View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7431_low_4 (Length: 203)
Name: NF7431_low_4
Description: NF7431
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7431_low_4 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 173; Significance: 3e-93; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 13 - 203
Target Start/End: Original strand, 46557133 - 46557322
Alignment:
| Q |
13 |
aatattaacaagagttttgaaatgaaaacaaaaaataacatatattgagttttgaatgttattgattt-gttaccatctatgctttggaggacttttttg |
111 |
Q |
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| T |
46557133 |
aatattaacaagagttttgaaatgaaaacaaaaaataacatatattgagttttgaatgttattgattttgttaccatctatgctttggaggacttttttg |
46557232 |
T |
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| Q |
112 |
acttttctcatgcaaccttgacaatgaatggagactcttaacgtacagctctgaaagaacaagaacaagaacagagacgtatgttagaagta |
203 |
Q |
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| T |
46557233 |
acttttctcatgcaaccttgacaatgaatggagactcttaacgtacagctctgaaagaacaagaac--gaacagagacgtatgttagaagta |
46557322 |
T |
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