagccttagttccttaca |
27618 |
T |
|
| Q |
431 |
tgcaacaa |
438 |
Q |
| |
|
|||||||| |
|
|
| T |
27619 |
tgcaacaa |
27626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 231; Significance: 1e-127; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 35 - 438
Target Start/End: Complemental strand, 46191548 - 46191141
Alignment:
| Q |
35 |
tgtgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaa |
134 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
46191548 |
tgtgttaggaaccagagtaacaaaatattatcatgcagctaaaataagagacgagaaaagaggaactgaacaca--atattttacgtggaaacccctcaa |
46191451 |
T |
|
| Q |
135 |
caaataaggggagaaaaccatggggcaagatcagagaactttcactaagtggaaga-aattataagatctctctctaaatacaaggagagacaaattacc |
233 |
Q |
| |
|
|||||||||||| ||||||| ||| ||||| |||||||||||||||||||||||| ||||| |||| |||||||||||| |||||||||||||||||| |
|
|
| T |
46191450 |
caaataaggggaaaaaaccacgggacaagagtagagaactttcactaagtggaagacaattacaagacttctctctaaatagaaggagagacaaattacc |
46191351 |
T |
|
| Q |
234 |
ctctctcttgaaataggagaatactattactaggagacacctcacataagaaactatattt--tctctatattttt--tctgagtctcaacaagctctaa |
329 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||| ||||||||||||| ||| | |||||||||||||||| |
|
|
| T |
46191350 |
ctctctcttgaaataggagaatactaacactaggagaaacctcacaggagaaactatatttcctctctatatttttcctctcactctcaacaagctctaa |
46191251 |
T |
|
| Q |
330 |
ttcttcttgttgtgttactacttgatgagatgggatgagatg--atgaaatcatgcaaatgagcttttctatttataggagaggtaagccatagttcttt |
427 |
Q |
| |
|
||||| |||||||||||||||||||| |||| ||||||||| ||| || ||||||||| ||| |||||||||||||||||||||| |||||| || |
|
|
| T |
46191250 |
ttcttgttgttgtgttactacttgattggatgagatgagatgtgatgggattgtgcaaatgaacttg-ctatttataggagaggtaagccttagttcctt |
46191152 |
T |
|
| Q |
428 |
acatgcaacaa |
438 |
Q |
| |
|
||||||||||| |
|
|
| T |
46191151 |
acatgcaacaa |
46191141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 37 - 365
Target Start/End: Complemental strand, 4130401 - 4130083
Alignment:
| Q |
37 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
136 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| | |||||||||||| ||||||||| |
|
|
| T |
4130401 |
tgttaggtacttgagtaacaaaatattatcacgcaactaaaataagtgacgagaaaagaggaactgaacacacaa-aatttacgtggaaatccctcaaca |
4130303 |
T |
|
| Q |
137 |
aataaggggagaaaaccatggggcaagatcagagaactttcactaagtggaaga-aattataagatctctctctaaatacaaggagagacaaattaccct |
235 |
Q |
| |
|
||||| |||| ||||||| ||||||||| |||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
4130302 |
aataaagggaaaaaaccacggggcaagagtagagaactttcactaagtggaagataattacaagacttctctctaaatacaaggagagacaaattaccct |
4130203 |
T |
|
| Q |
236 |
ctctcttgaaataggagaatactattactaggagacacctcacataagaaactatattt--tctctatattttt--tctgagtctcaacaagctctaatt |
331 |
Q |
| |
|
|||||||||||||||| ||||||| |||||| ||||||||||||| ||||||||||||| ||| | |||||||||||||||||| |
|
|
| T |
4130202 |
ctctcttgaaataggacaatactaacactagg--------------agaaactatatttcctctctatatttttcctctcactctcaacaagctctaatt |
4130117 |
T |
|
| Q |
332 |
cttcttgttgtgttactacttgatgagatgggat |
365 |
Q |
| |
|
||| ||||||||||||||||||||| |||||||| |
|
|
| T |
4130116 |
cttgttgttgtgttactacttgatgtgatgggat |
4130083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 42 - 231
Target Start/End: Original strand, 30697120 - 30697308
Alignment:
| Q |
42 |
ggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataa |
141 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||| |
|
|
| T |
30697120 |
ggtactagagtaacaaaatattatcacgcagctaacataagagacgagaaaagaggaacttaacacaaaatattt-acgtggaaacccctcaacaaataa |
30697218 |
T |
|
| Q |
142 |
ggggagaaaaccatggggcaagatcagagaactttcactaagtggaagaaattataagatctctctctaaatacaaggagagacaaatta |
231 |
Q |
| |
|
||||| ||| ||| | ||||||| ||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||| |
|
|
| T |
30697219 |
ggggaaaaagccacgtggcaagagtagagaactttcactaagtggaagaaattacaagacctctttctaaatacaaggagagacaaatta |
30697308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 179 - 258
Target Start/End: Original strand, 30674787 - 30674866
Alignment:
| Q |
179 |
ctaagtggaagaaattataagatctctctctaaatacaaggagagacaaattaccctctctcttgaaataggagaatact |
258 |
Q |
| |
|
||||||||||||||||||| | ||||| ||||| | ||||||||| |||||| ||||||||| |||||||||||||| |
|
|
| T |
30674787 |
ctaagtggaagaaattatacaacctctcactaaaaataaggagagaacaattacattctctcttgtaataggagaatact |
30674866 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 438
Target Start/End: Complemental strand, 4130066 - 4130024
Alignment:
| Q |
396 |
ctatttataggagaggtaagccatagttctttacatgcaacaa |
438 |
Q |
| |
|
|||||||||||||||||||||| || ||| ||||||||||||| |
|
|
| T |
4130066 |
ctatttataggagaggtaagccttaattccttacatgcaacaa |
4130024 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 364518 - 364466
Alignment:
| Q |
309 |
ctgagtctcaacaagctctaattcttcttgttgtgttactacttgatgagatg |
361 |
Q |
| |
|
|||| |||| |||||||||| ||||| ||||||| ||||||||||||| |||| |
|
|
| T |
364518 |
ctgactctctacaagctctagttcttgttgttgtattactacttgatgggatg |
364466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 229; Significance: 1e-126; HSPs: 13)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 36 - 438
Target Start/End: Complemental strand, 10427598 - 10427190
Alignment:
| Q |
36 |
gtgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaac |
135 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
10427598 |
gtgttaggtaccagagtaacagaatattatcacgcaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgcggaaacccctcaac |
10427499 |
T |
|
| Q |
136 |
aaataaggggagaaaaccatggggcaagatcagagaactttcactaagtggaaga-aattataagatctctctctaaatacaaggagagacaaattaccc |
234 |
Q |
| |
|
||||||||||| ||||| | |||| || | ||| |||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||| |
|
|
| T |
10427498 |
aaataaggggaaaaaactacggggaaaaagtagataactttcactaagtggaagacaattacaagacttctctctaaatacaaggagagacaaattaccc |
10427399 |
T |
|
| Q |
235 |
tctctcttgaaataggagaatactattactaggagacacctcacataagaaactatattt--tctctatattttt--tctgagtctcaacaagctctaat |
330 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||| ||||||||||||| ||| | ||||||||||||||||| |
|
|
| T |
10427398 |
tctctcttgaaataggagaatactaacactaggagaaacctcacaggagaaactatatttcctctctatatttttcctctcactctcaacaagctctaat |
10427299 |
T |
|
| Q |
331 |
tcttcttgttgtgttactacttgatgagatgggatgaga--tgatgaaatcatgcaaatgagcttttctatttataggagaggtaagccatagttcttta |
428 |
Q |
| |
|
|||| ||||||||||||||||||||| |||| ||||||| |||||| || ||||||||| | || ||||||||||||||||||| || || ||| ||| |
|
|
| T |
10427298 |
tcttgttgttgtgttactacttgatgtgatgagatgagatgtgatgagattgtgcaaatgaac-ttgctatttataggagaggtaaaccttaattcctta |
10427200 |
T |
|
| Q |
429 |
catgcaacaa |
438 |
Q |
| |
|
|||||||||| |
|
|
| T |
10427199 |
catgcaacaa |
10427190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 37 - 259
Target Start/End: Original strand, 48701821 - 48702045
Alignment:
| Q |
37 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
136 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48701821 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
48701920 |
T |
|
| Q |
137 |
aataaggggagaaaaccatggggcaagatcagagaactttcactaagtggaagaaattataagatctctctctaaatacaaggagag-acaaattaccct |
235 |
Q |
| |
|
|||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||| | || |||||||||| ||||||||||| |||||| | || |
|
|
| T |
48701921 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccact |
48702020 |
T |
|
| Q |
236 |
ctctctt-gaaataggagaatacta |
259 |
Q |
| |
|
||||||| |||||||||||||||| |
|
|
| T |
48702021 |
ctctcttataaataggagaatacta |
48702045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 37 - 257
Target Start/End: Complemental strand, 42266220 - 42265998
Alignment:
| Q |
37 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
136 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42266220 |
tgttagataccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
42266121 |
T |
|
| Q |
137 |
aataaggggagaaaaccatggggcaagatcagagaactttcactaagtggaagaaattataagatctctctctaaatacaaggagagacaaattacc-ct |
235 |
Q |
| |
|
|||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||| | || |||||||||||||||||||||| ||||||| || |
|
|
| T |
42266120 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccact |
42266021 |
T |
|
| Q |
236 |
ctctctt-gaaataggagaatac |
257 |
Q |
| |
|
||||||| |||||||||||||| |
|
|
| T |
42266020 |
ctctcttataaataggagaatac |
42265998 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 37 - 257
Target Start/End: Complemental strand, 42270939 - 42270717
Alignment:
| Q |
37 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
136 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42270939 |
tgttagataccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
42270840 |
T |
|
| Q |
137 |
aataaggggagaaaaccatggggcaagatcagagaactttcactaagtggaagaaattataagatctctctctaaatacaaggagagacaaattacc-ct |
235 |
Q |
| |
|
|||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||| | || |||||||||||||||||||||| ||||||| || |
|
|
| T |
42270839 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccact |
42270740 |
T |
|
| Q |
236 |
ctctctt-gaaataggagaatac |
257 |
Q |
| |
|
||||||| |||||||||||||| |
|
|
| T |
42270739 |
ctctcttataaataggagaatac |
42270717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 43 - 259
Target Start/End: Original strand, 24520031 - 24520249
Alignment:
| Q |
43 |
gtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataag |
142 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24520031 |
gtaccagagtaacaaaatattatcacgcaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataag |
24520130 |
T |
|
| Q |
143 |
gggagaaaaccatggggcaagatcagagaactttcactaagtggaagaaattataagatctctctctaaatacaaggagagacaaattacc-ctctctct |
241 |
Q |
| |
|
|||| ||||||| ||||||||| ||||||||||||||||||||||||||||| | || |||||||||| ||||||||||| ||||||| |||||||| |
|
|
| T |
24520131 |
gggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaattaccactctctct |
24520230 |
T |
|
| Q |
242 |
t-gaaataggagaatacta |
259 |
Q |
| |
|
| |||||||||||||||| |
|
|
| T |
24520231 |
tataaataggagaatacta |
24520249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 37 - 259
Target Start/End: Original strand, 48697131 - 48697356
Alignment:
| Q |
37 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
136 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48697131 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagaagagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
48697230 |
T |
|
| Q |
137 |
aataagggg-agaaaaccatggggcaagatcagagaactttcactaagtggaagaaattataagatctctctctaaatacaaggagag-acaaattaccc |
234 |
Q |
| |
|
||||||||| | ||||||| ||||||||| ||||||||||||||||||||||||||||| | || |||||||||| ||||||||||| |||||| | | |
|
|
| T |
48697231 |
aataaggggaaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccac |
48697330 |
T |
|
| Q |
235 |
tctctctt-gaaataggagaatacta |
259 |
Q |
| |
|
|||||||| |||||||||||||||| |
|
|
| T |
48697331 |
tctctcttataaataggagaatacta |
48697356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 37 - 257
Target Start/End: Original strand, 30945477 - 30945698
Alignment:
| Q |
37 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
136 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30945477 |
tgttaggtatcagagtaacaaaatattatcacgcagctaaaataagagaagagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
30945576 |
T |
|
| Q |
137 |
aataaggggagaaaaccatggggcaagatcagagaactttcactaagtggaagaaattataagatctctctctaaatacaaggagagacaaattacc-ct |
235 |
Q |
| |
|
||||| |||| |||| || ||||||||| ||||||||||||||||||||||||||||| | | |||||||||||||||||||||| ||||||| || |
|
|
| T |
30945577 |
aataa-gggaaaaaatcacggggcaagagtagagaactttcactaagtggaagaaattacagaacctctctctaaatacaaggagagtacaattaccact |
30945675 |
T |
|
| Q |
236 |
ctctctt-gaaataggagaatac |
257 |
Q |
| |
|
||||||| |||||||||||||| |
|
|
| T |
30945676 |
ctctcttataaataggagaatac |
30945698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 37 - 257
Target Start/End: Original strand, 30950183 - 30950404
Alignment:
| Q |
37 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
136 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30950183 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagataagagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
30950282 |
T |
|
| Q |
137 |
aataaggggagaaaaccatggggcaagatcagagaactttcactaagtggaagaaattataagatctctctctaaatacaaggagagacaaattacc-ct |
235 |
Q |
| |
|
||||| |||| ||||||| ||||||||| ||||||||||||||||||||||||||||| | | ||||||||||||||||||| || ||||||| || |
|
|
| T |
30950283 |
aataa-gggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacagaacctctctctaaatacaaggaaagtacaattaccact |
30950381 |
T |
|
| Q |
236 |
ctctctt-gaaataggagaatac |
257 |
Q |
| |
|
||||||| |||||||||||||| |
|
|
| T |
30950382 |
ctctcttataaataggagaatac |
30950404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 50 - 221
Target Start/End: Complemental strand, 48783031 - 48782872
Alignment:
| Q |
50 |
agtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggagaa |
149 |
Q |
| |
|
|||| |||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||| |||||||||||| |||||||||||| || ||| |
|
|
| T |
48783031 |
agtatcaaaatattatcacgcgattaaaataagaaacgagaaaacaggaactgaacacacaata-tttacgtggaaatttctcaacaaataaagg--gaa |
48782935 |
T |
|
| Q |
150 |
aaccatggggcaagatcagagaactttcactaagtggaagaaattataagatctctctctaaatacaaggag |
221 |
Q |
| |
|
|| |||||| |||||||||||||||||||||||||||| | || ||||||||||||||| |||| |
|
|
| T |
48782934 |
aaacatggg---------gagaactttcactaagtggaagaaattagatgacctctctctaaatacatggag |
48782872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 39 - 116
Target Start/End: Original strand, 36615361 - 36615438
Alignment:
| Q |
39 |
ttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattt |
116 |
Q |
| |
|
|||||||| ||||||| ||||||||||| | ||| |||||||||| | |||||||||| ||| ||||| ||| ||||| |
|
|
| T |
36615361 |
ttaggtactagagtaataaaatattatcgcacagttaaaataagatatgagaaaagagaaaccgaacatacattattt |
36615438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 116
Target Start/End: Complemental strand, 30165968 - 30165900
Alignment:
| Q |
48 |
agagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattt |
116 |
Q |
| |
|
|||||||||||||| |||||| || ||||||||||| | ||||||| | ||| |||||||| ||||||| |
|
|
| T |
30165968 |
agagtaacaaaataatatcacacaactaaaataagatatgagaaaaaatgaattgaacacataatattt |
30165900 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 141
Target Start/End: Complemental strand, 1979604 - 1979567
Alignment:
| Q |
103 |
aacacacaatattttacgtggaaacccctcaacaaataa |
141 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
1979604 |
aacacacaatattt-acgtggaaacccctcaacaaataa |
1979567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 438
Target Start/End: Complemental strand, 42022958 - 42022916
Alignment:
| Q |
396 |
ctatttataggagaggtaagccatagttctttacatgcaacaa |
438 |
Q |
| |
|
|||||||||||||||| || ||||||||| ||||||||||||| |
|
|
| T |
42022958 |
ctatttataggagaggcaaaccatagttccttacatgcaacaa |
42022916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 226; Significance: 1e-124; HSPs: 11)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 36 - 438
Target Start/End: Complemental strand, 18968195 - 18967794
Alignment:
| Q |
36 |
gtgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaac |
135 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
18968195 |
gtgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaatacataatattttacgtggaaacccctcaac |
18968096 |
T |
|
| Q |
136 |
aaataaggggagaaaaccatggggcaagatcagagaactttcactaagtggaaga-aattataagatctctctctaaatacaaggagagacaaattaccc |
234 |
Q |
| |
|
||||||||||| ||||||| ||||||||| ||| |||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||| || |
|
|
| T |
18968095 |
aaataaggggaaaaaaccacggggcaagagtagaaaactttcactaagtggaagacaattacaagacttctctctaaatacaaggagagacaaattagcc |
18967996 |
T |
|
| Q |
235 |
tctctcttgaaataggagaatactattactaggagacacctcacataagaaactatattt--tctctatattttt--tctgagtctcaacaagctctaat |
330 |
Q |
| |
|
|||||| |||||||||||||||||| ||||||||| |||||||| ||||||||||||| ||| ||||||||| ||| | ||||||||||||||||| |
|
|
| T |
18967995 |
tctctcatgaaataggagaatactaacactaggagaaacctcacaagagaaactatatttcctctttatatttttcctctcactctcaacaagctctaat |
18967896 |
T |
|
| Q |
331 |
tcttcttgttgtgttactacttgatgagatgggatgagatgatgaaatcatgcaaatgagcttttctatttataggagaggtaagccatagttctttaca |
430 |
Q |
| |
|
|||| ||||||||||||||||||||| |||| ||||||||| || || ||||| | || |||||||||||||||||||||| |||||| ||||| |
|
|
| T |
18967895 |
tcttgttgttgtgttactacttgatgtgatgagatgagatg-----attgtgttaatgaac-ttgctatttataggagaggtaagccttagttccttaca |
18967802 |
T |
|
| Q |
431 |
tgcaacaa |
438 |
Q |
| |
|
|||||||| |
|
|
| T |
18967801 |
tgcaacaa |
18967794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 37 - 257
Target Start/End: Original strand, 27878709 - 27878931
Alignment:
| Q |
37 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
136 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27878709 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
27878808 |
T |
|
| Q |
137 |
aataaggggagaaaaccatggggcaagatcagagaactttcactaagtggaagaaattataagatctctctctaaatacaaggagagacaaattacc-ct |
235 |
Q |
| |
|
|||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||| | || |||||||||||||||||||||| ||||||| || |
|
|
| T |
27878809 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccact |
27878908 |
T |
|
| Q |
236 |
ctctctt-gaaataggagaatac |
257 |
Q |
| |
|
||||||| |||||||||||||| |
|
|
| T |
27878909 |
ctctcttataaataggagaatac |
27878931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 37 - 259
Target Start/End: Complemental strand, 1235018 - 1234794
Alignment:
| Q |
37 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
136 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1235018 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
1234919 |
T |
|
| Q |
137 |
aataaggggagaaaaccatggggcaagatcagagaactttcactaagtggaagaaattataagatctctctctaaatacaaggagag-acaaattaccct |
235 |
Q |
| |
|
|||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||| | || |||||||||| ||||||||||| |||||| | || |
|
|
| T |
1234918 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccact |
1234819 |
T |
|
| Q |
236 |
ctctctt-gaaataggagaatacta |
259 |
Q |
| |
|
||||||| |||||||||||||||| |
|
|
| T |
1234818 |
ctctcttataaataggagaatacta |
1234794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 37 - 259
Target Start/End: Original strand, 26976131 - 26976355
Alignment:
| Q |
37 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
136 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26976131 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
26976230 |
T |
|
| Q |
137 |
aataaggggagaaaaccatggggcaagatcagagaactttcactaagtggaagaaattataagatctctctctaaatacaaggagagacaaattacc-ct |
235 |
Q |
| |
|
|||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||| | || |||||||||| ||||||||||| ||||||| || |
|
|
| T |
26976231 |
aataaggggaaaaaaccaaggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaattaccact |
26976330 |
T |
|
| Q |
236 |
ctctctt-gaaataggagaatacta |
259 |
Q |
| |
|
||||||| |||||||||||||||| |
|
|
| T |
26976331 |
ctctcttataaataggagaatacta |
26976355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 37 - 257
Target Start/End: Original strand, 27873990 - 27874212
Alignment:
| Q |
37 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
136 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27873990 |
tgttaggtaccagagtaacaaaatattatcacgcatctaaaataagagaagagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
27874089 |
T |
|
| Q |
137 |
aataaggggagaaaaccatggggcaagatcagagaactttcactaagtggaagaaattataagatctctctctaaatacaaggagagacaaattacc-ct |
235 |
Q |
| |
|
||||| |||| ||||||| ||||||||| ||||||||||||||||||||||||||||| | || |||||||||||||||||||||| ||||||| || |
|
|
| T |
27874090 |
aataaagggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccact |
27874189 |
T |
|
| Q |
236 |
ctctctt-gaaataggagaatac |
257 |
Q |
| |
|
||||||| |||||||||||||| |
|
|
| T |
27874190 |
ctctcttataaataggagaatac |
27874212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 37 - 258
Target Start/End: Complemental strand, 30986829 - 30986602
Alignment:
| Q |
37 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaa---acccctca |
133 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||| |
|
|
| T |
30986829 |
tgttaggtatcagagtaacaaaatattatcacgtagctaaaataagagacgagaaaagaggaactgaacgcacaata-tttacgtggaaagtacccctca |
30986731 |
T |
|
| Q |
134 |
acaaataagg--ggagaaaaccatggggcaagatcagagaactttcactaagtggaagaaattataagatctctctctaaatacaaggagagacaaatta |
231 |
Q |
| |
|
|||||||||| | ||||||| ||||||||| |||||||||||||||||||||||||||| | || |||||||||||| ||||||||| ||||| |
|
|
| T |
30986730 |
acaaataaggaaaaaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattgcaggacctctctctaaatgcaaggagagtacaatta |
30986631 |
T |
|
| Q |
232 |
cc-ctctctcttg-aaataggagaatact |
258 |
Q |
| |
|
|| |||||||||| |||||| |||||||| |
|
|
| T |
30986630 |
ccactctctcttgtaaatagaagaatact |
30986602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 56 - 361
Target Start/End: Original strand, 23012520 - 23012830
Alignment:
| Q |
56 |
aaaatattatcacgcagctaaaataagagacgagaaaa-gaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggagaaaacca |
154 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||| || ||| |||||||||| ||||| |||||||||| | ||| || |||||||| ||||||| |
|
|
| T |
23012520 |
aaaatattatcacgcaactaaaataagagacgagaaaaagaagaattgaacacacattattt-acgtggaaactcgtcacaaattaagggga-aaaacca |
23012617 |
T |
|
| Q |
155 |
tggggcaagatcagagaactttcactaagtggaagaaattataagatctctctctaaatacaaggagagacaaattaccctctctct----tgaaatagg |
250 |
Q |
| |
|
|||| ||||| ||||||||||||||||||| ||||||| |||| |||| | |||||||| |||||||||||||| |||||||| ||||||| | |
|
|
| T |
23012618 |
tggg-caagagtagagaactttcactaagtgagagaaatttcaagacctcttt--aaatacaatgagagacaaattactctctctctctcttgaaatatg |
23012714 |
T |
|
| Q |
251 |
agaatactattactaggagacacctcacataagaaactatattttct--ctatatttttt---ctgagtctcaacaagctctaattcttcttgttgtgtt |
345 |
Q |
| |
|
|||||||| ||| ||||| |||| ||| |||| ||||||||| || ||||||||||| || | ||||||||||||||||||||| |||||||||| |
|
|
| T |
23012715 |
ggaatactagcacttggagaaaccttacagaagagactatatttcctttctatatttttttctctaactctcaacaagctctaattcttgttgttgtgtt |
23012814 |
T |
|
| Q |
346 |
actacttgatgagatg |
361 |
Q |
| |
|
|| |||||||| |||| |
|
|
| T |
23012815 |
acaacttgatgggatg |
23012830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 83 - 258
Target Start/End: Complemental strand, 30966923 - 30966746
Alignment:
| Q |
83 |
agacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggg-gagaaaaccatggggcaagatcagagaactttcacta |
181 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| | |||| || ||||||||| ||||||||||||||| |
|
|
| T |
30966923 |
agacgagaaaagaggaactgaacacacaata-tttacgtggaaacccatcaacaaataagggaaataaaatcacggggcaagagtagagaactttcacta |
30966825 |
T |
|
| Q |
182 |
agtggaagaaattataagatctctctctaaatacaaggagagacaaattacc-ctctctcttg-aaataggagaatact |
258 |
Q |
| |
|
||||||||||||| | | |||||||||||| ||||||||| ||||||| |||||||||| |||||| |||||||| |
|
|
| T |
30966824 |
agtggaagaaattgcagaacctctctctaaatgcaaggagagtacaattaccactctctcttgtaaatagaagaatact |
30966746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 42 - 211
Target Start/End: Complemental strand, 21966860 - 21966694
Alignment:
| Q |
42 |
ggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataa |
141 |
Q |
| |
|
||||||| |||||| ||| ||||||||||||||||| ||| | | ||||||||||||||| |||| | ||||||| | ||||||||||||||| |||||| |
|
|
| T |
21966860 |
ggtaccaaagtaacgaaacattatcacgcagctaaa-taacatatgagaaaagaggaactaaacataaaatattt-atgtggaaacccctcaataaataa |
21966763 |
T |
|
| Q |
142 |
ggggagaaaaccatggggcaagatcagagaactttcactaagtggaagaaattataagatctctctctaa |
211 |
Q |
| |
|
|||| |||| |||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||| |
|
|
| T |
21966762 |
aggga-aaaatcatggggcaagagtagagaactttcactaaatggaagaaattataagacctctctctaa |
21966694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 37 - 88
Target Start/End: Complemental strand, 30967725 - 30967674
Alignment:
| Q |
37 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacga |
88 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
30967725 |
tgttaggtaccagagtaacaaaatattatcaagcagctaaaataagagacga |
30967674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 356
Target Start/End: Original strand, 6174185 - 6174372
Alignment:
| Q |
171 |
aactttcactaagtggaagaaattataagatctctctctaaatacaaggagagacaaa-ttaccctctctcttgaaataggagaatactattactaggag |
269 |
Q |
| |
|
|||||||| ||||||| |||||||| |||| |||| ||||||||||| |||| |||| ||||| |||||||||||||| ||||||| ||||| || |
|
|
| T |
6174185 |
aactttcattaagtgggagaaattacaagacctct--ctaaatacaagtagaggcaaagttaccttctctcttgaaataaagaaatactaaaactagaag |
6174282 |
T |
|
| Q |
270 |
acacctcacataagaaactatattt--tctctatattttt-tctgagtctcaacaagctctaattcttcttgttgtgttactacttgatg |
356 |
Q |
| |
|
| ||| | | ||||||||||||| | ||||||||||| ||| | | || ||||||||||||||| |||||| |||||||||||||| |
|
|
| T |
6174283 |
aatccttataggagaaactatatttcctttctatatttttctctcactatccgcaagctctaattcttgttgttgcgttactacttgatg |
6174372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 162; Significance: 3e-86; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 36 - 259
Target Start/End: Complemental strand, 41723454 - 41723229
Alignment:
| Q |
36 |
gtgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaac |
135 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41723454 |
gtgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaac |
41723355 |
T |
|
| Q |
136 |
aaataaggggagaaaaccatggggcaagatcagagaactttcactaagtggaagaaattataagatctctctctaaatacaaggagag-acaaattaccc |
234 |
Q |
| |
|
||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||| | || |||||||||| ||||||||||| |||||| | | |
|
|
| T |
41723354 |
aaataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccac |
41723255 |
T |
|
| Q |
235 |
tctctctt-gaaataggagaatacta |
259 |
Q |
| |
|
|||||||| |||||||||||||||| |
|
|
| T |
41723254 |
tctctcttataaataggagaatacta |
41723229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 37 - 259
Target Start/End: Complemental strand, 41718727 - 41718503
Alignment:
| Q |
37 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
136 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41718727 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
41718628 |
T |
|
| Q |
137 |
aataaggggagaaaaccatggggcaagatcagagaactttcactaagtggaagaaattataagatctctctctaaatacaaggagag-acaaattaccct |
235 |
Q |
| |
|
|||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||| | || |||||||||| ||||||||||| |||||| | || |
|
|
| T |
41718627 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccact |
41718528 |
T |
|
| Q |
236 |
ctctctt-gaaataggagaatacta |
259 |
Q |
| |
|
||||||| |||||||||||||||| |
|
|
| T |
41718527 |
ctctcttataaataggagaatacta |
41718503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 37 - 259
Target Start/End: Complemental strand, 34360273 - 34360049
Alignment:
| Q |
37 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
136 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
34360273 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtagaaacccctcaaca |
34360174 |
T |
|
| Q |
137 |
aataaggggagaaaaccatggggcaagatcagagaactttcactaagtggaagaaattataagatctctctctaaatacaaggagagacaaattacc-ct |
235 |
Q |
| |
|
|||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||| | || |||||||||| ||||||||||| ||||||| || |
|
|
| T |
34360173 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaattaccact |
34360074 |
T |
|
| Q |
236 |
ctctctt-gaaataggagaatacta |
259 |
Q |
| |
|
||||||| |||||||||||||||| |
|
|
| T |
34360073 |
ctctcttataaataggagaatacta |
34360049 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 36 - 259
Target Start/End: Original strand, 29585299 - 29585524
Alignment:
| Q |
36 |
gtgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaac |
135 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29585299 |
gtgttaggtatcagagtaacaaaatattatcatgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaac |
29585398 |
T |
|
| Q |
136 |
aaataaggggagaaaaccatggggcaagatcagagaactttcactaagtggaagaaattataagatctctctctaaatacaaggagagacaaattacc-c |
234 |
Q |
| |
|
||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||| | || |||||||||| ||||| ||||| ||||||| | |
|
|
| T |
29585399 |
aaataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaagagagtacaattaccac |
29585498 |
T |
|
| Q |
235 |
tctctctt-gaaataggagaatacta |
259 |
Q |
| |
|
|||||||| |||||||||||||||| |
|
|
| T |
29585499 |
tctctcttataaataggagaatacta |
29585524 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 56 - 259
Target Start/End: Complemental strand, 34352546 - 34352341
Alignment:
| Q |
56 |
aaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggagaaaaccat |
155 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
34352546 |
aaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccac |
34352447 |
T |
|
| Q |
156 |
ggggcaagatcagagaactttcactaagtggaagaaattataagatctctctctaaatacaaggagagacaaattacc-ctctctctt-gaaataggaga |
253 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||| | || |||||||||| ||||||||||| ||||||| ||||||||| |||||||||| |
|
|
| T |
34352446 |
ggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaattaccactctctcttataaataggaga |
34352347 |
T |
|
| Q |
254 |
atacta |
259 |
Q |
| |
|
|||||| |
|
|
| T |
34352346 |
atacta |
34352341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 161; Significance: 1e-85; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 37 - 259
Target Start/End: Original strand, 9439372 - 9439596
Alignment:
| Q |
37 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
136 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9439372 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
9439471 |
T |
|
| Q |
137 |
aataaggggagaaaaccatggggcaagatcagagaactttcactaagtggaagaaattataagatctctctctaaatacaaggagag-acaaattaccct |
235 |
Q |
| |
|
|||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||| | || |||||||||| ||||||||||| |||||| | || |
|
|
| T |
9439472 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccact |
9439571 |
T |
|
| Q |
236 |
ctctctt-gaaataggagaatacta |
259 |
Q |
| |
|
||||||| |||||||||||||||| |
|
|
| T |
9439572 |
ctctcttataaataggagaatacta |
9439596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 37 - 259
Target Start/End: Original strand, 9444092 - 9444316
Alignment:
| Q |
37 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
136 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9444092 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
9444191 |
T |
|
| Q |
137 |
aataaggggagaaaaccatggggcaagatcagagaactttcactaagtggaagaaattataagatctctctctaaatacaaggagag-acaaattaccct |
235 |
Q |
| |
|
|||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||| | || |||||||||| ||||||||||| |||||| | || |
|
|
| T |
9444192 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccact |
9444291 |
T |
|
| Q |
236 |
ctctctt-gaaataggagaatacta |
259 |
Q |
| |
|
||||||| |||||||||||||||| |
|
|
| T |
9444292 |
ctctcttataaataggagaatacta |
9444316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 4799371 - 4799315
Alignment:
| Q |
54 |
acaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacaca |
110 |
Q |
| |
|
||||||||||||||| | |||||||||||||| |||||||||| || |||||||||| |
|
|
| T |
4799371 |
acaaaatattatcacactgctaaaataagagatgagaaaagagaaattgaacacaca |
4799315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 161; Significance: 1e-85; HSPs: 13)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 37 - 259
Target Start/End: Original strand, 5823275 - 5823499
Alignment:
| Q |
37 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
136 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5823275 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
5823374 |
T |
|
| Q |
137 |
aataaggggagaaaaccatggggcaagatcagagaactttcactaagtggaagaaattataagatctctctctaaatacaaggagagacaaattacc-ct |
235 |
Q |
| |
|
|||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||| | || |||||||||| ||||||||||| ||||||| || |
|
|
| T |
5823375 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaattaccact |
5823474 |
T |
|
| Q |
236 |
ctctctt-gaaataggagaatacta |
259 |
Q |
| |
|
||||||| |||||||||||||||| |
|
|
| T |
5823475 |
ctctcttataaataggagaatacta |
5823499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 37 - 259
Target Start/End: Original strand, 5818513 - 5818737
Alignment:
| Q |
37 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
136 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5818513 |
tgttaggtaccagagtaacaaaatattatcacgcaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaact |
5818612 |
T |
|
| Q |
137 |
aataaggggagaaaaccatggggcaagatcagagaactttcactaagtggaagaaattataagatctctctctaaatacaaggagagacaaattacc-ct |
235 |
Q |
| |
|
|||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||| | || |||||||||| ||||||||||| ||||||| || |
|
|
| T |
5818613 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaattaccact |
5818712 |
T |
|
| Q |
236 |
ctctctt-gaaataggagaatacta |
259 |
Q |
| |
|
||||||| |||||||||||||||| |
|
|
| T |
5818713 |
ctctcttataaataggagaatacta |
5818737 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 37 - 223
Target Start/End: Original strand, 2817263 - 2817448
Alignment:
| Q |
37 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
136 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2817263 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagaagagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
2817362 |
T |
|
| Q |
137 |
aataaggggagaaaaccatggggcaagatcagagaactttcactaagtggaagaaattataagatctctctctaaatacaaggagag |
223 |
Q |
| |
|
||||| |||| ||||||| |||||||| | |||||| |||||||||||||||||||| |||| |||||||||||||||||||||| |
|
|
| T |
2817363 |
aataa-gggaaaaaaccacagggcaagagtaaagaactctcactaagtggaagaaattacaagaactctctctaaatacaaggagag |
2817448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 37 - 257
Target Start/End: Complemental strand, 54546200 - 54545979
Alignment:
| Q |
37 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
136 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||| |
|
|
| T |
54546200 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagatgagaaaagaggaactgaacatacaata-tttacgtggaaacccctcaaca |
54546102 |
T |
|
| Q |
137 |
aataaggggagaaaaccatggggcaagatcagagaactttcactaagtggaagaaattataagatctctctctaaatacaaggagagacaaattacc-ct |
235 |
Q |
| |
|
|||||||||| ||||||| ||||| ||| ||||||||||||||||||||| ||||||| | || |||||||||| ||||||||||| ||||||| || |
|
|
| T |
54546101 |
aataaggggaaaaaaccacggggctagagtagagaactttcactaagtggatgaaattacaggacctctctctaactacaaggagagtacaattaccact |
54546002 |
T |
|
| Q |
236 |
ctctctt-gaaataggagaatac |
257 |
Q |
| |
|
||||||| |||||||||||||| |
|
|
| T |
54546001 |
ctctcttataaataggagaatac |
54545979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 190 - 438
Target Start/End: Original strand, 24671173 - 24671426
Alignment:
| Q |
190 |
aaattataagatctctctctaaatacaaggagagacaaattaccctctctcttgaaataggagaatactattactaggagacacctcacataagaaacta |
289 |
Q |
| |
|
|||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||| |
|
|
| T |
24671173 |
aaattacaagacttctctctaaatacaaggagagacaaattaccctctctcttgaaataggagaatactaacactaggagaaacctcacaggagaaacta |
24671272 |
T |
|
| Q |
290 |
tattt--tctctatattttt--tctgagtctcaacaagctctaattcttcttgttgtgttactacttgatgagatgggatgagatg---atgaaatcatg |
382 |
Q |
| |
|
||||| ||||||||||||| ||| | |||||||||||||||| |||| |||||||||||||| |||||| |||| ||||||||| ||| || || |
|
|
| T |
24671273 |
tatttcctctctatatttttcctctcactctcaacaagctctaactcttgttgttgtgttactaattgatgtgatgagatgagatgtgtatg-gattgtg |
24671371 |
T |
|
| Q |
383 |
caaatgagcttttctatttataggagaggtaagccatagttctttacatgcaacaa |
438 |
Q |
| |
|
||||||| | || |||||||||||||||||||||| |||||| ||||||||||||| |
|
|
| T |
24671372 |
caaatgaac-ttgctatttataggagaggtaagccttagttccttacatgcaacaa |
24671426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 37 - 190
Target Start/End: Original strand, 24659136 - 24659287
Alignment:
| Q |
37 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
136 |
Q |
| |
|
|||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
24659136 |
tgttaggtaccagagtaataaaatattatcacacagctaaaataagagatgagaaaagaggaactgaacacacaacattttacgtggaaacccctcaaca |
24659235 |
T |
|
| Q |
137 |
aataaggggagaaaaccatggggcaagatcagagaactttcactaagtggaaga |
190 |
Q |
| |
|
|||||||||| ||||||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
24659236 |
aataaggggaaaaaaccacggggcaaga--gtagaactttcactaagtggaaga |
24659287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 203 - 438
Target Start/End: Complemental strand, 4579241 - 4579001
Alignment:
| Q |
203 |
tctctctaaatacaaggagagacaaattaccctctctcttgaaataggagaatactattactaggagacacctcacataagaaactatattt--tctcta |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||| |||||||| ||||||||||||| |||||| |
|
|
| T |
4579241 |
tctctctaaatacaaggagagacaaattaccctctctcgtgaaataggagaatactaactctatgagaaacctcacaggagaaactatatttcctctcta |
4579142 |
T |
|
| Q |
301 |
tattttt--tctgagtctcaacaagctctaattcttcttgttgtgttactacttgatgagatgggatgagatgatgaa---atcatgcaaatgagctttt |
395 |
Q |
| |
|
||||||| ||| | ||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||| || | || ||||||||| | || |
|
|
| T |
4579141 |
tatttttcctctcactctcaacaagctctaattcttgttgttgtgttactacttgatgtgatgagatgagatg-tgtagggattgtgcaaatgaac-ttg |
4579044 |
T |
|
| Q |
396 |
ctatttataggagaggtaagccatagttctttacatgcaacaa |
438 |
Q |
| |
|
|||||||||||||||||||||| ||| || ||| ||||||||| |
|
|
| T |
4579043 |
ctatttataggagaggtaagccttagctccttagatgcaacaa |
4579001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 45 - 151
Target Start/End: Complemental strand, 4579360 - 4579254
Alignment:
| Q |
45 |
accagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggg |
144 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4579360 |
accagagtaacaaaatattatcacgcaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggg |
4579261 |
T |
|
| Q |
145 |
gagaaaa |
151 |
Q |
| |
|
|| |||| |
|
|
| T |
4579260 |
gaaaaaa |
4579254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 51 - 227
Target Start/End: Original strand, 31204781 - 31204954
Alignment:
| Q |
51 |
gtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggagaaa |
150 |
Q |
| |
|
|||||||||||||| ||||||| ||||| |||||| || |||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| ||| |
|
|
| T |
31204781 |
gtaacaaaatattagcacgcagttaaaagaagagatga-aaaagaggaactgaactcacaatattt-acgtggaaacccctcaacaaataagaggaaaaa |
31204878 |
T |
|
| Q |
151 |
accatgg-ggcaagatcagagaactttcactaagtggaagaaattataagatctctctctaaatacaaggagagacaa |
227 |
Q |
| |
|
| || || ||||| | |||||||||||||||||||| | |||||| || | ||||||||||| |||||||||||| |
|
|
| T |
31204879 |
atcacggaggcaatagtagagaactttcactaagtgggaaaaattacaaaa--cctctctaaatataaggagagacaa |
31204954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 205 - 270
Target Start/End: Complemental strand, 36420072 - 36420007
Alignment:
| Q |
205 |
tctctaaatacaaggagagacaaattaccctctctcttgaaataggagaatactattactaggaga |
270 |
Q |
| |
|
||||||||||||| |||||||||||||||| ||||||| ||||| ||||||||| |||||||||| |
|
|
| T |
36420072 |
tctctaaatacaatgagagacaaattaccccatctcttgcaatagaagaatactaatactaggaga |
36420007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 299 - 438
Target Start/End: Original strand, 34469900 - 34470029
Alignment:
| Q |
299 |
tatattttttctgagtctcaacaagctctaattcttcttgttgtgttactacttgatgagatgggatgagatgatgaaatcatgcaaatgagcttttcta |
398 |
Q |
| |
|
|||||||| ||| | |||||||||||||||||| || ||||||||||||||||| ||| |||||| ||||||| ||||||||| | |||||| |
|
|
| T |
34469900 |
tatattttctcttactctcaacaagctctaattgttgttgttgtgttactactt-----gatcggatga----atgaaattgtgcaaatgaac-tttcta |
34469989 |
T |
|
| Q |
399 |
tttataggagaggtaagccatagttctttacatgcaacaa |
438 |
Q |
| |
|
|||||||||||||||| |||||| || || ||||||||| |
|
|
| T |
34469990 |
tttataggagaggtaaaccatagctccatatatgcaacaa |
34470029 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 35977161 - 35977111
Alignment:
| Q |
174 |
tttcactaagtggaagaaattataagatctctctctaaatacaaggagaga |
224 |
Q |
| |
|
||||||||||||||| |||||| |||| |||||||||||||||||||||| |
|
|
| T |
35977161 |
tttcactaagtggaaaaaattacaagacttctctctaaatacaaggagaga |
35977111 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 81
Target Start/End: Complemental strand, 25877130 - 25877086
Alignment:
| Q |
37 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataa |
81 |
Q |
| |
|
|||||||||||||| ||||| |||||||| ||||| ||||||||| |
|
|
| T |
25877130 |
tgttaggtaccagaataacataatattattacgcaactaaaataa |
25877086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 159; Significance: 2e-84; HSPs: 13)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 46 - 438
Target Start/End: Original strand, 30396920 - 30397309
Alignment:
| Q |
46 |
ccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataagggg |
145 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||| |||||||||||||||||||||| |
|
|
| T |
30396920 |
ccagagtagcaaaatattatcacgcagctaaaataagagacgagaaaagacgaactgaacacaca-tatttt-cgttgaaacccctcaacaaataaggga |
30397017 |
T |
|
| Q |
146 |
agaaaaccatggggcaagatcagagaacttt-cactaagtggaagaaattataagatctctctctaaatacaaggagagacaaattaccctctctcttga |
244 |
Q |
| |
|
| |||| || |||| ||| |||||||||| ||||||||||||||||||| |||| |||| |||| |||||||||||||||||||||||||| | |||| |
|
|
| T |
30397018 |
aaaaaatcacagggcgagagtagagaacttttcactaagtggaagaaattacaagacctctttctatatacaaggagagacaaattaccctctatgttga |
30397117 |
T |
|
| Q |
245 |
aataggagaatactattactaggagacacctcacataagaaactatattt--tctctatattttt--tctgagtctcaacaagctctaattcttcttgtt |
340 |
Q |
| |
|
|||||||||||| || ||||||||| | |||||| ||||||||||||| |||||||||| || ||| | || ||||||||| |||||||| ||||| |
|
|
| T |
30397118 |
aataggagaatattaacactaggagaaatctcacaggagaaactatatttcctctctatattgttcctctcactcacaacaagctttaattcttgttgtt |
30397217 |
T |
|
| Q |
341 |
gtgttactacttgatgagatgggatgagatgatgaaatcatgcaaatgagcttttctatttataggagaggtaagccatagttctttacatgcaacaa |
438 |
Q |
| |
|
||||||||||||||| ||||| | || |||||| ||||||||||| | ||||||||| ||||||||||||||||||| ||||||||||||| |
|
|
| T |
30397218 |
ctgttactacttgatggaatggggt-ag----tgaaattgtgcaaatgagc-tggctatttataagagaggtaagccatagttccttacatgcaacaa |
30397309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 46 - 259
Target Start/End: Original strand, 5198664 - 5198879
Alignment:
| Q |
46 |
ccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataagggg |
145 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5198664 |
ccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataagggg |
5198763 |
T |
|
| Q |
146 |
agaaaaccatggggcaagatcagagaactttcactaagtggaagaaattataagatctctctctaaatacaaggagag-acaaattaccctctctctt-g |
243 |
Q |
| |
|
| ||||||| ||||||||| ||||||||||||||||||||||||||||| | || |||||||||| ||||||||||| |||||| | ||||||||| |
|
|
| T |
5198764 |
aaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccactctctcttat |
5198863 |
T |
|
| Q |
244 |
aaataggagaatacta |
259 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
5198864 |
aaataggagaatacta |
5198879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 37 - 195
Target Start/End: Complemental strand, 825796 - 825637
Alignment:
| Q |
37 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
136 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
825796 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccactcaaca |
825697 |
T |
|
| Q |
137 |
aataagggg-agaaaaccatggggcaagatcagagaactttcactaagtggaagaaatta |
195 |
Q |
| |
|
||||||||| | ||||||| ||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
825696 |
aataaggggaaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaatta |
825637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 37 - 195
Target Start/End: Complemental strand, 830452 - 830293
Alignment:
| Q |
37 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
136 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
830452 |
tgttaggtaccagagtaacaaaatattatcacgcagttaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
830353 |
T |
|
| Q |
137 |
aataagggg-agaaaaccatggggcaagatcagagaactttcactaagtggaagaaatta |
195 |
Q |
| |
|
||||||||| | ||||||| ||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
830352 |
aataaggggaaaaaaaccacggggcaagagtggagaactttcactaagtggaagaaatta |
830293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 48 - 213
Target Start/End: Complemental strand, 15603183 - 15603018
Alignment:
| Q |
48 |
agagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggag |
147 |
Q |
| |
|
||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15603183 |
agagtaagaaaatattatcacgcaattgaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaa |
15603084 |
T |
|
| Q |
148 |
aaaaccatggggcaagatcagagaactttcactaagtggaagaaattataagatctctctctaaat |
213 |
Q |
| |
|
||||||| ||||||||| |||||||||||||||||| |||||||||| |||| |||||||||||| |
|
|
| T |
15603083 |
aaaaccacggggcaagagtagagaactttcactaagtagaagaaattacaagacctctctctaaat |
15603018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 44 - 223
Target Start/End: Complemental strand, 28716070 - 28715893
Alignment:
| Q |
44 |
taccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataagg |
143 |
Q |
| |
|
||||||||||||||||||||||||| || ||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||| |||||||| |
|
|
| T |
28716070 |
taccagagtaacaaaatattatcacacatttaaaataagagacgacaaaagaggaattgaacacacaata-tttacgtggaaacccctcattaaataagg |
28715972 |
T |
|
| Q |
144 |
ggagaaaaccatggggcaagatcagagaactttcactaagtggaagaaattataagatctctctctaaatacaaggagag |
223 |
Q |
| |
|
||| ||||||| | |||| ||||||||||||| ||||||||||||||| | || ||||||||||| ||||||||| |
|
|
| T |
28715971 |
gga-aaaaccacaagagaagaatagagaactttcacaaagtggaagaaattacaggacatctctctaaatgcaaggagag |
28715893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 37 - 142
Target Start/End: Original strand, 31592910 - 31593015
Alignment:
| Q |
37 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
136 |
Q |
| |
|
|||| |||| || ||||||| ||||||||||| ||| || |||||||||||||||||||||||| |||| |||||| |||||||||||| | ||||| | |
|
|
| T |
31592910 |
tgttgggtatcaaagtaacataatattatcacacagatagaataagagacgagaaaagaggaacataacatacaataatttacgtggaaatctctcaata |
31593009 |
T |
|
| Q |
137 |
aataag |
142 |
Q |
| |
|
|||||| |
|
|
| T |
31593010 |
aataag |
31593015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 12175768 - 12175828
Alignment:
| Q |
57 |
aaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatatttt |
117 |
Q |
| |
|
||||||||||||||| ||||||||| ||| || |||| || || ||||||||||||||||| |
|
|
| T |
12175768 |
aaatattatcacgcaactaaaataaaagatgataaaaaagaaattgaacacacaatatttt |
12175828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 108
Target Start/End: Original strand, 13840240 - 13840311
Alignment:
| Q |
37 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacaca |
108 |
Q |
| |
|
|||| ||||||||| |||||||||||||||||| | || ||||| ||| |||||| ||||||| ||||||| |
|
|
| T |
13840240 |
tgttgggtaccagaataacaaaatattatcacgtaattataataaaagatgagaaaggaggaaccgaacaca |
13840311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 98 - 259
Target Start/End: Complemental strand, 42117876 - 42117719
Alignment:
| Q |
98 |
aactgaacacacaatattttacgtggaaacccctcaacaaataaggggagaaaaccatggggcaagatcagagaactttcactaagtggaagaaattata |
197 |
Q |
| |
|
||||||||| ||||||||| |||| |||||| ||||| |||||||||| ||||||| | | ||| | ||| |||||||| ||| | |||||||||| |
|
|
| T |
42117876 |
aactgaacatacaatattt-acgtagaaacctctcaattaataagggga-aaaaccacgagacaaaagtagataactttcattaaacgagagaaattata |
42117779 |
T |
|
| Q |
198 |
agatctctctctaaatacaaggagagacaaattaccctctctcttgaaataggagaatacta |
259 |
Q |
| |
|
||| |||||| ||||| || | ||||||||||| |||||| | |||||||||| |||||| |
|
|
| T |
42117778 |
agacctctct--aaatatgagaaaagacaaattactctctctatggaaataggagtatacta |
42117719 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 259
Target Start/End: Complemental strand, 8004254 - 8004165
Alignment:
| Q |
171 |
aactttcactaagtggaagaaattataagatctctctctaaatacaaggagagacaaattaccctctctctt-gaaataggagaatacta |
259 |
Q |
| |
|
|||||||||| | ||||||||||||||| | |||||| ||||| ||| |||| |||||| ||||||||| |||||||||||||||| |
|
|
| T |
8004254 |
aactttcactgaatggaagaaattataaaacctctctttaaatgtaagaagagtacaattacactctctcttataaataggagaatacta |
8004165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 101
Target Start/End: Original strand, 9358158 - 9358207
Alignment:
| Q |
52 |
taacaaaatattatcacgcagctaaaataagagacgagaaaagaggaact |
101 |
Q |
| |
|
|||| ||||||||| |||||||||||| || ||||||||||||| ||||| |
|
|
| T |
9358158 |
taaccaaatattattacgcagctaaaacaacagacgagaaaagaagaact |
9358207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 143
Target Start/End: Original strand, 13843865 - 13843901
Alignment:
| Q |
106 |
acacaatattttacgtggaaacccctcaacaaataagg |
143 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
13843865 |
acacaatattt-acgtggaaacccctcaacaaataagg |
13843901 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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