View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7431_high_1 (Length: 270)
Name: NF7431_high_1
Description: NF7431
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7431_high_1 |
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Alignment Details
Target: chr8 (Bit Score: 241; Significance: 1e-133; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 23276522 - 23276774
Alignment:
| Q |
1 |
ttatagcttacaaattccagtgttgaaaagctagagagataattatatgacaatgattatgatacgataaaataagaactaatgatatcaagaatggaag |
100 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23276522 |
ttatagcttacaaattccagtattgaaaagctagagagataattatatgacaataattatgatacgataaaataagaactaatgatatcaagaatggaag |
23276621 |
T |
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| Q |
101 |
attagtgattaagacaaggaattgaaagactaaaaatgaaatttctgagttcgtgagattgaaaggttccttgagtgaactttgagtgcttatttgctag |
200 |
Q |
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| T |
23276622 |
attagtgatcaagacaaggaattgaaagactaaaaatgaaatttctgagttcgtgagattgaaaggttccttgagtgaactttgagtgcttatttgctag |
23276721 |
T |
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| Q |
201 |
gaattgtttatctaatcattaaagggagtcttcaacaattaagacttaagata |
253 |
Q |
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| T |
23276722 |
gaattgtttatctaatcattaaagggagtcttcaacaattaagacttaagata |
23276774 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 23401509 - 23401374
Alignment:
| Q |
1 |
ttatagcttacaaattccagtgttgaaaagctagagagataattatatgacaatgattatgatacgataaaataagaactaatgatatcaagaatggaag |
100 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23401509 |
ttatagcttacaaattccagtattgaaaagctagagagataattatatgacaatgattatgatacgataaaataagaactaatgatatcaagaatggaag |
23401410 |
T |
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| Q |
101 |
attagtgattaagacaaggaattgaaagactaaaaa |
136 |
Q |
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||||||||||||||||||||||| |||||||||||| |
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| T |
23401409 |
attagtgattaagacaaggaattaaaagactaaaaa |
23401374 |
T |
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