View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7429_low_18 (Length: 314)

Name: NF7429_low_18
Description: NF7429
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7429_low_18
NF7429_low_18
[»] chr3 (85 HSPs)
chr3 (46-314)||(54237288-54237556)
chr3 (175-314)||(25294929-25295068)
chr3 (175-313)||(45877423-45877561)
chr3 (175-314)||(29135882-29136021)
chr3 (175-314)||(29127888-29128027)
chr3 (175-313)||(29762155-29762293)
chr3 (179-314)||(3136693-3136827)
chr3 (175-314)||(7328813-7328951)
chr3 (179-314)||(51060280-51060415)
chr3 (188-314)||(47219126-47219252)
chr3 (175-304)||(49198320-49198449)
chr3 (205-314)||(7650226-7650335)
chr3 (176-312)||(53649697-53649833)
chr3 (175-314)||(13893895-13894034)
chr3 (175-314)||(28572210-28572349)
chr3 (243-314)||(49021202-49021273)
chr3 (175-313)||(54261195-54261333)
chr3 (176-312)||(51682955-51683091)
chr3 (175-314)||(31072847-31072986)
chr3 (178-313)||(35315928-35316063)
chr3 (175-312)||(6462381-6462518)
chr3 (215-308)||(50405608-50405701)
chr3 (205-313)||(30767247-30767355)
chr3 (178-314)||(47749104-47749239)
chr3 (175-314)||(15320155-15320294)
chr3 (175-310)||(26207804-26207939)
chr3 (175-314)||(42412776-42412912)
chr3 (178-314)||(15795493-15795628)
chr3 (206-314)||(26043812-26043920)
chr3 (226-314)||(43330731-43330819)
chr3 (205-312)||(3507534-3507641)
chr3 (175-314)||(41630511-41630650)
chr3 (185-291)||(3755549-3755655)
chr3 (209-314)||(24506647-24506751)
chr3 (174-295)||(47303507-47303628)
chr3 (178-314)||(7310702-7310838)
chr3 (205-313)||(47471831-47471938)
chr3 (223-314)||(928617-928708)
chr3 (178-289)||(3763023-3763133)
chr3 (223-314)||(34374441-34374532)
chr3 (175-314)||(48341989-48342128)
chr3 (175-309)||(10040526-10040659)
chr3 (255-313)||(19147010-19147068)
chr3 (175-313)||(38394175-38394311)
chr3 (205-314)||(30045820-30045929)
chr3 (205-314)||(35998570-35998678)
chr3 (238-314)||(23511599-23511675)
chr3 (188-308)||(33688933-33689053)
chr3 (196-308)||(40660332-40660444)
chr3 (205-312)||(34662320-34662427)
chr3 (175-314)||(49543488-49543627)
chr3 (265-314)||(36043673-36043722)
chr3 (192-313)||(45450447-45450567)
chr3 (215-311)||(4638163-4638259)
chr3 (178-314)||(33251634-33251770)
chr3 (246-314)||(44064584-44064652)
chr3 (176-300)||(52364813-52364937)
chr3 (230-301)||(24146340-24146411)
chr3 (205-311)||(8362576-8362682)
chr3 (262-303)||(8683250-8683291)
chr3 (217-314)||(26361966-26362063)
chr3 (245-302)||(45402362-45402419)
chr3 (249-314)||(50753340-50753405)
chr3 (230-313)||(13367448-13367531)
chr3 (175-314)||(26923260-26923399)
chr3 (232-303)||(32522005-32522076)
chr3 (243-314)||(55069678-55069749)
chr3 (228-314)||(2668083-2668169)
chr3 (244-314)||(10043720-10043790)
chr3 (183-313)||(20948061-20948191)
chr3 (179-296)||(40944856-40944972)
chr3 (205-314)||(8164552-8164661)
chr3 (175-308)||(22405548-22405681)
chr3 (256-313)||(22909833-22909890)
chr3 (266-311)||(50682525-50682570)
chr3 (223-314)||(7648757-7648848)
chr3 (255-314)||(19873421-19873480)
chr3 (262-312)||(11393476-11393526)
chr3 (14-44)||(25959433-25959463)
chr3 (189-286)||(7139735-7139832)
chr3 (265-314)||(21325123-21325172)
chr3 (203-279)||(10855381-10855457)
chr3 (262-314)||(29195318-29195370)
chr3 (14-42)||(46473278-46473306)
chr3 (262-314)||(52168569-52168621)
[»] chr1 (79 HSPs)
chr1 (175-314)||(26325782-26325921)
chr1 (175-314)||(41663855-41663994)
chr1 (175-314)||(49078084-49078223)
chr1 (176-314)||(50503360-50503498)
chr1 (175-314)||(8763961-8764100)
chr1 (175-314)||(18915837-18915976)
chr1 (175-314)||(10422758-10422897)
chr1 (175-314)||(17642003-17642142)
chr1 (192-314)||(26660125-26660246)
chr1 (176-313)||(33004015-33004152)
chr1 (175-314)||(5855492-5855631)
chr1 (175-314)||(30927726-30927865)
chr1 (205-314)||(9659178-9659286)
chr1 (184-313)||(16263524-16263653)
chr1 (175-314)||(32150921-32151060)
chr1 (205-314)||(35908757-35908865)
chr1 (175-314)||(45361881-45362020)
chr1 (223-313)||(5504049-5504139)
chr1 (175-304)||(10336486-10336615)
chr1 (205-314)||(32142845-32142954)
chr1 (175-314)||(2980930-2981069)
chr1 (243-314)||(4581681-4581752)
chr1 (175-314)||(11397888-11398026)
chr1 (188-303)||(14254278-14254393)
chr1 (175-314)||(16956436-16956575)
chr1 (175-314)||(43959820-43959959)
chr1 (175-278)||(48798105-48798208)
chr1 (178-314)||(51437442-51437566)
chr1 (175-313)||(14357725-14357863)
chr1 (193-314)||(44969653-44969773)
chr1 (188-313)||(45726433-45726558)
chr1 (230-314)||(10172970-10173054)
chr1 (175-303)||(33418125-33418253)
chr1 (204-304)||(42710147-42710247)
chr1 (175-314)||(892301-892435)
chr1 (179-310)||(17092480-17092611)
chr1 (188-314)||(37339802-37339929)
chr1 (175-313)||(2567246-2567384)
chr1 (188-314)||(12744522-12744648)
chr1 (188-314)||(12755512-12755638)
chr1 (205-278)||(28324615-28324688)
chr1 (238-314)||(50094937-50095013)
chr1 (175-314)||(9853276-9853415)
chr1 (175-314)||(17389742-17389880)
chr1 (178-313)||(18649352-18649487)
chr1 (175-314)||(34719746-34719885)
chr1 (175-314)||(40288476-40288615)
chr1 (188-314)||(15465948-15466074)
chr1 (204-314)||(33498838-33498948)
chr1 (248-314)||(35211171-35211237)
chr1 (205-314)||(13262083-13262192)
chr1 (255-303)||(10507748-10507796)
chr1 (189-313)||(31576547-31576671)
chr1 (210-313)||(21849205-21849307)
chr1 (175-314)||(34697305-34697444)
chr1 (175-253)||(34334355-34334433)
chr1 (189-285)||(13265922-13266018)
chr1 (230-314)||(18808290-18808374)
chr1 (175-314)||(17358470-17358609)
chr1 (244-314)||(6899597-6899667)
chr1 (267-313)||(45536784-45536830)
chr1 (175-313)||(50371834-50371972)
chr1 (243-314)||(12036742-12036814)
chr1 (178-314)||(41696597-41696732)
chr1 (13-44)||(25061882-25061913)
chr1 (269-312)||(30044501-30044544)
chr1 (256-314)||(3850741-3850799)
chr1 (14-44)||(40595945-40595975)
chr1 (175-225)||(41743243-41743293)
chr1 (14-44)||(48872529-48872559)
chr1 (205-314)||(18708539-18708648)
chr1 (205-314)||(31152716-31152824)
chr1 (14-43)||(44959083-44959112)
chr1 (261-314)||(47084175-47084228)
chr1 (243-291)||(5063866-5063914)
chr1 (261-313)||(8905163-8905215)
chr1 (242-306)||(17899887-17899951)
chr1 (265-313)||(34878626-34878674)
chr1 (262-314)||(46929737-46929789)
[»] chr8 (57 HSPs)
chr8 (175-314)||(2467116-2467255)
chr8 (175-314)||(8141075-8141214)
chr8 (175-314)||(10927579-10927718)
chr8 (188-314)||(45521155-45521280)
chr8 (175-314)||(6100445-6100584)
chr8 (175-314)||(14666069-14666208)
chr8 (174-312)||(15884556-15884693)
chr8 (178-314)||(9859993-9860130)
chr8 (184-312)||(4479296-4479423)
chr8 (196-313)||(18374004-18374121)
chr8 (175-314)||(583787-583924)
chr8 (175-314)||(3418511-3418650)
chr8 (175-314)||(10535402-10535540)
chr8 (175-314)||(17981414-17981553)
chr8 (175-285)||(33401826-33401936)
chr8 (215-314)||(43032914-43033013)
chr8 (189-314)||(14846563-14846687)
chr8 (215-314)||(16291201-16291300)
chr8 (175-314)||(24837215-24837354)
chr8 (215-306)||(36914439-36914530)
chr8 (242-312)||(3379812-3379882)
chr8 (175-313)||(44893277-44893415)
chr8 (175-304)||(1012985-1013114)
chr8 (205-306)||(24938568-24938669)
chr8 (205-314)||(43027308-43027417)
chr8 (230-314)||(11298265-11298349)
chr8 (215-291)||(22958783-22958859)
chr8 (175-313)||(36662377-36662515)
chr8 (175-313)||(2209756-2209894)
chr8 (230-314)||(27975919-27976003)
chr8 (230-314)||(28033188-28033272)
chr8 (182-314)||(34710565-34710697)
chr8 (224-303)||(3567926-3568005)
chr8 (205-296)||(6042824-6042915)
chr8 (243-314)||(8997542-8997613)
chr8 (249-308)||(13357960-13358019)
chr8 (210-302)||(25848182-25848276)
chr8 (175-314)||(26570897-26571036)
chr8 (249-314)||(2964123-2964188)
chr8 (269-314)||(4772049-4772094)
chr8 (231-312)||(28738151-28738232)
chr8 (246-314)||(993232-993300)
chr8 (269-313)||(1653859-1653903)
chr8 (269-313)||(1742235-1742279)
chr8 (255-314)||(8803107-8803166)
chr8 (175-314)||(16893910-16894047)
chr8 (175-285)||(35496282-35496391)
chr8 (242-314)||(3692873-3692945)
chr8 (175-279)||(33935768-33935872)
chr8 (174-313)||(6940530-6940668)
chr8 (230-313)||(23895596-23895679)
chr8 (13-44)||(36740461-36740492)
chr8 (175-253)||(38922473-38922551)
chr8 (230-279)||(22276494-22276543)
chr8 (210-279)||(29933780-29933849)
chr8 (265-313)||(68097-68145)
chr8 (238-314)||(22212513-22212589)
[»] chr7 (66 HSPs)
chr7 (175-314)||(48804655-48804794)
chr7 (175-314)||(10047874-10048013)
chr7 (175-314)||(13095830-13095969)
chr7 (175-314)||(1797432-1797571)
chr7 (183-313)||(38578866-38578996)
chr7 (175-314)||(4195200-4195339)
chr7 (179-314)||(17748380-17748515)
chr7 (175-314)||(1605913-1606052)
chr7 (175-314)||(36619252-36619391)
chr7 (175-314)||(47341848-47341987)
chr7 (203-313)||(27028279-27028389)
chr7 (179-311)||(18785645-18785777)
chr7 (175-314)||(5069813-5069952)
chr7 (175-314)||(34659198-34659337)
chr7 (158-314)||(22973916-22974078)
chr7 (175-314)||(42210260-42210399)
chr7 (175-314)||(43861970-43862109)
chr7 (175-314)||(43925484-43925623)
chr7 (179-313)||(37514897-37515031)
chr7 (193-313)||(365130-365250)
chr7 (188-312)||(26423288-26423411)
chr7 (206-314)||(39474943-39475051)
chr7 (230-314)||(45697188-45697272)
chr7 (175-314)||(21530720-21530859)
chr7 (244-314)||(24983416-24983487)
chr7 (175-307)||(4228759-4228888)
chr7 (205-314)||(10317744-10317852)
chr7 (185-314)||(48244354-48244483)
chr7 (205-313)||(22573815-22573922)
chr7 (192-312)||(27875088-27875208)
chr7 (226-313)||(3353447-3353534)
chr7 (175-314)||(14650289-14650428)
chr7 (175-314)||(22993365-22993504)
chr7 (184-314)||(29151921-29152051)
chr7 (243-313)||(41945513-41945583)
chr7 (175-308)||(45960007-45960139)
chr7 (175-314)||(24969324-24969461)
chr7 (186-306)||(28396166-28396286)
chr7 (246-314)||(48551900-48551968)
chr7 (243-314)||(8734684-8734755)
chr7 (215-314)||(23658191-23658290)
chr7 (183-314)||(32823224-32823354)
chr7 (175-314)||(39420810-39420948)
chr7 (175-314)||(43346777-43346916)
chr7 (175-314)||(44961636-44961775)
chr7 (265-314)||(28744224-28744273)
chr7 (178-314)||(21190778-21190914)
chr7 (230-306)||(39230526-39230602)
chr7 (242-313)||(3603396-3603467)
chr7 (205-308)||(5039422-5039525)
chr7 (175-305)||(45447942-45448072)
chr7 (175-292)||(4973130-4973247)
chr7 (205-310)||(14535293-14535398)
chr7 (178-314)||(16802098-16802234)
chr7 (242-313)||(29805439-29805510)
chr7 (174-304)||(41267932-41268063)
chr7 (179-314)||(42032072-42032207)
chr7 (255-308)||(9685779-9685832)
chr7 (265-314)||(34127643-34127692)
chr7 (205-314)||(49142667-49142776)
chr7 (205-281)||(30827294-30827370)
chr7 (250-314)||(32768984-32769048)
chr7 (235-310)||(38988932-38989006)
chr7 (233-279)||(34865910-34865956)
chr7 (188-314)||(48224729-48224854)
chr7 (14-42)||(8792493-8792521)
[»] chr5 (74 HSPs)
chr5 (175-314)||(42086297-42086436)
chr5 (175-314)||(1538401-1538540)
chr5 (175-314)||(19572694-19572833)
chr5 (175-312)||(20525808-20525945)
chr5 (175-314)||(42861216-42861355)
chr5 (175-313)||(14588616-14588754)
chr5 (205-314)||(9805004-9805113)
chr5 (175-314)||(8513489-8513628)
chr5 (175-314)||(18136274-18136417)
chr5 (192-314)||(23383644-23383766)
chr5 (175-314)||(5731918-5732057)
chr5 (175-314)||(12704984-12705123)
chr5 (187-314)||(24653810-24653936)
chr5 (175-314)||(30349549-30349688)
chr5 (175-314)||(41163458-41163596)
chr5 (188-314)||(4016253-4016379)
chr5 (175-313)||(25417182-25417320)
chr5 (178-314)||(5079304-5079439)
chr5 (230-314)||(20255394-20255478)
chr5 (175-314)||(9812842-9812981)
chr5 (175-314)||(13664230-13664369)
chr5 (175-314)||(38897717-38897855)
chr5 (223-314)||(39099777-39099868)
chr5 (215-314)||(40117425-40117524)
chr5 (175-313)||(11845800-11845938)
chr5 (178-304)||(15034048-15034174)
chr5 (155-313)||(20692877-20693041)
chr5 (175-314)||(7866551-7866690)
chr5 (188-306)||(35813004-35813122)
chr5 (189-314)||(12081892-12082017)
chr5 (217-314)||(20682615-20682712)
chr5 (203-314)||(14728080-14728192)
chr5 (175-314)||(12766101-12766240)
chr5 (205-312)||(42291505-42291612)
chr5 (184-314)||(41800956-41801086)
chr5 (189-314)||(7336604-7336728)
chr5 (188-313)||(21149717-21149842)
chr5 (261-314)||(36783299-36783352)
chr5 (230-314)||(3653912-3653996)
chr5 (175-271)||(28857098-28857194)
chr5 (175-314)||(23247350-23247488)
chr5 (255-314)||(28857196-28857255)
chr5 (189-312)||(37263225-37263347)
chr5 (243-314)||(43399166-43399237)
chr5 (192-314)||(9168251-9168372)
chr5 (261-314)||(28857005-28857058)
chr5 (175-279)||(7308397-7308501)
chr5 (230-314)||(20590024-20590108)
chr5 (230-314)||(21375376-21375460)
chr5 (215-314)||(22655156-22655254)
chr5 (238-301)||(24875378-24875441)
chr5 (178-301)||(35561829-35561952)
chr5 (261-312)||(40060340-40060391)
chr5 (243-313)||(24463885-24463955)
chr5 (205-314)||(18262616-18262725)
chr5 (189-293)||(14974343-14974447)
chr5 (261-313)||(16755105-16755157)
chr5 (261-313)||(25950593-25950645)
chr5 (249-313)||(27648424-27648488)
chr5 (175-279)||(30995091-30995195)
chr5 (175-314)||(24498953-24499091)
chr5 (205-303)||(18294493-18294590)
chr5 (216-302)||(32874798-32874884)
chr5 (249-314)||(7616964-7617029)
chr5 (205-314)||(14152050-14152159)
chr5 (245-313)||(2485236-2485304)
chr5 (248-314)||(17693338-17693405)
chr5 (14-44)||(91365-91395)
chr5 (175-253)||(1898971-1899049)
chr5 (232-314)||(27484188-27484270)
chr5 (205-314)||(38369700-38369808)
chr5 (269-314)||(40773337-40773382)
chr5 (175-259)||(35403565-35403649)
chr5 (14-42)||(39595424-39595452)
[»] chr4 (90 HSPs)
chr4 (175-313)||(29895761-29895899)
chr4 (175-312)||(40780861-40780998)
chr4 (175-307)||(8888996-8889128)
chr4 (175-314)||(36145213-36145352)
chr4 (175-314)||(38166001-38166140)
chr4 (175-314)||(55921008-55921147)
chr4 (175-286)||(1446800-1446911)
chr4 (175-314)||(6779185-6779324)
chr4 (175-314)||(47078432-47078571)
chr4 (175-313)||(15829673-15829811)
chr4 (176-313)||(42722378-42722514)
chr4 (176-313)||(42722576-42722713)
chr4 (175-314)||(5472846-5472985)
chr4 (188-314)||(3159467-3159593)
chr4 (188-313)||(7246645-7246770)
chr4 (188-313)||(43468334-43468459)
chr4 (215-314)||(4738632-4738731)
chr4 (175-314)||(20421748-20421886)
chr4 (175-314)||(38075407-38075546)
chr4 (175-314)||(52950056-52950195)
chr4 (175-314)||(53599034-53599173)
chr4 (175-310)||(1940779-1940911)
chr4 (175-312)||(33647695-33647832)
chr4 (178-313)||(2559284-2559419)
chr4 (215-314)||(16450314-16450413)
chr4 (175-314)||(20128283-20128422)
chr4 (203-314)||(29588738-29588849)
chr4 (175-314)||(41162880-41163019)
chr4 (205-313)||(8064797-8064905)
chr4 (205-313)||(14124020-14124128)
chr4 (222-314)||(18531540-18531632)
chr4 (175-314)||(24850625-24850763)
chr4 (178-312)||(26237422-26237554)
chr4 (215-313)||(2686454-2686552)
chr4 (174-303)||(40272340-40272469)
chr4 (205-314)||(48834698-48834806)
chr4 (179-311)||(21429279-21429411)
chr4 (237-312)||(6032643-6032718)
chr4 (175-314)||(24166424-24166563)
chr4 (175-314)||(38168231-38168369)
chr4 (243-314)||(47682380-47682451)
chr4 (205-314)||(10541020-10541128)
chr4 (205-301)||(20532420-20532516)
chr4 (230-314)||(49260663-49260747)
chr4 (242-305)||(54946290-54946353)
chr4 (243-313)||(31588728-31588798)
chr4 (192-314)||(48015071-48015193)
chr4 (185-314)||(6862209-6862336)
chr4 (205-314)||(16645122-16645231)
chr4 (230-314)||(17080072-17080156)
chr4 (179-314)||(36262765-36262898)
chr4 (223-314)||(35359758-35359849)
chr4 (175-313)||(49952144-49952283)
chr4 (189-311)||(295534-295655)
chr4 (243-313)||(14567281-14567351)
chr4 (238-312)||(14859328-14859402)
chr4 (243-313)||(43458655-43458725)
chr4 (248-314)||(50485990-50486056)
chr4 (243-312)||(13073580-13073649)
chr4 (237-314)||(14858746-14858823)
chr4 (178-314)||(4736574-4736709)
chr4 (182-314)||(15732446-15732578)
chr4 (175-303)||(20354611-20354739)
chr4 (178-313)||(27248405-27248538)
chr4 (244-304)||(46108734-46108794)
chr4 (192-308)||(48317279-48317395)
chr4 (189-279)||(12703578-12703668)
chr4 (178-303)||(55005317-55005440)
chr4 (175-312)||(7741899-7742036)
chr4 (255-308)||(13552156-13552209)
chr4 (261-314)||(27531668-27531721)
chr4 (249-314)||(38841366-38841431)
chr4 (174-302)||(3507244-3507371)
chr4 (175-314)||(3574446-3574583)
chr4 (275-314)||(1461656-1461695)
chr4 (223-278)||(14077968-14078023)
chr4 (243-314)||(14597898-14597969)
chr4 (243-314)||(21192682-21192753)
chr4 (271-314)||(25406561-25406604)
chr4 (230-313)||(30317262-30317345)
chr4 (243-306)||(37194852-37194915)
chr4 (175-290)||(41339417-41339532)
chr4 (244-314)||(4986236-4986306)
chr4 (14-44)||(7795150-7795180)
chr4 (243-313)||(15839934-15840004)
chr4 (238-283)||(28944968-28945013)
chr4 (238-302)||(21055229-21055293)
chr4 (201-313)||(24478983-24479095)
chr4 (262-314)||(33176075-33176127)
chr4 (269-313)||(45721154-45721198)
[»] chr6 (47 HSPs)
chr6 (175-314)||(6606095-6606234)
chr6 (175-314)||(5253221-5253360)
chr6 (175-314)||(13036002-13036141)
chr6 (175-314)||(19089471-19089610)
chr6 (175-314)||(21898621-21898760)
chr6 (175-314)||(14107356-14107495)
chr6 (188-314)||(12635800-12635926)
chr6 (175-314)||(8611972-8612111)
chr6 (175-314)||(8932634-8932773)
chr6 (175-314)||(8944100-8944239)
chr6 (175-314)||(13468906-13469045)
chr6 (175-314)||(29444763-29444902)
chr6 (175-313)||(8938684-8938822)
chr6 (244-314)||(14783418-14783488)
chr6 (178-313)||(29333138-29333272)
chr6 (175-313)||(9179735-9179873)
chr6 (205-314)||(3601087-3601196)
chr6 (230-314)||(9633623-9633707)
chr6 (178-314)||(12606406-12606542)
chr6 (243-314)||(30788851-30788922)
chr6 (188-312)||(11142589-11142713)
chr6 (175-314)||(10311467-10311606)
chr6 (175-308)||(2271307-2271438)
chr6 (175-313)||(24671865-24672003)
chr6 (259-314)||(13584444-13584499)
chr6 (175-314)||(34954617-34954756)
chr6 (244-314)||(31129219-31129289)
chr6 (230-314)||(30410473-30410557)
chr6 (175-314)||(3587943-3588082)
chr6 (250-312)||(8149797-8149859)
chr6 (230-312)||(32157167-32157249)
chr6 (262-311)||(4596181-4596230)
chr6 (201-314)||(5029816-5029929)
chr6 (175-280)||(9147274-9147379)
chr6 (261-314)||(21167434-21167487)
chr6 (243-313)||(10396514-10396584)
chr6 (175-305)||(33939984-33940114)
chr6 (250-314)||(14326045-14326109)
chr6 (250-314)||(14419055-14419119)
chr6 (175-295)||(19230576-19230694)
chr6 (189-240)||(2105162-2105213)
chr6 (230-280)||(5333032-5333082)
chr6 (10-44)||(12187092-12187126)
chr6 (250-308)||(17114901-17114959)
chr6 (234-279)||(1928392-1928437)
chr6 (226-303)||(8888906-8888983)
chr6 (270-314)||(21872971-21873015)
[»] chr2 (80 HSPs)
chr2 (175-313)||(12864193-12864331)
chr2 (188-313)||(14169608-14169733)
chr2 (189-313)||(6358150-6358274)
chr2 (175-311)||(34356175-34356311)
chr2 (174-313)||(38962731-38962870)
chr2 (205-314)||(12455309-12455418)
chr2 (215-314)||(16325604-16325703)
chr2 (175-314)||(18902528-18902667)
chr2 (175-312)||(20612534-20612673)
chr2 (175-314)||(25540402-25540541)
chr2 (175-314)||(41220604-41220743)
chr2 (175-313)||(2550837-2550975)
chr2 (178-312)||(2784905-2785038)
chr2 (174-314)||(10823028-10823168)
chr2 (175-314)||(7747243-7747382)
chr2 (175-314)||(8410100-8410239)
chr2 (175-313)||(21286413-21286551)
chr2 (205-314)||(44139483-44139592)
chr2 (178-314)||(42770649-42770785)
chr2 (188-303)||(331483-331598)
chr2 (175-314)||(3643885-3644024)
chr2 (175-314)||(3811689-3811828)
chr2 (174-313)||(16034905-16035044)
chr2 (175-314)||(22593104-22593241)
chr2 (175-314)||(38005371-38005510)
chr2 (189-313)||(35946722-35946845)
chr2 (175-302)||(10026626-10026753)
chr2 (175-302)||(10046487-10046613)
chr2 (175-314)||(29422184-29422323)
chr2 (154-314)||(37560115-37560281)
chr2 (175-314)||(41031904-41032042)
chr2 (175-308)||(7787025-7787158)
chr2 (175-314)||(28616377-28616516)
chr2 (188-313)||(19976806-19976931)
chr2 (246-314)||(20116610-20116678)
chr2 (215-314)||(28525453-28525553)
chr2 (175-307)||(39201513-39201645)
chr2 (188-314)||(11069860-11069986)
chr2 (188-313)||(9360747-9360872)
chr2 (207-308)||(10669593-10669694)
chr2 (181-314)||(29653602-29653730)
chr2 (178-314)||(2528339-2528475)
chr2 (185-313)||(3848913-3849041)
chr2 (230-314)||(34722704-34722788)
chr2 (174-285)||(10106556-10106667)
chr2 (223-314)||(34346285-34346376)
chr2 (243-313)||(27725977-27726047)
chr2 (175-313)||(33005721-33005858)
chr2 (244-314)||(44945631-44945701)
chr2 (188-313)||(39806884-39807009)
chr2 (192-313)||(44193465-44193589)
chr2 (256-312)||(1773644-1773700)
chr2 (250-314)||(34130300-34130364)
chr2 (175-314)||(15234059-15234198)
chr2 (243-313)||(44773300-44773370)
chr2 (261-313)||(792209-792261)
chr2 (175-279)||(21180347-21180451)
chr2 (175-279)||(41187818-41187922)
chr2 (188-279)||(15079465-15079556)
chr2 (238-313)||(16813164-16813239)
chr2 (238-313)||(16852443-16852518)
chr2 (243-314)||(24179605-24179676)
chr2 (255-314)||(34738331-34738390)
chr2 (188-303)||(37804900-37805015)
chr2 (243-313)||(18649025-18649095)
chr2 (246-312)||(21641990-21642056)
chr2 (225-279)||(30721888-30721942)
chr2 (175-297)||(45263682-45263804)
chr2 (237-314)||(5035319-5035396)
chr2 (14-51)||(19668071-19668108)
chr2 (261-314)||(44023350-44023403)
chr2 (258-314)||(10702174-10702230)
chr2 (262-314)||(44548722-44548774)
chr2 (243-314)||(13026409-13026480)
chr2 (243-314)||(26805333-26805404)
chr2 (243-312)||(36480438-36480504)
chr2 (175-314)||(14853364-14853504)
chr2 (281-314)||(29299353-29299386)
chr2 (255-304)||(35443873-35443922)
chr2 (175-284)||(41187678-41187787)
[»] scaffold0002 (2 HSPs)
scaffold0002 (175-314)||(319394-319533)
scaffold0002 (175-314)||(542-681)
[»] scaffold0291 (1 HSPs)
scaffold0291 (205-314)||(6857-6966)
[»] scaffold0016 (1 HSPs)
scaffold0016 (192-314)||(8699-8821)
[»] scaffold0170 (1 HSPs)
scaffold0170 (175-303)||(9817-9945)
[»] scaffold0384 (1 HSPs)
scaffold0384 (175-304)||(5945-6073)
[»] scaffold0006 (1 HSPs)
scaffold0006 (175-310)||(68489-68621)
[»] scaffold0209 (1 HSPs)
scaffold0209 (175-314)||(12547-12684)
[»] scaffold0086 (1 HSPs)
scaffold0086 (205-313)||(26185-26293)
[»] scaffold0009 (2 HSPs)
scaffold0009 (237-313)||(42831-42907)
scaffold0009 (256-312)||(9495-9551)
[»] scaffold0010 (1 HSPs)
scaffold0010 (215-314)||(155709-155808)
[»] scaffold0004 (2 HSPs)
scaffold0004 (188-314)||(7833-7959)
scaffold0004 (175-314)||(94978-95116)
[»] scaffold0316 (1 HSPs)
scaffold0316 (205-314)||(1612-1721)
[»] scaffold0050 (2 HSPs)
scaffold0050 (175-314)||(72605-72743)
scaffold0050 (261-314)||(72813-72866)
[»] scaffold0011 (2 HSPs)
scaffold0011 (238-313)||(224352-224427)
scaffold0011 (242-312)||(186556-186626)
[»] scaffold0223 (1 HSPs)
scaffold0223 (223-313)||(16899-16989)
[»] scaffold0029 (1 HSPs)
scaffold0029 (205-314)||(41046-41155)
[»] scaffold0005 (3 HSPs)
scaffold0005 (175-279)||(271107-271211)
scaffold0005 (243-313)||(250024-250094)
scaffold0005 (243-314)||(219409-219480)
[»] scaffold0635 (1 HSPs)
scaffold0635 (174-285)||(2117-2228)
[»] scaffold0041 (1 HSPs)
scaffold0041 (217-313)||(25100-25195)
[»] scaffold0376 (1 HSPs)
scaffold0376 (179-313)||(12646-12780)
[»] scaffold0116 (1 HSPs)
scaffold0116 (174-304)||(17361-17491)
[»] scaffold0001 (1 HSPs)
scaffold0001 (230-314)||(65150-65234)
[»] scaffold0079 (1 HSPs)
scaffold0079 (272-314)||(8232-8274)
[»] scaffold0155 (1 HSPs)
scaffold0155 (255-312)||(19307-19364)
[»] scaffold0024 (1 HSPs)
scaffold0024 (223-314)||(149405-149496)
[»] scaffold0013 (1 HSPs)
scaffold0013 (207-313)||(51735-51837)
[»] scaffold0332 (1 HSPs)
scaffold0332 (175-231)||(15303-15359)


Alignment Details
Target: chr3 (Bit Score: 217; Significance: 1e-119; HSPs: 85)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 46 - 314
Target Start/End: Original strand, 54237288 - 54237556
Alignment:
Q  46 catttggaaatcttggaataagaaaattttaaaaaatagagttgttcgtggaggctttattggagaacgtaaaattggtgtcccggtgttggaactaaat 145  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  54237288 catttggaaatcttggaataagaaaattttaaaaaatagagttgtccgtggaggctttattggagaaggtaaaattggtgtcctggtgttggaactaaat 54237387  T
Q  146 caatcaaccaatcaagttgtttgggctctaaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcag 245  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||| |||||  ||||||||||| ||||    
T  54237388 caatcaaccaatcaagttgtttgggctctaagaagcttctttcaaggacgtatccgggaaatatcggggtcgattttcagggagaacaacacttggtcag 54237487  T
Q  246 tgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  54237488 tgcgcatgtctctacgcatgagccggataagtcgtccaccattagtgggtcggaaaccggtgcgaaagc 54237556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 25294929 - 25295068
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||||||| | ||||||||| | ||||  | ||||||||||||||||  ||||||||||| ||||||||||||||||||||    
T  25294929 aaggagctccttccaaggacgtatccggggaataccgggtttgattctctggggaaacaacacttggccagtgcgcatgcctctatgcatgagccggatt 25295028  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  25295029 agtcgtccaccattggtgggttggaaaccggtgcgaaagc 25295068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 175 - 313
Target Start/End: Original strand, 45877423 - 45877561
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||  ||| |||||||||||||| | ||||||||| ||||||||||||||||||||||||||  |||||| |||| ||||| ||||||||||||||    
T  45877423 aaggagccccttccaaggacgtatccggggaataccgggttcgatttccaggggaaacaacacttggccagtgcacatgcctctacgcatgagccggatt 45877522  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    |||||| |||||||| |||||||||||||||||||||||    
T  45877523 agtcgttcaccattgatgggtcggaaaccggtgcgaaag 45877561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 29135882 - 29136021
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||||||| |||||||||||||| | ||||||||  |||||| ||||||| |||||||||||  ||||||||||| ||||| ||||||||||||||    
T  29135882 aaggagcttcttccaaggacgtatccggggaataccggattcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggatt 29135981  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||| |||||||||||||||| |||||||||| |||||||    
T  29135982 agtcttccaccattggtgggttggaaaccggtacgaaagc 29136021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 29127888 - 29128027
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||| | ||| |||||||||||| | | |||| |||| |||||||||||||  ||||||||||| |||||||||||| ||||| ||||||||||||||    
T  29127888 aaggagatccttccaaggacgtatctggggaatatcgggttcgatttccagggagaacaacacttggtcagtgcgcatgcctctacgcatgagccggatt 29127987  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||| ||||| |||||||||||||||||| |||||||||    
T  29127988 agtcgcccacctttggtgggtcggaaaccgatgcgaaagc 29128027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 175 - 313
Target Start/End: Complemental strand, 29762293 - 29762155
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||| |||| || | |||| ||||  |||||  |||||| |||||||||||  ||||||||||| |||||||||||||| |||||    
T  29762293 aaggagctccttccaaggatgtattcggggaatatcgggtccgattctcaggggcaacaacacttggccagtgcgcatgcctctatgcatgagctggatt 29762194  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    |||||||||||||||||||||||||||||||||||||||    
T  29762193 agtcgtccaccattggtgggtcggaaaccggtgcgaaag 29762155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 179 - 314
Target Start/End: Complemental strand, 3136827 - 3136693
Alignment:
Q  179 agcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtc 278  Q
    |||| |||||||||||||| ||| | ||||||||  ||||||| |||||||| |||||||||  ||||||||||| ||||| ||||||| ||||||||||    
T  3136827 agctcctttcaaggacgtacccggggaataccggattcgattttcaggggaa-caacacttgggcagtgcgcatgcctctacgcatgagtcggattagtc 3136729  T
Q  279 gtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||| ||||| ||||||||||||||||||||||    
T  3136728 gtccacctttggttggtcggaaaccggtgcgaaagc 3136693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 7328813 - 7328951
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||| | ||| |||||||||| ||| ||||||||||| |||||| ||||||| |||||||||||  ||||||||||| || || ||||||||||||||    
T  7328813 aaggagttccttccaaggacgtacccgggaaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcct-tacgcatgagccggatt 7328911  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||| ||||| ||||||||||| ||||||||||||||||    
T  7328912 agtcgcccacctttggtgggtcgaaaaccggtgcgaaagc 7328951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 179 - 314
Target Start/End: Complemental strand, 51060415 - 51060280
Alignment:
Q  179 agcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtc 278  Q
    |||| ||| ||||||  |||||| | |||| |||| ||||||  |||||| ||||||||||| |||||||||||| ||||| |||||| | |||||||||    
T  51060415 agctccttccaaggatctatccggggaatatcgggttcgattctcagggggaacaacacttggtcagtgcgcatgcctctacgcatgaactggattagtc 51060316  T
Q  279 gtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||||||||||||||||||||||||||||    
T  51060315 gtccaccattggtgggtcggaaaccggtgcgaaagc 51060280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 188 - 314
Target Start/End: Original strand, 47219126 - 47219252
Alignment:
Q  188 caaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccat 287  Q
    |||||||||||||| | |||||| || |||||| ||| |||||||||| ||||   |||||||||| ||||| ||||||||||||||||||||||||| |    
T  47219126 caaggacgtatccggggaataccaggttcgattcccaagggaaacaacgcttggctagtgcgcatgcctctacgcatgagccggattagtcgtccacctt 47219225  T
Q  288 tggtgggtcggaaaccggtgcgaaagc 314  Q
    || ||||||||||||||||||||||||    
T  47219226 tgatgggtcggaaaccggtgcgaaagc 47219252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 175 - 304
Target Start/End: Original strand, 49198320 - 49198449
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||| ||||| ||||||| |||||| | ||||||||| |||||| | ||||| |||||||||||  ||||||||||| ||||| ||||||||||||||    
T  49198320 aaggagtttcttccaaggacatatccggggaataccgggttcgattcctagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggatt 49198419  T
Q  275 agtcgtccaccattggtgggtcggaaaccg 304  Q
    ||||||||||||||||||| || |||||||    
T  49198420 agtcgtccaccattggtggatcagaaaccg 49198449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 205 - 314
Target Start/End: Original strand, 7650226 - 7650335
Alignment:
Q  205 aataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccg 304  Q
    ||||||||| |||||||||||||| |||||||||||  |||| || ||||||||| ||| ||||||||||||||| ||||| ||||||||| ||||||||    
T  7650226 aataccgggttcgatttccagggggaacaacacttggccagtacgaatgtctctacgcacgagccggattagtcgcccacctttggtgggttggaaaccg 7650325  T
Q  305 gtgcgaaagc 314  Q
    ||||||||||    
T  7650326 gtgcgaaagc 7650335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 176 - 312
Target Start/End: Original strand, 53649697 - 53649833
Alignment:
Q  176 aggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatta 275  Q
    ||||||| ||| ||||||||||| || | ||||||||| ||||||  |||||  |||||||||||  |||||||| |||||||| |||||||||||||||    
T  53649697 aggagctccttccaaggacgtattcggggaataccgggttcgattctcagggtgaacaacacttggccagtgcgcctgtctctacgcatgagccggatta 53649796  T
Q  276 gtcgtccaccattggtgggtcggaaaccggtgcgaaa 312  Q
    ||||| |||| ||| ||| ||||||||||||||||||    
T  53649797 gtcgttcacctttgatggatcggaaaccggtgcgaaa 53649833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 13893895 - 13894034
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| ||||||||| |||| | ||||||||| | |||||||||||| |||||| |||| ||| |||||||| |||||  || ||||||||||    
T  13893895 aaggagctccttccaaggacgtgtccggggaataccgggttggatttccagggggaacaacgcttggtcaatgcgcatgcctctacacacgagccggatt 13893994  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||| ||||| ||||||| ||| ||||||||||||||||    
T  13893995 agtcgcccacctttggtggatcgaaaaccggtgcgaaagc 13894034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 28572349 - 28572210
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| |||||||| ||| | ||| | ||||| ||| |||||| |||||||||||||| ||||  ||||  ||||| ||||| ||| ||||||||||    
T  28572349 aaggagctcctttcaagaacgcacccggggaatactgggttcgattcccaggggaaacaacgcttggccagtatgcatgcctctacgcacgagccggatt 28572250  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||| ||||| ||||||||||||||||||||||||||||    
T  28572249 agtcgcccacctttggtgggtcggaaaccggtgcgaaagc 28572210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 243 - 314
Target Start/End: Complemental strand, 49021273 - 49021202
Alignment:
Q  243 cagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49021273 cagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 49021202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 175 - 313
Target Start/End: Original strand, 54261195 - 54261333
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||| | | | ||||||||| |||||| | ||| | |||||| ||||  ||||||||||| ||||| ||||||||||||||    
T  54261195 aaggagctccttccaaggacgtacctggggaataccgggttcgattcctaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggatt 54261294  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    |||||| |||| || ||||||||||||||||||||||||    
T  54261295 agtcgttcacctttagtgggtcggaaaccggtgcgaaag 54261333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 176 - 312
Target Start/End: Complemental strand, 51683091 - 51682955
Alignment:
Q  176 aggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatta 275  Q
    ||||||| ||| ||| |||||||||| | |||||| || |||||| ||||||| |||||| ||||| ||||||||||| ||||   || |||||||||||    
T  51683091 aggagctccttccaaagacgtatccggggaataccaggttcgattcccagggggaacaacgcttgaccagtgcgcatgcctctccacacgagccggatta 51682992  T
Q  276 gtcgtccaccattggtgggtcggaaaccggtgcgaaa 312  Q
    |||| |||||| |||||||||||||||| ||||||||    
T  51682991 gtcgcccaccaatggtgggtcggaaaccagtgcgaaa 51682955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 31072847 - 31072986
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| |||||||||||||| |||   |||||| || |||||||||||||| |||||| |||| ||||||| |||| ||||| ||| || || ||||    
T  31072847 aaggagctcctttcaaggacgtacccggagaataccaggttcgatttccagggggaacaacgcttggtcagtgcacatgcctctacgcacgacccagatt 31072946  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    | ||||||||| ||||| ||| ||||||||||||||||||    
T  31072947 aatcgtccacctttggtaggttggaaaccggtgcgaaagc 31072986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 178 - 313
Target Start/End: Original strand, 35315928 - 35316063
Alignment:
Q  178 gagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagt 277  Q
    ||||| ||| |||||||||| |||   |||| |||| |||||| ||||||| |||||||||||  ||||||||||| ||||| |||||||| ||||||||    
T  35315928 gagctccttccaaggacgtacccggagaatatcgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagctggattagt 35316027  T
Q  278 cgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    || ||||  |||||||||||||||||| ||||||||    
T  35316028 cgcccacttttggtgggtcggaaaccgatgcgaaag 35316063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 175 - 312
Target Start/End: Original strand, 6462381 - 6462518
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||||| | | ||||||||| ||||||  |||||  |||||| ||||  ||||||||||| ||||| ||||||||||||||    
T  6462381 aaggagctccttccaaggacgtatctggggaataccgggttcgattcacagggagaacaacgcttggccagtgcgcatgcctctacgcatgagccggatt 6462480  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaa 312  Q
    ||||| |||  ||| |||||| ||||||||||||||||    
T  6462481 agtcgaccattattagtgggttggaaaccggtgcgaaa 6462518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 215 - 308
Target Start/End: Complemental strand, 50405701 - 50405608
Alignment:
Q  215 tcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgc 308  Q
    |||||| | |||||||||||| ||||| ||||||||||| ||||| ||| ||| ||||||||||| ||||||||||||||||||||||||||||    
T  50405701 tcgattccgaggggaaacaacgcttgaccagtgcgcatgcctctacgcacgagtcggattagtcgcccaccattggtgggtcggaaaccggtgc 50405608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 205 - 313
Target Start/End: Complemental strand, 30767355 - 30767247
Alignment:
Q  205 aataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccg 304  Q
    |||| |||| |||||||||||||| |||||||||||  ||||| ||||| ||||| ||| ||||||||||||||| ||||| ||||||||||||||||      
T  30767355 aatatcgggttcgatttccagggggaacaacacttggccagtgtgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaacta 30767256  T
Q  305 gtgcgaaag 313  Q
    |||||||||    
T  30767255 gtgcgaaag 30767247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 178 - 314
Target Start/End: Complemental strand, 47749239 - 47749104
Alignment:
Q  178 gagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagt 277  Q
    ||||||||| |||||||||||||  | ||||||||| |||||| | ||||||| |||| ||||  ||||||||||| ||||| ||| |||||| ||||||    
T  47749239 gagcttcttccaaggacgtatccagggaataccgggttcgattcctaggggaa-caactcttggccagtgcgcatgcctctacgcacgagccgaattagt 47749141  T
Q  278 cgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    || ||||| ||||| |||||||||||| |||||||||    
T  47749140 cgcccacctttggtaggtcggaaaccgatgcgaaagc 47749104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 15320155 - 15320294
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||| ||| | ||||||||| |||||||| ||| | |||||   |||  ||||| ||||| ||||| ||| ||||||||||    
T  15320155 aaggagctccttccaaggacgtacccggggaataccgggttcgatttcgaggaggaacaatgattggccagtgtgcatgcctctacgcacgagccggatt 15320254  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||| ||||| |||||||||| |||||||||||||||||    
T  15320255 agtcgcccacctttggtgggtcagaaaccggtgcgaaagc 15320294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 175 - 310
Target Start/End: Complemental strand, 26207939 - 26207804
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||| ||| ||| | ||||||||| |||||| ||| ||| |||||| ||||  ||||| ||||| ||||| ||||||||||||||    
T  26207939 aaggagctccttccaaggatgtacccggggaataccgggttcgattcccacggggaacaacgcttgtccagtgtgcatgcctctacgcatgagccggatt 26207840  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcga 310  Q
    ||||| |||  ||| |||||||||||||||||||||    
T  26207839 agtcggccattattagtgggtcggaaaccggtgcga 26207804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 42412912 - 42412776
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||||||| | ||||||||| |||||| || |||| |||||| ||||   ||||| |||| ||||| ||||||||||||||    
T  42412912 aaggagctccttccaaggacgtatccggggaataccgggttcgattcccggggggaacaacgcttggcaagtgcccatgcctctacgcatgagccggatt 42412813  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||  |||||   ||||||||||||||||||| |||||    
T  42412812 agtcgctcacca---gtgggtcggaaaccggtgcaaaagc 42412776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 314
Target Start/End: Complemental strand, 15795628 - 15795493
Alignment:
Q  178 gagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagt 277  Q
    ||||| ||| |||||||||| ||| | ||||||| | |||||| ||||||||| |||| |||| |||||||||||| ||||| ||| |||| | ||||||    
T  15795628 gagctccttccaaggacgtacccggggaataccgagttcgattcccaggggaa-caacgcttggtcagtgcgcatgcctctacgcacgagctgaattagt 15795530  T
Q  278 cgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    || |||||| |||||||||| |||||||||| |||||    
T  15795529 cgcccaccaatggtgggtcgaaaaccggtgcaaaagc 15795493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 206 - 314
Target Start/End: Original strand, 26043812 - 26043920
Alignment:
Q  206 ataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccgg 305  Q
    |||||||| |||||| ||||||  |||||||||||  ||||||||||| ||||| |||||||||||||||||||  |||| |||||| ||| ||||||||    
T  26043812 ataccgggttcgattcccagggagaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctttggtgagtcagaaaccgg 26043911  T
Q  306 tgcgaaagc 314  Q
     ||||||||    
T  26043912 ggcgaaagc 26043920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 226 - 314
Target Start/End: Complemental strand, 43330819 - 43330731
Alignment:
Q  226 gggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||||||||||||| ||||||||||| ||||| ||| ||||||||||||||| ||||| ||||||||||  |||||||| |||||||    
T  43330819 gggaaacaacacttgaccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcaaaaaccggtacgaaagc 43330731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 205 - 312
Target Start/End: Complemental strand, 3507641 - 3507534
Alignment:
Q  205 aataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccg 304  Q
    ||||||||| | |||| | || || |||||||||||  ||||||||||| ||||| ||| |||||||||||||||  |||| ||||||||||||||||||    
T  3507641 aataccgggtttgattcctagagggaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcgctcacctttggtgggtcggaaaccg 3507542  T
Q  305 gtgcgaaa 312  Q
    ||||||||    
T  3507541 gtgcgaaa 3507534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 41630650 - 41630511
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| || ||||||| |||  |||||||||| || ||| ||| ||| |||||| ||||  ||||||||||| |||||  |||||||||||||    
T  41630650 aaggagctccttccatggacgtaaccggaaaataccgggttcaattcccaaggggaacaacgcttgcccagtgcgcatgcctctacacatgagccggatt 41630551  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||| ||||| ||||| |||||||||| |||| ||||||    
T  41630550 agtcgcccacctttggttggtcggaaactggtgtgaaagc 41630511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 185 - 291
Target Start/End: Original strand, 3755549 - 3755655
Alignment:
Q  185 tttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccac 284  Q
    ||||||||||||||||| | |||||||   |||||| ||||| | ||||||  |||| ||||||||||||||||| ||||||||||||||||||||| ||    
T  3755549 tttcaaggacgtatccggggaataccgacttcgattcccaggaggaacaacgtttgaccagtgcgcatgtctctacgcatgagccggattagtcgtctac 3755648  T
Q  285 cattggt 291  Q
    | |||||    
T  3755649 ctttggt 3755655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 314
Target Start/End: Complemental strand, 24506751 - 24506647
Alignment:
Q  209 ccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgc 308  Q
    ||||| ||||||| ||||| ||||||| ||||| |||||| |||| ||||| ||||||| | |||||||||  |||||||||||||||||||||||||||    
T  24506751 ccgggttcgattttcaggg-aaacaacgcttgaccagtgcacatgcctctacgcatgagtcagattagtcgctcaccattggtgggtcggaaaccggtgc 24506653  T
Q  309 gaaagc 314  Q
     |||||    
T  24506652 aaaagc 24506647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 295
Target Start/End: Complemental strand, 47303628 - 47303507
Alignment:
Q  174 taaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggat 273  Q
    |||||||||| || ||||||||||||||  ||||| |||| | |||| ||||| | ||||||||||| ||||||| |||| |||||  ||||||||||||    
T  47303628 taaggagctttttccaaggacgtatccggaaaatatcgggtttgattcccaggaggaacaacacttggtcagtgcacatgcctctacacatgagccggat 47303529  T
Q  274 tagtcgtccaccattggtgggt 295  Q
    |||||||| ||| |||| ||||    
T  47303528 tagtcgtcaacctttggcgggt 47303507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 178 - 314
Target Start/End: Complemental strand, 7310838 - 7310702
Alignment:
Q  178 gagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagt 277  Q
    ||||| ||| |||| ||||| | ||| ||||||||| |||||| |||| || |||||||||||  | ||| ||||| ||||| ||| |||||||||||||    
T  7310838 gagctccttccaagaacgtacctgaggaataccgggttcgattcccagtgggaacaacacttgcccggtgtgcatgcctctacgcacgagccggattagt 7310739  T
Q  278 cgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||  || | |||||||||||||||||| |||||||||    
T  7310738 cgctcatctttggtgggtcggaaaccgatgcgaaagc 7310702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 205 - 313
Target Start/End: Original strand, 47471831 - 47471938
Alignment:
Q  205 aataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccg 304  Q
    ||||||||| |||||| ||||||||| |||  ||||   ||||||||||  |||| |||||||||| |||||||||||||| ||||||||||||||||||    
T  47471831 aataccgggttcgattcccaggggaa-caatgcttggctagtgcgcatgcttctacgcatgagccgaattagtcgtccacctttggtgggtcggaaaccg 47471929  T
Q  305 gtgcgaaag 313  Q
     ||||||||    
T  47471930 atgcgaaag 47471938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 314
Target Start/End: Original strand, 928617 - 928708
Alignment:
Q  223 caggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||| |||||||||||| ||||||||||| | ||| ||| |||||||||||||| |||||| |||||| |||| ||| ||||||||||||    
T  928617 cagggggaacaacacttgaccagtgcgcatgccgctacgcacgagccggattagtcatccacctttggtgagtcgaaaatcggtgcgaaagc 928708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 289
Target Start/End: Original strand, 3763023 - 3763133
Alignment:
Q  178 gagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagt 277  Q
    ||||| |||||||||||||||||| ||||||||||  ||||||  ||| |||| |||| |||| |||||| ||||||||||| ||| || | ||||||||    
T  3763023 gagctcctttcaaggacgtatccgggaaataccggattcgattcacagaggaa-caacgcttggtcagtgtgcatgtctctacgcacgaactggattagt 3763121  T
Q  278 cgtccaccattg 289  Q
    ||||||||||||    
T  3763122 cgtccaccattg 3763133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 314
Target Start/End: Complemental strand, 34374532 - 34374441
Alignment:
Q  223 caggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||||||||||||||| |||||||||||| ||| | |||| || ||||||||||| ||  | ||||||||||||||||||||| ||||||    
T  34374532 caggggaaacaacacttggtcagtgcgcatgcctcaacgcataagtcggattagtcgcccttctttggtgggtcggaaaccggtgtgaaagc 34374441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 48341989 - 48342128
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||| | | | ||||||||| || ||| | ||||| |||||| ||||   |||||||||| ||||| |||||| || ||||    
T  48341989 aaggagctccttccaaggacgtacctggggaataccgggttctattcctagggggaacaacgcttggctagtgcgcatgcctctacgcatgaaccagatt 48342088  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||| | ||||||| |||||||| |||||||||||    
T  48342089 agtcgtccatctttggtggatcggaaacaggtgcgaaagc 48342128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 175 - 309
Target Start/End: Original strand, 10040526 - 10040659
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| |||  ||||||||| ||| | |||| |||| ||||||  |||||||| |||| ||||  ||||||||||| ||||| ||| |||||||| |    
T  10040526 aaggagctccttctaaggacgtacccggggaatatcgggttcgattctcaggggaa-caacgcttggccagtgcgcatgcctctacgcacgagccggaat 10040624  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcg 309  Q
     |||||||||| ||||||||| |||||||||||||    
T  10040625 ggtcgtccacctttggtgggttggaaaccggtgcg 10040659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 255 - 313
Target Start/End: Original strand, 19147010 - 19147068
Alignment:
Q  255 ctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    ||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||    
T  19147010 ctctatgcacgagctggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 19147068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 175 - 313
Target Start/End: Complemental strand, 38394311 - 38394175
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||||||| |||||||||||| ||  ||||||||  ||||||  ||||||||||||| || |  ||||||| |||| |||| ||||||||||||||    
T  38394311 aaggagcttcttccaaggacgtatctgaagaataccggt-tcgattctcaggggaaacaacgctcgg-cagtgcgtatgtttctacgcatgagccggatt 38394214  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    ||||  |||||| ||||||||| || ||||||| |||||    
T  38394213 agtcacccaccagtggtgggtcagagaccggtgtgaaag 38394175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 205 - 314
Target Start/End: Original strand, 30045820 - 30045929
Alignment:
Q  205 aataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccg 304  Q
    ||||||||| |||||| | ||||| |||||| ||||  ||||||||||||||||| ||| ||| | ||||||||||||||| ||| ||||||| ||||      
T  30045820 aataccgggttcgattcctagggggaacaacgcttggccagtgcgcatgtctctacgcacgagtctgattagtcgtccacctttgatgggtcgtaaacta 30045919  T
Q  305 gtgcgaaagc 314  Q
    ||||||||||    
T  30045920 gtgcgaaagc 30045929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 205 - 314
Target Start/End: Complemental strand, 35998678 - 35998570
Alignment:
Q  205 aataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccg 304  Q
    ||||||||| | |||||| |||| ||||||| |||||||||||| |||| ||||| ||| |||  |||||| ||||||||| || ||||||| |||||||    
T  35998678 aataccgggtttgatttcgaggg-aaacaacgcttgatcagtgcacatgcctctacgcacgagttggattaatcgtccacctttagtgggtcagaaaccg 35998580  T
Q  305 gtgcgaaagc 314  Q
    ||||||||||    
T  35998579 gtgcgaaagc 35998570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 314
Target Start/End: Original strand, 23511599 - 23511675
Alignment:
Q  238 ttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||| ||||||||||| ||||| ||||||| ||||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  23511599 ttgaccagtgcgcatgcctctacgcatgagtcggattaatcgtccacctttgatgggtcgaaaaccggtgcgaaagc 23511675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 188 - 308
Target Start/End: Original strand, 33688933 - 33689053
Alignment:
Q  188 caaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccat 287  Q
    |||||||||||| | | |||| |||| || ||| | | ||| || ||||||||  ||||||||||| ||||| ||||||||| | |||||| ||||||||    
T  33688933 caaggacgtatcgggggaatatcgggttcaattcctaaggggaataacacttggccagtgcgcatgcctctacgcatgagccagtttagtcatccaccat 33689032  T
Q  288 tggtgggtcggaaaccggtgc 308  Q
    |||||||| ||||||||||||    
T  33689033 tggtgggttggaaaccggtgc 33689053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 196 - 308
Target Start/End: Complemental strand, 40660444 - 40660332
Alignment:
Q  196 tatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggt 295  Q
    |||||| ||||||||||  |||||| | ||| | ||||||| ||| |||||||||||| ||||| |||||| |||||||| || | |||| |||||||||    
T  40660444 tatccgggaaataccggattcgattcctaggaggaacaacatttggtcagtgcgcatgcctctacgcatgaaccggattaatcattcacctttggtgggt 40660345  T
Q  296 cggaaaccggtgc 308  Q
    || ||||||||||    
T  40660344 cgaaaaccggtgc 40660332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 205 - 312
Target Start/End: Complemental strand, 34662427 - 34662320
Alignment:
Q  205 aataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccg 304  Q
    |||| |||| ||||||| |||| | || |||  ||| ||||| ||||||||||||||||||||||| |||||||||||||| || |||| | ||||||||    
T  34662427 aatatcgggttcgattttcaggaggaataacgtttggtcagtacgcatgtctctatgcatgagccgaattagtcgtccacctttagtggattggaaaccg 34662328  T
Q  305 gtgcgaaa 312  Q
     |||||||    
T  34662327 atgcgaaa 34662320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 49543488 - 49543627
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||||||  | |||| |||| ||||||  || ||| ||||||  ||| |||||| ||||| ||||| ||| |||||| |||    
T  49543488 aaggagctccttccaaggacgtatcccgggaatatcgggttcgattctcatggggaacaacgtttggtcagtgtgcatgcctctacgcacgagccgaatt 49543587  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||| ||||| || ||||||||||||| ||| |||||||    
T  49543588 agtcgcccacctttagtgggtcggaaactggtacgaaagc 49543627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 265 - 314
Target Start/End: Complemental strand, 36043722 - 36043673
Alignment:
Q  265 gagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  36043722 gagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaagc 36043673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 192 - 313
Target Start/End: Complemental strand, 45450567 - 45450447
Alignment:
Q  192 gacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggt 291  Q
    ||||||||||   ||||| ||| | |||||||||||||| |||  ||||| ||||||||||| ||||| |||| |||  ||||||||||||||| ||| |    
T  45450567 gacgtatccgtagaatactgggtttgatttccaggggaa-caatgcttgaccagtgcgcatgcctctacgcataagctagattagtcgtccacctttgat 45450469  T
Q  292 gggtcggaaaccggtgcgaaag 313  Q
    | || |||||||||||||||||    
T  45450468 gagttggaaaccggtgcgaaag 45450447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 215 - 311
Target Start/End: Original strand, 4638163 - 4638259
Alignment:
Q  215 tcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaa 311  Q
    |||||| ||||| |||||||| ||||| ||||||||||  ||||| ||| ||||||||||||| | ||||| ||  |||||||||||||| ||||||    
T  4638163 tcgattcccaggagaaacaacgcttgaccagtgcgcatacctctacgcacgagccggattagtagcccacctttaatgggtcggaaaccgatgcgaa 4638259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 314
Target Start/End: Original strand, 33251634 - 33251770
Alignment:
Q  178 gagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagt 277  Q
    ||||| ||| |||||||||||  | | ||||||||| |||||| || | || ||||||  |||  ||||| ||||| ||||| |||||||||||||||||    
T  33251634 gagctccttccaaggacgtattaggggaataccgggttcgattcccggtgggaacaacgtttggccagtgtgcatgcctctacgcatgagccggattagt 33251733  T
Q  278 cgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||||  ||| ||||||| ||||  ||||||||||    
T  33251734 cgtccacatttgatgggtcgaaaacgagtgcgaaagc 33251770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 314
Target Start/End: Original strand, 44064584 - 44064652
Alignment:
Q  246 tgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||||| ||||| |||||| ||||||||||||  |||| |||||||||||||||||||||| |||||    
T  44064584 tgcgcatgcctctacgcatgaaccggattagtcgctcacctttggtgggtcggaaaccggtgcaaaagc 44064652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 176 - 300
Target Start/End: Complemental strand, 52364937 - 52364813
Alignment:
Q  176 aggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatta 275  Q
    ||||||| ||| |||||||||| ||| | ||||||| | |||||| ||||  | |||||| ||||| ||||||||||| ||||| ||| |||| ||||||    
T  52364937 aggagctccttccaaggacgtacccggggaataccgagttcgattcccagaaggaacaacgcttgaccagtgcgcatgcctctacgcacgagctggatta 52364838  T
Q  276 gtcgtccaccattggtgggtcggaa 300  Q
     ||||| ||| ||| ||||||||||    
T  52364837 atcgtctacctttgatgggtcggaa 52364813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 301
Target Start/End: Complemental strand, 24146411 - 24146340
Alignment:
Q  230 aacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaa 301  Q
    ||||||||||| ||| | |||||| |||||  ||||||||| |||||||||||||||||| |||||||||||    
T  24146411 aacaacacttggtcaatacgcatgcctctagacatgagccgaattagtcgtccaccattgatgggtcggaaa 24146340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 205 - 311
Target Start/End: Original strand, 8362576 - 8362682
Alignment:
Q  205 aataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccg 304  Q
    ||||||||| || ||| |||| |||||||||  |||  |||| |||||| ||||| |||||||||  |||||||||||||| || |||| || |||||||    
T  8362576 aataccgggttcaattcccagtggaaacaacgtttggccagtccgcatgcctctacgcatgagccaaattagtcgtccacctttagtggatccgaaaccg 8362675  T
Q  305 gtgcgaa 311  Q
    |||||||    
T  8362676 gtgcgaa 8362682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 8683291 - 8683250
Alignment:
Q  262 catgagccggattagtcgtccaccattggtgggtcggaaacc 303  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  8683291 catgagccggattagtcgtccacctttggtgggtcggaaacc 8683250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 314
Target Start/End: Complemental strand, 26362063 - 26361966
Alignment:
Q  217 gatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||| ||| ||| ||||||  ||| |||||| ||||| ||||| ||| |||||||||||||||  |||| ||| ||||||||||||||||| ||||||    
T  26362063 gattcccaaggggaacaacgtttggtcagtgtgcatgcctctacgcacgagccggattagtcgcacacctttgatgggtcggaaaccggtgtgaaagc 26361966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 245 - 302
Target Start/End: Complemental strand, 45402419 - 45402362
Alignment:
Q  245 gtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaac 302  Q
    ||||||||| ||||| |||||||||||||||||||| |||| || |||||||||||||    
T  45402419 gtgcgcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaac 45402362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 314
Target Start/End: Complemental strand, 50753405 - 50753340
Alignment:
Q  249 gcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||| ||||| ||| ||| |||||||||||| || |||||||||||||||||||||||| |||||    
T  50753405 gcatgcctctacgcacgagtcggattagtcgttcatcattggtgggtcggaaaccggtgcaaaagc 50753340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 313
Target Start/End: Original strand, 13367448 - 13367531
Alignment:
Q  230 aacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    |||||| |||| |||||| ||||| || || ||||||||||||||||||  | ||| ||| ||||| |||||||||||||||||    
T  13367448 aacaacgcttggtcagtgtgcatgcctttacgcatgagccggattagtcacctaccgttgttgggtaggaaaccggtgcgaaag 13367531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 26923399 - 26923260
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||||||| |||||||   || |||| |||  |||||||  |||| |||||||  ||||||||||||||||  | ||  || ||| ||||||    
T  26923399 aaggagctcctttcaatgacgtatttaaggaatatcggattcgatttttagggaaaacaacgtttgatcagtgcgcatgcatatacacacgagtcggatt 26923300  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    | | |||||  ||||||||||| |||||||||||||||||    
T  26923299 aattgtccattattggtgggtcagaaaccggtgcgaaagc 26923260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 303
Target Start/End: Original strand, 32522005 - 32522076
Alignment:
Q  232 caacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaacc 303  Q
    |||||||||| | |||||||||| | || ||||||| | ||||||||||||||| ||| |||||||||||||    
T  32522005 caacacttgaccggtgcgcatgtatttacgcatgagtcagattagtcgtccacctttgatgggtcggaaacc 32522076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 314
Target Start/End: Complemental strand, 55069749 - 55069678
Alignment:
Q  243 cagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||| |||| ||||| ||| ||||||||||| |||  |||| |||||||||||||||||||||| |||||    
T  55069749 cagtgcacatgcctctacgcacgagccggattaatcgctcacctttggtgggtcggaaaccggtgcaaaagc 55069678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 314
Target Start/End: Original strand, 2668083 - 2668169
Alignment:
Q  228 gaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||||||||||  ||||||||||| ||||| ||| |||| ||||||||||  |||| || |||||| ||||| | ||||||||||    
T  2668083 gaaacaacacttggccagtgcgcatgcctctacgcaagagctggattagtcgctcacctttagtgggttggaaatcagtgcgaaagc 2668169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 314
Target Start/End: Original strand, 10043720 - 10043790
Alignment:
Q  244 agtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||| |||| ||||| ||| ||| | ||||| |||  |||||||||||||||||||||||||||||||||    
T  10043720 agtgcacatgcctctacgcacgaggcagattaatcgctcaccattggtgggtcggaaaccggtgcgaaagc 10043790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 313
Target Start/End: Complemental strand, 20948191 - 20948061
Alignment:
Q  183 tctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtcc 282  Q
    |||||||| || |||| ||| |||||| ||| |||||| |||  || ||||||| |||| ||||| ||||| ||||||||| || |  |||||||||| |    
T  20948191 tctttcaaagatgtattcgaaaaatactgggttcgattaccaaagggaacaacatttgaccagtgtgcatgcctctatgcacgaacgagattagtcgttc 20948092  T
Q  283 accattggtgggtcggaaaccggtgcgaaag 313  Q
    ||| ||||| | ||| ||| |||||||||||    
T  20948091 accgttggtagatcgaaaatcggtgcgaaag 20948061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 296
Target Start/End: Original strand, 40944856 - 40944972
Alignment:
Q  179 agcttctttcaaggacgtatccgaga-aataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagt 277  Q
    |||| ||| ||||||||||||| ||| ||||||| | |||||| ||||||| |||||||||| | ||||  ||||| ||||| |||||||| ||||||||    
T  40944856 agctccttccaaggacgtatcc-agagaataccgagttcgattcccagggggaacaacacttaaccagtatgcatgcctctacgcatgagc-ggattagt 40944953  T
Q  278 cgtccaccattggtgggtc 296  Q
    ||  |||| ||||||||||    
T  40944954 cgctcacctttggtgggtc 40944972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 314
Target Start/End: Original strand, 8164552 - 8164661
Alignment:
Q  205 aataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccg 304  Q
    ||||||||| || ||||| | ||| |||||| ||||  ||||||||||| || || ||| ||| ||||||||||| ||||| ||||||| ||||||| ||    
T  8164552 aataccgggttcaatttctaaggggaacaacgcttggccagtgcgcatgcctttacgcacgagtcggattagtcgcccacctttggtggatcggaaatcg 8164651  T
Q  305 gtgcgaaagc 314  Q
    | | ||||||    
T  8164652 gcgtgaaagc 8164661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 308
Target Start/End: Complemental strand, 22405681 - 22405548
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||  ||| |||||||||| ||||||||||  || |||  |||| | |||||| ||| | || |||| ||| || |||||| ||||||||||    
T  22405681 aaggagctcctaccaatgacgtatccgtgaaataccggattctattctcaggaggaacaacgcttaaccaatgcgaatgcctttatgcacgagccggatt 22405582  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgc 308  Q
    | ||||||| | |||||| |||||||||| ||||    
T  22405581 aatcgtccatctttggtgcgtcggaaaccagtgc 22405548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 313
Target Start/End: Original strand, 22909833 - 22909890
Alignment:
Q  256 tctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    |||| |||||||||| ||||||||| |||| ||| ||||||||||||| |||||||||    
T  22909833 tctacgcatgagccgaattagtcgtgcacctttgatgggtcggaaaccagtgcgaaag 22909890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 266 - 311
Target Start/End: Original strand, 50682525 - 50682570
Alignment:
Q  266 agccggattagtcgtccaccattggtgggtcggaaaccggtgcgaa 311  Q
    |||||||||||||||||||||||| | ||| |||||||||||||||    
T  50682525 agccggattagtcgtccaccattgataggttggaaaccggtgcgaa 50682570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 314
Target Start/End: Original strand, 7648757 - 7648848
Alignment:
Q  223 caggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||| ||||||  |||| ||||||||||  ||||| ||| ||||||||||||||| ||||| ||| ||||||| || ||  |||||||||    
T  7648757 cagggggaacaacgtttgaccagtgcgcatacctctacgcacgagccggattagtcgcccacctttgttgggtcgaaatccaatgcgaaagc 7648848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 255 - 314
Target Start/End: Original strand, 19873421 - 19873480
Alignment:
Q  255 ctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||| ||| ||||||||||||||||||| | || ||||||||||||| ||||| |||||    
T  19873421 ctctacgcacgagccggattagtcgtccatcttttgtgggtcggaaactggtgcaaaagc 19873480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 312
Target Start/End: Complemental strand, 11393526 - 11393476
Alignment:
Q  262 catgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 312  Q
    |||||||| ||||||||||||||| ||| | |||||||||||| |||||||    
T  11393526 catgagccagattagtcgtccacctttgattggtcggaaaccgatgcgaaa 11393476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 44
Target Start/End: Complemental strand, 25959463 - 25959433
Alignment:
Q  14 ttgtatcaaatggttgttcaaatatcattgc 44  Q
    |||||||||||||||||||||||||||||||    
T  25959463 ttgtatcaaatggttgttcaaatatcattgc 25959433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 286
Target Start/End: Original strand, 7139735 - 7139832
Alignment:
Q  189 aaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccacca 286  Q
    ||||||||||||  | ||||||||| |||||| |||| || |||| ||||||| |||||  ||| |||||| ||| |||| |||||| ||| ||||||    
T  7139735 aaggacgtatccagggaataccgggttcgattcccagagggaacatcacttgaccagtgtacatatctctacgcacgagctggattaatcgcccacca 7139832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 314
Target Start/End: Original strand, 21325123 - 21325172
Alignment:
Q  265 gagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||| ||| ||| | ||| ||||||||||||||||||||||||    
T  21325123 gagccggattaatcgcccatctttgatgggtcggaaaccggtgcgaaagc 21325172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 279
Target Start/End: Original strand, 10855381 - 10855457
Alignment:
Q  203 gaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcg 279  Q
    ||||||||||| | |||||||||||| |||||| ||||  |||| |||||| ||||| ||| || ||| ||||||||    
T  10855381 gaaataccgggtttgatttccagggggaacaacgcttggccagtacgcatgcctctacgcacgaaccgaattagtcg 10855457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 314
Target Start/End: Complemental strand, 29195370 - 29195318
Alignment:
Q  262 catgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||| || ||||||||||||||| || |||||| |||||||||| |||||||    
T  29195370 catgaaccagattagtcgtccacctttagtgggttggaaaccggtacgaaagc 29195318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 42
Target Start/End: Original strand, 46473278 - 46473306
Alignment:
Q  14 ttgtatcaaatggttgttcaaatatcatt 42  Q
    |||||||||||||||||||||||||||||    
T  46473278 ttgtatcaaatggttgttcaaatatcatt 46473306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 314
Target Start/End: Complemental strand, 52168621 - 52168569
Alignment:
Q  262 catgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||||||||||| ||| |||| ||||||| |||||| ||| |||||    
T  52168621 catgagccggattagtcgttcacaattgatgggtcgaaaaccgatgctaaagc 52168569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 100; Significance: 2e-49; HSPs: 79)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 26325782 - 26325921
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| |||||||||||||||||||| |||| |||| |||||| |||| || ||||||||||| |||||||||||| ||||| ||||||||||||||    
T  26325782 aaggagctcctttcaaggacgtatccgaggaatatcgggttcgattcccagcgggaacaacacttggtcagtgcgcatgcctctacgcatgagccggatt 26325881  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  26325882 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 26325921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 41663994 - 41663855
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| |||  ||||||||||||| | ||||||||| |||||| ||||||| ||||||||||| |||||||||||| ||||| |||||||| |||||    
T  41663994 aaggagctccttctaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggtcagtgcgcatgcctctacgcatgagctggatt 41663895  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  41663894 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 41663855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 49078084 - 49078223
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| |||  ||||||||||||| | ||||||||| |||||| |||||||||||||||||||  ||||||||||| ||||| ||||||||||||||    
T  49078084 aaggagctccttctaaggacgtatccggggaataccgggttcgattcccaggggaaacaacacttggccagtgcgcatgcctctacgcatgagccggatt 49078183  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||| |||||||||| ||||||||||||||||||||||    
T  49078184 agtcgttcaccattggtaggtcggaaaccggtgcgaaagc 49078223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 176 - 314
Target Start/End: Complemental strand, 50503498 - 50503360
Alignment:
Q  176 aggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatta 275  Q
    ||||||| |||||||||||||||||| | |||| |||| |||||| ||||||| |||||||||||| ||||||||||| ||||| ||| ||||||||||     
T  50503498 aggagctcctttcaaggacgtatccggggaatatcgggttcgattcccagggggaacaacacttgaccagtgcgcatgcctctacgcacgagccggattt 50503399  T
Q  276 gtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||| |||||| ||||||||||||||||| |||||||||    
T  50503398 gtcgcccaccaatggtgggtcggaaaccgatgcgaaagc 50503360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 8763961 - 8764100
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||| ||| | |||| |||| ||| || ||||||| |||||||||||  ||||||||||| ||||| ||| ||||||||||    
T  8763961 aaggagctccttccaaggacgtacccggggaatatcgggttcgtttcccagggggaacaacacttggccagtgcgcatgcctctacgcacgagccggatt 8764060  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  8764061 agtcgtccaccgttggtgggtcggaaaccggtgcgaaagc 8764100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 18915837 - 18915976
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||||||| |||||||||| ||| | ||||||||| |||||| ||||||| |||||||||||  ||||| ||||| ||||| ||| ||||||||||    
T  18915837 aaggagcttcttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtgtgcatgcctctacgcacgagccggatt 18915936  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||  |||||||||||||| ||||||||||||||||||    
T  18915937 agtcgctcaccattggtgggttggaaaccggtgcgaaagc 18915976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 10422758 - 10422897
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| ||| ||||||| || | ||||||||| |||||||| ||| | |||||||||||  ||||||||||| ||||| ||||||||||||||    
T  10422758 aaggagctccttccaatgacgtattcggggaataccgggttcgatttctaggaggaacaacacttggccagtgcgcatgcctctacgcatgagccggatt 10422857  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||| |||||  |||||||||||||||||||||    
T  10422858 agtcgtccacctttggtaagtcggaaaccggtgcgaaagc 10422897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 17642142 - 17642003
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| || ||||||| ||  ||||||| ||| |||||| ||||||| |||||||||||  ||||||||||| ||||| ||| ||||||||||    
T  17642142 aaggagctccttccacggacgtacccaggaaatactgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcacgagccggatt 17642043  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||| |||||||||||||||| |||||||||||    
T  17642042 agtcgtccacctttggtgggtcggaaactggtgcgaaagc 17642003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 192 - 314
Target Start/End: Original strand, 26660125 - 26660246
Alignment:
Q  192 gacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggt 291  Q
    ||||||| || | ||||||||| |||||||||| ||| ||||||| ||||||||| |||||| ||||| ||||||||||||||||||| ||||| |||||    
T  26660125 gacgtattcggggaataccgggttcgatttccacggggaacaacatttgatcagtacgcatgcctctacgcatgagccggattagtcg-ccacctttggt 26660223  T
Q  292 gggtcggaaaccggtgcgaaagc 314  Q
    |||||||||||||||||||||||    
T  26660224 gggtcggaaaccggtgcgaaagc 26660246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 176 - 313
Target Start/End: Complemental strand, 33004152 - 33004015
Alignment:
Q  176 aggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatta 275  Q
    ||||||| ||| |||||||||||||| | |||| |||  ||||||||||||||||||||  ||||  ||||||||||| ||||| ||| |||||||||||    
T  33004152 aggagctccttccaaggacgtatccggggaatatcggattcgatttccaggggaaacaatgcttggccagtgcgcatgcctctacgcacgagccggatta 33004053  T
Q  276 gtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    |||  |||||| |||||||||| |||||||||||||||    
T  33004052 gtcacccaccaatggtgggtcgaaaaccggtgcgaaag 33004015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 5855492 - 5855631
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| ||||||||||| || | ||||||||| |||||| ||||| | |||||| ||||  ||||||||||| ||||| ||||||| ||||||    
T  5855492 aaggagctccttccaaggacgtattcggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgaggcggatt 5855591  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||| |||| || ||||||||||||||| |||||||||    
T  5855592 agtcgttcacctttagtgggtcggaaaccgatgcgaaagc 5855631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 30927865 - 30927726
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||| | | |||||| |||| ||||||||||| || |||||| ||||  || || ||||| ||||| ||||||||||||||    
T  30927865 aaggagctccttccaaggacgtacctgggaaatatcgggttcgatttccagagggaacaacgcttggccaatgtgcatgcctctacgcatgagccggatt 30927766  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||  |||||||||| ||||||||||| |||||    
T  30927765 agtcgtccacttttggtgggtcagaaaccggtgcaaaagc 30927726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 205 - 314
Target Start/End: Complemental strand, 9659286 - 9659178
Alignment:
Q  205 aataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccg 304  Q
    ||||||||| |||||| ||||||||| ||||  ||||  |||||||||| || || ||||||||||||||||||||||||| ||||||||| ||||||||    
T  9659286 aataccgggttcgattcccaggggaa-caacgtttgactagtgcgcatgcctttacgcatgagccggattagtcgtccacctttggtgggttggaaaccg 9659188  T
Q  305 gtgcgaaagc 314  Q
    ||||||||||    
T  9659187 gtgcgaaagc 9659178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 184 - 313
Target Start/End: Original strand, 16263524 - 16263653
Alignment:
Q  184 ctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtcca 283  Q
    |||||||||||||||| | | |||||| || |||||||||||| | |||||| ||||  ||||||||||| ||||| |||| ||||||| ||||||||||    
T  16263524 ctttcaaggacgtatctggggaataccaggttcgatttccaggaggaacaacgcttggccagtgcgcatgcctctacgcataagccggaatagtcgtcca 16263623  T
Q  284 ccattggtgggtcggaaaccggtgcgaaag 313  Q
    |  ||| ||| |||||||||||||||||||    
T  16263624 cttttgatggatcggaaaccggtgcgaaag 16263653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 32151060 - 32150921
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| ||||||||| | |||| |||| | || |||||||||||||| ||||||| ||| |||||||||||| || || |||||||||| |||    
T  32151060 aaggagctccttccaaggacgttttcgaggaatatcaggttcgatttccagggggaacaacatttggtcagtgcgcatgcctttacgcatgagccgaatt 32150961  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||  |||| ||| ||||||| |||||| |||||||||    
T  32150960 agtcgctcacctttgatgggtcgaaaaccgatgcgaaagc 32150921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 205 - 314
Target Start/End: Original strand, 35908757 - 35908865
Alignment:
Q  205 aataccggggtcgatttccaggggaaacaacactt-gatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaacc 303  Q
    ||||||||  |||||||  ||||| |||||||||| | |||||||||||| ||||| |||||||||||||||||||||||||||  ||||||||||||||    
T  35908757 aataccggattcgatttttagggggaacaacactttggtcagtgcgcatgcctctacgcatgagccggattagtcgtccaccat--gtgggtcggaaacc 35908854  T
Q  304 ggtgcgaaagc 314  Q
    ||||| |||||    
T  35908855 ggtgcaaaagc 35908865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 45362020 - 45361881
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||| ||  | ||||||||| ||||||  |||| | |||||| ||||  ||||||||||| | ||| |||| |||||||||    
T  45362020 aaggagctccttccaaggacgtaccctgggaataccgggttcgattctcaggaggaacaacgcttggccagtgcgcatgccactacgcataagccggatt 45361921  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||| |||| || |||||||||||||||||||||||||    
T  45361920 agtcgttcacctttagtgggtcggaaaccggtgcgaaagc 45361881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 223 - 313
Target Start/End: Original strand, 5504049 - 5504139
Alignment:
Q  223 caggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    ||||| ||||||| |||||| ||||| |||| ||||| ||||||||||||||||||||||||| ||| |||||||||||||||| ||||||    
T  5504049 cagggaaaacaacgcttgattagtgcacatgcctctacgcatgagccggattagtcgtccacctttgatgggtcggaaaccggtacgaaag 5504139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 175 - 304
Target Start/End: Original strand, 10336486 - 10336615
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| ||| ||||||||||   |||| |||| ||||||| |||||| |||||| ||||| ||||||||||| ||||| ||||||||||||||    
T  10336486 aaggagctccttccaaagacgtatccggagaatatcgggttcgattttcagggggaacaacgcttgaccagtgcgcatgcctctacgcatgagccggatt 10336585  T
Q  275 agtcgtccaccattggtgggtcggaaaccg 304  Q
    | ||||||||| ||| ||| ||| ||||||    
T  10336586 aatcgtccacctttgatggatcgaaaaccg 10336615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 205 - 314
Target Start/End: Complemental strand, 32142954 - 32142845
Alignment:
Q  205 aataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccg 304  Q
    ||||||||| ||||||| |||||| |||||||||||  ||||||||||| || || |||||||||| ||||||||  |||| ||| ||||||||||||||    
T  32142954 aataccgggttcgattttcagggggaacaacacttggccagtgcgcatgcctttacgcatgagccgaattagtcgctcacctttgatgggtcggaaaccg 32142855  T
Q  305 gtgcgaaagc 314  Q
     |||||||||    
T  32142854 atgcgaaagc 32142845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 2981069 - 2980930
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| || ||||||||||| | ||||| ||| |||||| |||| || |||||||||||  ||||| ||||| ||||| ||| ||| ||||||    
T  2981069 aaggagctccttccagggacgtatccggggaatactgggttcgattcccagcgggaacaacacttggccagtgtgcatgcctctacgcacgagtcggatt 2980970  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||||||   || |||||||||||| ||||||||||||    
T  2980969 agtcgtccatgtttagtgggtcggaaatcggtgcgaaagc 2980930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 243 - 314
Target Start/End: Complemental strand, 4581752 - 4581681
Alignment:
Q  243 cagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||| ||||| ||| |||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  4581752 cagtgcgcatgcctctacgcacgagccggaatagtcgtccacctttggtgggtcggaaaccggtgcgaaagc 4581681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 11398026 - 11397888
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||| |||||||   ||||||||| |||||| | ||||||| ||||  |||  || |||| ||| ||||| ||||||| ||||||    
T  11398026 aaggagctccttccaaggatgtatccggagaataccgggttcgattccgaggggaa-caacgtttggccaatgcgtatgcctctacgcatgagtcggatt 11397928  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||| ||||||||||||||| ||||||||||||    
T  11397927 agtcgtccacctttggtgggtcggaaatcggtgcgaaagc 11397888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 188 - 303
Target Start/End: Complemental strand, 14254393 - 14254278
Alignment:
Q  188 caaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccat 287  Q
    ||||||||||| || | ||||||| | ||||||| |||||| |||||| ||||  |||| |||||| || || ||||||||||||||||||||||||| |    
T  14254393 caaggacgtattcggggaataccgagttcgattttcagggggaacaacgcttggccagtacgcatgcctttacgcatgagccggattagtcgtccacctt 14254294  T
Q  288 tggtgggtcggaaacc 303  Q
    || |||||||||||||    
T  14254293 tgatgggtcggaaacc 14254278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 16956436 - 16956575
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||| ||| | ||||||| | ||| ||  |||||| ||||||  |||| ||||||||||| ||||| ||| ||||||||||    
T  16956436 aaggagctccttccaaggacgtacccggggaataccgtgttcggttctcaggggtaacaacgtttgaccagtgcgcatgcctctacgcacgagccggatt 16956535  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||   |||| ||||||||||||||||| ||||||||||    
T  16956536 agtcactcacctttggtgggtcggaaaccagtgcgaaagc 16956575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 43959959 - 43959820
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||| ||| ||| ||| |||||| ||| | |||| |||| || ||| ||||||| |||||| ||||  ||||||||||| ||||| ||| ||||||||||    
T  43959959 aaggtgctccttccaatgacgtacccggggaatatcgggttcaattcccagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggatt 43959860  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||| ||||| || |||| ||||||||||||||||||||    
T  43959859 agtcgcccacctttagtggatcggaaaccggtgcgaaagc 43959820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 175 - 278
Target Start/End: Complemental strand, 48798208 - 48798105
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| ||| |||||||||| | |||| |||| |||||||||||||| |||||| |||||  |||||||||| ||||| ||||||||||||||    
T  48798208 aaggagctccttccaatgacgtatccggggaatatcgggttcgatttccagggggaacaacgcttgactagtgcgcatgcctctacgcatgagccggatt 48798109  T
Q  275 agtc 278  Q
    ||||    
T  48798108 agtc 48798105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 178 - 314
Target Start/End: Original strand, 51437442 - 51437566
Alignment:
Q  178 gagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagt 277  Q
    ||||| |||||||||||||||||||| |||| |||| |||||| ||| ||| |||||| ||||| ||||||||||            |||||||||||||    
T  51437442 gagctcctttcaaggacgtatccgaggaatatcgggttcgattcccatggggaacaacgcttgaccagtgcgcat------------gagccggattagt 51437529  T
Q  278 cgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    | |||||| ||||||||||||||||||||||||||||    
T  51437530 catccacctttggtgggtcggaaaccggtgcgaaagc 51437566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 175 - 313
Target Start/End: Original strand, 14357725 - 14357863
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||| ||||| |||||||||||| |  ||||| | || ||||||||||   ||||||||  |||| ||||||||||| ||||| ||| || |||||||    
T  14357725 aaggagtttcttccaaggacgtatctggaaaatatcaggttcgatttccaattgaaacaacgtttgaccagtgcgcatgcctctacgcacgaaccggatt 14357824  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    | ||||  ||||||| |||||||||||||||||||||||    
T  14357825 aatcgtttaccattgatgggtcggaaaccggtgcgaaag 14357863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 193 - 314
Target Start/End: Original strand, 44969653 - 44969773
Alignment:
Q  193 acgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtg 292  Q
    ||||| |||||||||||| || ||||||  |||| ||| |||| ||||  ||||| ||||| | ||| ||||||||||||||||||||||| ||||||||    
T  44969653 acgtacccgagaaataccaggttcgattctcaggagaa-caacgcttggccagtgtgcatgcccctacgcatgagccggattagtcgtccatcattggtg 44969751  T
Q  293 ggtcggaaaccggtgcgaaagc 314  Q
    | ||||||||||||| ||||||    
T  44969752 gatcggaaaccggtgtgaaagc 44969773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 188 - 313
Target Start/End: Complemental strand, 45726558 - 45726433
Alignment:
Q  188 caaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccat 287  Q
    |||||||||| ||||| |||||| || ||||||  |||| | || |||| |||  ||||||| ||||||||| |||||||||||||||||||| |||| |    
T  45726558 caaggacgtacccgaggaatacctggttcgattctcaggaggaataacatttggccagtgcgtatgtctctacgcatgagccggattagtcgttcacctt 45726459  T
Q  288 tggtgggtcggaaaccggtgcgaaag 313  Q
    |||||| ||||| || ||||||||||    
T  45726458 tggtggatcggagactggtgcgaaag 45726433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 230 - 314
Target Start/End: Complemental strand, 10173054 - 10172970
Alignment:
Q  230 aacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||| ||||  |||||| |||| ||||| ||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||    
T  10173054 aacaacgcttggccagtgcccatgcctctacgcatgagccggattactcgcccacctttggtgggtcggaaaccggtgcgaaagc 10172970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 175 - 303
Target Start/End: Complemental strand, 33418253 - 33418125
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| ||| |||||| |||   ||||||||  |||||| | |||||  ||||| ||||  ||||||||||| ||||||||| ||||||||||    
T  33418253 aaggagctccttccaaagacgtacccggagaataccggattcgattcctaggggggacaacgcttggccagtgcgcatgcctctatgcacgagccggatt 33418154  T
Q  275 agtcgtccaccattggtgggtcggaaacc 303  Q
    ||||||||||| ||||| |||||||||||    
T  33418153 agtcgtccacctttggtcggtcggaaacc 33418125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 204 - 304
Target Start/End: Complemental strand, 42710247 - 42710147
Alignment:
Q  204 aaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaacc 303  Q
    ||||| |||| ||||||| |||||||||||| |||||  ||||||||||| ||||| |||| | ||| |||||||||||||||||||| | |||||||||    
T  42710247 aaatatcgggttcgattttcaggggaaacaatacttggccagtgcgcatgcctctacgcataaaccgaattagtcgtccaccattggtagatcggaaacc 42710148  T
Q  304 g 304  Q
    |    
T  42710147 g 42710147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 892435 - 892301
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||||||||||||||| || | ||||||||| |||||| | ||||| ||||||||||   || || ||||| |     ||||||||||||||    
T  892435 aaggagctcctttcaaggacgtattcggggaataccgggttcgattcctagggggaacaacacttagccaatgtgcatgcc-----gcatgagccggatt 892341  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||| ||||| ||||||| ||||||| ||||||||||||    
T  892340 agtcgcccacctttggtggatcggaaatcggtgcgaaagc 892301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 179 - 310
Target Start/End: Complemental strand, 17092611 - 17092480
Alignment:
Q  179 agcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtc 278  Q
    |||| |||||| |||||||| || |||||| || | ||||||| |||||||||||||  |||  ||||| | ||| ||||| ||| ||||||||||||||    
T  17092611 agctcctttcatggacgtattcgggaaatatcgagttcgattttcaggggaaacaacgattggccagtgtgtatgcctctacgcacgagccggattagtc 17092512  T
Q  279 gtccaccattggtgggtcggaaaccggtgcga 310  Q
    ||||||| ||||| | || |||||||||||||    
T  17092511 gtccacctttggtagatcagaaaccggtgcga 17092480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 314
Target Start/End: Original strand, 37339802 - 37339929
Alignment:
Q  188 caaggacgtatccgagaaataccggggtcgatttccaggggaa-acaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccacca 286  Q
    |||||| ||| ||| | ||||||||| |||||| |||||||   ||||| ||||  ||||||||||| ||| | ||| ||||||||||||||| |||||     
T  37339802 caaggatgtacccggggaataccgggttcgattcccagggggggacaacgcttggccagtgcgcatgcctcaacgcacgagccggattagtcgcccacct 37339901  T
Q  287 ttggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||| ||||||||||||||||||    
T  37339902 ttggtgggttggaaaccggtgcgaaagc 37339929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 175 - 313
Target Start/End: Original strand, 2567246 - 2567384
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| ||||||||||| ||   ||||||||| ||||||| | ||| ||||||| ||||  ||||||||||| |||||  || ||| | ||||    
T  2567246 aaggagctccttccaaggacgtattcggagaataccgggttcgattttcggggaaaacaacgcttggccagtgcgcatgcctctactcacgagtcagatt 2567345  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    || |||||| | |||||||||||||||||||| ||||||    
T  2567346 agccgtccatctttggtgggtcggaaaccggtacgaaag 2567384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 188 - 314
Target Start/End: Complemental strand, 12744648 - 12744522
Alignment:
Q  188 caaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccat 287  Q
    |||||||||||| ||| |||| | |  ||||||| |||||| |||||| |||||  |||||||||||||||| |||||||||| ||||||||  |||  |    
T  12744648 caaggacgtatctgaggaatatcagattcgattttcagggggaacaacgcttgactagtgcgcatgtctctacgcatgagccgaattagtcgctcactgt 12744549  T
Q  288 tggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||| ||||| | |||||||||    
T  12744548 tggtgggtcagaaacagatgcgaaagc 12744522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 188 - 314
Target Start/End: Complemental strand, 12755638 - 12755512
Alignment:
Q  188 caaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccat 287  Q
    |||||||||||| ||| |||| | |  ||||||| |||||| |||||| |||||  |||||||||||||||| |||||||||| ||||||||  |||  |    
T  12755638 caaggacgtatctgaggaatatcagattcgattttcagggggaacaacgcttgactagtgcgcatgtctctacgcatgagccgaattagtcgctcactgt 12755539  T
Q  288 tggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||| ||||| | |||||||||    
T  12755538 tggtgggtcagaaacagatgcgaaagc 12755512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 205 - 278
Target Start/End: Complemental strand, 28324688 - 28324615
Alignment:
Q  205 aataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtc 278  Q
    |||| |||| |||||| || |||||||||||||||| |||||||||||| ||||| ||||||||||||||||||    
T  28324688 aatatcgggttcgattccccggggaaacaacacttggtcagtgcgcatgcctctacgcatgagccggattagtc 28324615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 314
Target Start/End: Original strand, 50094937 - 50095013
Alignment:
Q  238 ttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||| |||| ||||||  |||| ||||||| |||||||||||||||||||| ||||||||||||||||||| |||||    
T  50094937 ttgaccagtacgcatgcttctacgcatgagtcggattagtcgtccaccattagtgggtcggaaaccggtgcaaaagc 50095013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 9853415 - 9853276
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||| ||| |||  |||||||||| |||||| | ||||||||||||  || | ||||||||||| |||||  || || || ||||    
T  9853415 aaggagctccttccaaggatgtacccggaaaataccgggttcgattcctaggggaaacaacgttttaccagtgcgcatgcctctacacacgaaccagatt 9853316  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    | ||||||||| |||||||||| |||| |||||| |||||    
T  9853315 aatcgtccacctttggtgggtcagaaatcggtgcaaaagc 9853276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 17389742 - 17389880
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||||||| ||||| |||| |||||| |||  ||||||| | |||||| |||   |||| ||||||||||| ||| | |||||||| |||||    
T  17389742 aaggagctcctttcaatgacgtttccgggaaatatcggattcgattttcgggggaa-caatgtttgaccagtgcgcatgcctccacgcatgagctggatt 17389840  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||||||    || ||||||||||||||||||||||||    
T  17389841 agtcgtccattgctgatgggtcggaaaccggtgcgaaagc 17389880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 178 - 313
Target Start/End: Complemental strand, 18649487 - 18649352
Alignment:
Q  178 gagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagt 277  Q
    ||||| ||| |||||||||||| |   |||| |||| ||||||| |||||| |||||| ||||| ||||||||||| ||||| | | ||||| ||||| |    
T  18649487 gagctccttccaaggacgtatctggagaatatcgggttcgattttcagggggaacaacgcttgaccagtgcgcatgcctctacgtacgagccagattaat 18649388  T
Q  278 cgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    || ||||| || |||| | |||||||||||||||||    
T  18649387 cgcccacctttagtggattggaaaccggtgcgaaag 18649352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 34719746 - 34719885
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||| | | | ||||| ||| |||||| |||  || || ||| ||||| ||||||||||| ||||| ||| ||| | ||||    
T  34719746 aaggagctccttccaaggacgtacctggggaatactgggttcgattcccactgggaataacgcttgaccagtgcgcatgcctctacgcacgagtcagatt 34719845  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||  |||| |||||||||||||||| |||||||||||    
T  34719846 agtcgctcacctttggtgggtcggaaactggtgcgaaagc 34719885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 40288615 - 40288476
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    ||||||||  || ||||||||||| || | ||||||||| |||||||||||||| ||||||  |||  ||||  ||||| |||||  || ||||||||||    
T  40288615 aaggagctctttccaaggacgtattcggggaataccgggttcgatttccagggggaacaacggttggccagtatgcatgcctctacacacgagccggatt 40288516  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||  || | ||||||||||||||||| |||| |||||    
T  40288515 agtcgctcatccttggtgggtcggaaaccagtgcaaaagc 40288476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 314
Target Start/End: Original strand, 15465948 - 15466074
Alignment:
Q  188 caaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccat 287  Q
    |||||||||||  | | |||||| || |||||||||||||| |||||| |||| ||||||| |||| ||||| ||| ||| | |||| ||||  |||| |    
T  15465948 caaggacgtatttggggaataccaggttcgatttccagggggaacaacgcttggtcagtgcacatgcctctacgcacgagtctgattggtcgctcacctt 15466047  T
Q  288 tggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||||||||| | |||||||    
T  15466048 tggtgggtcggaaaccgatacgaaagc 15466074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 314
Target Start/End: Complemental strand, 33498948 - 33498838
Alignment:
Q  204 aaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaacc 303  Q
    |||||||||| ||||||  |||| | | |||| ||||  ||||||||||| ||||| ||||||||||||||||||||||||| ||| ||| ||| ||| |    
T  33498948 aaataccgggttcgattctcaggaggagcaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttgatggatcgtaaagc 33498849  T
Q  304 ggtgcgaaagc 314  Q
    ||| |||||||    
T  33498848 ggtacgaaagc 33498838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 248 - 314
Target Start/End: Complemental strand, 35211237 - 35211171
Alignment:
Q  248 cgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||| ||||| |||||||| | |||||||||||||| ||||||||||||||||||||| ||||||    
T  35211237 cgcatgcctctacgcatgagctgaattagtcgtccacctttggtgggtcggaaaccggtgtgaaagc 35211171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 205 - 314
Target Start/End: Original strand, 13262083 - 13262192
Alignment:
Q  205 aataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccg 304  Q
    ||||||||| |||||||||||||  ||||||  ||| ||| | |||||||||||| ||| ||| |||||||||||||||||||||  || ||| ||||||    
T  13262083 aataccgggttcgatttccagggagaacaacgtttggtcaatacgcatgtctctacgcacgagtcggattagtcgtccaccattgaaggatcgaaaaccg 13262182  T
Q  305 gtgcgaaagc 314  Q
     |||| ||||    
T  13262183 atgcggaagc 13262192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 255 - 303
Target Start/End: Original strand, 10507748 - 10507796
Alignment:
Q  255 ctctatgcatgagccggattagtcgtccaccattggtgggtcggaaacc 303  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  10507748 ctctacgcatgagccggattagtcgtccaccactggtgggtcggaaacc 10507796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 189 - 313
Target Start/End: Complemental strand, 31576671 - 31576547
Alignment:
Q  189 aaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccatt 288  Q
    ||||||||||||   |||||||||| ||||||  ||||||||||||  ||||  || ||||  || ||||| ||||||||||| ||||||||||| | ||    
T  31576671 aaggacgtatcccgaaaataccgggttcgattctcaggggaaacaatgcttggccaatgcgtgtgcctctacgcatgagccggcttagtcgtccatcttt 31576572  T
Q  289 ggtgggtcggaaaccggtgcgaaag 313  Q
    | || ||||||||||||||| ||||    
T  31576571 gatgtgtcggaaaccggtgcaaaag 31576547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 313
Target Start/End: Complemental strand, 21849307 - 21849205
Alignment:
Q  210 cggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcg 309  Q
    |||| |||||| ||||||||| |||| ||||   |||||||||| ||||| ||| |||||||||||||||  ||| |||||||||||| |||||||| ||    
T  21849307 cgggttcgattcccaggggaa-caacgcttggctagtgcgcatgcctctacgcacgagccggattagtcgctcactattggtgggtcgaaaaccggtacg 21849209  T
Q  310 aaag 313  Q
    ||||    
T  21849208 aaag 21849205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 34697305 - 34697444
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||  |||||| || | |||||| || ||||||   ||||| |||||||||||   |||| ||||| ||||| ||||||||||||||    
T  34697305 aaggagctccttccaaaaacgtattcggggaataccaggttcgattcttagggggaacaacacttggctagtgtgcatgcctctacgcatgagccggatt 34697404  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||| ||||  ||| ||||| |||||||| |||||||||    
T  34697405 agtcgcccacttttgatgggttggaaaccgatgcgaaagc 34697444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 175 - 253
Target Start/End: Complemental strand, 34334433 - 34334355
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatg 253  Q
    ||||||||  || |||||||||||||| | ||||||||| |||||| ||||||| |||||||||||  |||||||||||    
T  34334433 aaggagctcattccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatg 34334355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 189 - 285
Target Start/End: Original strand, 13265922 - 13266018
Alignment:
Q  189 aaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccacc 285  Q
    ||||||||||||||| |||||| || |||||| | |||| |||||||   |   ||||||||||| ||||| ||||||||||| |||||||||||||    
T  13265922 aaggacgtatccgaggaatacctggttcgattcctagggaaaacaacgtctagccagtgcgcatgcctctacgcatgagccgggttagtcgtccacc 13266018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 230 - 314
Target Start/End: Original strand, 18808290 - 18808374
Alignment:
Q  230 aacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||| ||||| ||||||||||| || |||| ||||||||||||| ||| | | | ||  ||||||||||||||||||||||||    
T  18808290 aacaacgcttgaccagtgcgcatgcctttatgtatgagccggattattcgactaactttattgggtcggaaaccggtgcgaaagc 18808374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 17358609 - 17358470
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    ||||||||  ||||||||||||||  | | ||||||||| ||||||  |||||  |||||| ||||| || |||||||| || || ||||||||| ||||    
T  17358609 aaggagctcatttcaaggacgtatttggggaataccgggttcgattctcagggagaacaacgcttgaccaatgcgcatgcctttacgcatgagcccgatt 17358510  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||| || || | || ||||||| ||||||| | |||||||    
T  17358509 agttgttcatctttagtgggtcagaaaccgctacgaaagc 17358470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 314
Target Start/End: Original strand, 6899597 - 6899667
Alignment:
Q  244 agtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||||||| || || |||  |||||||||||||| ||||| ||| ||| ||||||||||||||||||||    
T  6899597 agtgcgcatgcctttacgcacaagccggattagtcgcccacctttgatggatcggaaaccggtgcgaaagc 6899667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 313
Target Start/End: Original strand, 45536784 - 45536830
Alignment:
Q  267 gccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    ||||||||||||| |||||| || |||||||||||||||||||||||    
T  45536784 gccggattagtcgcccaccaatgatgggtcggaaaccggtgcgaaag 45536830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 313
Target Start/End: Complemental strand, 50371972 - 50371834
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| |||  ||||| ||||| || ||||| || | ||||||| ||||   |||||| ||||  |||| ||||||  |||| |||  |||||||||    
T  50371972 aaggagctccttctaaggatgtatctgaaaaatagcgtgttcgattttcaggaagaacaacgcttggccagtacgcatgcttctacgcacaagccggatt 50371873  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    ||||| ||| | ||||||| |||||||||||||||||||    
T  50371872 agtcgcccatctttggtggatcggaaaccggtgcgaaag 50371834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 314
Target Start/End: Complemental strand, 12036814 - 12036742
Alignment:
Q  243 cagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcgg-aaaccggtgcgaaagc 314  Q
    ||||||||||| ||||| ||| ||||| ||||| ||||||||| ||||||| |||| ||||| ||||||||||    
T  12036814 cagtgcgcatgcctctacgcacgagccagattaatcgtccacctttggtggatcggaaaaccagtgcgaaagc 12036742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 314
Target Start/End: Complemental strand, 41696732 - 41696597
Alignment:
Q  178 gagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagt 277  Q
    ||||| ||| |||||||||||| ||| ||||| ||| |||||||||||||| |  ||||||||| ||||| | ||| ||||| ||| ||  | |||||||    
T  41696732 gagctccttccaaggacgtatctgaggaatac-gggttcgatttccagggggattaacacttgaccagtgtgtatgcctctacgcacgaatcagattagt 41696634  T
Q  278 cgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||  |||| ||| ||| |||||||| | |||||||||    
T  41696633 cgctcacctttgatggatcggaaactgatgcgaaagc 41696597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 44
Target Start/End: Original strand, 25061882 - 25061913
Alignment:
Q  13 attgtatcaaatggttgttcaaatatcattgc 44  Q
    ||||||||||||||||||||||||||||||||    
T  25061882 attgtatcaaatggttgttcaaatatcattgc 25061913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 269 - 312
Target Start/End: Complemental strand, 30044544 - 30044501
Alignment:
Q  269 cggattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 312  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||    
T  30044544 cggattagtcgtccaccaaaggtgggtcgaaaaccggtgcgaaa 30044501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 314
Target Start/End: Complemental strand, 3850799 - 3850741
Alignment:
Q  256 tctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||| ||| ||| ||||||||||| ||||| ||  ||||||||||||||||||||||||    
T  3850799 tctacgcacgaggcggattagtcgcccacctttaatgggtcggaaaccggtgcgaaagc 3850741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 44
Target Start/End: Complemental strand, 40595975 - 40595945
Alignment:
Q  14 ttgtatcaaatggttgttcaaatatcattgc 44  Q
    |||||||||||||||||||||||||||||||    
T  40595975 ttgtatcaaatggttgttcaaatatcattgc 40595945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 225
Target Start/End: Original strand, 41743243 - 41743293
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccag 225  Q
    |||||||| ||| |||||||||||||||| ||||||||| |||||| ||||    
T  41743243 aaggagctccttccaaggacgtatccgaggaataccgggttcgattcccag 41743293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 44
Target Start/End: Original strand, 48872529 - 48872559
Alignment:
Q  14 ttgtatcaaatggttgttcaaatatcattgc 44  Q
    |||||||||||||||||||||||||||||||    
T  48872529 ttgtatcaaatggttgttcaaatatcattgc 48872559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 314
Target Start/End: Complemental strand, 18708648 - 18708539
Alignment:
Q  205 aataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccg 304  Q
    ||||| ||| |||||||||||||||| |||  ||||   |||||||||| |||||  |||||||| |||||||||  |||| ||| ||||| | ||||||    
T  18708648 aatactgggttcgatttccaggggaagcaatgcttggctagtgcgcatgcctctacacatgagccagattagtcgctcacctttgatgggttgaaaaccg 18708549  T
Q  305 gtgcgaaagc 314  Q
     ||| |||||    
T  18708548 atgctaaagc 18708539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 314
Target Start/End: Original strand, 31152716 - 31152824
Alignment:
Q  205 aataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccg 304  Q
    ||||||||| ||||||||| |||| || ||| |||| ||||||||| || |||||  || ||| |  |||||||||||||| |||||| || ||| | ||    
T  31152716 aataccgggttcgatttcccgggggaataacgcttggtcagtgcgcgtgcctctacacacgagtcaaattagtcgtccacctttggtgagttggaga-cg 31152814  T
Q  305 gtgcgaaagc 314  Q
    ||||||||||    
T  31152815 gtgcgaaagc 31152824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 43
Target Start/End: Original strand, 44959083 - 44959112
Alignment:
Q  14 ttgtatcaaatggttgttcaaatatcattg 43  Q
    ||||||||||||||||||||||||||||||    
T  44959083 ttgtatcaaatggttgttcaaatatcattg 44959112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 314
Target Start/End: Complemental strand, 47084228 - 47084175
Alignment:
Q  261 gcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||||||||||||| |  ||||  ||||||||| ||||||||||||||||||    
T  47084228 gcatgagccggattagccacccacttttggtgggttggaaaccggtgcgaaagc 47084175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 291
Target Start/End: Complemental strand, 5063914 - 5063866
Alignment:
Q  243 cagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggt 291  Q
    ||||||| ||||||||||||| |||| |||||||||| ||||| |||||    
T  5063914 cagtgcgtatgtctctatgcacgagctggattagtcgcccacctttggt 5063866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 313
Target Start/End: Complemental strand, 8905215 - 8905163
Alignment:
Q  261 gcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    ||||||||| ||||| ||| ||||| ||| | |||||||||||||||||||||    
T  8905215 gcatgagccagattaatcgaccacctttgattggtcggaaaccggtgcgaaag 8905163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 306
Target Start/End: Complemental strand, 17899951 - 17899887
Alignment:
Q  242 tcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggt 306  Q
    |||||| ||| ||||||| ||||||||| | |||||||| || |||| |||| ||||||||||||    
T  17899951 tcagtgtgcacgtctctacgcatgagccagcttagtcgttcatcattagtggatcggaaaccggt 17899887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 313
Target Start/End: Original strand, 34878626 - 34878674
Alignment:
Q  265 gagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    ||||||||||||||  ||||| ||| ||||||||||| |||||||||||    
T  34878626 gagccggattagtcacccacctttgatgggtcggaaatcggtgcgaaag 34878674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 314
Target Start/End: Complemental strand, 46929789 - 46929737
Alignment:
Q  262 catgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||||||||||||||||||||  ||| ||| ||| |||||| |||||||||    
T  46929789 catgagccggattagtcgtccacttttgatggatcgaaaaccgatgcgaaagc 46929737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 96; Significance: 4e-47; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 2467255 - 2467116
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||||||| | ||||||||| |||||||||||||| |||||| ||||  ||||||||||||||||||||||||||||||||    
T  2467255 aaggagctccttccaaggacgtatccggggaataccgggttcgatttccagggggaacaactcttggccagtgcgcatgtctctatgcatgagccggatt 2467156  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||||||| ||||||| |||||||||||||||||||||    
T  2467155 agtcgtccacaattggtgtgtcggaaaccggtgcgaaagc 2467116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 8141075 - 8141214
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| ||||||||||| || | ||||||||| ||||||||||||||||||||| ||||  ||||||||||| ||||| |||||||| | |||    
T  8141075 aaggagctgcttccaaggacgtattcggggaataccgggttcgatttccaggggaaacaacgcttggccagtgcgcatgcctctacgcatgagctgaatt 8141174  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||  |||||||||| ||||||| |||||||||    
T  8141175 agtcgtccacatttggtgggtcagaaaccgatgcgaaagc 8141214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 10927579 - 10927718
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    ||||||||||||||||||||||| ||| | ||||||||| |||||| | ||| | |||||| ||||  ||||||||||| ||||| ||||||||||||||    
T  10927579 aaggagcttctttcaaggacgtacccggggaataccgggttcgattcctaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggatt 10927678  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||| |||| || ||||||||||||||| |||||||||    
T  10927679 agtcgttcacctttagtgggtcggaaaccgatgcgaaagc 10927718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 188 - 314
Target Start/End: Original strand, 45521155 - 45521280
Alignment:
Q  188 caaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccat 287  Q
    |||||| ||| ||| | ||||||||| |||||| ||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||  |||| |    
T  45521155 caaggatgtacccggggaataccgggttcgattcccaggggaa-caacacttgatcagtgcgcatgcctctacgcatgagccggattagtcgctcacctt 45521253  T
Q  288 tggtgggtcggaaaccggtgcgaaagc 314  Q
    || ||||||||||||||||||||||||    
T  45521254 tgatgggtcggaaaccggtgcgaaagc 45521280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 6100445 - 6100584
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| |||||||||||||||||| | ||||||||| |||||| ||||| | |||||| ||||  ||||||||||| | ||| ||||||||||||||    
T  6100445 aaggagctcctttcaaggacgtatccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgccactacgcatgagccggatt 6100544  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||| |||| || |||||||| |||||| |||||||||    
T  6100545 agtcgttcacctttagtgggtcgaaaaccgctgcgaaagc 6100584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 14666208 - 14666069
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    ||||||||  || |||||||||||||| | ||||||||| |||||| |||||||||||||||||||  ||||||||||| ||||| |||  |||| ||||    
T  14666208 aaggagctcattccaaggacgtatccggggaataccgggttcgattcccaggggaaacaacacttggccagtgcgcatgcctctacgcacaagccagatt 14666109  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||| ||||  ||||||||||| ||||||||||||||||    
T  14666108 agtcgcccacagttggtgggtcgaaaaccggtgcgaaagc 14666069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 174 - 312
Target Start/End: Complemental strand, 15884693 - 15884556
Alignment:
Q  174 taaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggat 273  Q
    ||||||||| ||| |||||||||| | | | ||||||||| |||||| ||||||||| |||||||||   |||||||||| ||||| ||| |||||||||    
T  15884693 taaggagctccttccaaggacgtacctggggaataccgggttcgattcccaggggaa-caacacttggcaagtgcgcatgcctctacgcacgagccggat 15884595  T
Q  274 tagtcgtccaccattggtgggtcggaaaccggtgcgaaa 312  Q
    |||||| ||||| ||||||||||||||||||||||||||    
T  15884594 tagtcgcccacctttggtgggtcggaaaccggtgcgaaa 15884556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 178 - 314
Target Start/End: Complemental strand, 9860130 - 9859993
Alignment:
Q  178 gagcttctttcaaggacgtatccgaga-aataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattag 276  Q
    ||||| ||| |||||||||||||| |  ||||||||| |||||| ||||||| |||||||||||  ||||| ||||| |||||  |||||||| ||||||    
T  9860130 gagctccttccaaggacgtatccgggggaataccgggttcgattcccagggggaacaacacttggccagtgtgcatgcctctacacatgagccagattag 9860031  T
Q  277 tcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||||||||| |||||||||| ||| |||||    
T  9860030 tcgtccaccattggtggatcggaaaccgatgcaaaagc 9859993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 184 - 312
Target Start/End: Complemental strand, 4479423 - 4479296
Alignment:
Q  184 ctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtcca 283  Q
    |||||||||||||| | |   ||||||||  |||||| ||||||||| |||| ||||  ||||||||||| ||||| |||||||| ||||||||||||||    
T  4479423 ctttcaaggacgtacctgtagaataccggattcgattcccaggggaa-caacgcttggccagtgcgcatgcctctacgcatgagctggattagtcgtcca 4479325  T
Q  284 ccattggtgggtcggaaaccggtgcgaaa 312  Q
    || ||||||||||||||||||||||||||    
T  4479324 cctttggtgggtcggaaaccggtgcgaaa 4479296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 196 - 313
Target Start/End: Original strand, 18374004 - 18374121
Alignment:
Q  196 tatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggt 295  Q
    |||||| |||||||| || ||||||  |||||  |||||| ||||| ||||||||||| ||||| ||||||||||||||||||||||| | |||||||||    
T  18374004 tatccgggaaataccaggttcgattctcagggagaacaacgcttgaccagtgcgcatgcctctacgcatgagccggattagtcgtccaactttggtgggt 18374103  T
Q  296 cggaaaccggtgcgaaag 313  Q
    || |||||||||| ||||    
T  18374104 cgaaaaccggtgcaaaag 18374121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 583787 - 583924
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| ||||||||||  |||||||||||||| |||||| | ||||  |||||| ||||| ||||||||||| ||||| ||||||| ||||||    
T  583787 aaggagctacttccaaggacgtactcgagaaataccgggttcgattcctaggg--aacaacgcttgaccagtgcgcatgcctctacgcatgagtcggatt 583884  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||| ||||| ||| ||| |  |||||||||||||||||    
T  583885 agtcgcccacctttgatggattagaaaccggtgcgaaagc 583924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 3418650 - 3418511
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||||| | | |||| |||| |||||||  ||| | |||||||||||  |||||||||||  |||| ||||||| | ||||    
T  3418650 aaggagctccttccaaggacgtatctggggaatatcgggttcgatttttaggaggaacaacacttggccagtgcgcatgcgtctacgcatgagtcagatt 3418551  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||| || ||||||| |||||||||||||||||    
T  3418550 agtcgtccacctttagtgggtcagaaaccggtgcgaaagc 3418511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 10535540 - 10535402
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||||||||| |||||  || || |||| |||||||| || | ||||| ||||||||||||||| | |||||||||| |||    
T  10535540 aaggagctccttccaaggacgtatccgaggaatacatggttcaattttcaggggaa-caccgcttgaccagtgcgcatgtctccacgcatgagccgaatt 10535442  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||| |||| |||||  ||||||||| |||||||||||    
T  10535441 agtcgttcacctttggtaagtcggaaactggtgcgaaagc 10535402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 17981414 - 17981553
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||| ||| ||| ||||||||||| |||||| ||||||| |||||| ||||| ||||| ||||| ||||| ||| ||| || |||    
T  17981414 aaggagctccttccaaggatgtacccgggaaataccgggttcgattcccagggggaacaactcttgaccagtgtgcatgcctctacgcacgagtcgaatt 17981513  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||| | ||| | |||||| |||||||||||||||||||||    
T  17981514 agttgcccagctttggtgagtcggaaaccggtgcgaaagc 17981553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 175 - 285
Target Start/End: Complemental strand, 33401936 - 33401826
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||||||||||||||  || | ||||||||| ||||||| |||||| |||||||||||| ||||| ||||| ||||| ||||||| ||||||    
T  33401936 aaggagctcctttcaaggacgtactcggggaataccgggttcgattttcagggggaacaacacttgaccagtgtgcatgcctctacgcatgagtcggatt 33401837  T
Q  275 agtcgtccacc 285  Q
    ||||| |||||    
T  33401836 agtcgcccacc 33401826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 215 - 314
Target Start/End: Original strand, 43032914 - 43033013
Alignment:
Q  215 tcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||| ||||||| |||||| ||||  ||||||||||| |||||  || ||||||||||||||| ||||| |||||||||| |||||||||||||||||    
T  43032914 tcgattcccagggggaacaacgcttggccagtgcgcatgcctctacacacgagccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaagc 43033013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 189 - 314
Target Start/End: Original strand, 14846563 - 14846687
Alignment:
Q  189 aaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccatt 288  Q
    ||||||||| ||| | ||||||||| ||||||  |||||||| |||   ||| |||||||||||| ||||| ||||||| | ||| ||||||||||| ||    
T  14846563 aaggacgtacccggggaataccgggttcgattctcaggggaa-caatgattggtcagtgcgcatgcctctacgcatgagtcagataagtcgtccaccttt 14846661  T
Q  289 ggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||||| ||||||||||||    
T  14846662 ggtgggtcggaaatcggtgcgaaagc 14846687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 215 - 314
Target Start/End: Complemental strand, 16291300 - 16291201
Alignment:
Q  215 tcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||| |||||| |||||||||||  |||| | |||| |||||||||||||| ||||||||||  |||| ||||||||||| ||||||||| ||||||    
T  16291300 tcgattttcagggggaacaacacttggccagtacacatgcctctatgcatgagctggattagtcgctcacctttggtgggtcgaaaaccggtgtgaaagc 16291201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 24837215 - 24837354
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||| ||||| ||| | ||||||| | |||||| ||||||  |||||| ||||  |||||  |||| ||||| ||| |||| |||||    
T  24837215 aaggagctccttccaagtacgtacccggggaataccgtgttcgattcccagggagaacaacgcttggccagtgttcatgcctctaagcacgagcaggatt 24837314  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||| ||||||| |||||||| |||||||||||    
T  24837315 agtcgtccacctttggtggatcggaaactggtgcgaaagc 24837354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 215 - 306
Target Start/End: Complemental strand, 36914530 - 36914439
Alignment:
Q  215 tcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggt 306  Q
    ||||||| |||| | |||||| |||||||||||| ||| || |||||||||||  ||||||||| |||||||||||||||||| ||||||||    
T  36914530 tcgattttcaggaggaacaacgcttgatcagtgcacatatcactatgcatgagttggattagtcatccaccattggtgggtcgaaaaccggt 36914439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 242 - 312
Target Start/End: Complemental strand, 3379882 - 3379812
Alignment:
Q  242 tcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 312  Q
    |||||||||| | ||||||||||||| ||||||||||||||||  ||||||||||||||| ||||||||||    
T  3379882 tcagtgcgcacgcctctatgcatgagtcggattagtcgtccacttttggtgggtcggaaatcggtgcgaaa 3379812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 175 - 313
Target Start/End: Complemental strand, 44893415 - 44893277
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||| ||| | ||||||||| || ||||| ||||| |||||  ||||  ||||| ||||| ||||| ||| ||||||||||    
T  44893415 aaggagctccttccaaggacgtacccggggaataccgggttcaatttctagggggaacaatgcttggccagtgtgcatgcctctacgcacgagccggatt 44893316  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    | |||  |||| ||| |||||||||||||||||| ||||    
T  44893315 aatcgctcacccttgatgggtcggaaaccggtgcaaaag 44893277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 175 - 304
Target Start/End: Complemental strand, 1013114 - 1012985
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    ||||||||| || |||||||||||||| | ||||||||| |||||| ||||||| |||||| ||||  |||| | |||| ||||| |||||||||| |||    
T  1013114 aaggagctttttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacgcttggccagtacacatgcctctacgcatgagccgaatt 1013015  T
Q  275 agtcgtccaccattggtgggtcggaaaccg 304  Q
    | |||| |||| || |||| ||| ||||||    
T  1013014 aatcgttcacctttagtggatcgaaaaccg 1012985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 205 - 306
Target Start/End: Complemental strand, 24938669 - 24938568
Alignment:
Q  205 aataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccg 304  Q
    |||||| || |||||||| ||  ||||||||||||| ||| |||||||| ||||| |||||| ||||||||||| |||||| ||| ||| ||||||||||    
T  24938669 aataccaggttcgatttctagatgaaacaacacttggtcaatgcgcatgcctctacgcatgaaccggattagtcatccacctttgatggatcggaaaccg 24938570  T
Q  305 gt 306  Q
    ||    
T  24938569 gt 24938568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 205 - 314
Target Start/End: Original strand, 43027308 - 43027417
Alignment:
Q  205 aataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccg 304  Q
    ||||| ||| |||||| ||||| | ||||||  |||  || |||||||| ||||| ||||||||||||||||||||||| | ||| ||||||||||||||    
T  43027308 aatactgggttcgattcccaggaggaacaacgattgtccaatgcgcatgcctctacgcatgagccggattagtcgtccatctttgatgggtcggaaaccg 43027407  T
Q  305 gtgcgaaagc 314  Q
     |||||||||    
T  43027408 atgcgaaagc 43027417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 230 - 314
Target Start/End: Complemental strand, 11298349 - 11298265
Alignment:
Q  230 aacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||   ||||||||||| |||||||||||||||  |||| |||  |||| ||||||||||||||||||||||||||||    
T  11298349 aacaacacttagccagtgcgcatgcctctatgcatgagccaaattaatcgctcacctttggtgggtcggaaaccggtgcgaaagc 11298265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 291
Target Start/End: Original strand, 22958783 - 22958859
Alignment:
Q  215 tcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggt 291  Q
    ||||||| ||| || |||||  |||| |||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  22958783 tcgattttcagagggaacaatgcttggtcagtgtgcatgtctctatgcatgagccggattagtcgtccacctttggt 22958859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 175 - 313
Target Start/End: Original strand, 36662377 - 36662515
Alignment:
Q  175 aaggagcttctttc-aaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggat 273  Q
    |||||||| ||||| |||||||||| |||| |||| |||| ||||||| |||||||| ||| ||||   ||||||||||| ||||| | |||| ||||||    
T  36662377 aaggagctcctttccaaggacgtatacgaggaatatcgggttcgattttcaggggaa-caatacttagccagtgcgcatgcctctacgtatgaaccggat 36662475  T
Q  274 tagtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    |||||||||||  ||  ||| |||||||||| ||||||||    
T  36662476 tagtcgtccacttttaatggatcggaaaccgatgcgaaag 36662515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 175 - 313
Target Start/End: Original strand, 2209756 - 2209894
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| |||  |||||||| || ||| |||| |||| | ||||   ||||||||||||| ||| |||||||||||||| ||| |||| ||  |||||    
T  2209756 aaggagctccttctaaggacgtgtctgaggaatatcgggtttgattcttaggggaaacaacatttggtcagtgcgcatgtccctacgcataagttggatt 2209855  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    |||||  |||||||||| |||| ||||| ||||||||||    
T  2209856 agtcgctcaccattggtaggtcagaaactggtgcgaaag 2209894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 230 - 314
Target Start/End: Original strand, 27975919 - 27976003
Alignment:
Q  230 aacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||||||||||||||| ||||| ||||| || |||||||||||| ||| ||||| || ||||||| | ||||| |||||||||    
T  27975919 aacaacacttgatcagtgtgcatgcctctacgcttgagccggattaatcgcccacctttagtgggtcaggaaccgatgcgaaagc 27976003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 230 - 314
Target Start/End: Original strand, 28033188 - 28033272
Alignment:
Q  230 aacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||||||||||||||| ||||| ||||| || |||||||||||| ||| ||||| || ||||||| | ||||| |||||||||    
T  28033188 aacaacacttgatcagtgtgcatgcctctacgcttgagccggattaatcgcccacctttagtgggtcaggaaccgatgcgaaagc 28033272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 182 - 314
Target Start/End: Complemental strand, 34710697 - 34710565
Alignment:
Q  182 ttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtc 281  Q
    ||||| ||||||||||  ||  |||||||||  |||||| |||||||||||||||||||   |||||||||| || ||  ||  || |||| ||||||||    
T  34710697 ttcttccaaggacgtactcggaaaataccggattcgattcccaggggaaacaacacttggctagtgcgcatgcctttacacacaagtcggactagtcgtc 34710598  T
Q  282 caccattggtgggtcggaaaccggtgcgaaagc 314  Q
    || ||||||||||||| ||||| || |||||||    
T  34710597 catcattggtgggtcgaaaaccagtccgaaagc 34710565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 303
Target Start/End: Original strand, 3567926 - 3568005
Alignment:
Q  224 aggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaacc 303  Q
    ||||| |||||||||||| |||||| |||  ||||| |||||||||  ||||||| |||||| |||||||||||||||||    
T  3567926 agggggaacaacacttgaccagtgcacatacctctacgcatgagccaaattagtcatccacctttggtgggtcggaaacc 3568005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 296
Target Start/End: Original strand, 6042824 - 6042915
Alignment:
Q  205 aataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtc 296  Q
    ||||||||| |||||| ||| ||| |||||| ||||  ||||||||||| ||  | ||||||||||||||||||| |||||| |||||||||    
T  6042824 aataccgggttcgattcccaaggggaacaacgcttggccagtgcgcatgcctaaacgcatgagccggattagtcgcccaccactggtgggtc 6042915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 314
Target Start/End: Complemental strand, 8997613 - 8997542
Alignment:
Q  243 cagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||| |||||| || || ||||||||| |||||||||| || | ||||||||||||||||||||||||||||    
T  8997613 cagttcgcatgcctatacgcatgagccagattagtcgttcatctttggtgggtcggaaaccggtgcgaaagc 8997542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 308
Target Start/End: Complemental strand, 13358019 - 13357960
Alignment:
Q  249 gcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgc 308  Q
    ||||| ||||||||| |||||||||||||||||| || || |||||||||||||||||||    
T  13358019 gcatgcctctatgcacgagccggattagtcgtccccctttagtgggtcggaaaccggtgc 13357960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 302
Target Start/End: Original strand, 25848182 - 25848276
Alignment:
Q  210 cggggtcgatttccaggggaaacaacac--ttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaac 302  Q
    |||| |||||| ||||| ||||||||||  ||| ||||||| |||||||||| ||||||| |||| |||||||||||| ||| ||||||| ||||    
T  25848182 cgggttcgattcccaggagaaacaacacacttggtcagtgcacatgtctctacgcatgagtcggactagtcgtccacctttgctgggtcgaaaac 25848276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 26570897 - 26571036
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||  |||| ||||| ||||| | |||||| |||| || ||| | ||||| |||||| ||||  ||||| | |||  |||| ||||||||||||||    
T  26570897 aaggagcgacttttaaggatgtatctgggaaatatcgggttcaattcctagggggaacaacgcttggccagtgtgtatgcatctacgcatgagccggatt 26570996  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||| ||| || ||||||||||| || ||||||    
T  26570997 agtcgtccacctttgatgagtcggaaaccgatgtgaaagc 26571036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 314
Target Start/End: Original strand, 2964123 - 2964188
Alignment:
Q  249 gcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||| ||||| ||| || |||||||||||| ||||| |||||||||| |||||||||||||||||    
T  2964123 gcatgcctctacgcacgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaagc 2964188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 314
Target Start/End: Complemental strand, 4772094 - 4772049
Alignment:
Q  269 cggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||    
T  4772094 cggattagtcgtccacctttggtgggtcggaaaccggtgcgtaagc 4772049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 312
Target Start/End: Complemental strand, 28738232 - 28738151
Alignment:
Q  231 acaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 312  Q
    ||||| ||| |||||||||||||||| || ||| ||||| ||| ||| | |||||||||||  |||||||||||||||||||    
T  28738232 acaacgcttaatcagtgcgcatgtctttacgcacgagccagatcagttgcccaccattggtatgtcggaaaccggtgcgaaa 28738151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 314
Target Start/End: Original strand, 993232 - 993300
Alignment:
Q  246 tgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||||||||||| | |||||  |||||||||||||||| ||||||| || |||| ||||||||||||    
T  993232 tgcgcatgtctctacgtatgagttggattagtcgtccacctttggtggttcagaaatcggtgcgaaagc 993300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 269 - 313
Target Start/End: Complemental strand, 1653903 - 1653859
Alignment:
Q  269 cggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    |||||||||||||||  ||||||||||||||||||||||||||||    
T  1653903 cggattagtcgtccattattggtgggtcggaaaccggtgcgaaag 1653859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 269 - 313
Target Start/End: Complemental strand, 1742279 - 1742235
Alignment:
Q  269 cggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    |||||||||||||||  ||||||||||||||||||||||||||||    
T  1742279 cggattagtcgtccattattggtgggtcggaaaccggtgcgaaag 1742235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 314
Target Start/End: Original strand, 8803107 - 8803166
Alignment:
Q  255 ctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||| ||| ||||||||||||||| ||| || ||||||||||||||||| |||||||||    
T  8803107 ctctacgcacgagccggattagtcgcccatcaatggtgggtcggaaaccgatgcgaaagc 8803166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 16893910 - 16894047
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    ||||| || ||| ||| |||||||||| | |||| |||| ||||||  |||||| || ||| ||||  |||| | |||| || || ||||||||||||||    
T  16893910 aaggaactccttccaatgacgtatccggggaatatcgggttcgattcacagggggaataacgcttggccagtacacatgcctttacgcatgagccggatt 16894009  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
     |||| ||||| ||||||| ||||||||||||||||||||    
T  16894010 -gtcgcccacctttggtgg-tcggaaaccggtgcgaaagc 16894047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 285
Target Start/End: Complemental strand, 35496391 - 35496282
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    ||||||||  ||||||||||||||| ||| |||| | || || |||| ||| |||||||||||||| |||||||||||| ||||| | | |||| |||||    
T  35496391 aaggagctcatttcaaggacgtatc-gaggaatatcaggttcaattttcagaggaaacaacacttggtcagtgcgcatgcctctacgtacgagctggatt 35496293  T
Q  275 agtcgtccacc 285  Q
    | ||| |||||    
T  35496292 aatcgcccacc 35496282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 314
Target Start/End: Original strand, 3692873 - 3692945
Alignment:
Q  242 tcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||||||||  ||||| |||||||||| |||| |||| |||| ||||| ||||| |||||||| |||||||    
T  3692873 tcagtgcgcatacctctacgcatgagccgaattaatcgttcacctttggtaggtcgaaaaccggtacgaaagc 3692945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 279
Target Start/End: Complemental strand, 33935872 - 33935768
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| |||| ||||| ||| || || ||||||||  |||||| | ||||  |||||||||||  ||||||||||| || || ||||||| ||||||    
T  33935872 aaggagctccttttaaggatgtacccaaggaataccggattcgattcctagggagaacaacacttggccagtgcgcatgcctatacgcatgagtcggatt 33935773  T
Q  275 agtcg 279  Q
    |||||    
T  33935772 agtcg 33935768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 174 - 313
Target Start/End: Original strand, 6940530 - 6940668
Alignment:
Q  174 taaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggat 273  Q
    |||||||||  || |||||| |||||||  ||||| |||| |||||||||||| | |||||| ||||   |||||||||  || ||  |||||| || ||    
T  6940530 taaggagctcattccaaggaggtatccggaaaatatcgggttcgatttccaggtggaacaacgcttggctagtgcgcat-actttacacatgagtcgaat 6940628  T
Q  274 tagtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    ||||| |||||| ||||||||| |||||||| || |||||    
T  6940629 tagtcatccacctttggtgggtaggaaaccgatgtgaaag 6940668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 313
Target Start/End: Original strand, 23895596 - 23895679
Alignment:
Q  230 aacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    |||||| ||||  ||||||||||  ||||| ||| |||  |||||| ||||||||| ||| |||||||||||| ||||||||||    
T  23895596 aacaacgcttggccagtgcgcatacctctacgcacgagatggattaatcgtccacctttgatgggtcggaaacgggtgcgaaag 23895679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 44
Target Start/End: Original strand, 36740461 - 36740492
Alignment:
Q  13 attgtatcaaatggttgttcaaatatcattgc 44  Q
    ||||||||||||||||||||||||||||||||    
T  36740461 attgtatcaaatggttgttcaaatatcattgc 36740492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 253
Target Start/End: Complemental strand, 38922551 - 38922473
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatg 253  Q
    |||||||| ||| |||||||||| ||| | ||||||||| |||||| |||| || |||||| ||||  |||||||||||    
T  38922551 aaggagctccttccaaggacgtacccggggaataccgggttcgattcccagagggaacaacgcttggccagtgcgcatg 38922473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 279
Target Start/End: Complemental strand, 22276543 - 22276494
Alignment:
Q  230 aacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcg 279  Q
    ||||||||||| || ||||||||| ||||| |||| ||||||||||||||    
T  22276543 aacaacacttgttcggtgcgcatgcctctacgcataagccggattagtcg 22276494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 279
Target Start/End: Original strand, 29933780 - 29933849
Alignment:
Q  210 cggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcg 279  Q
    |||| |||||| ||||||  |||||||||||| |||||  |||| ||||| | |||||||||||||||||    
T  29933780 cgggttcgattcccagggagaacaacacttgaccagtgtacatgcctctacgtatgagccggattagtcg 29933849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 313
Target Start/End: Complemental strand, 68145 - 68097
Alignment:
Q  265 gagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    ||||||||||| |||| |||| ||| |||||||||||||||||| ||||    
T  68145 gagccggattaatcgttcacctttgatgggtcggaaaccggtgcaaaag 68097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 314
Target Start/End: Complemental strand, 22212589 - 22212513
Alignment:
Q  238 ttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||| |||| ||||||  |||| ||| | |||||||||||||  |||| ||||||| ||| ||||||||||||||||    
T  22212589 ttgaccagtacgcatgcttctacgcacgggccggattagtcgctcacctttggtggttcgaaaaccggtgcgaaagc 22212513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 1e-44; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 48804655 - 48804794
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||||||| | ||||||||| |||||| ||| ||| |||||||||||  ||||||||||| ||||| ||||||||||||||    
T  48804655 aaggagctccttccaaggacgtatccggggaataccgggttcgattcccaaggggaacaacacttggccagtgcgcatgcctctacgcatgagccggatt 48804754  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  48804755 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 48804794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 10048013 - 10047874
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||||||| | ||||||||| |||||| ||||||| |||||||||||  ||||||||| | ||||| |||||||| | |||    
T  10048013 aaggagctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcaggcctctacgcatgagcagaatt 10047914  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  10047913 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 10047874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 13095830 - 13095969
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| |||||||||||||| ||| | ||||||||| || ||| ||||||| |||||||||||  ||||||||||| ||||| ||||||||||||||    
T  13095830 aaggagctcctttcaaggacgtacccggggaataccgggttctattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggatt 13095929  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||  |||| |||||||||||||||||||||| |||||    
T  13095930 agtcgctcacctttggtgggtcggaaaccggtgcaaaagc 13095969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 1797432 - 1797571
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||||||||| ||||||||| |||||| |||||||||||||| ||||  ||||||||||||||||| ||| |||||||| |    
T  1797432 aaggagctccttccaaggacgtatccgaggaataccgggttcgattcccaggggaaacaacgcttggccagtgcgcatgtctctacgcacgagccggact 1797531  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||| | ||| ||| ||| |||||||||| |||||    
T  1797532 agtcgtccatctttgatggatcgaaaaccggtgcaaaagc 1797571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 183 - 313
Target Start/End: Complemental strand, 38578996 - 38578866
Alignment:
Q  183 tctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtcc 282  Q
    |||| |||||||||| ||| | |||| |||| |||||| ||||||| |||||| ||||  ||||||||||| ||||| ||||||||||||||||||| ||    
T  38578996 tcttccaaggacgtacccggggaatatcgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgccc 38578897  T
Q  283 accattggtgggtcggaaaccggtgcgaaag 313  Q
    ||| |||||||||||||||||||||||||||    
T  38578896 acctttggtgggtcggaaaccggtgcgaaag 38578866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 4195339 - 4195200
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||  |||||||||||||| | ||||||| | |||||||||||| | ||||||| |||   |||||||||| ||||| ||||||||||||||    
T  4195339 aaggagctcctgccaaggacgtatccggggaataccgagttcgatttccaggaggaacaacatttggctagtgcgcatgcctctacgcatgagccggatt 4195240  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    || |||||||||||||||||| |||||||| |||||||||    
T  4195239 agccgtccaccattggtgggttggaaaccgatgcgaaagc 4195200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 179 - 314
Target Start/End: Complemental strand, 17748515 - 17748380
Alignment:
Q  179 agcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtc 278  Q
    |||||||| ||||||||||| || | ||||||||| |||||| ||||||| |||||| ||||  ||||||||||| ||||| | | ||||||||||||||    
T  17748515 agcttcttccaaggacgtattcggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgtacgagccggattagtc 17748416  T
Q  279 gtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||| ||| |||||||||||||| |||||||||    
T  17748415 gtccacctttgttgggtcggaaaccgatgcgaaagc 17748380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 1605913 - 1606052
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||| |||   |||||| || |||||||||||||| |||||| ||||  |||||| |||| ||||| || |||||||||||    
T  1605913 aaggagctccttccaaggacgtacccggagaatacctggttcgatttccagggggaacaacgcttggccagtgcacatgcctctaggcttgagccggatt 1606012  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||| ||||| ||||||| ||||||||||||||||||||    
T  1606013 agtcgcccacctttggtggatcggaaaccggtgcgaaagc 1606052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 36619391 - 36619252
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    ||||| || ||| |||||||||||  | | ||||||||| |||||| ||||||| |||||||||||  ||||| ||||| ||||| ||||||||||||||    
T  36619391 aaggaactccttgcaaggacgtatttggggaataccgggttcgattcccagggggaacaacacttgtccagtgtgcatgcctctacgcatgagccggatt 36619292  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||||||||||||||  ||||| ||| ||||||    
T  36619291 agtcgtccaccattggtgggtcaaaaaccagtgtgaaagc 36619252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 47341848 - 47341987
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    ||||||||  || |||||||||| ||| | ||||||| | |||||| ||||||| |||||||||||  ||||||||||| ||||| ||| |||| |||||    
T  47341848 aaggagctcattccaaggacgtacccggggaataccgagttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcacgagcaggatt 47341947  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
     ||||| |||||||||||||||||||| ||||||||||||    
T  47341948 ggtcgttcaccattggtgggtcggaaatcggtgcgaaagc 47341987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 203 - 313
Target Start/End: Original strand, 27028279 - 27028389
Alignment:
Q  203 gaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaac 302  Q
    |||||||| || |||||||||||||| |||||||||||  ||||||||||| |||||  ||||||| ||||||||||  |||| ||||||||||||||||    
T  27028279 gaaataccaggttcgatttccagggggaacaacacttggccagtgcgcatgcctctacacatgagctggattagtcgctcacctttggtgggtcggaaac 27028378  T
Q  303 cggtgcgaaag 313  Q
    |||||||||||    
T  27028379 cggtgcgaaag 27028389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 179 - 311
Target Start/End: Original strand, 18785645 - 18785777
Alignment:
Q  179 agcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtc 278  Q
    |||| ||| |||||||||| ||| | ||||||||| |||||| | ||||| |||||||||||  ||||||||||| ||||| |||||| | |||||||||    
T  18785645 agctccttccaaggacgtacccggggaataccgggttcgattcctagggggaacaacacttggccagtgcgcatgcctctacgcatgaactggattagtc 18785744  T
Q  279 gtccaccattggtgggtcggaaaccggtgcgaa 311  Q
    || ||||  ||||||||||||||||||||||||    
T  18785745 gttcacctctggtgggtcggaaaccggtgcgaa 18785777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 5069952 - 5069813
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    ||||||||||||  ||||||||| ||| ||||||||||| |||||||||||| | |||||| |||    |||| ||||| ||||| |||  |||||||||    
T  5069952 aaggagcttcttctaaggacgtacccgggaaataccgggttcgatttccaggaggaacaacgcttagctagtgtgcatgcctctacgcacaagccggatt 5069853  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||| ||||| |||||||||||||||||| |||||||||    
T  5069852 agtcgcccacctttggtgggtcggaaaccgatgcgaaagc 5069813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 34659198 - 34659337
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| || ||| ||| ||| | ||||||||| ||||||  || ||| |||||| ||||| ||||||||||| ||||| ||| ||||||||||    
T  34659198 aaggagctccttccagggatgtacccggggaataccgggttcgattctcaaggggaacaacgcttgaccagtgcgcatgcctctacgcacgagccggatt 34659297  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||| |||||||||||| |||| ||||||||||||||||    
T  34659298 agtcgcccaccattggtgtgtcgaaaaccggtgcgaaagc 34659337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 314
Target Start/End: Original strand, 22973916 - 22974078
Alignment:
Q  158 caagttgtttgggctctaa------ggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgca 251  Q
    |||||||||||||||||||      |||||| ||| ||||||||||  || | ||||||||| ||||||  |||||| |||||| ||||  ||||| |||    
T  22973916 caagttgtttgggctctaatggcgaggagctccttccaaggacgtactcggggaataccgggttcgattctcagggggaacaacgcttggccagtgtgca 22974015  T
Q  252 tgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||  |||| ||||||||| ||||||||||||||| |||||||||| |||||||| ||||||||    
T  22974016 tgcgtctacgcatgagccagattagtcgtccacctttggtgggtcagaaaccggcgcgaaagc 22974078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 42210399 - 42210260
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    ||||||||  || |||||||||||||||| ||||||||  |||||| |||| | |||||||  |||  ||||||||||| ||||| ||| ||||||||||    
T  42210399 aaggagctctttccaaggacgtatccgaggaataccggcttcgattcccagtgaaaacaacgtttggccagtgcgcatgcctctacgcacgagccggatt 42210300  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    | ||  ||||| |||||||||||||||||| |||||||||    
T  42210299 aatcacccaccgttggtgggtcggaaaccgatgcgaaagc 42210260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 43862109 - 43861970
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    ||||||||  || ||| |||||||| | | ||||||||| |||||| ||||||| ||||||  |||  ||||||||||| ||||| ||||||||||||||    
T  43862109 aaggagctctttccaaagacgtatctggggaataccgggttcgattcccagggggaacaacgtttggccagtgcgcatgcctctacgcatgagccggatt 43862010  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||| | |||| ||||||| ||| ||||||||||||||||    
T  43862009 agtcattcacctttggtggatcgaaaaccggtgcgaaagc 43861970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 43925484 - 43925623
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||| ||| | ||||||||| |||||| ||||||| ||||||||||| |||||||||||| ||||| |||||||| |||||    
T  43925484 aaggagctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggtcagtgcgcatgcctctacgcatgagctggatt 43925583  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||| ||  ||| ||| ||| || ||||||| || ||||||    
T  43925584 agttgtttacctttgatggatcagaaaccgatgtgaaagc 43925623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 179 - 313
Target Start/End: Original strand, 37514897 - 37515031
Alignment:
Q  179 agcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtc 278  Q
    |||| ||| ||||||| || ||| | ||||| ||| ||||||| ||| || ||||||  ||| |||||||||||||||||| ||| ||||||||||| ||    
T  37514897 agctccttccaaggacatacccggggaatactgggttcgattttcagtgggaacaacgtttggtcagtgcgcatgtctctacgcacgagccggattaatc 37514996  T
Q  279 gtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    || ||||||| |||||||||||||||||| |||||    
T  37514997 gttcaccattagtgggtcggaaaccggtgtgaaag 37515031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 193 - 313
Target Start/End: Original strand, 365130 - 365250
Alignment:
Q  193 acgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtg 292  Q
    ||||||||||| ||||||||| ||||||  |||| | |||||| ||| ||||||||||||| ||||| ||||||||| |||||||   |||||| |||||    
T  365130 acgtatccgaggaataccgggttcgattcacaggaggaacaacgcttaatcagtgcgcatgcctctacgcatgagcctgattagtgacccaccagtggtg 365229  T
Q  293 ggtcggaaaccggtgcgaaag 313  Q
    ||||| |||||| ||||||||    
T  365230 ggtcgaaaaccgatgcgaaag 365250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 188 - 312
Target Start/End: Complemental strand, 26423411 - 26423288
Alignment:
Q  188 caaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccat 287  Q
    |||||||||| || || ||||||||| |||||| |||||||||||||| ||||  |||||| | || ||||| ||| ||||| |||||||||| |||| |    
T  26423411 caaggacgtacccaaggaataccgggttcgattcccaggggaaacaacgcttggccagtgcacctgcctctacgcacgagccagattagtcgttcacctt 26423312  T
Q  288 tggtgggtcggaaaccggtgcgaaa 312  Q
    |||| ||||||||||||||||||||    
T  26423311 tggt-ggtcggaaaccggtgcgaaa 26423288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 206 - 314
Target Start/End: Original strand, 39474943 - 39475051
Alignment:
Q  206 ataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccgg 305  Q
    |||||||| |||||| | | ||| |||||| |||| |||||||||||  ||||| ||||||||||||||||||||||||| || |||||||| ||||| |    
T  39474943 ataccgggttcgattcctatggggaacaacgcttggtcagtgcgcatacctctacgcatgagccggattagtcgtccacctttagtgggtcgaaaaccag 39475042  T
Q  306 tgcgaaagc 314  Q
    |||||||||    
T  39475043 tgcgaaagc 39475051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 230 - 314
Target Start/End: Complemental strand, 45697272 - 45697188
Alignment:
Q  230 aacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||||||||||||||||||||| ||||| |||||||  || ||||||||||||| ||||||||||||||||| || |||||||    
T  45697272 aacaacacttgatcagtgcgcatgcctctacgcatgagttgggttagtcgtccacctttggtgggtcggaaaccagtacgaaagc 45697188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 21530720 - 21530859
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||| | | | ||||| ||| | |||| ||||||| ||||||||||| ||||||| |||| ||||| ||| |||||| |||    
T  21530720 aaggagctccttccaaggacgtacctggggaatactgggtttgattcccagggggaacaacacttggtcagtgcacatgcctctacgcacgagccgaatt 21530819  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    | |||  |||| |||||||||||||||||||| |||||||    
T  21530820 aatcgctcacctttggtgggtcggaaaccggttcgaaagc 21530859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 244 - 314
Target Start/End: Complemental strand, 24983487 - 24983416
Alignment:
Q  244 agtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtc-ggaaaccggtgcgaaagc 314  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  24983487 agtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtctggaaaccgatgcgaaagc 24983416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 175 - 307
Target Start/End: Complemental strand, 4228888 - 4228759
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||||||||| |||||| || ||||||||||||   ||||||  |||  |||||| |||| | ||| ||||||||||||||    
T  4228888 aaggagctccttccaaggacgtatccgaggaataccaggttcgatttccagg---aacaacgtttggccagtgcacatgcccctacgcatgagccggatt 4228792  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtg 307  Q
    ||||| ||||||||| ||||||| ||| |||||    
T  4228791 agtcgcccaccattgatgggtcgaaaatcggtg 4228759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 205 - 314
Target Start/End: Complemental strand, 10317852 - 10317744
Alignment:
Q  205 aataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccg 304  Q
    ||||||||| |||||| ||||||| || |||||||| |||||||| ||| |||||||||| ||| | ||||||||  |||| ||||||| ||||||||||    
T  10317852 aataccgggttcgattcccagggggaataacacttggtcagtgcgtatgcctctatgcataagcag-attagtcgctcacctttggtggatcggaaaccg 10317754  T
Q  305 gtgcgaaagc 314  Q
    ||||||||||    
T  10317753 gtgcgaaagc 10317744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 185 - 314
Target Start/End: Complemental strand, 48244483 - 48244354
Alignment:
Q  185 tttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccac 284  Q
    ||||||||||||||  | | ||||||||| || ||||| | ||| |||||  |||||||||||||  || ||||| |||||||||||||||||||  |||    
T  48244483 tttcaaggacgtatttggggaataccgggttcaatttctaaggggaacaatgcttgatcagtgcgtttgcctctacgcatgagccggattagtcgctcac 48244384  T
Q  285 cattggtgggtcggaaaccggtgcgaaagc 314  Q
    | ||||||| ||| ||||||||||||||||    
T  48244383 ctttggtggatcgaaaaccggtgcgaaagc 48244354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 205 - 313
Target Start/End: Original strand, 22573815 - 22573922
Alignment:
Q  205 aataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccg 304  Q
    |||| |||| ||||||| |||||||| ||||| |||| ||||||||||| || || ||||||||||||||| ||||||| ||||| ||||| | ||||||    
T  22573815 aatatcgggttcgattttcaggggaa-caacatttgaccagtgcgcatgcctttacgcatgagccggattaatcgtccatcattgatgggttgaaaaccg 22573913  T
Q  305 gtgcgaaag 313  Q
    |||||||||    
T  22573914 gtgcgaaag 22573922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 192 - 312
Target Start/End: Complemental strand, 27875208 - 27875088
Alignment:
Q  192 gacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggt 291  Q
    |||||||| | | ||||||||  |||||| ||||||| || ||||||||  |||||| |||| ||||| ||||||| || |||||||||||||| || ||    
T  27875208 gacgtatctggggaataccggattcgattcccagggggaataacacttggccagtgcacatgcctctacgcatgagtcgcattagtcgtccacctttagt 27875109  T
Q  292 gggtcggaaaccggtgcgaaa 312  Q
    |||||| ||||||||||||||    
T  27875108 gggtcgaaaaccggtgcgaaa 27875088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 226 - 313
Target Start/End: Original strand, 3353447 - 3353534
Alignment:
Q  226 gggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    ||||||||||| |||  ||||||||||| ||||| ||| ||||||||||||||||||||| ||| ||| || ||||||||||||||||    
T  3353447 gggaaacaacatttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttgatggatcagaaaccggtgcgaaag 3353534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 14650289 - 14650428
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||| |||   |||| |||| |||||||||||| | |||||  ||||| ||||||  ||| ||||| ||||||||||| ||    
T  14650289 aaggagctccttccaaggacgtacccggagaatatcgggttcgatttccaggaggaacaatgcttgaccagtgcatatgcctctacgcatgagccgggtt 14650388  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||  |||| ||||||||| | ||||||||||||||||    
T  14650389 agtcgctcacctttggtgggttgaaaaccggtgcgaaagc 14650428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 22993504 - 22993365
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||| ||| | |||| |||| |||||| | ||| | |||||| ||||  ||||| ||||| ||||| ||| || |||||||    
T  22993504 aaggagctccttccaaggacgtacccggggaatatcgggttcgattccgaggaggaacaacgcttggccagtgtgcatgcctctacgcacgaaccggatt 22993405  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||  |||| |||||||||| |||||||||||||||||    
T  22993404 agtcgctcacctttggtgggtcagaaaccggtgcgaaagc 22993365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 184 - 314
Target Start/End: Original strand, 29151921 - 29152051
Alignment:
Q  184 ctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtcca 283  Q
    |||||| ||||||| | ||| ||||||||| |||||| |||||   ||||||  |||| ||||||||||| |||||  || || |||||||| ||||| |    
T  29151921 ctttcatggacgtacctgaggaataccgggttcgattcccaggaagaacaacgtttgaccagtgcgcatgcctctacacacgatccggattaatcgtcta 29152020  T
Q  284 ccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||| |||||||||||||| |||||||||    
T  29152021 ccattgatgggtcggaaaccgatgcgaaagc 29152051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 243 - 313
Target Start/End: Original strand, 41945513 - 41945583
Alignment:
Q  243 cagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    ||||||||||| ||||| ||| ||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  41945513 cagtgcgcatgcctctacgcacgagccggattagtcgtccacctttggtgagtcggaaatcggtgcgaaag 41945583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 175 - 308
Target Start/End: Complemental strand, 45960139 - 45960007
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    ||||||||  || |||||||||||| | ||| ||||| | | |||| ||| ||| ||||||||||| |||||||||||| ||||| |||| |||||||||    
T  45960139 aaggagctctttccaaggacgtatcggggaa-taccgagtttgattcccaagggcaacaacacttggtcagtgcgcatgcctctacgcataagccggatt 45960041  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgc 308  Q
    |||||  |||| ||| ||| ||||||||||||||    
T  45960040 agtcgctcacctttgatggatcggaaaccggtgc 45960007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 24969461 - 24969324
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    ||||||||| ||||||||||||||| |  |||||||||| |||||||||||||  |||||||||||  |||||||| || ||||| | |  || ||||||    
T  24969461 aaggagcttttttcaaggacgtatctggaaaataccgggttcgatttccaggg--aacaacacttggccagtgcgcgtgcctctacgtacaagtcggatt 24969364  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    | |||  || | ||| ||| ||||||||||||||||||||    
T  24969363 aatcgctcatctttgatggctcggaaaccggtgcgaaagc 24969324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 306
Target Start/End: Complemental strand, 28396286 - 28396166
Alignment:
Q  186 ttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccacc 285  Q
    |||||| ||||||||| |||||| |||| || |||  |||||| |||||| |||     ||||||||| || || ||||||||||||||||||||| |||    
T  28396286 ttcaagaacgtatccgggaaatatcgggttcaattctcagggggaacaacgcttagctggtgcgcatgcctttacgcatgagccggattagtcgtctacc 28396187  T
Q  286 attggtgggtcggaaaccggt 306  Q
     ||||||||||||||||||||    
T  28396186 tttggtgggtcggaaaccggt 28396166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 314
Target Start/End: Original strand, 48551900 - 48551968
Alignment:
Q  246 tgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||||| ||||| | ||||||||||||||||||||||| ||| ||| ||||||||||||||||||||    
T  48551900 tgcgcatgcctctacgtatgagccggattagtcgtccacctttgatggatcggaaaccggtgcgaaagc 48551968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 243 - 314
Target Start/End: Complemental strand, 8734755 - 8734684
Alignment:
Q  243 cagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||| ||| | ||| ||||| ||||||||| ||||| ||||||||||||||||||||||||||||    
T  8734755 cagtgcgcatgcctcaacgcacgagccagattagtcgcccacctttggtgggtcggaaaccggtgcgaaagc 8734684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 215 - 314
Target Start/End: Original strand, 23658191 - 23658290
Alignment:
Q  215 tcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||||||||||| |||||| ||||  ||||| ||||| |||||  || ||||||||||||||||||| | |||||||||| |||||| |||| |||||    
T  23658191 tcgatttccagggggaacaacgcttggccagtgtgcatgcctctacacacgagccggattagtcgtccatctttggtgggtcagaaacctgtgcaaaagc 23658290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 183 - 314
Target Start/End: Original strand, 32823224 - 32823354
Alignment:
Q  183 tctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtcc 282  Q
    |||| ||||||||||  ||||||||||| |  |||||| ||||||| |||||||||||  | ||| | ||| ||||| ||| |||||||||||||||       
T  32823224 tcttccaaggacgtactcgagaaataccagt-tcgattcccagggggaacaacacttggccggtgtgtatgcctctacgcacgagccggattagtcgcag 32823322  T
Q  283 accattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||| |||||||||||| |||||||||||    
T  32823323 accattgatgggtcggaaacgggtgcgaaagc 32823354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 39420810 - 39420948
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| |||||||||| ||| ||| | ||||||||  |||| | |||  || |||||| ||||  |||||||| || ||||| ||||||||||||||    
T  39420810 aaggagctcctttcaaggaggtacccggggaataccggt-tcgaatcccaaagggaacaacgcttggccagtgcgcgtgcctctacgcatgagccggatt 39420908  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||| ||| ||| |||| ||||||||||||| |||||    
T  39420909 agtcgtctacctttgatgggccggaaaccggtgcaaaagc 39420948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 43346916 - 43346777
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| ||| |||||||| | | ||||||||| || |||  || ||| |||||||||||  | ||||||||| ||||| | | ||||||||||    
T  43346916 aaggagctccttccaaagacgtatctggggaataccgggttcaattctcaaggggaacaacacttggccggtgcgcatgcctctacgtacgagccggatt 43346817  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||  || | ||||||||||||||||| ||||||||||    
T  43346816 agtcgctcatctttggtgggtcggaaaccagtgcgaaagc 43346777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 44961775 - 44961636
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||||||||||||||||||||||||| | |  || ||||  |||||  ||||  ||||| |||| |||||||||||| | | ||| | ||||    
T  44961775 aaggagctcctttcaaggacgtatccgagaaatatcagattcaatttttaggggggacaatgcttgaccagtacgcatgtctctacgtacgagtcagatt 44961676  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||  ||| || ||| ||||||||||||||||||||||||    
T  44961675 agttatccgcctttgatgggtcggaaaccggtgcgaaagc 44961636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 265 - 314
Target Start/End: Original strand, 28744224 - 28744273
Alignment:
Q  265 gagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  28744224 gagccggattagtcgtccacctttggtgggtcggaaactggtgcgaaagc 28744273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 314
Target Start/End: Complemental strand, 21190914 - 21190778
Alignment:
Q  178 gagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagt 277  Q
    ||||| ||| ||||||| |||||| | ||||||||| |||||| | ||| | | |||| ||||   |||||||||| ||||| ||| ||| | |||||||    
T  21190914 gagctccttccaaggacttatccggggaataccgggttcgattcctaggaggagcaacgcttggctagtgcgcatgcctctacgcacgagtcagattagt 21190815  T
Q  278 cgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    || ||| || |||||||||| ||||||||||||||||    
T  21190814 cgcccatcaatggtgggtcgaaaaccggtgcgaaagc 21190778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 230 - 306
Target Start/End: Original strand, 39230526 - 39230602
Alignment:
Q  230 aacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggt 306  Q
    ||||||||||||  | || ||||| ||||||||||||||||||||||| |||||| |||||||| ||| ||||||||    
T  39230526 aacaacacttgactaatgtgcatgcctctatgcatgagccggattagttgtccactattggtggatcgaaaaccggt 39230602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 3603396 - 3603467
Alignment:
Q  242 tcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    |||||||||||| ||||| ||| ||||||||||| |||| |||  ||||||||||||||| |||||||||||    
T  3603396 tcagtgcgcatgcctctacgcacgagccggattaatcgttcacttttggtgggtcggaaatcggtgcgaaag 3603467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 308
Target Start/End: Complemental strand, 5039525 - 5039422
Alignment:
Q  205 aataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccg 304  Q
    ||||||| | |||||| | ||| | ||||||||||| ||||||| |||  ||||| |||||||||||||||||||  |||| ||||||| ||| ||||||    
T  5039525 aataccgagttcgattcctaggaggaacaacacttggtcagtgcacatacctctacgcatgagccggattagtcgctcacctttggtggatcgaaaaccg 5039426  T
Q  305 gtgc 308  Q
    ||||    
T  5039425 gtgc 5039422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 175 - 305
Target Start/End: Original strand, 45447942 - 45448072
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||| |||||||||||| || |||||||||||||  |||||| ||||   |||||||||  |||||  ||  || | ||||    
T  45447942 aaggagctccttccaaggacgtacccgagaaataccaggttcgatttccagggagaacaacgcttggctagtgcgcatccctctacacactagtcagatt 45448041  T
Q  275 agtcgtccaccattggtgggtcggaaaccgg 305  Q
    ||||  ||||| || ||||||||||||||||    
T  45448042 agtcacccacctttagtgggtcggaaaccgg 45448072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 292
Target Start/End: Complemental strand, 4973247 - 4973130
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||||||| ||||||| ||| || | |||| |||| |||||| | | ||| || ||||||||| || |||||||| ||||| | | ||||||||||    
T  4973247 aaggagcttcttccaaggacttattcggggaatatcgggttcgattcctacggggaataacacttgaccaatgcgcatgcctctacgtacgagccggatt 4973148  T
Q  275 agtcgtccaccattggtg 292  Q
    ||||||||| | ||||||    
T  4973147 agtcgtccagctttggtg 4973130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 310
Target Start/End: Original strand, 14535293 - 14535398
Alignment:
Q  205 aataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccg 304  Q
    ||||||||| |  |||| |||||  |||||||||||  ||||| ||||| ||||| ||| |||| |||||||||| ||||||||| |||||| ||||| |    
T  14535293 aataccgggtttcattttcagggagaacaacacttggccagtgtgcatgcctctacgcacgagctggattagtcgcccaccattgatgggtcagaaactg 14535392  T
Q  305 gtgcga 310  Q
    ||||||    
T  14535393 gtgcga 14535398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 314
Target Start/End: Original strand, 16802098 - 16802234
Alignment:
Q  178 gagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagt 277  Q
    ||||| ||| |||||||||| ||| | ||||||||  ||||||   ||| | ||||||  |||  ||||||| ||| ||||| ||| |||||||||||||    
T  16802098 gagctccttccaaggacgtacccggggaataccggattcgattcttaggaggaacaacgattggccagtgcgtatgcctctacgcacgagccggattagt 16802197  T
Q  278 cgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||  |||||||||||||||| |||| ||||| |||||    
T  16802198 cgctcaccattggtgggtcgaaaactggtgcaaaagc 16802234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 29805510 - 29805439
Alignment:
Q  242 tcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    |||||||||||||||||| |||||||||  |||| ||||| ||| || ||| |||||||||| |||||||||    
T  29805510 tcagtgcgcatgtctctacgcatgagccaaattaatcgtctacctttagtgagtcggaaaccagtgcgaaag 29805439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 304
Target Start/End: Complemental strand, 41268063 - 41267932
Alignment:
Q  174 taaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccagggga-aacaacacttgatcagtgcgcatgtctctatgcatgagccgga 272  Q
    |||||||||||||  ||| |||||| |||  |||| || | |||||||  |||||| || ||| |||||| |||| ||||| ||||| |||||||   ||    
T  41268063 taaggagcttcttcaaagaacgtattcgaagaatatcgagttcgatttttaggggagaataacgcttgattagtgtgcatgcctctacgcatgagttaga 41267964  T
Q  273 ttagtcgtccaccattggtgggtcggaaaccg 304  Q
    ||||||||||||| ||| ||||||||||||||    
T  41267963 ttagtcgtccacctttgatgggtcggaaaccg 41267932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 314
Target Start/End: Original strand, 42032072 - 42032207
Alignment:
Q  179 agcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtc 278  Q
    |||| ||| |||||||||| ||| | |||||| || |||||| ||| ||| ||||||  |||  |||||| |||   |||| |||||||||| ||||||     
T  42032072 agctccttccaaggacgtacccggggaatacctggttcgattcccacggggaacaacgtttggccagtgcacatacatctacgcatgagccgaattagtt 42032171  T
Q  279 gtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||| ||| |||||||||||||| ||| |||||    
T  42032172 gtccacctttgatgggtcggaaaccgatgctaaagc 42032207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 308
Target Start/End: Original strand, 9685779 - 9685832
Alignment:
Q  255 ctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgc 308  Q
    ||||| |||||||||||||||||| |||||||||| ||| | ||||||||||||    
T  9685779 ctctacgcatgagccggattagtcatccaccattgatggataggaaaccggtgc 9685832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 265 - 314
Target Start/End: Complemental strand, 34127692 - 34127643
Alignment:
Q  265 gagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||||||| ||||| ||||||||||  ||||||||||||||||    
T  34127692 gagccggattagtcgcccacctttggtgggtcaaaaaccggtgcgaaagc 34127643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 314
Target Start/End: Complemental strand, 49142776 - 49142667
Alignment:
Q  205 aataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccg 304  Q
    ||||||||| |||||| | ||||| |||||| |||   |||||| |||| ||||| ||| ||||||||||||| | ||||| ||| ||||||| |||  |    
T  49142776 aataccgggttcgattcctagggggaacaacgcttagccagtgcacatgcctctacgcacgagccggattagttgcccacctttgatgggtcgaaaattg 49142677  T
Q  305 gtgcgaaagc 314  Q
    ||||||||||    
T  49142676 gtgcgaaagc 49142667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 30827294 - 30827370
Alignment:
Q  205 aataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtc 281  Q
    |||||| || ||||||| |||||  |||||||||||  |||| |||||| ||||| ||| |||||||||||||||||    
T  30827294 aataccaggttcgattttcagggagaacaacacttggccagtacgcatgcctctacgcacgagccggattagtcgtc 30827370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 314
Target Start/End: Original strand, 32768984 - 32769048
Alignment:
Q  250 catgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||| ||||| ||| ||| |||||||||||| |||| ||||||| ||||||||||||| ||||||    
T  32768984 catgcctctacgcacgagtcggattagtcgttcacctttggtggatcggaaaccggtgtgaaagc 32769048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 310
Target Start/End: Original strand, 38988932 - 38989006
Alignment:
Q  235 cacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcga 310  Q
    |||||| ||||||| |||| ||||| |||||| ||||||||||||  || | |||||||||| |||||||||||||    
T  38988932 cacttggtcagtgcacatgcctctacgcatgaaccggattagtcgctcatctttggtgggtc-gaaaccggtgcga 38989006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 34865956 - 34865910
Alignment:
Q  233 aacacttgatcagtgcgcatgtctctatgcatgagccggattagtcg 279  Q
    |||||||||||||||| |||| ||||||||| ||||| |||||||||    
T  34865956 aacacttgatcagtgcacatgcctctatgcacgagccagattagtcg 34865910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 314
Target Start/End: Complemental strand, 48224854 - 48224729
Alignment:
Q  188 caaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccat 287  Q
    |||||||||||||  | |||| || | || ||||||| ||||| |||| |||||||||||||||||| |||| | ||||| |  ||||||| | || | |    
T  48224854 caaggacgtatccagggaatatcgagttcaatttccatgggaa-caacgcttgatcagtgcgcatgtatctacgtatgagtcaaattagtccttcatctt 48224756  T
Q  288 tggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||||||| |||||  |||||||||    
T  48224755 tggtgggtcgaaaaccaatgcgaaagc 48224729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 42
Target Start/End: Complemental strand, 8792521 - 8792493
Alignment:
Q  14 ttgtatcaaatggttgttcaaatatcatt 42  Q
    |||||||||||||||||||||||||||||    
T  8792521 ttgtatcaaatggttgttcaaatatcatt 8792493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 92; Significance: 1e-44; HSPs: 74)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 42086297 - 42086436
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||| ||||| ||||||||| |||||| ||||||| |||||| ||||| ||||||||||| ||||| ||||||||||||||    
T  42086297 aaggagctccttccaaggacgtacccgaggaataccgggttcgattcccagggggaacaacgcttgaccagtgcgcatgcctctacgcatgagccggatt 42086396  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  42086397 agtcgtccacctttggtgggtcggaaaccggtgcgaaagc 42086436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 1538401 - 1538540
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| | ||||||||| || | ||||||||| |||||| ||||||| |||||||||||  ||||||||||| ||||| ||||||||||||||    
T  1538401 aaggagctccttccgaggacgtattcggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggatt 1538500  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  1538501 aatcgtccaccattggtgggtcggaaaccggtgcgaaagc 1538540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 19572694 - 19572833
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||||||| | ||||||||| | |||| ||||||| |||||||||||  ||||||||||| ||||| ||||||||||||||    
T  19572694 aaggagctccttccaaggacgtatccggggaataccgggttagattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggatt 19572793  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||| |||||||||||||| ||||||| ||||||||||    
T  19572794 agtcgttcaccattggtgggttggaaaccagtgcgaaagc 19572833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 175 - 312
Target Start/End: Original strand, 20525808 - 20525945
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| |||||||||| ||||||| | |||| |||| |||||| ||||| | ||||||||||   ||||||||||| ||||| ||||||||||||||    
T  20525808 aaggagctcctttcaaggatgtatccggggaatatcgggttcgattcccaggtggaacaacacttcgccagtgcgcatgcctctacgcatgagccggatt 20525907  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaa 312  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  20525908 agtcgtccaccattggtggatcggaaaccggtgcgaaa 20525945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 42861355 - 42861216
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    ||||||||  || ||||||| |||||| | |||| |||| || ||||||  |||||||||||||||  ||||||||||| ||||| ||||||||||||||    
T  42861355 aaggagctcattccaaggacatatccggggaatatcgggttcaatttcccagggaaacaacacttggccagtgcgcatgcctctacgcatgagccggatt 42861256  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    | ||||||||||||||||||||||| ||||||||||||||    
T  42861255 aatcgtccaccattggtgggtcggagaccggtgcgaaagc 42861216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 175 - 313
Target Start/End: Complemental strand, 14588754 - 14588616
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    ||||||||||||||||||||||||| | | |||| |||| ||||||| |||| | || ||| ||||| ||||||||||| ||||| ||||||||||||||    
T  14588754 aaggagcttctttcaaggacgtatctggggaatatcgggttcgattttcaggaggaataacgcttgaccagtgcgcatgcctctacgcatgagccggatt 14588655  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    ||||||||||| |||||| | || |||||||||||||||    
T  14588654 agtcgtccacctttggtgagccgaaaaccggtgcgaaag 14588616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 205 - 314
Target Start/End: Original strand, 9805004 - 9805113
Alignment:
Q  205 aataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccg 304  Q
    ||||||||| |||||| ||||||| |||||| ||||  ||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||| |    
T  9805004 aataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaacag 9805103  T
Q  305 gtgcgaaagc 314  Q
    ||||||||||    
T  9805104 gtgcgaaagc 9805113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 8513489 - 8513628
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||| ||| | ||||||||| |||||| | |||||||||||  ||||  |||||| |||| ||||| ||| ||||| ||||    
T  8513489 aaggagctccttccaaggacgtacccggggaataccgggttcgattcctaggggaaacaatgcttggccagtgcacatgcctctacgcacgagccagatt 8513588  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  8513589 agtcgtccacctttggtgggtcggaaaccggtgcgaaagc 8513628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 18136417 - 18136274
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccgg--- 271  Q
    |||||||| ||| ||| ||||||||||   ||||||||| |||||| ||||||| ||||||||||| |||||| ||||| |||||  ||||||||||       
T  18136417 aaggagctccttccaaagacgtatccggagaataccgggttcgattcccagggggaacaacacttggtcagtgtgcatgcctctacacatgagccggatt 18136318  T
Q  272 -attagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
     ||||||||||||||||||||||||||||||||||||| |||||    
T  18136317 aattagtcgtccaccattggtgggtcggaaaccggtgcaaaagc 18136274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 192 - 314
Target Start/End: Original strand, 23383644 - 23383766
Alignment:
Q  192 gacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggt 291  Q
    |||||||| ||| ||||||||| |||||| ||||||| |||||| ||||  |||||||| || ||||| |||||||| |||||||||||||||| |||||    
T  23383644 gacgtatcagaggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcttgcctctacgcatgagctggattagtcgtccacctttggt 23383743  T
Q  292 gggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||| |||||||||||    
T  23383744 gggtcggaaactggtgcgaaagc 23383766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 5732057 - 5731918
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||| ||| | ||||||||| |||||| ||||| | |||||| ||||  ||||||||||| ||||| | ||||||| ||||    
T  5732057 aaggagctccttccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgtatgagccagatt 5731958  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||| |||| || |||||||||||||||||||||||||    
T  5731957 agtcgttcacctttagtgggtcggaaaccggtgcgaaagc 5731918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 12704984 - 12705123
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||| ||| | ||||||||| |||||| | ||| | |||||| ||||| ||||| |||||  |||| |||||| |||||||    
T  12704984 aaggagctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttgaccagtgtgcatgcttctacgcatgaaccggatt 12705083  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||| ||||| |||||||||| |||||||||||||||||    
T  12705084 agtcgcccacctttggtgggtcagaaaccggtgcgaaagc 12705123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 187 - 314
Target Start/End: Complemental strand, 24653936 - 24653810
Alignment:
Q  187 tcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccacca 286  Q
    ||||||||||||||| | ||||  ||| ||||||| |||||  ||||||||||| |||||||||||  ||||| |||| |||||||||| ||||||||||    
T  24653936 tcaaggacgtatccggggaatatagggttcgattttcagggagaacaacacttggtcagtgcgcatacctctacgcat-agccggattaatcgtccacca 24653838  T
Q  287 ttggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||| |||||| |||||||||    
T  24653837 ttggtgggtcgaaaaccgatgcgaaagc 24653810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 30349549 - 30349688
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||| | ||| |||||||||||||| | ||||||||| | |||||| ||||| |||||   |||  ||||||||||| |||||||||||||| | |||    
T  30349549 aaggagttccttccaaggacgtatccggggaataccgggtttgatttctagggggaacaatgattggccagtgcgcatgcctctatgcatgagctgaatt 30349648  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||| | |||||| |||||||||||||||||||    
T  30349649 agtcgtccaccttaggtgggccggaaaccggtgcgaaagc 30349688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 41163596 - 41163458
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||| ||||| ||| | ||||||||| |||||| ||||||||| ||||  |||  |||||| |||||||||| |||||||| |||||    
T  41163596 aaggagctccttccaagaacgtacccggggaataccgggttcgattcccaggggaa-caacgtttggccagtgcacatgtctctacgcatgagctggatt 41163498  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||| || ||||||||||||| |||||||||||    
T  41163497 agtcgtccaccttttgtgggtcggaaactggtgcgaaagc 41163458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 188 - 314
Target Start/End: Complemental strand, 4016379 - 4016253
Alignment:
Q  188 caaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccat 287  Q
    |||||||||| | |||||||| |||| ||||||  |||||| |||||||||||  ||||||||||| |||||  || ||||||||||||| |  ||||||    
T  4016379 caaggacgtacctgagaaatatcgggttcgattatcagggggaacaacacttggccagtgcgcatgcctctacacacgagccggattagttgctcaccat 4016280  T
Q  288 tggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||||||||||||| ||||||||||    
T  4016279 tggtgggtcggaaaccagtgcgaaagc 4016253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 175 - 313
Target Start/End: Complemental strand, 25417320 - 25417182
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| ||||||||||  || | ||||||||| |||||| ||||||| |||||| ||||  ||||||||||| ||||| | | ||||||||||    
T  25417320 aaggagctccttccaaggacgtactcggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgaacgagccggatt 25417221  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    |||| |  |||||||||||||| ||||||||||||||||    
T  25417220 agtcatttaccattggtgggtcagaaaccggtgcgaaag 25417182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 178 - 314
Target Start/End: Original strand, 5079304 - 5079439
Alignment:
Q  178 gagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagt 277  Q
    ||||| ||| |||| ||||||||| | ||||||||||| |||||||||||| |||| | |||| ||| ||||||||  |||| ||| |||||||||||||    
T  5079304 gagctccttccaagcacgtatccgtggaataccggggttgatttccagggggaacagcgcttggtcaatgcgcatgcttctacgcacgagccggattagt 5079403  T
Q  278 cgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    || ||||| ||||| ||||| ||||||||||||||||    
T  5079404 cgcccacctttggt-ggtcgaaaaccggtgcgaaagc 5079439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 230 - 314
Target Start/End: Original strand, 20255394 - 20255478
Alignment:
Q  230 aacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||||||||| ||||||||||| ||||| ||||||| ||||||||||||||||| |||||| ||||||||| |||||||||||    
T  20255394 aacaacacttgaccagtgcgcatgcctctacgcatgagtcggattagtcgtccacctttggtgagtcggaaactggtgcgaaagc 20255478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 9812842 - 9812981
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||| ||| | ||||||||| |||||| | ||| | |||||| ||||  ||||| |||||  |||| |||||| |||||||    
T  9812842 aaggagctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttggccagtgtgcatgcttctacgcatgaaccggatt 9812941  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||| ||||| |||||||||| |||||||||||||||||    
T  9812942 agtcgcccacctttggtgggtcagaaaccggtgcgaaagc 9812981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 13664230 - 13664369
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| ||||||||||||   | ||||||||  ||||||  |||||| |||||||||||  ||||||||||| ||||| ||||||||| ||||    
T  13664230 aaggagctccttccaaggacgtatctagggaataccggattcgattatcagggggaacaacacttggccagtgcgcatgcctctacgcatgagccagatt 13664329  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    | |||  |||| |||||| |||||||||||||||||||||    
T  13664330 aatcgatcacctttggtgtgtcggaaaccggtgcgaaagc 13664369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 38897855 - 38897717
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    ||||||||  || |||||||||||  | | ||||||||| |||||||||||||||| |||| ||||  ||||||||||| ||||| ||| ||||||||||    
T  38897855 aaggagctctttacaaggacgtatatggggaataccgggttcgatttccaggggaa-caacgcttggccagtgcgcatgcctctacgcacgagccggatt 38897757  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||| | ||||| ||||||| ||||||||| ||||||||||    
T  38897756 agttgcccacctttggtggatcggaaaccagtgcgaaagc 38897717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 223 - 314
Target Start/End: Complemental strand, 39099868 - 39099777
Alignment:
Q  223 caggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||| |||||||||||  |||||| |||| ||||| ||||||||||||||||||| ||||| |||||||||||||||||||||| |||||    
T  39099868 cagggggaacaacacttggccagtgcacatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcaaaagc 39099777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 215 - 314
Target Start/End: Original strand, 40117425 - 40117524
Alignment:
Q  215 tcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||||||||||| |||||| ||||  ||||||||||| ||||| ||||||||||||||| |||| |||| ||||||| ||| ||||||||||||||||    
T  40117425 tcgatttccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattaatcgttcacctttggtggatcgaaaaccggtgcgaaagc 40117524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 175 - 313
Target Start/End: Complemental strand, 11845938 - 11845800
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||| |||||||||| |||| |||||||| ||||| ||||||  |||  ||||||||||| ||||| | |||||||| |||    
T  11845938 aaggagctccttccaaggacgtacccgagaaatatcgggttcgatttcgagggggaacaacgtttggccagtgcgcatgcctctacgtatgagccgaatt 11845839  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    | ||| ||||| ||| ||||| ||||||||||| |||||    
T  11845838 aatcgcccacctttgatgggttggaaaccggtgtgaaag 11845800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 304
Target Start/End: Original strand, 15034048 - 15034174
Alignment:
Q  178 gagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagt 277  Q
    ||||| ||| |||||| ||| ||| | ||||||||| || ||||||| ||||||||||||||| |||||| ||||| ||||| ||||||||| |||||||    
T  15034048 gagctccttccaaggatgtacccggggaataccgggttcaatttccatgggaaacaacacttggtcagtgtgcatgcctctacgcatgagcctgattagt 15034147  T
Q  278 cgtccaccattggtgggtcggaaaccg 304  Q
     ||||||| ||| ||| ||||||||||    
T  15034148 tgtccacctttgatggatcggaaaccg 15034174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 155 - 313
Target Start/End: Original strand, 20692877 - 20693041
Alignment:
Q  155 aatcaagttgtttgggctcta------aggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgc 248  Q
    |||||||||||||||||||||      | ||||||||| |||||||||| ||| | ||||||||| | |||| | || ||||||||| ||||  |||| |    
T  20692877 aatcaagttgtttgggctctagtggcaaagagcttcttccaaggacgtacccggggaataccgggtttgattcctagaggaaacaacgcttggccagtac 20692976  T
Q  249 gcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
     |||| |||| |||||||  | ||||||| ||||||| |||||||||||||||||||||||||||    
T  20692977 acatgcctctgtgcatgattcagattagttgtccacctttggtgggtcggaaaccggtgcgaaag 20693041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 7866551 - 7866690
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||| ||||| ||||||||| |||||| | ||| | |||||| ||||  ||||| ||||| ||||| ||| || |||||||    
T  7866551 aaggagctccttccaaggacgtacccgaggaataccgggttcgattccgaggaggaacaacgcttggccagtgtgcatgcctctacgcacgaaccggatt 7866650  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||| ||||| |||||||||  |||||| ||||||||||    
T  7866651 agtcgcccacctttggtgggttagaaaccagtgcgaaagc 7866690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 188 - 306
Target Start/End: Complemental strand, 35813122 - 35813004
Alignment:
Q  188 caaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccat 287  Q
    |||||||||| ||||| ||||||||| |||||| | |||||||| ||  ||||| |||||||||||||||||  |||||| ||||||||||||||||| |    
T  35813122 caaggacgtacccgaggaataccgggttcgattcctaggggaaataatgcttgaccagtgcgcatgtctctacacatgagtcggattagtcgtccacctt 35813023  T
Q  288 tggtgggtcggaaaccggt 306  Q
    ||  | |||| ||||||||    
T  35813022 tgaagtgtcgaaaaccggt 35813004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 189 - 314
Target Start/End: Original strand, 12081892 - 12082017
Alignment:
Q  189 aaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccatt 288  Q
    ||||||||||||| | ||||| ||| ||||||  |||||| |||||| ||||  |||||||||||  |||| ||| |||||| |||||||||||||| ||    
T  12081892 aaggacgtatccggggaatactgggttcgattctcagggggaacaacgcttggccagtgcgcatgcatctacgcacgagccgaattagtcgtccaccttt 12081991  T
Q  289 ggtgggtcggaaaccggtgcgaaagc 314  Q
    |||| |||||||| ||||| ||||||    
T  12081992 ggtgagtcggaaatcggtgtgaaagc 12082017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 217 - 314
Target Start/End: Complemental strand, 20682712 - 20682615
Alignment:
Q  217 gatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||||||||| |||||| ||||  ||||||||||| ||||| ||| ||||||||||| ||| ||||| || |||||| ||||||||||||||||||    
T  20682712 gatttccagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattaatcgaccacctttagtgggttggaaaccggtgcgaaagc 20682615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 203 - 314
Target Start/End: Original strand, 14728080 - 14728192
Alignment:
Q  203 gaaataccggggtcgatttccaggggaa-acaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaa 301  Q
    ||||||||||  ||||||| ||||||   ||||| |||| |||||||||||| ||||| ||||||||||||||||| |  |||| ||| |||||||||||    
T  14728080 gaaataccggattcgattttcagggggggacaacgcttggtcagtgcgcatgcctctacgcatgagccggattagttgctcacctttgatgggtcggaaa 14728179  T
Q  302 ccggtgcgaaagc 314  Q
    |||||||||||||    
T  14728180 ccggtgcgaaagc 14728192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 12766101 - 12766240
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||| ||| | ||||||||| ||||||   ||| | |||||  ||||  ||||| ||||| ||||| |||||| || ||||    
T  12766101 aaggagctccttccaaggacgtacccggggaataccgggttcgattctgaggaggaacaatgcttggccagtgtgcatgcctctacgcatgaaccagatt 12766200  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||| ||||| |||||||||| |||||||||||||||||    
T  12766201 agtcgcccacctttggtgggtcagaaaccggtgcgaaagc 12766240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 205 - 312
Target Start/End: Complemental strand, 42291612 - 42291505
Alignment:
Q  205 aataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccg 304  Q
    ||||||||| | |||| ||||||  |||||| ||||  |||||| |||| ||||| ||| ||||||||||||||||||||| ||| ||| ||||||||||    
T  42291612 aataccgggtttgattcccagggtgaacaacgcttggccagtgcacatgcctctacgcacgagccggattagtcgtccacctttgatggatcggaaaccg 42291513  T
Q  305 gtgcgaaa 312  Q
    ||||||||    
T  42291512 gtgcgaaa 42291505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 184 - 314
Target Start/End: Original strand, 41800956 - 41801086
Alignment:
Q  184 ctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtcca 283  Q
    ||||||| |||||||| | | |||| |||| ||||||  || ||| |||||| ||||| || |||||||||||||| ||| |||||||||||||||| ||    
T  41800956 ctttcaatgacgtatctggggaatatcgggttcgattctcaaggggaacaacgcttgaccaatgcgcatgtctctacgcacgagccggattagtcgttca 41801055  T
Q  284 ccattggtgggtcggaaaccggtgcgaaagc 314  Q
     | ||| ||||||||||| ||||| ||||||    
T  41801056 tctttgatgggtcggaaagcggtgtgaaagc 41801086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 189 - 314
Target Start/End: Original strand, 7336604 - 7336728
Alignment:
Q  189 aaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccatt 288  Q
    ||||||||||||||| |||| |||| |||||||| | ||  |||||| ||| ||||||||||||| ||||| ||| ||||||||||| ||||| ||| ||    
T  7336604 aaggacgtatccgaggaatatcgggttcgatttctaaggagaacaacgctttatcagtgcgcatgcctctacgcacgagccggattaatcgtctaccttt 7336703  T
Q  289 ggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||| |   ||||||||||||||||    
T  7336704 ggtggat-aaaaaccggtgcgaaagc 7336728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 188 - 313
Target Start/End: Original strand, 21149717 - 21149842
Alignment:
Q  188 caaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccat 287  Q
    |||||||||||  ||| |||||| || ||||||| |||||| ||||||  |||| ||||||||||| ||||| ||| |||  |||||||||| |||||||    
T  21149717 caaggacgtatttgaggaataccaggttcgattttcagggggaacaacgtttgaccagtgcgcatgactctacgcacgagttggattagtcgcccaccat 21149816  T
Q  288 tggtgggtcggaaaccggtgcgaaag 313  Q
    |||||| | | |||||| ||||||||    
T  21149817 tggtggatagaaaaccgatgcgaaag 21149842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 261 - 314
Target Start/End: Original strand, 36783299 - 36783352
Alignment:
Q  261 gcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  36783299 gcatgagccggattagtcgtccaccattggtgggttggaaaccggtgcaaaagc 36783352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 230 - 314
Target Start/End: Complemental strand, 3653996 - 3653912
Alignment:
Q  230 aacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||| ||||| ||||||||||| ||||| ||| ||| ||||||||||||||||| ||||||| ||| |||||||||| |||||    
T  3653996 aacaacgcttgaccagtgcgcatgcctctacgcacgaggcggattagtcgtccacctttggtggatcgaaaaccggtgcaaaagc 3653912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 271
Target Start/End: Original strand, 28857098 - 28857194
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccgg 271  Q
    |||||||| ||| |||||||| | ||| | ||||||||| |||||| ||||||| |||||||||||  ||||||||||| ||||| |||||||||||    
T  28857098 aaggagctccttccaaggacgcacccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccgg 28857194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 23247488 - 23247350
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    ||||||||  || |||||||||| | | | |||| |||| |||||| ||||| | |||||| ||||||||||  ||||| ||||| ||| ||||| ||||    
T  23247488 aaggagctcattccaaggacgtacctggggaatatcgggttcgattcccaggaggaacaacgcttgatcagtatgcatgcctctacgcacgagccagatt 23247389  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||| ||| | ||||| ||||||||||||||||    
T  23247388 agtcgtccacctttgat-ggtcgaaaaccggtgcgaaagc 23247350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 255 - 314
Target Start/End: Original strand, 28857196 - 28857255
Alignment:
Q  255 ctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||| |||||||||||||||||||  |||| ||||||||||||||||||||||||||||    
T  28857196 ctctacgcatgagccggattagtcgctcacctttggtgggtcggaaaccggtgcgaaagc 28857255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 189 - 312
Target Start/End: Original strand, 37263225 - 37263347
Alignment:
Q  189 aaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccatt 288  Q
    ||||||||| ||| | |||| |||| ||||||  |||||||| |||| ||||  || |||||||| ||||| ||| ||||||||||||||||||||| ||    
T  37263225 aaggacgtacccggggaatatcgggttcgattctcaggggaa-caacgcttggccaatgcgcatgcctctacgcacgagccggattagtcgtccaccttt 37263323  T
Q  289 ggtgggtcggaaaccggtgcgaaa 312  Q
      ||| ||||||||||||||||||    
T  37263324 attggatcggaaaccggtgcgaaa 37263347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 243 - 314
Target Start/End: Original strand, 43399166 - 43399237
Alignment:
Q  243 cagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||| ||||| ||| |||| |||||||||||||||  ||||| ||||||||||||||||||||||    
T  43399166 cagtgcgcatgcctctacgcacgagcaggattagtcgtccacatttggttggtcggaaaccggtgcgaaagc 43399237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 314
Target Start/End: Complemental strand, 9168372 - 9168251
Alignment:
Q  192 gacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggt 291  Q
    |||||||||| | ||||||| |  ||||| |||| |||| |||| ||||  ||||||||||  ||||| ||||||||||||||||||||||||| || ||    
T  9168372 gacgtatccggggaataccgagaacgattcccagaggaa-caacgcttggccagtgcgcatacctctacgcatgagccggattagtcgtccacctttagt 9168274  T
Q  292 gggtcggaaaccggtgcgaaagc 314  Q
    |||||| ||| |||||| |||||    
T  9168273 gggtcgaaaatcggtgcaaaagc 9168251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 261 - 314
Target Start/End: Original strand, 28857005 - 28857058
Alignment:
Q  261 gcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||||||||||||||||  |||| ||||||||||||||||||||||||||||    
T  28857005 gcatgagccggattagtcgctcacctttggtgggtcggaaaccggtgcgaaagc 28857058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 175 - 279
Target Start/End: Complemental strand, 7308501 - 7308397
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    ||||||||  || |||||||||||  ||| |||| |||| |||||| ||||||| |||||| ||||  |||||| |||| ||||| ||||||||||||||    
T  7308501 aaggagctcattccaaggacgtatttgaggaatatcgggttcgattcccagggggaacaacgcttgggcagtgcacatgcctctacgcatgagccggatt 7308402  T
Q  275 agtcg 279  Q
    |||||    
T  7308401 agtcg 7308397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 230 - 314
Target Start/End: Original strand, 20590024 - 20590108
Alignment:
Q  230 aacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||| ||||  ||||||||||| ||||| |||||||||| |||||| |||||| ||||| || ||||||||||||||| ||||    
T  20590024 aacaacgcttggccagtgcgcatgactctacgcatgagccgtattagttgtccactattggaggatcggaaaccggtgcggaagc 20590108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 230 - 314
Target Start/End: Original strand, 21375376 - 21375460
Alignment:
Q  230 aacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||| |||| |||||||||||  |||| ||||||| ||||||||||||||| | ||| ||| ||||||||| ||||||||||    
T  21375376 aacaacatttgaccagtgcgcatgcttctacgcatgagtcggattagtcgtccatctttgatggatcggaaaccagtgcgaaagc 21375460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 314
Target Start/End: Complemental strand, 22655254 - 22655156
Alignment:
Q  215 tcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||| |||||||||||||   |||||||||| ||||| ||||| |||| || | ||||||||||||||| || |||||||| ||||| ||||||||||    
T  22655254 tcgattcccaggggaaacaatgtttgatcagtgtgcatgcctctacgcataagtcagattagtcgtccacc-tttgtgggtcgaaaaccagtgcgaaagc 22655156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 238 - 301
Target Start/End: Original strand, 24875378 - 24875441
Alignment:
Q  238 ttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaa 301  Q
    |||| ||||||||||||||||| ||| ||||||||||| ||||||||| ||| |||||||||||    
T  24875378 ttgaccagtgcgcatgtctctacgcacgagccggattaatcgtccacctttgatgggtcggaaa 24875441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 301
Target Start/End: Complemental strand, 35561952 - 35561829
Alignment:
Q  178 gagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagt 277  Q
    ||||| ||| ||| |||||||||| | |||| || | |||| |||||| || |||||||| ||| ||||||||||| |||||  |||||||| |||||||    
T  35561952 gagctccttccaatgacgtatccggggaatatcgagttcgacttccagagggaacaacacctgaccagtgcgcatgcctctacacatgagccagattagt 35561853  T
Q  278 cgtccaccattggtgggtcggaaa 301  Q
    ||  |||| ||||| |||||||||    
T  35561852 cgctcaccgttggtaggtcggaaa 35561829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 261 - 312
Target Start/End: Original strand, 40060340 - 40060391
Alignment:
Q  261 gcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 312  Q
    ||||||||||||||| ||||||||||||| ||||| ||||||||||||||||    
T  40060340 gcatgagccggattaatcgtccaccattgatgggttggaaaccggtgcgaaa 40060391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 313
Target Start/End: Complemental strand, 24463955 - 24463885
Alignment:
Q  243 cagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    ||||||||||| ||||||||| ||||||||||||||| ||||| ||  ||||||| |||||||||| ||||    
T  24463955 cagtgcgcatgcctctatgcacgagccggattagtcgcccacctttactgggtcgaaaaccggtgcaaaag 24463885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 314
Target Start/End: Complemental strand, 18262725 - 18262616
Alignment:
Q  205 aataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccg 304  Q
    ||||||||| || |||| |||||| |||||| ||||| ||||||||||  |||||  || ||||||||||||||| |||||  || ||| ||| ||| ||    
T  18262725 aataccgggttctattttcagggggaacaacgcttgaccagtgcgcatacctctacacacgagccggattagtcgcccacctctgatggatcgaaaatcg 18262626  T
Q  305 gtgcgaaagc 314  Q
    ||||||||||    
T  18262625 gtgcgaaagc 18262616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 189 - 293
Target Start/End: Complemental strand, 14974447 - 14974343
Alignment:
Q  189 aaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccatt 288  Q
    |||||||||||||   |||| |||| ||||||   | ||| ||||||| |||  |||||| |||| ||||| ||||||||||||||||||||||||| ||    
T  14974447 aaggacgtatccggagaatatcgggttcgattctaaaggggaacaacatttggccagtgcacatgcctctacgcatgagccggattagtcgtccaccttt 14974348  T
Q  289 ggtgg 293  Q
    |||||    
T  14974347 ggtgg 14974343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 261 - 313
Target Start/End: Original strand, 16755105 - 16755157
Alignment:
Q  261 gcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    ||||||| |||||||||||||||| ||||||||||  ||||||||||||||||    
T  16755105 gcatgagtcggattagtcgtccactattggtgggttagaaaccggtgcgaaag 16755157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 261 - 313
Target Start/End: Complemental strand, 25950645 - 25950593
Alignment:
Q  261 gcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    ||||||||||||||||||||||||| ||||||||||| ||| || ||||||||    
T  25950645 gcatgagccggattagtcgtccacctttggtgggtcgaaaatcgatgcgaaag 25950593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 249 - 313
Target Start/End: Complemental strand, 27648488 - 27648424
Alignment:
Q  249 gcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    ||||| ||||| | ||||||||||||||||||||| | ||||||| |||||||||| ||||||||    
T  27648488 gcatgcctctacgtatgagccggattagtcgtccatctttggtggatcggaaaccgatgcgaaag 27648424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 175 - 279
Target Start/End: Original strand, 30995091 - 30995195
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| ||||||||||   | | |||||| || |||||| ||||||| |||||||||||  ||| ||||||| ||||| ||| ||||||||||    
T  30995091 aaggagctccttccaaggacgtacatggggaataccaggttcgattcccagggggaacaacacttggccagggcgcatgcctctacgcacgagccggatt 30995190  T
Q  275 agtcg 279  Q
    |||||    
T  30995191 agtcg 30995195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 24498953 - 24499091
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||||| |   |||| |||| |||||||| | |  ||| ||| ||||||||||||||||| ||||| | | ||||||||||    
T  24498953 aaggagctccttccaaggacgtatctggagaatatcgggttcgatttctaaga-aaataacgcttgatcagtgcgcatgcctctacgtacgagccggatt 24499051  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    | | ||||| | ||||||||| |||||  |||||||||||    
T  24499052 aatagtccatctttggtgggttggaaattggtgcgaaagc 24499091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 303
Target Start/End: Complemental strand, 18294590 - 18294493
Alignment:
Q  205 aataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaacc 303  Q
    ||||||||| || || |||||||||| |||| |||| |||||||||||  |||||  ||||| |||||||| ||| ||| | |||||||||||||||||    
T  18294590 aataccgggttcaatatccaggggaa-caacgcttggtcagtgcgcatacctctacacatgaaccggattaatcgcccatctttggtgggtcggaaacc 18294493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 302
Target Start/End: Original strand, 32874798 - 32874884
Alignment:
Q  216 cgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaac 302  Q
    |||||| || ||| |||||| |||||  |||||||||  || || ||| |||||| |||| ||||||||||||||||||||||||||    
T  32874798 cgattttcaaggggaacaacgcttgactagtgcgcatacctttacgcacgagccgaattaatcgtccaccattggtgggtcggaaac 32874884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 249 - 314
Target Start/End: Original strand, 7616964 - 7617029
Alignment:
Q  249 gcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||| ||||| ||||||| | |||||||||||||  |||||||| |||||||| |||||||||||    
T  7616964 gcatgcctctacgcatgagtcagattagtcgtccattattggtggatcggaaactggtgcgaaagc 7617029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 314
Target Start/End: Original strand, 14152050 - 14152159
Alignment:
Q  205 aataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccg 304  Q
    ||||||||| ||||||  ||  || |||||| ||||  ||||| |||||  ||||| |||||||||||||| ||||||||||||| ||| ||| |||||     
T  14152050 aataccgggttcgattctcatagggaacaacgcttggccagtgtgcatgcttctatccatgagccggattaatcgtccaccattgatggatcgaaaacct 14152149  T
Q  305 gtgcgaaagc 314  Q
     |||||||||    
T  14152150 atgcgaaagc 14152159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 313
Target Start/End: Original strand, 2485236 - 2485304
Alignment:
Q  245 gtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    ||||||||| ||||| | ||||| |||||||||||  |||| ||| |||||||||||||| ||||||||    
T  2485236 gtgcgcatgcctctacgtatgagtcggattagtcgctcacctttgatgggtcggaaaccgatgcgaaag 2485304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 314
Target Start/End: Complemental strand, 17693405 - 17693338
Alignment:
Q  248 cgcatgtctctatgcatgagccggattagtcgtccaccatt-ggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||| ||||| ||||||||| ||||||||||||  | || ||||||| ||||||||||||||||||    
T  17693405 cgcatgcctctacgcatgagccagattagtcgtccgtcttttggtgggttggaaaccggtgcgaaagc 17693338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 44
Target Start/End: Original strand, 91365 - 91395
Alignment:
Q  14 ttgtatcaaatggttgttcaaatatcattgc 44  Q
    |||||||||||||||||||||||||||||||    
T  91365 ttgtatcaaatggttgttcaaatatcattgc 91395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 253
Target Start/End: Original strand, 1898971 - 1899049
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatg 253  Q
    |||||||| ||| |||||| ||| ||| | ||||||||| |||||| ||||||| |||||| ||||  |||||||||||    
T  1898971 aaggagctccttccaaggatgtacccggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcatg 1899049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 314
Target Start/End: Original strand, 27484188 - 27484270
Alignment:
Q  232 caacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||||||| ||||  ||||| ||||| |||||| ||||||||| |||||| | ||| | ||| ||||||||||| ||||||    
T  27484188 caacacttgaccagtatgcatgcctctacgcatgaaccggattagacgtccatctttgataggttggaaaccggtgtgaaagc 27484270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 314
Target Start/End: Original strand, 38369700 - 38369808
Alignment:
Q  205 aataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccg 304  Q
    |||| |||| ||||||  |||||||| |||||||||  ||||||||||| ||||| ||| ||| |||||||||   ||||| ||| |||||  |||| ||    
T  38369700 aatatcgggttcgattctcaggggaa-caacacttggccagtgcgcatgcctctacgcacgagtcggattagtaacccacctttgatgggttagaaatcg 38369798  T
Q  305 gtgcgaaagc 314  Q
    ||||||||||    
T  38369799 gtgcgaaagc 38369808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 314
Target Start/End: Original strand, 40773337 - 40773382
Alignment:
Q  269 cggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||||||||| || | |||||| |||||||||||||||||||||    
T  40773337 cggattagtcgttcatctttggtgcgtcggaaaccggtgcgaaagc 40773382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 259
Target Start/End: Complemental strand, 35403649 - 35403565
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctcta 259  Q
    |||||||| ||| ||||||||||  || ||||||||||| ||||||   ||||| |||||| ||||  || ||||||||||||||    
T  35403649 aaggagctccttccaaggacgtactcgggaaataccgggttcgattctaagggggaacaacgcttggccaatgcgcatgtctcta 35403565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 42
Target Start/End: Original strand, 39595424 - 39595452
Alignment:
Q  14 ttgtatcaaatggttgttcaaatatcatt 42  Q
    |||||||||||||||||||||||||||||    
T  39595424 ttgtatcaaatggttgttcaaatatcatt 39595452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 91; Significance: 4e-44; HSPs: 90)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 175 - 313
Target Start/End: Original strand, 29895761 - 29895899
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||||||| | ||||||||| |||||| ||||||| |||||||||||  ||||||||||| ||||| ||||||||||||||    
T  29895761 aaggagctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggatt 29895860  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  29895861 agtcgtccaccattggtggttcggaaaccggtgcgaaag 29895899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 175 - 312
Target Start/End: Complemental strand, 40780998 - 40780861
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    ||||||||||||| |||||||||| ||  ||||| |||| ||||||  || ||| |||||| |||| |||||||||||| ||||| ||||||||||||||    
T  40780998 aaggagcttcttttaaggacgtattcggaaaatatcgggttcgattctcaaggggaacaacgcttggtcagtgcgcatgcctctacgcatgagccggatt 40780899  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaa 312  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  40780898 agtcgtccacctttggtgggtcggaaaccggtgcgaaa 40780861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 175 - 307
Target Start/End: Original strand, 8888996 - 8889128
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| |||  ||||||||||||| | ||||||||| |||||| | ||||| |||||||||||  ||||||||||| ||||| ||||||||||||||    
T  8888996 aaggagctccttctaaggacgtatccggggaataccgggttcgattcctagggggaacaacacttgggcagtgcgcatggctctacgcatgagccggatt 8889095  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtg 307  Q
    ||||||||||| |||||||||||||||||||||    
T  8889096 agtcgtccacctttggtgggtcggaaaccggtg 8889128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 36145352 - 36145213
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    ||||||||  || |||||||||| ||| | ||||||||| |||||| |||||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  36145352 aaggagctcattccaaggacgtacccggggaataccgggttcgattcccaggggaaacaacgcttgatcagtgcgcatgcctctacacatgagccggatt 36145253  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||| ||| ||  ||||||||||||||||||||    
T  36145252 agtcgtccacctttgatgaatcggaaaccggtgcgaaagc 36145213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 38166001 - 38166140
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||||||| | ||||| ||| | |||| ||||||| |||||| ||||  ||||||||||| ||||| ||| ||||||||||    
T  38166001 aaggagctccttccaaggacgtatccggggaatactgggttggattcccagggggaacaacgcttggccagtgcgcatggctctacgcacgagccggatt 38166100  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||| ||||| ||||||||||||||||||||||||||||    
T  38166101 agtcgcccacctttggtgggtcggaaaccggtgcgaaagc 38166140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 55921008 - 55921147
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||| | ||| | ||||||||| |||||| ||||||| ||||||||||| |||||||||||| ||||| | ||||||||||||    
T  55921008 aaggagctccttccaaggacgcacccggggaataccgggttcgattcccagggggaacaacacttggtcagtgcgcatgcctctacgtatgagccggatt 55921107  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    | |||  |||| ||||||||||||||||||||||||||||    
T  55921108 aatcgctcacctttggtgggtcggaaaccggtgcgaaagc 55921147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 175 - 286
Target Start/End: Original strand, 1446800 - 1446911
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||||||| | ||||||||| |||||| ||||||| |||||||||||  ||||||||||| ||||| ||||||||||||||    
T  1446800 aaggagctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggatt 1446899  T
Q  275 agtcgtccacca 286  Q
    ||||||||||||    
T  1446900 agtcgtccacca 1446911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 6779185 - 6779324
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||||||| |||||||||| | |   ||||||||| |||||| ||||||| |||||||| ||  ||||||||||| ||||||||||||||||||||    
T  6779185 aaggagcttcttccaaggacgtacctggagaataccgggttcgattcccagggggaacaacacctggccagtgcgcatgcctctatgcatgagccggatt 6779284  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||| ||||||  |||||| ||| |||||||||    
T  6779285 agtcgtccacctttggtgaatcggaacccgatgcgaaagc 6779324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 47078432 - 47078571
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||| ||| | ||||||||| |||||| ||||||| |||||| ||||  |||||| |||| ||||| ||| ||||||||||    
T  47078432 aaggagctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacgcttggccagtgcacatgcctctacgcacgagccggatt 47078531  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||  |||||||||||||||||||||| ||||||||||    
T  47078532 agtcgctcaccattggtgggtcggaaaccagtgcgaaagc 47078571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 175 - 313
Target Start/End: Original strand, 15829673 - 15829811
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||||||||||||||||||||||   |||| |  | | ||||| |||||||| |||||||||  |||||||||||  |||| ||||||||||||||    
T  15829673 aaggagcttctttcaaggacgtatccggagaatatccagtttgattttcaggggaatcaacacttggccagtgcgcatgcttctaggcatgagccggatt 15829772  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    |||| |||||||||||||| || ||||||||||||||||    
T  15829773 agtcctccaccattggtggatcagaaaccggtgcgaaag 15829811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 176 - 313
Target Start/End: Complemental strand, 42722514 - 42722378
Alignment:
Q  176 aggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatta 275  Q
    ||||||| ||||||| || ||| ||| | ||||||||| | |||| ||||||||| |||||||||| ||||||||||  ||||||||||||| |||||||    
T  42722514 aggagctcctttcaaagatgtacccggggaataccgggtttgattcccaggggaa-caacacttgaccagtgcgcatacctctatgcatgagtcggatta 42722416  T
Q  276 gtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    ||||||||||| |||||||||| ||| |||||||||||    
T  42722415 gtcgtccaccaatggtgggtcgaaaatcggtgcgaaag 42722378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 176 - 313
Target Start/End: Complemental strand, 42722713 - 42722576
Alignment:
Q  176 aggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatta 275  Q
    ||||||| ||| |||||||||| ||| ||||||||||| || ||| ||||| | |||||| ||||  ||||||||||| ||||| |||||||||||||||    
T  42722713 aggagctccttccaaggacgtacccgggaaataccgggttcaattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggatta 42722614  T
Q  276 gtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    ||||| |||| || |||||||| |||||||||||||||    
T  42722613 gtcgttcacctttagtgggtcgaaaaccggtgcgaaag 42722576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 5472985 - 5472846
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    ||||||||  ||||||||||||||||| | |||||| || | ||||  ||||||||||||| ||||  ||||||||||| ||||| ||| ||||||||||    
T  5472985 aaggagctcatttcaaggacgtatccggggaataccaggtttgattctcaggggaaacaacgcttggccagtgcgcatgcctctacgcacgagccggatt 5472886  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||| ||||| ||||||||||| |||| |||||||||||    
T  5472885 agtcgcccacctttggtgggtcgaaaactggtgcgaaagc 5472846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 188 - 314
Target Start/End: Complemental strand, 3159593 - 3159467
Alignment:
Q  188 caaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccat 287  Q
    ||||||||||||||   ||||||||| |||| ||||||||| |||||| ||||  ||||||||||| ||||| ||| ||||| |||||||||  ||||||    
T  3159593 caaggacgtatccggagaataccgggttcgacttccagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccagattagtcgctcaccat 3159494  T
Q  288 tggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||||||||||||| |||||    
T  3159493 tggtgggtcggaaaccggtgcaaaagc 3159467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 188 - 313
Target Start/End: Complemental strand, 7246770 - 7246645
Alignment:
Q  188 caaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccat 287  Q
    |||||||||| ||| | ||||| ||| |||||| | || || |||||| ||||  ||||||||||| ||||| ||||||||||||||||||| ||||| |    
T  7246770 caaggacgtacccggggaatactgggttcgattcctagtgggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcccacctt 7246671  T
Q  288 tggtgggtcggaaaccggtgcgaaag 313  Q
    ||||||||||||||||||||||||||    
T  7246670 tggtgggtcggaaaccggtgcgaaag 7246645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 188 - 313
Target Start/End: Original strand, 43468334 - 43468459
Alignment:
Q  188 caaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccat 287  Q
    |||| ||||| ||| | ||||||||| |||||| ||||||| |||||| ||||  |||||| ||| |||||| ||||||||||||||||||| ||||||     
T  43468334 caagaacgtacccggggaataccgggttcgattcccagggggaacaacgcttggccagtgcacatttctctacgcatgagccggattagtcgcccaccag 43468433  T
Q  288 tggtgggtcggaaaccggtgcgaaag 313  Q
    |||||||||||| |||||||||||||    
T  43468434 tggtgggtcggagaccggtgcgaaag 43468459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 215 - 314
Target Start/End: Original strand, 4738632 - 4738731
Alignment:
Q  215 tcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||||||||| | |||||| |||   ||||||||||||||||| |||||||| | |||||||||||||| ||||||||||||||||||||||||||||    
T  4738632 tcgatttccaggaggaacaacgctttgccagtgcgcatgtctctacgcatgagctgaattagtcgtccacctttggtgggtcggaaaccggtgcgaaagc 4738731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 20421748 - 20421886
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||||||| |||||||| | | ||||| ||  |||||||||||||| |||||||||||  ||||||||||| ||||| ||||||||| ||||    
T  20421748 aaggagctcctttcaaagacgtatctggggaatactggt-tcgatttccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccagatt 20421846  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    | ||||||| ||||| ||||||||||||| || |||||||    
T  20421847 aatcgtccatcattgatgggtcggaaaccagttcgaaagc 20421886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 38075407 - 38075546
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||| | ||| ||||||||||| ||   ||||||||| ||||||  ||||||||||||| ||||  ||||||||||| ||||| |||||||||| |||    
T  38075407 aaggagttccttccaaggacgtattcggagaataccgggttcgattctcaggggaaacaacgcttggccagtgcgcatgcctctacgcatgagccgaatt 38075506  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    | | ||||||| |||||||||||||||||| |||||||||    
T  38075507 aattgtccacctttggtgggtcggaaaccgatgcgaaagc 38075546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 52950056 - 52950195
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||| | | | |||| |||| |||||| ||||||| |||||| ||||  ||||||||||| |||||  ||||| || ||||    
T  52950056 aaggagctccttccaaggacgtacctggggaatatcgggttcgattcccagggggaacaacgcttggccagtgcgcatgactctacacatgaaccagatt 52950155  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||| |||||||||||||||||| |||||||||    
T  52950156 agtcgtccacctttggtgggtcggaaaccgatgcgaaagc 52950195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 53599034 - 53599173
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||| ||| | ||||||||| |||||| ||||| | ||||||  |||  ||||||||||| ||||| ||||||||||||||    
T  53599034 aaggagctccttccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgtttggccagtgcgcatgcctctacgcatgagccggatt 53599133  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    | |||| |||| || |||| ||||||||||||||||||||    
T  53599134 aatcgttcacctttagtggatcggaaaccggtgcgaaagc 53599173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 175 - 310
Target Start/End: Complemental strand, 1940911 - 1940779
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||| ||| |||||| |||| |||||| ||||||| |||||| ||||    ||||||||| ||||| ||| ||||||||||    
T  1940911 aaggagctccttccaaggacgtacccgggaaatatcgggttcgattcccagggggaacaacgcttgg---gtgcgcatgcctctacgcacgagccggatt 1940815  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcga 310  Q
    ||||| ||||| ||||||||||| ||||||||||||    
T  1940814 agtcgcccacctttggtgggtcgaaaaccggtgcga 1940779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 175 - 312
Target Start/End: Original strand, 33647695 - 33647832
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| |||||||||||||||| | | ||||||||| |||||||||||||  |||||| ||||| |||||| |||  ||||| ||| || || ||||    
T  33647695 aaggagctcctttcaaggacgtatctggggaataccgggttcgatttccagggagaacaacgcttgaccagtgcacattcctctacgcacgaaccagatt 33647794  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaa 312  Q
    |||||| || | ||||||| ||||||||||||||||||    
T  33647795 agtcgttcatctttggtggatcggaaaccggtgcgaaa 33647832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 178 - 313
Target Start/End: Original strand, 2559284 - 2559419
Alignment:
Q  178 gagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagt 277  Q
    ||||| ||| |||||||||| | | | ||||||||  |||||||| ||| | |||||| ||||  ||||||||||| ||||| |||  |||||||||| |    
T  2559284 gagctccttccaaggacgtacctggggaataccggattcgatttctaggaggaacaacgcttggccagtgcgcatgcctctacgcacaagccggattact 2559383  T
Q  278 cgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    |||||||| |||||||||||||||||||||||||||    
T  2559384 cgtccacctttggtgggtcggaaaccggtgcgaaag 2559419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 215 - 314
Target Start/End: Original strand, 16450314 - 16450413
Alignment:
Q  215 tcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||| ||||||| |||||| ||||  |||||| |||| ||||| ||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||    
T  16450314 tcgattcccagggggaacaacgcttggccagtgcacatgcctctacgcatgagccagattagtcgtccacctttggtaggtcggaaaccggtgcgaaagc 16450413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 20128283 - 20128422
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||| | ||| |||||||||||||| | ||||| ||| ||||||  |||||| |||||  ||||  ||||||||||| || || ||| ||||  ||||    
T  20128283 aaggagttccttccaaggacgtatccggggaatactgggttcgattctcagggggaacaatgcttggccagtgcgcatgcctttacgcacgagctagatt 20128382  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  20128383 agtcgtccaccattggtgggtcagaaaccggtgcgaaagc 20128422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 203 - 314
Target Start/End: Original strand, 29588738 - 29588849
Alignment:
Q  203 gaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaac 302  Q
    ||||||||||| |||||| |||||||||||||  ||||   |||||||||| ||||| ||| |||||||||||||  ||||||||||||||||||||||     
T  29588738 gaaataccgggttcgattcccaggggaaacaaagcttggctagtgcgcatgcctctacgcacgagccggattagttatccaccattggtgggtcggaaat 29588837  T
Q  303 cggtgcgaaagc 314  Q
    || |||||||||    
T  29588838 cgatgcgaaagc 29588849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 41163019 - 41162880
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||||||| ||||||||| | ||||||||||| || |||||||||||  |||||  ||||  ||||||||||||||| |||    
T  41163019 aaggagctccttccaaggacgtatccgggaaataccgagttcgatttccagagggaacaacacttggccagtgtacatgcttctatgcatgagccgaatt 41162920  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||| ||||| ||| ||| |||||||  || ||||||||    
T  41162919 agtcgcccacctttgatggatcggaaattggagcgaaagc 41162880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 205 - 313
Target Start/End: Complemental strand, 8064905 - 8064797
Alignment:
Q  205 aataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccg 304  Q
    ||||| ||| |||||| ||| ||| || ||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||  | ||||| ||||||    
T  8064905 aatactgggttcgattcccaaggggaataacacttgaccagtgcgcatgcctctacgcatgagccggattagtcgtccaccattaataggtcgaaaaccg 8064806  T
Q  305 gtgcgaaag 313  Q
    |||| ||||    
T  8064805 gtgcaaaag 8064797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 205 - 313
Target Start/End: Original strand, 14124020 - 14124128
Alignment:
Q  205 aataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccg 304  Q
    |||||| || |||||| ||||||| ||||||| |||  ||||||||||| |||||  || |||||||||||||||  |||||||||||||| ||||||||    
T  14124020 aataccaggttcgattcccagggggaacaacatttggccagtgcgcatgcctctacacacgagccggattagtcgctcaccattggtgggttggaaaccg 14124119  T
Q  305 gtgcgaaag 313  Q
    |||||||||    
T  14124120 gtgcgaaag 14124128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 222 - 314
Target Start/End: Original strand, 18531540 - 18531632
Alignment:
Q  222 ccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||| ||||||||||| |||||||||||| ||| ||||| || || ||||| ||||||||| || |||||||||||||||||||||||||    
T  18531540 ccagggggaacaacacttggtcagtgcgcatgcctccatgcacgaaccagattattcgtccaccttttgtgggtcggaaaccggtgcgaaagc 18531632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 24850763 - 24850625
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    ||||||||  || |||||||||||||| |||||||| |  || |||  |||||||| |||||||||| ||||||||||| ||||| |||||||| |||||    
T  24850763 aaggagctcattccaaggacgtatccgggaaataccagattcaattatcaggggaa-caacacttgaccagtgcgcatgcctctacgcatgagctggatt 24850665  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    | || |||||||||  ||| |||||||||| |||||||||    
T  24850664 attcatccaccattattggatcggaaaccgatgcgaaagc 24850625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 178 - 312
Target Start/End: Complemental strand, 26237554 - 26237422
Alignment:
Q  178 gagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagt 277  Q
    ||||| |||||||| ||||| |||||   ||| ||| ||||||  |||||||||||||  |||||||||||| |||||| || ||||||| |||||||||    
T  26237554 gagctcctttcaagaacgtacccgagg--tactgggttcgattctcaggggaaacaacgtttgatcagtgcgtatgtctttacgcatgagtcggattagt 26237457  T
Q  278 cgtccaccattggtgggtcggaaaccggtgcgaaa 312  Q
     ||||||||||| |||||||||||| | |||||||    
T  26237456 agtccaccattgatgggtcggaaactgatgcgaaa 26237422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 313
Target Start/End: Complemental strand, 2686552 - 2686454
Alignment:
Q  215 tcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    ||||||| ||||||||||||||||||| || | |  |||||||||  ||||||||| |||||||||||||| || |||||| |||||||||||||||||    
T  2686552 tcgattttcaggggaaacaacacttgaccactacatatgtctctacacatgagccgaattagtcgtccaccttttgtgggttggaaaccggtgcgaaag 2686454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 303
Target Start/End: Complemental strand, 40272469 - 40272340
Alignment:
Q  174 taaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggat 273  Q
    |||||||||  || ||| || ||||||| | |||| |||| |||||||||| ||| |||||| ||||  ||||||||||| ||||| |||| || |||||    
T  40272469 taaggagctctttccaatgatgtatccggggaatatcgggttcgatttccatggggaacaacgcttggccagtgcgcatgcctctacgcataagtcggat 40272370  T
Q  274 tagtcgtccaccattggtgggtcggaaacc 303  Q
    | ||||| ||||||||||||||||||||||    
T  40272369 ttgtcgttcaccattggtgggtcggaaacc 40272340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 205 - 314
Target Start/End: Complemental strand, 48834806 - 48834698
Alignment:
Q  205 aataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccg 304  Q
    ||||||||| ||||||||||||||||  || ||| |  |||||| |||| |||||| |||||| ||||||||||| | ||| ||||||||||||||||||    
T  48834806 aataccgggttcgatttccaggggaat-aatactaggccagtgcacatgcctctatacatgagtcggattagtcgcctacctttggtgggtcggaaaccg 48834708  T
Q  305 gtgcgaaagc 314  Q
    ||||||||||    
T  48834707 gtgcgaaagc 48834698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 179 - 311
Target Start/End: Original strand, 21429279 - 21429411
Alignment:
Q  179 agcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtc 278  Q
    |||| ||| ||| |||||||||||| |||| |||| |||||||  ||||| ||||||  ||   ||||||||||| ||||| ||| ||| | || |||||    
T  21429279 agctccttccaaagacgtatccgaggaatatcgggttcgatttttagggggaacaacgtttagccagtgcgcatgcctctacgcacgagtcagactagtc 21429378  T
Q  279 gtccaccattggtgggtcggaaaccggtgcgaa 311  Q
    ||||||| |||||||||||||||||||||||||    
T  21429379 gtccacctttggtgggtcggaaaccggtgcgaa 21429411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 237 - 312
Target Start/End: Complemental strand, 6032718 - 6032643
Alignment:
Q  237 cttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 312  Q
    ||||| |||||| |||| ||||| | ||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  6032718 cttgaccagtgctcatgcctctacgaatgagccggattagtcgtctacctttggtgggtcggaaaccggtgcgaaa 6032643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 24166424 - 24166563
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| ||||||||||  || | ||||| ||| |||||| ||| ||||||||||  |||  ||||||||||| ||||| ||| ||||| ||||    
T  24166424 aaggagctccttccaaggacgtactcggggaatactgggttcgattcccaagggaaacaacgtttggccagtgcgcatgcctctacgcacgagccagatt 24166523  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||  ||||| ||| ||| ||||||||||||||||||||    
T  24166524 agtcacccacctttgatggatcggaaaccggtgcgaaagc 24166563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 38168231 - 38168369
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||| ||| | |||||| || |||||| | | | | |||||| ||||  |||||| |||| ||||| ||||||||||||||    
T  38168231 aaggagctccttccaaggacgtacccggggaataccaggttcgattcctaagaggaacaacgcttggccagtgc-catgcctctacgcatgagccggatt 38168329  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||| |||| || |||||| ||||||||||||||||||    
T  38168330 agtcgttcacctttagtgggttggaaaccggtgcgaaagc 38168369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 243 - 314
Target Start/End: Complemental strand, 47682451 - 47682380
Alignment:
Q  243 cagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||| |||||||||| ||| ||||||| ||||||| ||||| ||||||||||||||||||||||||||||    
T  47682451 cagtgcacatgtctctacgcacgagccgggttagtcgcccacctttggtgggtcggaaaccggtgcgaaagc 47682380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 205 - 314
Target Start/End: Original strand, 10541020 - 10541128
Alignment:
Q  205 aataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccg 304  Q
    |||| |||| ||||||||||||||||||||| ||||  ||||| ||||| ||||| ||| ||||| ||||| ||| ||||| ||| ||| ||||||||||    
T  10541020 aatatcgggttcgatttccaggggaaacaacgcttggccagtgtgcatgcctctacgcacgagccagattaatcg-ccacctttgatggatcggaaaccg 10541118  T
Q  305 gtgcgaaagc 314  Q
    ||||||||||    
T  10541119 gtgcgaaagc 10541128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 205 - 301
Target Start/End: Complemental strand, 20532516 - 20532420
Alignment:
Q  205 aataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaa 301  Q
    ||||||| | |||||||||||| | |||||| ||||  ||||||||||| ||||| ||||||||||||| ||||| ||||| ||||||| |||||||    
T  20532516 aataccgagttcgatttccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggataagtcgcccacctttggtggatcggaaa 20532420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 230 - 314
Target Start/End: Complemental strand, 49260747 - 49260663
Alignment:
Q  230 aacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||| ||||  ||||||||||| ||||| ||| ||||||||||||||| ||||| ||||||||||||||| |||||| |||||    
T  49260747 aacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgaccacctttggtgggtcggaaatcggtgcaaaagc 49260663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 242 - 305
Target Start/End: Original strand, 54946290 - 54946353
Alignment:
Q  242 tcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccgg 305  Q
    ||||| |||||| ||||| ||||||||||||||||||| ||| |||||||||||||||||||||    
T  54946290 tcagtccgcatgcctctacgcatgagccggattagtcgcccatcattggtgggtcggaaaccgg 54946353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 313
Target Start/End: Original strand, 31588728 - 31588798
Alignment:
Q  243 cagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    ||||||||||||||||| |||||||||||||||||||  |||  ||||||| |||||||||| ||||||||    
T  31588728 cagtgcgcatgtctctacgcatgagccggattagtcgctcacttttggtggatcggaaaccgatgcgaaag 31588798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 314
Target Start/End: Complemental strand, 48015193 - 48015071
Alignment:
Q  192 gacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggt 291  Q
    |||||| ||||| ||||||||| |||||| |||| || |||||| ||||  ||||||||| | ||||| ||| ||||||||||||| | |||   ||| |    
T  48015193 gacgtacccgaggaataccgggttcgattcccagtgggaacaacgcttggccagtgcgcaagcctctacgcacgagccggattagtagcccaattttgat 48015094  T
Q  292 gggtcggaaaccggtgcgaaagc 314  Q
    || ||||||||||||||||||||    
T  48015093 ggatcggaaaccggtgcgaaagc 48015071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 185 - 314
Target Start/End: Original strand, 6862209 - 6862336
Alignment:
Q  185 tttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccac 284  Q
    ||||||||||||||||| | ||||||||| |||||| || | ||||  || ||||| |||||||||||||||||| |||  || || |||||||   |||    
T  6862209 tttcaaggacgtatccggggaataccgggttcgattccctgtggaat-aatacttggtcagtgcgcatgtctctacgcaa-agtcgaattagtcactcac 6862306  T
Q  285 cattggtgggtcggaaaccggtgcgaaagc 314  Q
    | ||||| ||||||||||||||||||||||    
T  6862307 ctttggttggtcggaaaccggtgcgaaagc 6862336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 205 - 314
Target Start/End: Original strand, 16645122 - 16645231
Alignment:
Q  205 aataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccg 304  Q
    ||||||||| ||||||| ||||   |||||| ||||  ||||| ||||| |||||  |||||| | ||||||||| |||||  |||||||||||||||||    
T  16645122 aataccgggttcgattttcaggaagaacaacgcttggccagtgtgcatgcctctacacatgagtctgattagtcgcccacctgtggtgggtcggaaaccg 16645221  T
Q  305 gtgcgaaagc 314  Q
    ||||||||||    
T  16645222 gtgcgaaagc 16645231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 230 - 314
Target Start/End: Original strand, 17080072 - 17080156
Alignment:
Q  230 aacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||| ||||  ||||||||||| ||||| |||||||||||||||||||  |||| ||| ||| ||| ||||||||||||||||    
T  17080072 aacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcacacctttgatggatcgaaaaccggtgcgaaagc 17080156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 314
Target Start/End: Complemental strand, 36262898 - 36262765
Alignment:
Q  179 agcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtc 278  Q
    |||| ||| |||||||||| |||   ||||||||| |||||| ||||||  |||||| ||||  |||||| |||| ||||| ||| ||| ||||||||||    
T  36262898 agctccttccaaggacgtacccggagaataccgggttcgattcccaggg--aacaacgcttggccagtgcacatgcctctacgcacgagtcggattagtc 36262801  T
Q  279 gtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    | ||||| |||||||||| ||||||  |||||||||    
T  36262800 gcccacctttggtgggtcagaaaccaatgcgaaagc 36262765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 314
Target Start/End: Original strand, 35359758 - 35359849
Alignment:
Q  223 caggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||| ||||||  |||| ||||||||||| ||| | |||| ||  |||||||||| |||| || ||||||||||||||||||||||||||    
T  35359758 cagggggaacaacgtttgaccagtgcgcatgcctcaacgcataagttggattagtcgcccactataggtgggtcggaaaccggtgcgaaagc 35359849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 313
Target Start/End: Complemental strand, 49952283 - 49952144
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| ||||||||||| || ||||||   || | ||||| |||  ||||||||  ||| |||||||||| | ||||| ||||||||||||||    
T  49952283 aaggagctccttccaaggacgtattcgggaaatattaggtttgattttcagaagaaacaacgtttggtcagtgcgcacgcctctacgcatgagccggatt 49952184  T
Q  275 agtcg-tccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    |||||   |||| ||| ||||| |||||||||||||||||    
T  49952183 agtcgcgtcacctttgatgggttggaaaccggtgcgaaag 49952144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 189 - 311
Target Start/End: Complemental strand, 295655 - 295534
Alignment:
Q  189 aaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccatt 288  Q
    ||||||||||||| | |||||| |  |||||| |||| |||| ||||  |||  ||||||||||| ||||| ||| || || ||||||||||||||| ||    
T  295655 aaggacgtatccggggaataccagattcgattcccagaggaa-caacgtttggccagtgcgcatgcctctacgcacgaaccagattagtcgtccaccgtt 295557  T
Q  289 ggtgggtcggaaaccggtgcgaa 311  Q
    |||||||  ||||||||||||||    
T  295556 ggtgggtttgaaaccggtgcgaa 295534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 313
Target Start/End: Original strand, 14567281 - 14567351
Alignment:
Q  243 cagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    ||||||||||| ||||| ||| |||||||||||||||  | || ||||||||||||||| |||||||||||    
T  14567281 cagtgcgcatgcctctacgcacgagccggattagtcgctcgcctttggtgggtcggaaatcggtgcgaaag 14567351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 238 - 312
Target Start/End: Original strand, 14859328 - 14859402
Alignment:
Q  238 ttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 312  Q
    |||| ||||||||||||||||| ||| ||||| |||||||| |||||| ||| || ||||||||| |||||||||    
T  14859328 ttgaccagtgcgcatgtctctacgcacgagccagattagtcatccacctttgatgtgtcggaaactggtgcgaaa 14859402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 313
Target Start/End: Original strand, 43458655 - 43458725
Alignment:
Q  243 cagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    ||||||||||| ||||| | | ||||||||||||||||||||| ||| || ||||||||||| ||||||||    
T  43458655 cagtgcgcatgcctctacggacgagccggattagtcgtccacctttgatgagtcggaaaccgttgcgaaag 43458725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 248 - 314
Target Start/End: Original strand, 50485990 - 50486056
Alignment:
Q  248 cgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||| ||||| ||| ||||||||||||||| |||||||| ||||||||||||||| ||| |||||    
T  50485990 cgcatgcctctacgcacgagccggattagtcgcccaccattagtgggtcggaaaccgatgcaaaagc 50486056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 312
Target Start/End: Original strand, 13073580 - 13073649
Alignment:
Q  243 cagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 312  Q
    ||||||||||  ||||| |||||| || ||||||||||  ||| ||||||||||||||||||||||||||    
T  13073580 cagtgcgcatacctctacgcatgaaccagattagtcgtttacctttggtgggtcggaaaccggtgcgaaa 13073649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 314
Target Start/End: Original strand, 14858746 - 14858823
Alignment:
Q  237 cttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||| ||||||||||||||||| | | ||| | ||||| ||||||||| ||| |||||| |||||||||||||||||    
T  14858746 cttgaccagtgcgcatgtctctacgtacgagtcagattattcgtccacctttgatgggtcagaaaccggtgcgaaagc 14858823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 314
Target Start/End: Original strand, 4736574 - 4736709
Alignment:
Q  178 gagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagt 277  Q
    ||||| |||||||||| ||| ||||| ||||||||| || |||  ||| |||||||||  |||  || || ||||| ||||| | |  ||||| ||||||    
T  4736574 gagctcctttcaaggatgtacccgaggaataccgggttcaattctcagtggaaacaacgtttggccaatgtgcatgcctctacgtacaagccgaattagt 4736673  T
Q  278 cgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    || ||||| ||||||||||||||| ||||||||||||    
T  4736674 cgcccaccgttggtgggtcggaaa-cggtgcgaaagc 4736709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 182 - 314
Target Start/End: Complemental strand, 15732578 - 15732446
Alignment:
Q  182 ttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtc 281  Q
    ||||| ||||||||||||||   ||||||||| ||||||   | ||| |||||||||||  |||||| |||| ||||| ||| | ||  |||||||||      
T  15732578 ttcttccaaggacgtatccggagaataccgggttcgattcatatggggaacaacacttggccagtgcacatgcctctacgcacgggctagattagtcgct 15732479  T
Q  282 caccattggtgggtcggaaaccggtgcgaaagc 314  Q
    || | ||||||| ||||||||||||||||||||    
T  15732478 catctttggtggatcggaaaccggtgcgaaagc 15732446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 175 - 303
Target Start/End: Original strand, 20354611 - 20354739
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    ||||| || ||| |||||||| |  ||| |||||||| | | |||||||||||  |||||| ||||   |||||||||| ||||| ||||||| ||||||    
T  20354611 aaggatctccttccaaggacgaactcgaaaaataccgagtttgatttccagggagaacaacgcttggctagtgcgcatgcctctacgcatgagtcggatt 20354710  T
Q  275 agtcgtccaccattggtgggtcggaaacc 303  Q
    |||||||||| |||| || || |||||||    
T  20354711 agtcgtccactattgatgagttggaaacc 20354739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 313
Target Start/End: Original strand, 27248405 - 27248538
Alignment:
Q  178 gagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagt 277  Q
    ||||| ||| |||||||||||||| | ||||||||| |||| | ||||| | |||||| ||||  ||  ||||||| ||||| ||| ||||| |||||||    
T  27248405 gagctccttccaaggacgtatccggggaataccgggttcgagtcccaggaggaacaacgcttggcca--gcgcatgcctctacgcaggagccagattagt 27248502  T
Q  278 cgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    || ||||| ||||| |||| ||||| |||| |||||    
T  27248503 cgcccacctttggtaggtcagaaactggtgtgaaag 27248538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 304
Target Start/End: Original strand, 46108734 - 46108794
Alignment:
Q  244 agtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccg 304  Q
    |||||||||| ||||| ||||||||| ||||||||||||||  ||| ||||||||||||||    
T  46108734 agtgcgcatgcctctacgcatgagccagattagtcgtccacttttgatgggtcggaaaccg 46108794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 192 - 308
Target Start/End: Complemental strand, 48317395 - 48317279
Alignment:
Q  192 gacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggt 291  Q
    ||||||| ||| |||||| ||  ||||||| |||| | |||||| |||| |||||| | ||| ||||| ||| ||||||||||||||| ||||| ||| |    
T  48317395 gacgtattcgaaaaatactggattcgattttcaggaggaacaacgcttggtcagtgtgtatgcctctacgcacgagccggattagtcgcccaccgttgat 48317296  T
Q  292 gggtcggaaaccggtgc 308  Q
    |||| ||||||| ||||    
T  48317295 gggttggaaaccagtgc 48317279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 279
Target Start/End: Complemental strand, 12703668 - 12703578
Alignment:
Q  189 aaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcg 279  Q
    |||||||||  |||| ||||| | | ||||||||||| || |||||| ||||| ||||| | ||||||||| |||| ||||||||||||||    
T  12703668 aaggacgtactcgaggaatactgagttcgatttccagtgggaacaacgcttgaccagtgtgtatgtctctacgcataagccggattagtcg 12703578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 303
Target Start/End: Complemental strand, 55005440 - 55005317
Alignment:
Q  178 gagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagt 277  Q
    ||||| ||| ||| |||||||| | |||||||||   ||||||  ||||||||||||| ||||| || |||||||| ||||| |||  || |||||||||    
T  55005440 gagctccttccaaagacgtatctgggaaataccgaattcgattcgcaggggaaacaacgcttgaccattgcgcatgcctctacgcacaagtcggattagt 55005341  T
Q  278 cgtccaccattggtgggtcggaaacc 303  Q
    || |||  |||| |||||||||||||    
T  55005340 cgccca--attgatgggtcggaaacc 55005317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 312
Target Start/End: Original strand, 7741899 - 7742036
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| |||||||| |||||| |||| |||| |||| || | |  |||||| |||||| ||||  |||||| |||| ||||| ||| || || ||||    
T  7741899 aaggagctcctttcaagtacgtattcgaggaatatcgggttccaatctcaggggtaacaacgcttggccagtgcacatgcctctacgcacgatccagatt 7741998  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaa 312  Q
    ||||||||| | ||||||  ||| |||| |||||||||    
T  7741999 agtcgtccatctttggtgaatcgaaaactggtgcgaaa 7742036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 308
Target Start/End: Original strand, 13552156 - 13552209
Alignment:
Q  255 ctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgc 308  Q
    ||||| |||||||||||||||||| |||||||||| ||| | ||||||||||||    
T  13552156 ctctacgcatgagccggattagtcatccaccattgatggataggaaaccggtgc 13552209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 261 - 314
Target Start/End: Complemental strand, 27531721 - 27531668
Alignment:
Q  261 gcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||| |||| |||||||||||| |||||||||||||| |||||| ||||||    
T  27531721 gcatgagtcggaatagtcgtccacctttggtgggtcggaagccggtgtgaaagc 27531668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 249 - 314
Target Start/End: Complemental strand, 38841431 - 38841366
Alignment:
Q  249 gcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||| ||||||| ||||||||||||||| | ||||| | ||||||| || |||||||||    
T  38841431 gcatgtctctacgcatgagtcggattagtcgtccatctttggtagttcggaaatcgatgcgaaagc 38841366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 302
Target Start/End: Original strand, 3507244 - 3507371
Alignment:
Q  174 taaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggat 273  Q
    |||| |||| |||||||| | |||||||   |||| |||| |||||| ||| ||||| |||| ||||   ||||||| || |||||  || |||||||||    
T  3507244 taagaagctcctttcaagaatgtatccggagaatatcgggttcgattcccaagggaa-caacgcttggctagtgcgcgtgcctctacacacgagccggat 3507342  T
Q  274 tagtcgtccaccattggtgggtcggaaac 302  Q
    |||||||||||| ||||||| ||||||||    
T  3507343 tagtcgtccacctttggtggatcggaaac 3507371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 3574583 - 3574446
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||| |   | ||||||| | || ||| ||||||  |||||||||||  ||||||||||| ||||| ||| ||| ||||||    
T  3574583 aaggagctccttccaaggacgtacctagggaataccgagttcaattcccagggagaacaacacttggccagtgcgcatgcctctacgcacgagtcggatt 3574484  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||  |||| | |||  |||||||||||||| ||||||    
T  3574483 agtcgctcaccttaggt--gtcggaaaccggtgagaaagc 3574446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 275 - 314
Target Start/End: Original strand, 1461656 - 1461695
Alignment:
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||| |||||||||||||||| |||||||||||||||||    
T  1461656 agtcgcccaccattggtgggtcagaaaccggtgcgaaagc 1461695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 278
Target Start/End: Original strand, 14077968 - 14078023
Alignment:
Q  223 caggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtc 278  Q
    |||| |||||| |||||| |||||||||||||||||| ||| ||| ||||||||||    
T  14077968 caggagaaacatcacttggtcagtgcgcatgtctctacgcacgagtcggattagtc 14078023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 314
Target Start/End: Complemental strand, 14597969 - 14597898
Alignment:
Q  243 cagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||| ||||| ||| || | |||||||||||||||| ||| ||| ||| |||||||||| |||||    
T  14597969 cagtgcgcatgcctctacgcacgaactggattagtcgtccacctttgatggatcgaaaaccggtgcaaaagc 14597898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 314
Target Start/End: Original strand, 21192682 - 21192753
Alignment:
Q  243 cagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||| ||||| ||| ||| ||||||| ||| ||||  |||||| |||| ||||||||||||||||    
T  21192682 cagtgcgcatgcctctacgcacgagtcggattaatcgcccacatttggtgagtcgaaaaccggtgcgaaagc 21192753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 314
Target Start/End: Complemental strand, 25406604 - 25406561
Alignment:
Q  271 gattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||||||| |||| ||| ||||||||||||||||||||||||    
T  25406604 gattagtcgttcacctttgatgggtcggaaaccggtgcgaaagc 25406561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 313
Target Start/End: Original strand, 30317262 - 30317345
Alignment:
Q  230 aacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    |||||| ||||  |||| || ||| ||||| ||| |||||| |||||||| ||||| |||||||||||||||||| || |||||    
T  30317262 aacaacgcttggccagtacgaatgcctctacgcacgagccgaattagtcgcccacctttggtgggtcggaaaccgatgtgaaag 30317345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 306
Target Start/End: Original strand, 37194852 - 37194915
Alignment:
Q  243 cagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggt 306  Q
    |||||| |||| ||||| ||||||||||||||||| | ||  ||||| ||||||||||||||||    
T  37194852 cagtgcacatgcctctacgcatgagccggattagttgcccgtcattgatgggtcggaaaccggt 37194915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 175 - 290
Target Start/End: Complemental strand, 41339532 - 41339417
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||| |||   ||||||||| |||| | ||| ||| |||||| ||||  ||||| | ||| ||||| ||| ||| ||||||    
T  41339532 aaggagctccttccaaggacgtacccggagaataccgggttcgactcccaaggggaacaacgcttggccagtgtgtatgcctctacgcacgagacggatt 41339433  T
Q  275 agtcgtccaccattgg 290  Q
    ||||| ||||||||||    
T  41339432 agtcgcccaccattgg 41339417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 314
Target Start/End: Original strand, 4986236 - 4986306
Alignment:
Q  244 agtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||||| | || |||||| ||| ||||||||||||| ||| ||| |||||| ||||| |||||||||||    
T  4986236 agtgcgcacgcctttatgcacgagacggattagtcgtctacctttgatgggtcagaaactggtgcgaaagc 4986306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 44
Target Start/End: Original strand, 7795150 - 7795180
Alignment:
Q  14 ttgtatcaaatggttgttcaaatatcattgc 44  Q
    |||||||||||||||||||||||||||||||    
T  7795150 ttgtatcaaatggttgttcaaatatcattgc 7795180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 313
Target Start/End: Complemental strand, 15840004 - 15839934
Alignment:
Q  243 cagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    ||||||||||| ||||| ||||||||||||||||||| ||  | ||| | ||| ||||||| |||||||||    
T  15840004 cagtgcgcatgcctctacgcatgagccggattagtcgcccttctttgataggttggaaaccagtgcgaaag 15839934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 283
Target Start/End: Original strand, 28944968 - 28945013
Alignment:
Q  238 ttgatcagtgcgcatgtctctatgcatgagccggattagtcgtcca 283  Q
    |||| |||||| |||||||||| ||||||| |||||||||||||||    
T  28944968 ttgaccagtgcacatgtctctacgcatgagtcggattagtcgtcca 28945013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 302
Target Start/End: Complemental strand, 21055293 - 21055229
Alignment:
Q  238 ttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaac 302  Q
    |||||| |||||||||||||||||||||| | |||||| |||| || | ||||||| ||| ||||    
T  21055293 ttgatccgtgcgcatgtctctatgcatgaactggattaatcgtacatctttggtggatcgaaaac 21055229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 313
Target Start/End: Complemental strand, 24479095 - 24478983
Alignment:
Q  201 gagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaa 300  Q
    ||||||||||| | || ||||  |||||||||||| ||||| || | | || | |||||  || ||||||||||| ||| ||||| ||||||| ||||||    
T  24479095 gagaaataccgagttcaatttttaggggaaacaacgcttgaccattacacacgcctctacacacgagccggattaatcgcccaccgttggtggatcggaa 24478996  T
Q  301 accggtgcgaaag 313  Q
    ||| || ||||||    
T  24478995 accagtacgaaag 24478983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 314
Target Start/End: Original strand, 33176075 - 33176127
Alignment:
Q  262 catgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||| | ||||||||||||||| |||||| || ||||||| ||||||||||    
T  33176075 catgaggcagattagtcgtccacctttggtgagttggaaaccagtgcgaaagc 33176127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 313
Target Start/End: Original strand, 45721154 - 45721198
Alignment:
Q  269 cggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    ||||||||||||||||| ||  ||||| |||||||||||||||||    
T  45721154 cggattagtcgtccacctttaatgggttggaaaccggtgcgaaag 45721198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 6e-40; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 6606234 - 6606095
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||||||| | ||||||||| ||||||  |||||| |||||||||||  |||||  |||| ||||| ||||||||||||||    
T  6606234 aaggagctccttccaaggacgtatccggggaataccgggttcgattctcagggggaacaacacttggccagtgtacatgcctctacgcatgagccggatt 6606135  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  6606134 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 6606095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 5253360 - 5253221
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||| ||| | ||||||||| |||||| ||||||| |||||||||||  ||||||||||| ||||| ||||||||||||||    
T  5253360 aaggagctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggatt 5253261  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    | ||| ||||| ||||||||||||||||||||||||||||    
T  5253260 aatcgcccacctttggtgggtcggaaaccggtgcgaaagc 5253221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 13036141 - 13036002
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| ||||||||||| || | |||| |||| ||||||| |||||| |||||||||||  ||||||||||| ||||| ||||||||| ||||    
T  13036141 aaggagctccttccaaggacgtattcggggaatatcgggttcgattttcagggggaacaacacttggccagtgcgcatgcctctacgcatgagccagatt 13036042  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  13036041 agtcgtccactattggtgggtcggaaaccggtgcgaaagc 13036002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 19089471 - 19089610
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    ||||||||  ||||||||||||||||||| |||||| || | |||| ||||||| |||||||||||  ||||| ||||| ||||| ||| ||||||||||    
T  19089471 aaggagctcatttcaaggacgtatccgaggaataccaggtttgattcccagggggaacaacacttggccagtgagcatgcctctacgcacgagccggatt 19089570  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||| ||| ||||||||||||||||||||||||||||    
T  19089571 agtcgtctacctttggtgggtcggaaaccggtgcgaaagc 19089610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 21898621 - 21898760
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||||||| | ||||||||| |||||| ||||| | |||||| ||||  ||||||||||| ||||| ||||||||||||||    
T  21898621 aaggagctccttccaaggacgtatccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggatt 21898720  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||| |||| || |||||||||||||||||||||||||    
T  21898721 agtcgttcacctttagtgggtcggaaaccggtgcgaaagc 21898760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 14107495 - 14107356
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| ||| ||||||| || | ||||||||| |||||| ||||| | |||||| ||||| |||||| |||| ||||| ||||||||||||||    
T  14107495 aaggagctccttccaaagacgtattcggggaataccgggttcgattcccaggaggaacaacgcttgaccagtgcacatgcctctacgcatgagccggatt 14107396  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||| |||  ||| |||||||||||||||||||||||||    
T  14107395 agtcgcccattattagtgggtcggaaaccggtgcgaaagc 14107356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 188 - 314
Target Start/End: Original strand, 12635800 - 12635926
Alignment:
Q  188 caaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccat 287  Q
    |||||||||||||| | |||||| || | |||| |||||||||||||| ||||   |||||||||| ||||| |||  |||||||||||||| |||| ||    
T  12635800 caaggacgtatccggggaataccaggtttgattcccaggggaaacaacgcttggctagtgcgcatgcctctacgcacaagccggattagtcgcccactat 12635899  T
Q  288 tggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||||||||||||||||||||||||    
T  12635900 tggtgggtcggaaaccggtgcgaaagc 12635926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 8612111 - 8611972
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||| ||| | ||||||||| |||||| | ||| | |||||| ||||| ||||| |||||  |||| |||||| |||||||    
T  8612111 aaggagctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttgaccagtgtgcatgcttctacgcatgaaccggatt 8612012  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||| ||||| |||||||||| |||||||||||||||||    
T  8612011 agtcgcccacctttggtgggtcagaaaccggtgcgaaagc 8611972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 8932634 - 8932773
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||| | ||| |||||| ||||||| | |||| |||| |||||| ||||||| |||||||||||   |||||||||| ||||| ||||||||||||||    
T  8932634 aaggagttccttccaaggatgtatccggggaatatcgggttcgattcccagggggaacaacacttggctagtgcgcatgcctctacgcatgagccggatt 8932733  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    | ||  ||||| ||| ||||||||||||||||||||||||    
T  8932734 aatcacccacctttgatgggtcggaaaccggtgcgaaagc 8932773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 8944100 - 8944239
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||| | ||| |||||| ||||||| | |||| |||| |||||| ||||||| |||||||||||   |||||||||| ||||| ||||||||||||||    
T  8944100 aaggagttccttccaaggatgtatccggggaatatcgggttcgattcccagggggaacaacacttggctagtgcgcatgcctctacgcatgagccggatt 8944199  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    | ||  ||||| ||| ||||||||||||||||||||||||    
T  8944200 aatcacccacctttgatgggtcggaaaccggtgcgaaagc 8944239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 13468906 - 13469045
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||||||| | |||||| || || ||| | ||||| ||||||  ||| ||||||| |||| ||||| ||| ||||| ||||    
T  13468906 aaggagctccttccaaggacgtatccggggaataccaggttcaattcctagggggaacaacgattggtcagtgcacatgcctctacgcacgagccagatt 13469005  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||| ||||||||||||||| ||||||||||||||||||    
T  13469006 agtcgcccaccattggtgggttggaaaccggtgcgaaagc 13469045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 29444902 - 29444763
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| ||| |||||| ||| |  |||||||| |||||||| ||||| |||||| ||||  ||||||||||| ||||| ||||||||||||||    
T  29444902 aaggagctccttccaaagacgtacccgggggataccgggttcgatttctagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggatt 29444803  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||| ||||| | ||||||||||||||||  ||||||||||    
T  29444802 agttgtccatctttggtgggtcggaaactagtgcgaaagc 29444763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 175 - 313
Target Start/End: Original strand, 8938684 - 8938822
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| ||| ||| |||||| | |||||  || |||||| ||||| | |||||||||||| ||||||||| |  |||| |||||||||| |||    
T  8938684 aaggagctccttccaaagacatatccggggaatacttggttcgattcccaggaggaacaacacttgaccagtgcgcaagcatctacgcatgagccgaatt 8938783  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    ||||||||||| ||| |||||||||||||||||||||||    
T  8938784 agtcgtccacctttgatgggtcggaaaccggtgcgaaag 8938822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 244 - 314
Target Start/End: Complemental strand, 14783488 - 14783418
Alignment:
Q  244 agtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14783488 agtgtgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 14783418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 178 - 313
Target Start/End: Complemental strand, 29333272 - 29333138
Alignment:
Q  178 gagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagt 277  Q
    ||||| ||| |||||||||| ||  | ||||||||| |||||||||||||||| ||||  |||  ||||||||||| ||||| |||||||||| || |||    
T  29333272 gagctccttccaaggacgtacccagggaataccgggttcgatttccaggggaa-caacgtttggccagtgcgcatgcctctacgcatgagccgaatcagt 29333174  T
Q  278 cgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    |||||||| ||||| |||||| ||||||||||||||    
T  29333173 cgtccacctttggtaggtcggtaaccggtgcgaaag 29333138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 175 - 313
Target Start/End: Complemental strand, 9179873 - 9179735
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    ||||||||  || |||||||||| ||  | ||||||||| |||||| ||||||| |||||||||||| ||||  ||||  ||||| |||||||| |||||    
T  9179873 aaggagctcattccaaggacgtacccagggaataccgggttcgattcccagggggaacaacacttgaccagtatgcatacctctacgcatgagctggatt 9179774  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    ||||||||||| ||||||| ||||||| |||| ||||||    
T  9179773 agtcgtccacctttggtggatcggaaatcggtccgaaag 9179735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 205 - 314
Target Start/End: Original strand, 3601087 - 3601196
Alignment:
Q  205 aataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccg 304  Q
    ||||||||  ||||||  |||||| |||||| ||||  ||||||||||| || ||  || ||||||||||||||||||||| ||||||||||||||||||    
T  3601087 aataccggtttcgattctcagggggaacaacgcttggccagtgcgcatgcctatacacacgagccggattagtcgtccacctttggtgggtcggaaaccg 3601186  T
Q  305 gtgcgaaagc 314  Q
    ||||||||||    
T  3601187 gtgcgaaagc 3601196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 230 - 314
Target Start/End: Complemental strand, 9633707 - 9633623
Alignment:
Q  230 aacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||| ||||  ||||||||||| ||||| ||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  9633707 aacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaagc 9633623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 314
Target Start/End: Original strand, 12606406 - 12606542
Alignment:
Q  178 gagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagt 277  Q
    ||||| ||| |||| ||||||||| | |||||| |  |||||||||||||| ||||||  |||  ||||||||||| ||||| ||| |||||||||||||    
T  12606406 gagctccttccaagaacgtatccggggaataccagattcgatttccagggggaacaacgtttggccagtgcgcatgcctctacgcacgagccggattagt 12606505  T
Q  278 cgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    || ||||| |||||| |  ||||||||||||||||||    
T  12606506 cgcccacctttggtgagctggaaaccggtgcgaaagc 12606542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 243 - 314
Target Start/End: Complemental strand, 30788922 - 30788851
Alignment:
Q  243 cagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||| ||||| ||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  30788922 cagtgcgcatgcctctaggcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaagc 30788851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 188 - 312
Target Start/End: Original strand, 11142589 - 11142713
Alignment:
Q  188 caaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccat 287  Q
    ||||||| || ||| ||||||||| | ||||||  ||| |||||||||  |||| ||||||||||| ||||| ||||||| | ||||||| ||||| | |    
T  11142589 caaggacatacccgggaaataccgagttcgattcgcagtggaaacaacgtttgaccagtgcgcatgcctctacgcatgagtcagattagttgtccaactt 11142688  T
Q  288 tggtgggtcggaaaccggtgcgaaa 312  Q
    |||||||||||| ||||||||||||    
T  11142689 tggtgggtcggagaccggtgcgaaa 11142713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 10311606 - 10311467
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||| ||||||||| | ||||||||| |||||   || ||| |||||| ||||  ||||||||||||||||| ||| |||   ||||    
T  10311606 aaggagctccttccaagaacgtatccggggaataccgggttcgatcctcaaggggaacaacgcttggccagtgcgcatgtctctacgcacgagttagatt 10311507  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||  |||||||||||||||| |||| |||||||||||    
T  10311506 agtcgctcaccattggtgggtcgaaaactggtgcgaaagc 10311467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 175 - 308
Target Start/End: Complemental strand, 2271438 - 2271307
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| ||||||||||| || | ||||||||| ||||||  ||| |  |||||| |||   ||||||||||||||||| ||| ||||||||||    
T  2271438 aaggagctccttccaaggacgtattcggggaataccgggttcgattctcagag--aacaacgcttagccagtgcgcatgtctctacgcacgagccggatt 2271341  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgc 308  Q
    ||||||||||| ||| |||||| |||||| ||||    
T  2271340 agtcgtccacctttgatgggtcagaaaccagtgc 2271307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 175 - 313
Target Start/End: Complemental strand, 24672003 - 24671865
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| |||||||||||||||| |   ||||||||| || ||| |||| || |||||||||||| ||||| ||||| ||||| |||  |||||||||    
T  24672003 aaggagctcctttcaaggacgtatctggagaataccgggttctattcccagagggaacaacacttgaccagtgtgcatgcctctacgcacaagccggatt 24671904  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    ||| |||| || ||| ||| ||||||| ||||| |||||    
T  24671903 agtagtccgcctttgatggttcggaaatcggtgtgaaag 24671865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 259 - 314
Target Start/End: Complemental strand, 13584499 - 13584444
Alignment:
Q  259 atgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||    
T  13584499 atgcatgagccggattaatcgtccacctttggtgggtcggaaaccggcgcgaaagc 13584444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 34954756 - 34954617
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||| | | | |||||| || ||||||  |||||| ||||||  |||  |||||| |||  ||||| ||||||||| ||||    
T  34954756 aaggagctccttccaaggacgtacctggggaataccaggttcgattctcagggggaacaacgtttggccagtgcacatacctctacgcatgagccagatt 34954657  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||| ||| |||||||||||||  |||||||||    
T  34954656 agtcgtccacctttgatgggtcggaaaccaatgcgaaagc 34954617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 244 - 314
Target Start/End: Original strand, 31129219 - 31129289
Alignment:
Q  244 agtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||||||| ||||| ||||||||| ||||||| || |||| |||||| |||||||||||||||||||||    
T  31129219 agtgcgcatgcctctacgcatgagccagattagttgtgcacctttggtgagtcggaaaccggtgcgaaagc 31129289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 230 - 314
Target Start/End: Original strand, 30410473 - 30410557
Alignment:
Q  230 aacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||||||| | ||||||||||| ||||| |||||||| |||||| |||  || | |||||||||||||||||| |||||||||    
T  30410473 aacaacacttaaccagtgcgcatgcctctacgcatgagctggattaatcgctcatctttggtgggtcggaaaccgatgcgaaagc 30410557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 3588082 - 3587943
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||| || || ||| ||||||||||   ||||||||| |||||| ||| ||| |||||| ||||  |||||| |||  ||||| |||||| |||||||    
T  3588082 aaggagtttattccaaagacgtatccggagaataccgggttcgattcccaaggggaacaacgcttggccagtgcacatacctctacgcatgaaccggatt 3587983  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||| ||| ||| ||| |||||||| | |||||||||    
T  3587982 agtcgtcaacctttgatggatcggaaactgatgcgaaagc 3587943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 250 - 312
Target Start/End: Complemental strand, 8149859 - 8149797
Alignment:
Q  250 catgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 312  Q
    |||| ||||| |||| ||||| |||||||||||||| ||||||||| ||||||||||||||||    
T  8149859 catgcctctacgcattagccgaattagtcgtccacctttggtgggttggaaaccggtgcgaaa 8149797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 230 - 312
Target Start/End: Complemental strand, 32157249 - 32157167
Alignment:
Q  230 aacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 312  Q
    |||||||||||| ||||||||||  ||||| ||||||||| |||||||| |||| | ||||||| || |||||||||| ||||    
T  32157249 aacaacacttgaccagtgcgcatacctctacgcatgagccagattagtcatccatctttggtggatcagaaaccggtgtgaaa 32157167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 311
Target Start/End: Original strand, 4596181 - 4596230
Alignment:
Q  262 catgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaa 311  Q
    ||||||||||||||||||||||||||| |||||| ||||||| |||||||    
T  4596181 catgagccggattagtcgtccaccattagtgggttggaaaccagtgcgaa 4596230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 314
Target Start/End: Original strand, 5029816 - 5029929
Alignment:
Q  201 gagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaa 300  Q
    |||||| | |||| ||||||  |||||  ||||||  ||| |||||||||||| ||||| |||||||  |||||||||| ||| | ||| ||||||||||    
T  5029816 gagaaacatcgggttcgattctcagggagaacaacgtttggtcagtgcgcatgcctctacgcatgagttggattagtcgcccatctttgatgggtcggaa 5029915  T
Q  301 accggtgcgaaagc 314  Q
    || |||||||||||    
T  5029916 actggtgcgaaagc 5029929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 280
Target Start/End: Original strand, 9147274 - 9147379
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    ||||||||  || |||||||||| | | | |||| |||| |||||| ||||||| ||| |||||||| |||||| |||| ||||| |||| |||||||||    
T  9147274 aaggagctcattccaaggacgtacctggggaatatcgggttcgattcccagggggaacgacacttgaccagtgcacatgcctctacgcataagccggatt 9147373  T
Q  275 agtcgt 280  Q
    ||||||    
T  9147374 agtcgt 9147379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 314
Target Start/End: Original strand, 21167434 - 21167487
Alignment:
Q  261 gcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||||||| ||||||||||||| ||||| | ||||||||||||||||    
T  21167434 gcatgagccggattaatcgtccaccattgatgggttgaaaaccggtgcgaaagc 21167487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 313
Target Start/End: Original strand, 10396514 - 10396584
Alignment:
Q  243 cagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    |||||||||| |||||||||||||| ||||||||||  |||  |||| | |||||||||||||| ||||||    
T  10396514 cagtgcgcatatctctatgcatgagtcggattagtcacccattattgataggtcggaaaccggtacgaaag 10396584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 305
Target Start/End: Original strand, 33939984 - 33940114
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| |||  ||||||||||||||| ||||| ||| | ||||  |||| | ||||| |||| | || |||||||| |||||  || ||||||||||    
T  33939984 aaggagctacttctaaggacgtatccgaggaatactgggtttgattctcaggaggaacaatacttaaccattgcgcatgcctctacacacgagccggatt 33940083  T
Q  275 agtcgtccaccattggtgggtcggaaaccgg 305  Q
    ||||||||| | |||  |||||| |||||||    
T  33940084 agtcgtccatctttgacgggtcgaaaaccgg 33940114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 314
Target Start/End: Original strand, 14326045 - 14326109
Alignment:
Q  250 catgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||| ||||| |||||||||||||||||||  || | ||||||||||||||| |||||| |||||    
T  14326045 catgcctctacgcatgagccggattagtcgctcatctttggtgggtcggaaaacggtgcaaaagc 14326109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 314
Target Start/End: Original strand, 14419055 - 14419119
Alignment:
Q  250 catgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||| ||||| |||||||||||||||||||  || | ||||||||||||||| |||||| |||||    
T  14419055 catgcctctacgcatgagccggattagtcgctcatctttggtgggtcggaaaacggtgcaaaagc 14419119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 295
Target Start/End: Complemental strand, 19230694 - 19230576
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| ||||||||||  || ||| ||||||  ||||||| || ||||| |||| |||| |||||  ||||| ||||| ||| ||||||||||    
T  19230694 aaggagctccttccaaggacgtactcgggaa-taccggattcgattttcaagggaa-caacgcttggtcagtatgcatgcctctacgcacgagccggatt 19230597  T
Q  275 agtcgtccaccattggtgggt 295  Q
    |||||| || |||||||||||    
T  19230596 agtcgttcatcattggtgggt 19230576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 240
Target Start/End: Complemental strand, 2105213 - 2105162
Alignment:
Q  189 aaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttg 240  Q
    ||||||||| ||| ||||||||||| |||||||| |||||||||||| ||||    
T  2105213 aaggacgtacccgggaaataccgggttcgatttctaggggaaacaacgcttg 2105162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 280
Target Start/End: Original strand, 5333032 - 5333082
Alignment:
Q  230 aacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgt 280  Q
    |||||||||||  |||||||||||||||||  |||||||| ||||||||||    
T  5333032 aacaacacttgtccagtgcgcatgtctctacacatgagccagattagtcgt 5333082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 44
Target Start/End: Original strand, 12187092 - 12187126
Alignment:
Q  10 aatattgtatcaaatggttgttcaaatatcattgc 44  Q
    ||||||||||||||||||||||||||||| |||||    
T  12187092 aatattgtatcaaatggttgttcaaatattattgc 12187126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 308
Target Start/End: Complemental strand, 17114959 - 17114901
Alignment:
Q  250 catgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgc 308  Q
    |||| ||||| ||||||||||||||||||| ||||| ||| | ||||||||| ||||||    
T  17114959 catgcctctacgcatgagccggattagtcgcccacctttgataggtcggaaatcggtgc 17114901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 279
Target Start/End: Original strand, 1928392 - 1928437
Alignment:
Q  234 acacttgatcagtgcgcatgtctctatgcatgagccggattagtcg 279  Q
    ||||||||||||||  |||| || ||||||||||||||||||||||    
T  1928392 acacttgatcagtgtacatgcctttatgcatgagccggattagtcg 1928437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 303
Target Start/End: Original strand, 8888906 - 8888983
Alignment:
Q  226 gggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaacc 303  Q
    ||||||||||  |||  ||||||||||  ||||| ||||||| ||||||||||||||||| ||| ||| ||| |||||    
T  8888906 gggaaacaacgtttggccagtgcgcatacctctacgcatgagtcggattagtcgtccacctttgatggatcgaaaacc 8888983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 21872971 - 21873015
Alignment:
Q  270 ggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||||||||||||| ||| ||||||||||||| |||| |||||    
T  21872971 ggattagtcgtccacctttgatgggtcggaaaccagtgcaaaagc 21873015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 3e-39; HSPs: 80)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 175 - 313
Target Start/End: Original strand, 12864193 - 12864331
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| ||| ||||||| || | ||||||||  |||||||||||||| ||||||||||| |||||||||||| ||||  ||||||||| ||||    
T  12864193 aaggagctccttccaatgacgtattcggggaataccggattcgatttccagggggaacaacacttggtcagtgcgcatgcctctgcgcatgagccagatt 12864292  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    |||||||||||||||||||||||||||||||||||||||    
T  12864293 agtcgtccaccattggtgggtcggaaaccggtgcgaaag 12864331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 188 - 313
Target Start/End: Complemental strand, 14169733 - 14169608
Alignment:
Q  188 caaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccat 287  Q
    ||||||||||| || | |||| |||| ||||||  | |||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||    
T  14169733 caaggacgtattcggggaatatcgggttcgattctccgggggaacaacacttgaccagtgcgcatgtctctacgcatgagccggattagtcgtctaccat 14169634  T
Q  288 tggtgggtcggaaaccggtgcgaaag 313  Q
    ||||||||||||||||||||||||||    
T  14169633 tggtgggtcggaaaccggtgcgaaag 14169608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 189 - 313
Target Start/End: Complemental strand, 6358274 - 6358150
Alignment:
Q  189 aaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccatt 288  Q
    ||||||||||||| | |||||| |  |||||||||||||| |||||||||||  ||||||||||| ||||| ||||||||||||||||||||||||||||    
T  6358274 aaggacgtatccggggaataccagattcgatttccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccaccatt 6358175  T
Q  289 ggtgggtcggaaaccggtgcgaaag 313  Q
    ||||||||| ||||||||| |||||    
T  6358174 ggtgggtcgaaaaccggtgtgaaag 6358150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 175 - 311
Target Start/End: Original strand, 34356175 - 34356311
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    ||||||||  || |||||||||||| | | ||||||||| |||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||    
T  34356175 aaggagctatttccaaggacgtatctggggaataccgggttcgatttccagggggaacaacacttggtcagtgcgcatgcctctatgcatgagccggatt 34356274  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaa 311  Q
    | |||| |||||||| ||||||||||||  |||||||    
T  34356275 aatcgtgcaccattgatgggtcggaaacgagtgcgaa 34356311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 174 - 313
Target Start/End: Original strand, 38962731 - 38962870
Alignment:
Q  174 taaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggat 273  Q
    |||||||||  ||||||||||||||||| | ||||||||| ||||||| |||| | |||||| ||||  ||||||||||| ||||| |||||| ||||||    
T  38962731 taaggagctcatttcaaggacgtatccggggaataccgggttcgattttcaggaggaacaacgcttggccagtgcgcatgcctctacgcatgaaccggat 38962830  T
Q  274 tagtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    |||||||||||| |||||||||| ||||| ||||||||||    
T  38962831 tagtcgtccacctttggtgggtcagaaactggtgcgaaag 38962870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 205 - 314
Target Start/End: Original strand, 12455309 - 12455418
Alignment:
Q  205 aataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccg 304  Q
    ||||||||| ||||||||||||||||||||| |||   ||||||||||| ||||| ||| |||||||||||||||  |||||||||||||||||||||||    
T  12455309 aataccgggttcgatttccaggggaaacaacgcttagccagtgcgcatgcctctacgcacgagccggattagtcgctcaccattggtgggtcggaaaccg 12455408  T
Q  305 gtgcgaaagc 314  Q
    ||||||||||    
T  12455409 gtgcgaaagc 12455418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 215 - 314
Target Start/End: Original strand, 16325604 - 16325703
Alignment:
Q  215 tcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||| ||||||| |||||||||||  ||||| ||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  16325604 tcgattcccagggggaacaacacttggccagtgtgcatgcctctacgcatgagccagattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 16325703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 18902667 - 18902528
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| ||||||||||  || | ||||||||| |||||| ||| ||| |||||| ||||| |||||||| |||||||| ||| ||||| ||||    
T  18902667 aaggagctccttccaaggacgtactcggggaataccgggttcgattcccacggggaacaacgcttgaccagtgcgcgtgtctctacgcacgagccagatt 18902568  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||| ||||| ||||||||||||||||||||||||||||    
T  18902567 agtcgcccacctttggtgggtcggaaaccggtgcgaaagc 18902528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 175 - 312
Target Start/End: Complemental strand, 20612673 - 20612534
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccagg-ggaaacaacacttgatcagtgcgcatgtctctatgcatgagccgg-a 272  Q
    |||||||| ||| |||||  |||| || | ||||||||| ||||||  |||| || |||||||||||  ||||||||||| ||||||||||||||||| |    
T  20612673 aaggagctccttccaaggttgtattcggggaataccgggttcgattctcaggagggaacaacacttggccagtgcgcatgcctctatgcatgagccggga 20612574  T
Q  273 ttagtcgtccaccattggtgggtcggaaaccggtgcgaaa 312  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  20612573 ttagtcgtccaccattggtgggtcggaaaccggtgcgaaa 20612534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 25540541 - 25540402
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    ||||||||  || |||||||||||| | | ||||| ||| |||||| | ||||| |||||| ||||  ||||||||||| ||||| ||| ||||||||||    
T  25540541 aaggagctcattccaaggacgtatctggggaatactgggttcgattcctagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggatt 25540442  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  25540441 agtcgtccacctttggtgggtcggaaaccggtgcgaaagc 25540402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 41220604 - 41220743
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||| ||| | ||||||||| |||||| ||||| | |||||| ||||  ||||||||||| ||||| |||||||||| |||    
T  41220604 aaggagctccttccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccgaatt 41220703  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||| |||| || |||||||||||||||||||||||||    
T  41220704 agtcgttcacctttagtgggtcggaaaccggtgcgaaagc 41220743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 175 - 313
Target Start/End: Original strand, 2550837 - 2550975
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||||||| | |||| |||| |||||| ||||| | ||||||||||   ||||||||||||||||| ||||||||||||||    
T  2550837 aaggagctccttacaaggacgtatccggggaatatcgggttcgattcccaggaggaacaacacttagccagtgcgcatgtctctacgcatgagccggatt 2550936  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    ||||| ||||  ||||||||| | |||||||||||||||    
T  2550937 agtcgcccacttttggtgggttgaaaaccggtgcgaaag 2550975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 178 - 312
Target Start/End: Original strand, 2784905 - 2785038
Alignment:
Q  178 gagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagt 277  Q
    ||||| |||||||||||||||||||| ||||||| | ||||||| ||||| |||||| | ||| |||||||||||| ||||| ||||||| | |||||||    
T  2784905 gagctcctttcaaggacgtatccgaggaataccgagttcgattttcaggg-aaacaagatttggtcagtgcgcatgcctctacgcatgagtcagattagt 2785003  T
Q  278 cgtccaccattggtgggtcggaaaccggtgcgaaa 312  Q
    |||||| ||||| || |||||||||||||||||||    
T  2785004 cgtccatcattgatgagtcggaaaccggtgcgaaa 2785038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 174 - 314
Target Start/End: Original strand, 10823028 - 10823168
Alignment:
Q  174 taaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggat 273  Q
    ||||||||| ||| |||||||||| ||| | ||||||||| | |||| ||||| | |||||| ||||  ||||||||||| ||||| ||| |||||||||    
T  10823028 taaggagctccttccaaggacgtacccggggaataccgggtttgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcacgagccggat 10823127  T
Q  274 tagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||| ||||| || |||||||||||||||||||||||||    
T  10823128 tagtcgcccaccttttgtgggtcggaaaccggtgcgaaagc 10823168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 7747243 - 7747382
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||||||| | ||||||||| |||||| | ||| | ||||||  |||  ||||| ||||| ||||| ||||||||||||||    
T  7747243 aaggagctccttccaaggacgtatccggggaataccgggttcgattcctaggaggaacaacgtttggccagtgtgcatgcctctacgcatgagccggatt 7747342  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||| |||| || |||||||||||||||||||||||||    
T  7747343 agtcgttcacctttagtgggtcggaaaccggtgcgaaagc 7747382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 8410100 - 8410239
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||| |||   |||| |||| |||||| ||||||| |||||||||||  ||||||||||| ||||| ||| ||||||||||    
T  8410100 aaggagctccttccaaggacgtacccggagaatatcgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcacgagccggatt 8410199  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||| ||||  |||| |||||||||||||||||||||||    
T  8410200 agtcgcccacttttggggggtcggaaaccggtgcgaaagc 8410239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 175 - 313
Target Start/End: Original strand, 21286413 - 21286551
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||||||| | ||||||||| |||||| ||||| |||||||| ||||| ||||||||||| ||||| ||| |||| |||||    
T  21286413 aaggagctccttccaaggacgtatccggggaataccgggttcgattcccaggcgaaacaacgcttgaccagtgcgcatgcctctacgcacgagctggatt 21286512  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    ||||   || ||||||||||| |||||||||||| ||||    
T  21286513 agtcactcatcattggtgggttggaaaccggtgcaaaag 21286551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 205 - 314
Target Start/End: Original strand, 44139483 - 44139592
Alignment:
Q  205 aataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccg 304  Q
    ||||||||| |||||| ||||||| |||||| ||||  |||||||| || ||||| ||| ||||||||||||||| |||||| |||||||||||||||||    
T  44139483 aataccgggttcgattcccagggggaacaacgcttggccagtgcgcgtgcctctacgcacgagccggattagtcgcccaccaatggtgggtcggaaaccg 44139582  T
Q  305 gtgcgaaagc 314  Q
    ||||||||||    
T  44139583 gtgcgaaagc 44139592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 178 - 314
Target Start/End: Complemental strand, 42770785 - 42770649
Alignment:
Q  178 gagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagt 277  Q
    ||||| ||| |||||||||||||||||||||||||| || |||  |||||| |||||| ||||  ||||||||||| ||||  ||| ||||||||||| |    
T  42770785 gagctccttccaaggacgtatccgagaaataccgggttcaattctcagggggaacaacgcttggccagtgcgcatgcctcttcgcacgagccggattaat 42770686  T
Q  278 cgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||||| ||||||||||| |||||| ||| |||||    
T  42770685 cgtccacctttggtgggtcgaaaaccgatgcaaaagc 42770649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 188 - 303
Target Start/End: Original strand, 331483 - 331598
Alignment:
Q  188 caaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccat 287  Q
    |||||||||| ||| | ||||||||| |||||| ||||||| |||||||||||  |||||||||||  |||| ||||||||||||||||||| ||||| |    
T  331483 caaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcttctacgcatgagccggattagtcgcccacctt 331582  T
Q  288 tggtgggtcggaaacc 303  Q
    |||||||| |||||||    
T  331583 tggtgggttggaaacc 331598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 3644024 - 3643885
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    ||||||||  || |||||||||||||| | ||||||||| | |||||| | | | |||||| ||||  ||||||||||| ||||| |||||||| |||||    
T  3644024 aaggagctcattccaaggacgtatccggggaataccgggtttgatttctacgaggaacaacgcttggccagtgcgcatgcctctacgcatgagctggatt 3643925  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||| |||||||| ||||||||| |||||||||    
T  3643924 agtcgtccacctttggtgggccggaaaccgttgcgaaagc 3643885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 3811828 - 3811689
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    ||||| || ||| ||||||||||  |||| |||| |||| |||||| |||| || ||||||||||| ||| |||||||| ||||| ||||||||||||||    
T  3811828 aaggaactccttccaaggacgtactcgaggaatatcgggttcgattcccagagggaacaacacttggtcaatgcgcatgcctctacgcatgagccggatt 3811729  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    | ||| ||||| |||||||||| ||||||| |||||||||    
T  3811728 actcgcccacctttggtgggtcagaaaccgatgcgaaagc 3811689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 174 - 313
Target Start/End: Original strand, 16034905 - 16035044
Alignment:
Q  174 taaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggat 273  Q
    |||||| || ||| |||||||||||||||| ||||||||| ||||||| |||| | |||||| ||||| ||||| ||||| || || | | |||||||||    
T  16034905 taaggaactccttccaaggacgtatccgaggaataccgggttcgattttcaggcggaacaacgcttgaccagtgtgcatgcctatacgtacgagccggat 16035004  T
Q  274 tagtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    ||||||  |||||||| || ||||||||||||||||||||    
T  16035005 tagtcgctcaccattgatgagtcggaaaccggtgcgaaag 16035044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 22593104 - 22593241
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||| ||| | ||||| | | |||||| ||||||| ||||||  |||  ||||||||||| ||||| ||||||||||||||    
T  22593104 aaggagctccttccaaggacgtacccggggaatactgagttcgattcccagggggaacaacg-ttggccagtgcgcatgcctctacgcatgagccggatt 22593202  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||| |||||||||||| |||||||||||||||    
T  22593203 agtcgtccacctttggtgggtcgg-aaccggtgcgaaagc 22593241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 38005371 - 38005510
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||| ||| | ||||| ||| |||||| ||| ||| |||||| ||||  ||||||||||| |||||  |||||||||||||    
T  38005371 aaggagctccttccaaggacgtacccggggaatactgggttcgattcccaaggggaacaacgcttggccagtgcgcatgcctctacacatgagccggatt 38005470  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||| ||||| ||||||| |||||||| |||||||||||    
T  38005471 agtcgcccacctttggtggatcggaaactggtgcgaaagc 38005510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 189 - 313
Target Start/End: Original strand, 35946722 - 35946845
Alignment:
Q  189 aaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccatt 288  Q
    ||||||||||||| | ||||||| | |||||| | ||||||| |||| ||||  || || ||||| ||||| ||| ||||||||||||||||||||||||    
T  35946722 aaggacgtatccggggaataccgagttcgattcctaggggaa-caacgcttggccattgtgcatgcctctacgcacgagccggattagtcgtccaccatt 35946820  T
Q  289 ggtgggtcggaaaccggtgcgaaag 313  Q
    |||||||||||||| ||||||||||    
T  35946821 ggtgggtcggaaactggtgcgaaag 35946845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 175 - 302
Target Start/End: Complemental strand, 10026753 - 10026626
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| ||||||||||  ||  |||||||||| ||||||  |||||| ||||||  |||  ||||||||||| ||||| ||||||||||||||    
T  10026753 aaggagctccttccaaggacgtactcggaaaataccgggttcgattctcagggggaacaacgtttggccagtgcgcatgcctctacgcatgagccggatt 10026654  T
Q  275 agtcgtccaccattggtgggtcggaaac 302  Q
    ||||| ||||| ||||||||||||||||    
T  10026653 agtcgaccacctttggtgggtcggaaac 10026626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 175 - 302
Target Start/End: Complemental strand, 10046613 - 10046487
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||| |||||||||   ||||||||| ||||||  || ||||||||||  |||| ||||||||||| ||||| ||||||||||||||    
T  10046613 aaggagctccttccaagaacgtatccggagaataccgggttcgattctcaagggaaacaacgtttga-cagtgcgcatgcctctacgcatgagccggatt 10046515  T
Q  275 agtcgtccaccattggtgggtcggaaac 302  Q
    ||||| ||||| ||||||||||||||||    
T  10046514 agtcgaccacctttggtgggtcggaaac 10046487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 29422184 - 29422323
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| |||||||||||||| ||| | ||||| ||| ||||||||||| || |||||||||||  || || ||||  || || ||| ||||||||||    
T  29422184 aaggagctcctttcaaggacgtacccggggaatactgggttcgatttccagagggaacaacacttggccaatgagcatacctttacgcacgagccggatt 29422283  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||| ||| ||| ||||||| ||||||||||||    
T  29422284 agtcgtccacctttgatggatcggaaatcggtgcgaaagc 29422323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 154 - 314
Target Start/End: Original strand, 37560115 - 37560281
Alignment:
Q  154 caatcaagttgtttgggctc------taaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtg 247  Q
    ||||||||||||||||||||      |||| |||| ||| |||||||||| ||||| |||||| || ||||||  || ||| ||||||  ||| ||||||    
T  37560115 caatcaagttgtttgggctccagtggtaagaagctccttccaaggacgtacccgaggaataccaggttcgattctcaaggggaacaacgtttggtcagtg 37560214  T
Q  248 cgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||| ||||| ||| ||||||||||| ||||||||| ||| ||||||| ||||||||| ||||||    
T  37560215 cgcatgcctctacgcacgagccggattaatcgtccacctttgatgggtcgaaaaccggtgtgaaagc 37560281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 41032042 - 41031904
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||| | | |||  |||||| |||||| ||||||| |||||||||||  ||||| ||||| ||||| ||| ||||||||||    
T  41032042 aaggagctccttccaaggacgtaccagggaac-accgggttcgattcccagggggaacaacacttggccagtgtgcatgcctctacgcacgagccggatt 41031944  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||  ||||| ||||||||||||||||| ||||||||||    
T  41031943 agtcacccacctttggtgggtcggaaaccagtgcgaaagc 41031904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 175 - 308
Target Start/End: Original strand, 7787025 - 7787158
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    ||||| || ||||| |||||||| ||| | ||||||||| |||||||||||||| ||||| |||||  |||| |||||| ||||| ||| ||||||||||    
T  7787025 aaggaactcctttctaggacgtacccggggaataccgggttcgatttccagggggaacaatacttggccagtacgcatgcctctacgcacgagccggatt 7787124  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgc 308  Q
    ||||| ||| | ||||||| ||| ||||||||||    
T  7787125 agtcgcccatctttggtggatcgaaaaccggtgc 7787158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 28616516 - 28616377
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    ||||| || ||| ||||||| |||||| | |||| |||| ||||||| |||||| || ||||||||  ||||||||||| ||||| ||| ||||| ||||    
T  28616516 aaggaactccttccaaggacatatccgcggaatatcgggttcgattttcagggggaataacacttgggcagtgcgcatgcctctacgcacgagccagatt 28616417  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||| ||| | || ||||||| |||||||||||||||||    
T  28616416 agtcgcccatctttagtgggtcagaaaccggtgcgaaagc 28616377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 188 - 313
Target Start/End: Complemental strand, 19976931 - 19976806
Alignment:
Q  188 caaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccat 287  Q
    |||||||||||||| | ||||||||| ||||||| |||||| || |||  ||| |||||||||||||||||| |||| || || |||||||| ||||| |    
T  19976931 caaggacgtatccggggaataccgggttcgattttcagggggaataacgtttggtcagtgcgcatgtctctacgcataagtcgaattagtcgcccacctt 19976832  T
Q  288 tggtgggtcggaaaccggtgcgaaag 313  Q
    || ||  ||||||| |||||||||||    
T  19976831 tgatgaatcggaaatcggtgcgaaag 19976806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 246 - 314
Target Start/End: Complemental strand, 20116678 - 20116610
Alignment:
Q  246 tgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||||| ||||| |||||||||||||||| |||||||| ||| ||||||||||||||||||||||||    
T  20116678 tgcgcatgcctctacgcatgagccggattagccgtccacctttgatgggtcggaaaccggtgcgaaagc 20116610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 215 - 314
Target Start/End: Complemental strand, 28525553 - 28525453
Alignment:
Q  215 tcgatttccagggg-aaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    |||||||||||||| ||||||||||||  ||||||||||| ||||| ||| |||||||||||||| |||||| ||  |||||||||||| |||| |||||    
T  28525553 tcgatttccagggggaaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcatccacctttaatgggtcggaaactggtgtgaaag 28525454  T
Q  314 c 314  Q
    |    
T  28525453 c 28525453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 175 - 307
Target Start/End: Complemental strand, 39201645 - 39201513
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| ||||||||||  |||| |||||||   ||||||  |||||| |||||   |||  ||||| ||||| ||||| ||||||||||||||    
T  39201645 aaggagctccttccaaggacgtactcgaggaataccgaattcgattctcagggggaacaatgtttggccagtgtgcatgcctctacgcatgagccggatt 39201546  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtg 307  Q
    |||||| |||| |||||||||||||||||||||    
T  39201545 agtcgttcacctttggtgggtcggaaaccggtg 39201513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 188 - 314
Target Start/End: Original strand, 11069860 - 11069986
Alignment:
Q  188 caaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccat 287  Q
    |||||||||| ||| | |||||| || |||||| | ||||| ||||||  |||  ||||||||||  ||||| ||| |||| | |||||||||||||| |    
T  11069860 caaggacgtacccggggaataccaggttcgattccgagggggaacaacgtttggccagtgcgcatacctctacgcacgagctgaattagtcgtccaccgt 11069959  T
Q  288 tggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||||||||| |||||||||    
T  11069960 tggtgggtcggaaaccgatgcgaaagc 11069986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 188 - 313
Target Start/End: Complemental strand, 9360872 - 9360747
Alignment:
Q  188 caaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccat 287  Q
    |||||||||| ||| | |||||| || |||||| | || |||||||||  |||  ||||||||||| ||||| ||| |||||| |||||||| ||||| |    
T  9360872 caaggacgtacccggggaataccaggttcgattactagaggaaacaacgtttggccagtgcgcatgcctctacgcacgagccgaattagtcgcccacctt 9360773  T
Q  288 tggtgggtcggaaaccggtgcgaaag 313  Q
    | ||||| ||||||||||||||||||    
T  9360772 tagtgggccggaaaccggtgcgaaag 9360747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 207 - 308
Target Start/End: Original strand, 10669593 - 10669694
Alignment:
Q  207 taccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggt 306  Q
    ||||||| | |||| ||||||  |||||| ||||  ||||||||||||||||| ||| ||| ||||||| |||| |||| ||||||||||||||||||||    
T  10669593 taccgggtttgattcccagggagaacaacgcttggccagtgcgcatgtctctacgcacgagtcggattaatcgttcacctttggtgggtcggaaaccggt 10669692  T
Q  307 gc 308  Q
    ||    
T  10669693 gc 10669694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 314
Target Start/End: Original strand, 29653602 - 29653730
Alignment:
Q  181 cttctttcaaggacgta-tccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcg 279  Q
    |||||| |||||||||| |||| ||||||||||  ||||||||||||| ||||||| ||||  ||||||||||| ||||| ||| |||||| ||||||||    
T  29653602 cttcttccaaggacgtactccg-gaaataccggattcgatttccagggaaaacaacgcttgggcagtgcgcatgcctctacgcacgagccgaattagtcg 29653700  T
Q  280 tccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
     ||||| ||||||    ||||||||||||||||||    
T  29653701 -ccacctttggtg----ggaaaccggtgcgaaagc 29653730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 314
Target Start/End: Complemental strand, 2528475 - 2528339
Alignment:
Q  178 gagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagt 277  Q
    ||||| ||| ||||||||||  |||| || |||||| |||||| ||||||| |||||| |||| |||||| ||||| |||||  ||| ||||||||||||    
T  2528475 gagctccttccaaggacgtactcgaggaacaccgggttcgattcccagggggaacaacgcttggtcagtgtgcatgcctctacacataagccggattagt 2528376  T
Q  278 cgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||  || | || ||| ||||||||| |||||||||||    
T  2528375 cgctcatctttagtgagtcggaaactggtgcgaaagc 2528339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 313
Target Start/End: Complemental strand, 3849041 - 3848913
Alignment:
Q  185 tttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccac 284  Q
    ||||||||||||||| |   ||||||||| ||||||  |||||||||||||  |||  ||| ||||||||||||| ||| ||| |||||||||||| |||    
T  3849041 tttcaaggacgtatctggagaataccgggttcgattatcaggggaaacaacgtttggccagggcgcatgtctctacgcacgagtcggattagtcgttcac 3848942  T
Q  285 cattggtgggtcggaaaccggtgcgaaag 313  Q
    | ||| ||||||| |||  ||||||||||    
T  3848941 ctttgatgggtcgaaaattggtgcgaaag 3848913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 230 - 314
Target Start/End: Original strand, 34722704 - 34722788
Alignment:
Q  230 aacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||| |||| ||||||| |||||||||| ||| ||||||||||||||| ||||| ||| ||| || |||||||||||||||||    
T  34722704 aacaacgcttggtcagtgcacatgtctctacgcacgagccggattagtcgcccacctttgatggatcagaaaccggtgcgaaagc 34722788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 174 - 285
Target Start/End: Original strand, 10106556 - 10106667
Alignment:
Q  174 taaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggat 273  Q
    ||||||||  ||||||| |||||||||||||||||||||  ||||||  |||  | |||||| |||||| || |||||||  ||||||||| || |||||    
T  10106556 taaggagcacctttcaaagacgtatccgagaaataccggattcgattctcagaaggaacaacgcttgattagcgcgcatgcttctatgcataagtcggat 10106655  T
Q  274 tagtcgtccacc 285  Q
    ||||||||||||    
T  10106656 tagtcgtccacc 10106667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 223 - 314
Target Start/End: Complemental strand, 34346376 - 34346285
Alignment:
Q  223 caggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||| |||||||||||  ||||| ||||| ||||| ||||||| | ||||| |||  |||| ||||||||||||||||||||||||||||    
T  34346376 cagggggaacaacacttggccagtgtgcatgcctctacgcatgagtcagattaatcgctcacctttggtgggtcggaaaccggtgcgaaagc 34346285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 313
Target Start/End: Original strand, 27725977 - 27726047
Alignment:
Q  243 cagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    ||||||||||| ||||| |||  |||||||||||||| |||||| |||||||||||||||||||| |||||    
T  27725977 cagtgcgcatgcctctacgcactagccggattagtcgcccaccaatggtgggtcggaaaccggtgtgaaag 27726047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 175 - 313
Target Start/End: Original strand, 33005721 - 33005858
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    ||||||||  |||| |||||||| ||| | ||||||||| ||  || ||||||||| |||||||||  ||||||||||| ||||| ||||||| | ||||    
T  33005721 aaggagctcatttctaggacgtacccgtggaataccgggttctgttcccaggggaa-caacacttggccagtgcgcatgcctctacgcatgaggcagatt 33005819  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    | |||  |||| || ||||||||||||||| ||||||||    
T  33005820 aatcgctcacctttagtgggtcggaaaccgatgcgaaag 33005858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 244 - 314
Target Start/End: Original strand, 44945631 - 44945701
Alignment:
Q  244 agtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||||||| ||||| ||| ||||||||||||||| ||||| || |||| ||||||||||||||||||||    
T  44945631 agtgcgcatgcctctacgcacgagccggattagtcgcccacctttagtggatcggaaaccggtgcgaaagc 44945701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 188 - 313
Target Start/End: Complemental strand, 39807009 - 39806884
Alignment:
Q  188 caaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccat 287  Q
    |||||||||| ||| | ||||||||| |||||| ||| | ||||||||  |||  ||||||||||| |||||  || ||| |||||||||| |||||| |    
T  39807009 caaggacgtacccggggaataccgggttcgattcccaagagaaacaacgtttggccagtgcgcatgcctctacacacgagtcggattagtcatccacctt 39806910  T
Q  288 tggtgggtcggaaaccggtgcgaaag 313  Q
    |||||| ||  |||||||||||||||    
T  39806909 tggtggttcataaaccggtgcgaaag 39806884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 192 - 313
Target Start/End: Original strand, 44193465 - 44193589
Alignment:
Q  192 gacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctc-tatgcat--gagccggattagtcgtccaccatt 288  Q
    |||||||||||| |||||| || |||||||  ||||| |||||| ||||| | ||| | ||||||| | | |||  |||| |||||||||| ||||||||    
T  44193465 gacgtatccgaggaataccaggttcgatttttagggggaacaacgcttgacccgtgtgaatgtctcctctacatacgagctggattagtcgcccaccatt 44193564  T
Q  289 ggtgggtcggaaaccggtgcgaaag 313  Q
    |||||||| ||||||||||||||||    
T  44193565 ggtgggtcagaaaccggtgcgaaag 44193589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 256 - 312
Target Start/End: Complemental strand, 1773700 - 1773644
Alignment:
Q  256 tctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 312  Q
    |||| |||||||  |||||||||||||||||||||||||||| ||||||||||||||    
T  1773700 tctacgcatgagttggattagtcgtccaccattggtgggtcgaaaaccggtgcgaaa 1773644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 250 - 314
Target Start/End: Complemental strand, 34130364 - 34130300
Alignment:
Q  250 catgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||||||| ||||||||| ||||||||||| ||||||||| | ||||||| ||||||||||||    
T  34130364 catgtctctacgcatgagccagattagtcgtctaccattggtagatcggaaatcggtgcgaaagc 34130300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 15234198 - 15234059
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||| ||| | |||||  || ||||||  |||||| |||||||||||| ||||||||||| ||||| |||  ||   ||||    
T  15234198 aaggagctccttccaaggacgtacccggggaatactaggttcgattctcagggggaacaacacttgaccagtgcgcatgcctctacgcacaagttagatt 15234099  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||| || | ||| | |||||||||||| |||||||||    
T  15234098 agtcgttcatctttgataggtcggaaaccgatgcgaaagc 15234059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 313
Target Start/End: Original strand, 44773300 - 44773370
Alignment:
Q  243 cagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    ||||| ||||| |||| ||| ||||||||||||||||  |||| ||| |||||||||||||||||||||||    
T  44773300 cagtgtgcatgcctctgtgcgtgagccggattagtcgctcacctttgatgggtcggaaaccggtgcgaaag 44773370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 261 - 313
Target Start/End: Original strand, 792209 - 792261
Alignment:
Q  261 gcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||||| ||||    
T  792209 gcatgagccggattagtcgcccatctttggtgggtcggaaaccggtgcaaaag 792261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 175 - 279
Target Start/End: Complemental strand, 21180451 - 21180347
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||| ||||  ||||||||  |||||| ||| ||  |||||||||||  |||||| |||| ||||| ||| ||||||||||    
T  21180451 aaggagctccttccaaggacgtacccgaagaataccggattcgattcccatggagaacaacacttggccagtgcacatgcctctacgcacgagccggatt 21180352  T
Q  275 agtcg 279  Q
    |||||    
T  21180351 agtcg 21180347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 175 - 279
Target Start/End: Original strand, 41187818 - 41187922
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||||||||| |||||||   || |||   |||  ||||||| ||||| ||||||||||| ||||| ||||||| ||||||    
T  41187818 aaggagctccttccaaggacgtatccgaggaataccgaattcaattcttaggaaaaacaacgcttgaccagtgcgcatgcctctacgcatgagacggatt 41187917  T
Q  275 agtcg 279  Q
    |||||    
T  41187918 agtcg 41187922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 279
Target Start/End: Original strand, 15079465 - 15079556
Alignment:
Q  188 caaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcg 279  Q
    |||||||||| ||| | ||||| ||| |||||||||||||| |||||| ||||| ||||| ||||| ||||| ||| |||||  ||||||||    
T  15079465 caaggacgtacccggggaatacagggttcgatttccagggggaacaacgcttgaccagtgtgcatgactctacgcacgagccaaattagtcg 15079556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 313
Target Start/End: Complemental strand, 16813239 - 16813164
Alignment:
Q  238 ttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    |||| |||| |||||| ||||||||| ||||||||||||||||||| | ||||| ||| ||||| | |||||||||    
T  16813239 ttgaccagtacgcatgcctctatgcacgagccggattagtcgtccatctttggtaggttggaaatcagtgcgaaag 16813164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 313
Target Start/End: Complemental strand, 16852518 - 16852443
Alignment:
Q  238 ttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    |||| |||| |||||| ||||||||| ||||||||||||||||||| | ||||| ||| ||||| | |||||||||    
T  16852518 ttgaccagtacgcatgcctctatgcacgagccggattagtcgtccatctttggtaggttggaaatcagtgcgaaag 16852443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 314
Target Start/End: Original strand, 24179605 - 24179676
Alignment:
Q  243 cagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||| |||| ||||| ||||||||||||||||||||||| | |||||||||   |||||||||| |||||    
T  24179605 cagtgcacatgcctctacgcatgagccggattagtcgtccatctttggtgggttaaaaaccggtgcaaaagc 24179676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 314
Target Start/End: Complemental strand, 34738390 - 34738331
Alignment:
Q  255 ctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||| ||| ||| |||||||||||||||||| |||| |||||||||||||||| |||||    
T  34738390 ctctacgcacgagtcggattagtcgtccaccaatggtaggtcggaaaccggtgcaaaagc 34738331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 303
Target Start/End: Complemental strand, 37805015 - 37804900
Alignment:
Q  188 caaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccat 287  Q
    |||||||||| ||||||||||||||  ||||||  |||||| || ||| ||||   |||||||||| | ||| ||||||| | |||| || | |||||||    
T  37805015 caaggacgtacccgagaaataccggattcgattcacagggggaataacgcttggctagtgcgcatgccgctacgcatgagtcagatttgttgcccaccat 37804916  T
Q  288 tggtgggtcggaaacc 303  Q
    || |||||||||||||    
T  37804915 tgatgggtcggaaacc 37804900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 313
Target Start/End: Complemental strand, 18649095 - 18649025
Alignment:
Q  243 cagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    ||||||||||| ||||| ||||||| |||||||||||  |||  ||||||||| |||||||| ||||||||    
T  18649095 cagtgcgcatgcctctacgcatgagtcggattagtcgctcacttttggtgggttggaaaccgttgcgaaag 18649025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 312
Target Start/End: Original strand, 21641990 - 21642056
Alignment:
Q  246 tgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 312  Q
    |||||||| ||||| |||||||||| |||| ||| || || ||||||||||| ||||||||||||||    
T  21641990 tgcgcatgcctctacgcatgagccgaattaatcgcccgcctttggtgggtcgaaaaccggtgcgaaa 21642056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 279
Target Start/End: Complemental strand, 30721942 - 30721888
Alignment:
Q  225 ggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcg 279  Q
    |||| ||||||||||| |||||||||||||||||| | ||||| |||||||||||    
T  30721942 gggggaacaacacttggtcagtgcgcatgtctctacgtatgagtcggattagtcg 30721888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 297
Target Start/End: Complemental strand, 45263804 - 45263682
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| |||||||  |  |||||| | ||||||||| |||||| |||| || |||||| ||||  ||||||||||| ||||| ||| ||||||||||    
T  45263804 aaggagctcctttcaaaaatttatccggggaataccgggttcgattcccagagggaacaacgcttggccagtgcgcatgcctctacgcacgagccggatt 45263705  T
Q  275 agtcgtccaccattggtgggtcg 297  Q
    | |||  || | |||||||||||    
T  45263704 aatcgctcatctttggtgggtcg 45263682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 237 - 314
Target Start/End: Original strand, 5035319 - 5035396
Alignment:
Q  237 cttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||| ||||||||||||||||| ||| || |||||||| || |||||| ||  |||||||||||||  |||||||||    
T  5035319 cttgaccagtgcgcatgtctctacgcacgaaccggattaatcatccacctttaatgggtcggaaacccatgcgaaagc 5035396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 51
Target Start/End: Complemental strand, 19668108 - 19668071
Alignment:
Q  14 ttgtatcaaatggttgttcaaatatcattgcccatttg 51  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  19668108 ttgtatcaaatggttgttcaaatatcattgcccttttg 19668071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 261 - 314
Target Start/End: Original strand, 44023350 - 44023403
Alignment:
Q  261 gcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||| || |||||||||||| | ||||||||| ||||||||||||||||||    
T  44023350 gcatgagtcgaattagtcgtccatctttggtgggttggaaaccggtgcgaaagc 44023403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 314
Target Start/End: Complemental strand, 10702230 - 10702174
Alignment:
Q  258 tatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||||||| |||||||||| |||||| || ||||||| ||||| |||||||||||    
T  10702230 tatgcatgagtcggattagtcatccacctttagtgggtcagaaactggtgcgaaagc 10702174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 314
Target Start/End: Complemental strand, 44548774 - 44548722
Alignment:
Q  262 catgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||||| ||||||||||||||| ||| ||| |||||||| |||||||||||    
T  44548774 catgagccagattagtcgtccacctttgatggatcggaaactggtgcgaaagc 44548722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 314
Target Start/End: Complemental strand, 13026480 - 13026409
Alignment:
Q  243 cagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||| ||||| ||||||||||||||||||  ||||  ||||| |||| ||||||| ||| |||||    
T  13026480 cagtgcgcatgcctctacgcatgagccggattagtcagccacttttggtaggtcagaaaccgatgcaaaagc 13026409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 314
Target Start/End: Original strand, 26805333 - 26805404
Alignment:
Q  243 cagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||| |||| ||||| ||||||| ||||||||||| ||||| ||||||| ||| |||||| ||| |||||    
T  26805333 cagtgcacatgcctctacgcatgagtcggattagtcgcccacctttggtggctcgaaaaccgatgcaaaagc 26805404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 312
Target Start/End: Complemental strand, 36480504 - 36480438
Alignment:
Q  243 cagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 312  Q
    ||||||||||| ||||| ||||||||||||   |||||||||| ||| ||||||| ||| ||||||||||    
T  36480504 cagtgcgcatgcctctacgcatgagccgga---gtcgtccacctttgatgggtcgaaaatcggtgcgaaa 36480438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 14853504 - 14853364
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatg--tctctatgcatgagccgga 272  Q
    ||||| || |||||||||| ||||||| | |||||| |  ||||||| |||||| ||||||  |||  ||||||| |||  ||||||  |||||| ||||    
T  14853504 aaggaactcctttcaaggatgtatccggggaataccagattcgattttcagggggaacaacttttggccagtgcgtatgcctctctactcatgagtcgga 14853405  T
Q  273 ttagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||| | || |||| || |||| ||||||||||||    
T  14853404 ttagtcgtccatctttagtggatc-gaaatcggtgcgaaagc 14853364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 314
Target Start/End: Original strand, 29299353 - 29299386
Alignment:
Q  281 ccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||| ||||||||||||||||||||||||||||    
T  29299353 ccacctttggtgggtcggaaaccggtgcgaaagc 29299386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 304
Target Start/End: Complemental strand, 35443922 - 35443873
Alignment:
Q  255 ctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccg 304  Q
    ||||| |||||||||||||||||||||||  |||| ||| ||||||||||    
T  35443922 ctctacgcatgagccggattagtcgtccattattgatggatcggaaaccg 35443873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 284
Target Start/End: Original strand, 41187678 - 41187787
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| |||  ||||||||||| ||  ||||||||| ||||||   ||||| |||||||||||| |||||  |||| ||||| ||||||| |  |||    
T  41187678 aaggagctccttctaaggacgtatctgaagaataccgggttcgattatgagggggaacaacacttgaccagtgtccatgcctctacgcatgagacatatt 41187777  T
Q  275 agtcgtccac 284  Q
    ||||| ||||    
T  41187778 agtcgcccac 41187787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 76; Significance: 4e-35; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 319394 - 319533
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||||||| | ||||||||| | |||||| ||||| |||||| ||||  ||||||||||  |||||||||||||| |||||    
T  319394 aaggagctccttccaaggacgtatccggggaataccgggtttgatttctagggggaacaacgcttggccagtgcgcatccctctatgcatgagctggatt 319493  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||| |||||||| |||||||||||||||||||    
T  319494 agtcgtccacctttggtggggcggaaaccggtgcgaaagc 319533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 542 - 681
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||| ||| | ||||||||| ||||||  |||||| |||||||||||||||||| ||||| ||||| | ||||||| ||||    
T  542 aaggagctccttccaaggacgtacccggggaataccgggttcgattcgcagggggaacaacacttgatcagtgtgcatgcctctacgtatgagccagatt 641  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||  |||| ||||||||||||||||||||||||||||    
T  642 agtcgctcacctttggtgggtcggaaaccggtgcgaaagc 681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 205 - 314
Target Start/End: Original strand, 6857 - 6966
Alignment:
Q  205 aataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccg 304  Q
    ||||||||| |||||| ||||||| |||||||||||  ||||||||||| ||||| |||||||||||||||||||  |||| ||||||||||||||||||    
T  6857 aataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctttggtgggtcggaaaccg 6956  T
Q  305 gtgcgaaagc 314  Q
    ||||||||||    
T  6957 gtgcgaaagc 6966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 67; Significance: 9e-30; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 192 - 314
Target Start/End: Complemental strand, 8821 - 8699
Alignment:
Q  192 gacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggt 291  Q
    |||||||| ||| ||||||||| |||||| ||||||| |||||| ||||  |||||||| || ||||| |||||||| |||||||||||||||| |||||    
T  8821 gacgtatcagaggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcttgcctctacgcatgagctggattagtcgtccacctttggt 8722  T
Q  292 gggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||| |||||||||||    
T  8721 gggtcggaaactggtgcgaaagc 8699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 175 - 303
Target Start/End: Original strand, 9817 - 9945
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||| ||||| ||| ||||||||  |||||||||||||| |||||| ||||  ||||||||||| ||||| ||| ||||||||||    
T  9817 aaggagctccttccaaggatgtatctgaggaataccggattcgatttccagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggatt 9916  T
Q  275 agtcgtccaccattggtgggtcggaaacc 303  Q
    ||||||||||| |||||||||| ||||||    
T  9917 agtcgtccacctttggtgggtcagaaacc 9945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 175 - 304
Target Start/End: Original strand, 5945 - 6073
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||||||||| |||| ||| | ||||| ||| |||||||||||||| | |||| ||||  |||||| |||| ||||| ||||||| || |||    
T  5945 aaggagctcctttcaagggcgtacccggggaatactgggttcgatttccaggggga-caacgcttggccagtgcacatgcctctacgcatgagacgaatt 6043  T
Q  275 agtcgtccaccattggtgggtcggaaaccg 304  Q
    ||||||||||||||||||||||||||||||    
T  6044 agtcgtccaccattggtgggtcggaaaccg 6073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 175 - 310
Target Start/End: Original strand, 68489 - 68621
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||| ||| |||||| |||| |||||| ||||||| |||||| ||||    ||||||||| ||||| ||| ||||||||||    
T  68489 aaggagctccttccaaggacgtacccgggaaatatcgggttcgattcccagggggaacaacgcttgg---gtgcgcatgcctctacgcacgagccggatt 68585  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcga 310  Q
    ||||| ||||| ||||||||||| ||||||||||||    
T  68586 agtcgcccacctttggtgggtcgaaaaccggtgcga 68621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 12547 - 12684
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| ||||||||||  |||||||||||||| |||||| | ||||  |||||| ||||| ||||||||||| ||||| ||||||| ||||||    
T  12547 aaggagctacttccaaggacgtactcgagaaataccgggttcgattcctaggg--aacaacgcttgaccagtgcgcatgcctctacgcatgagtcggatt 12644  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||| ||||| ||| ||| |  |||||||||||||||||    
T  12645 agtcgcccacctttgatggattagaaaccggtgcgaaagc 12684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 205 - 313
Target Start/End: Original strand, 26185 - 26293
Alignment:
Q  205 aataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccg 304  Q
    ||||| ||| |||||||||||||| |||||| ||||  ||||| ||||| ||||| ||| |||||||||||||||||||| |||| || ||||||||||     
T  26185 aatactgggttcgatttccagggggaacaacgcttggccagtgtgcatgcctctacgcacgagccggattagtcgtccacaattgatgagtcggaaacca 26284  T
Q  305 gtgcgaaag 313  Q
    |||||||||    
T  26285 gtgcgaaag 26293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 237 - 313
Target Start/End: Complemental strand, 42907 - 42831
Alignment:
Q  237 cttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    |||| |||||||||||| |||||  |||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  42907 cttggtcagtgcgcatgcctctacacatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 42831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 256 - 312
Target Start/End: Original strand, 9495 - 9551
Alignment:
Q  256 tctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 312  Q
    |||| |||||||||  |||||||||||||| |||||||||| |||||||||||||||    
T  9495 tctacgcatgagccaaattagtcgtccacctttggtgggtcagaaaccggtgcgaaa 9551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 215 - 314
Target Start/End: Complemental strand, 155808 - 155709
Alignment:
Q  215 tcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||| ||||||| |||||| ||||   |||||||||| ||||| ||| ||||||||||||||| ||||| |||||||||||||| |||||||||||||    
T  155808 tcgattcccagggggaacaacgcttggctagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaagccggtgcgaaagc 155709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 188 - 314
Target Start/End: Complemental strand, 7959 - 7833
Alignment:
Q  188 caaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccat 287  Q
    |||||||||| ||| | ||||||||| | |||| ||| ||| || ||||||||  ||||||||||| ||||| |||| ||| |||||||||| ||||| |    
T  7959 caaggacgtacccggggaataccgggtttgattcccaaggggaaaaacacttggccagtgcgcatgcctctacgcattagctggattagtcgcccacctt 7860  T
Q  288 tggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||| |||||||||||| |||||||    
T  7859 tggtggatcggaaaccggtacgaaagc 7833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 95116 - 94978
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||| | ||||||| | |||||| || |||||||| |||  |||||||  |||| ||||||||||| || || ||||||||||||||    
T  95116 aaggagctccttccaagaaagtatccggggaataccaggttcgatttctagg--aaacaacgtttgaccagtgcgcatgcctttacgcatgagccggatt 95019  T
Q  275 agtcgtccacca-ttggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||| |||||| ||||||||||||||| |||||| |||||    
T  95018 agtcgcccaccatttggtgggtcggaaatcggtgcaaaagc 94978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 205 - 314
Target Start/End: Complemental strand, 1721 - 1612
Alignment:
Q  205 aataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccg 304  Q
    |||||| || |||||||||||||| ||||||  ||   ||||||||||| ||||| |||||||||  |||||||| ||||| ||||||||||| ||||||    
T  1721 aataccaggttcgatttccagggggaacaacgattagccagtgcgcatgcctctacgcatgagccaaattagtcgcccacctttggtgggtcgaaaaccg 1622  T
Q  305 gtgcgaaagc 314  Q
    ||||||||||    
T  1621 gtgcgaaagc 1612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 72605 - 72743
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||||| | ||| ||||||| |||||||||| ||| |||||| ||||| ||||||||||| ||| | |||| |||||||||    
T  72605 aaggagctccttccaaggacgtatcagggaa-taccgggttcgatttccaaggggaacaacgcttgaccagtgcgcatgcctcaaagcataagccggatt 72703  T
Q  275 agtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||| | | ||  ||||| || ||||||||| |||||||    
T  72704 agtcgcctatcaagggtggatctgaaaccggtacgaaagc 72743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 314
Target Start/End: Original strand, 72813 - 72866
Alignment:
Q  261 gcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||||||||||| | ||||  ||||||||| |||||||||| |||||    
T  72813 gcatgagccggattagtcgcctaccacaggtgggtcgaaaaccggtgcaaaagc 72866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 238 - 313
Target Start/End: Original strand, 224352 - 224427
Alignment:
Q  238 ttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    ||||||||||| |||  ||||| ||| ||||||||||||||||||| | |||||||||||||||||||||||||||    
T  224352 ttgatcagtgcacatacctctacgcacgagccggattagtcgtccatctttggtgggtcggaaaccggtgcgaaag 224427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 312
Target Start/End: Original strand, 186556 - 186626
Alignment:
Q  242 tcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 312  Q
    ||||||| |||| ||||| ||| |||||||||||||||| || | || |||||||||||||||||| ||||    
T  186556 tcagtgcacatgcctctacgcacgagccggattagtcgttcatctttagtgggtcggaaaccggtgtgaaa 186626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 223 - 313
Target Start/End: Original strand, 16899 - 16989
Alignment:
Q  223 caggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    ||||||||||||| |||| |||||||| ||||||||| ||| ||||| |||||||||  |||| ||||||||| |||||||| ||||||||    
T  16899 caggggaaacaacgcttggtcagtgcgtatgtctctacgcacgagccagattagtcgctcacctttggtgggttggaaaccgatgcgaaag 16989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 205 - 314
Target Start/End: Original strand, 41046 - 41155
Alignment:
Q  205 aataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccg 304  Q
    |||| |||| ||||||  || ||| ||||||||||| |||||| ||||| ||||| ||| ||||||||||||||| ||| | |||||| |||||||||||    
T  41046 aatatcgggttcgattctcaaggggaacaacacttggtcagtgtgcatgcctctacgcacgagccggattagtcgcccatctttggtgagtcggaaaccg 41145  T
Q  305 gtgcgaaagc 314  Q
    || |||||||    
T  41146 gttcgaaagc 41155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 279
Target Start/End: Complemental strand, 271211 - 271107
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggatt 274  Q
    |||||||| ||| |||||||||| |||   |||| |||| |||||| ||||||| |||||| |||| |||||||||||||||||| ||| ||||||| ||    
T  271211 aaggagctccttccaaggacgtacccggagaatatcgggttcgattcccagggggaacaacgcttggtcagtgcgcatgtctctacgcacgagccgggtt 271112  T
Q  275 agtcg 279  Q
    |||||    
T  271111 agtcg 271107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 313
Target Start/End: Complemental strand, 250094 - 250024
Alignment:
Q  243 cagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    ||||||||||| ||||| ||| |||||||||||||||  | || ||||||||||||||| |||||||||||    
T  250094 cagtgcgcatgcctctacgcacgagccggattagtcgctcgcctttggtgggtcggaaatcggtgcgaaag 250024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 314
Target Start/End: Original strand, 219409 - 219480
Alignment:
Q  243 cagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    ||||||||||| ||||| ||| || | |||||||||||||||| ||| ||| ||| |||||||||| |||||    
T  219409 cagtgcgcatgcctctacgcacgaactggattagtcgtccacctttgatggatcgaaaaccggtgcaaaagc 219480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 174 - 285
Target Start/End: Complemental strand, 2228 - 2117
Alignment:
Q  174 taaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggat 273  Q
    ||||||||  ||||||| |||||||||||||||||||||  ||||||  |||  | |||||| |||||| || |||||||  ||||||||| || |||||    
T  2228 taaggagcacctttcaaagacgtatccgagaaataccggattcgattctcagaaggaacaacgcttgattagcgcgcatgcttctatgcataagtcggat 2129  T
Q  274 tagtcgtccacc 285  Q
    ||||||||||||    
T  2128 tagtcgtccacc 2117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 313
Target Start/End: Original strand, 25100 - 25195
Alignment:
Q  217 gatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    ||||| |||||||| ||||| |||  |||||||||||| |||| ||||||  | ||||| ||||||||| ||||||| |||||||||||||||||||    
T  25100 gattttcaggggaa-caacatttggacagtgcgcatgtttctacgcatgaatcagattaatcgtccacctttggtggatcggaaaccggtgcgaaag 25195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 179 - 313
Target Start/End: Original strand, 12646 - 12780
Alignment:
Q  179 agcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtc 278  Q
    |||| ||| |||||||||  ||| | ||||||||| ||||||   ||| | |||||| ||||  ||||| ||||| ||||| ||| || |||||||||||    
T  12646 agctccttccaaggacgtgcccggggaataccgggttcgattcagaggaggaacaacgcttggccagtgtgcatgcctctacgcacgaaccggattagtc 12745  T
Q  279 gtccaccattggtgggtcggaaaccggtgcgaaag 313  Q
    | ||||| ||| |||||| ||||||||||||||||    
T  12746 gcccacctttgatgggtcagaaaccggtgcgaaag 12780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 174 - 304
Target Start/End: Original strand, 17361 - 17491
Alignment:
Q  174 taaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggat 273  Q
    |||||| || |||| || |||| ||||||| | || |||  ||||||  ||||||||| ||  ||||| |||||||||||  ||||  || |||||||||    
T  17361 taaggaactccttttaaagacggatccgaggattatcggattcgattctcaggggaaaaaatgcttgaccagtgcgcatgcttctacacacgagccggat 17460  T
Q  274 tagtcgtccaccattggtgggtcggaaaccg 304  Q
    |||||| ||||||||| ||||||||||||||    
T  17461 tagtcgcccaccattgatgggtcggaaaccg 17491  T

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Target: scaffold0001 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 230 - 314
Target Start/End: Complemental strand, 65234 - 65150
Alignment:
Q  230 aacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||| ||||  ||||||||||||||||| |||||||| ||||||||||  |||  ||| | | ||||||||||||||||||||    
T  65234 aacaacgcttggccagtgcgcatgtctctacgcatgagctggattagtcgctcacttttgatagatcggaaaccggtgcgaaagc 65150  T

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Target: scaffold0079 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 272 - 314
Target Start/End: Original strand, 8232 - 8274
Alignment:
Q  272 attagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  8232 attagtcgtccacctttggtaggtcggaaaccggtgcgaaagc 8274  T

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Target: scaffold0155 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 312
Target Start/End: Original strand, 19307 - 19364
Alignment:
Q  255 ctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 312  Q
    ||||| ||||||||||||||||||| |||  ||| |||| ||||||||||||||||||    
T  19307 ctctacgcatgagccggattagtcggccattattagtggatcggaaaccggtgcgaaa 19364  T

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Target: scaffold0024 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 314
Target Start/End: Original strand, 149405 - 149496
Alignment:
Q  223 caggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 314  Q
    |||||| |||||| ||||| ||||| ||||| ||||| | | |||   ||||||||| |||||| ||||||||| ||||||||||| |||||    
T  149405 cagggggaacaacgcttgaccagtgtgcatgcctctacgtacgaggtagattagtcgcccaccaatggtgggtcagaaaccggtgcaaaagc 149496  T

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Target: scaffold0013 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 313
Target Start/End: Original strand, 51735 - 51837
Alignment:
Q  207 taccggggtcgatttccaggggaaacaacacttgatcagtgcgcatgtctctatgcatgagccggattagtcgtccaccattggtgggtcggaaaccggt 306  Q
    ||||||| |||||| |||| || |||||| ||||  |||||||||||||    |||| ||||||||| ||||| ||||| ||| ||| || |||||||||    
T  51735 taccgggttcgattcccagagggaacaacgcttggccagtgcgcatgtc----tgcacgagccggatcagtcgcccacctttgatggatctgaaaccggt 51830  T
Q  307 gcgaaag 313  Q
    | |||||    
T  51831 gtgaaag 51837  T

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Target: scaffold0332 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 15303 - 15359
Alignment:
Q  175 aaggagcttctttcaaggacgtatccgagaaataccggggtcgatttccaggggaaa 231  Q
    |||||||| ||| |||||| ||| ||| | ||||||||| |||||||||||||||||    
T  15303 aaggagctccttacaaggaagtacccggggaataccgggttcgatttccaggggaaa 15359  T

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