View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7432_high_10 (Length: 268)

Name: NF7432_high_10
Description: NF7432
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7432_high_10
NF7432_high_10
[»] chr7 (40 HSPs)
chr7 (1-186)||(2640335-2640521)
chr7 (1-191)||(42731499-42731690)
chr7 (1-186)||(3914223-3914409)
chr7 (1-186)||(42019754-42019940)
chr7 (1-186)||(32053300-32053486)
chr7 (1-186)||(48788960-48789146)
chr7 (10-186)||(10935879-10936056)
chr7 (1-186)||(28469166-28469351)
chr7 (15-185)||(24388905-24389076)
chr7 (11-186)||(27396762-27396938)
chr7 (11-186)||(45010683-45010856)
chr7 (49-186)||(23181199-23181337)
chr7 (1-186)||(37656937-37657121)
chr7 (1-101)||(17102160-17102260)
chr7 (1-101)||(19204629-19204729)
chr7 (11-101)||(6571153-6571243)
chr7 (12-101)||(32680763-32680852)
chr7 (12-101)||(39686702-39686791)
chr7 (13-101)||(22871477-22871565)
chr7 (13-101)||(30948329-30948417)
chr7 (12-101)||(34928818-34928907)
chr7 (1-101)||(27991879-27991979)
chr7 (2-101)||(6253611-6253710)
chr7 (12-173)||(13311204-13311363)
chr7 (55-185)||(40379855-40379986)
chr7 (11-101)||(32298903-32298993)
chr7 (140-186)||(45010901-45010947)
chr7 (140-191)||(17102100-17102151)
chr7 (140-191)||(27991819-27991870)
chr7 (140-180)||(34928916-34928956)
chr7 (140-180)||(39686800-39686840)
chr7 (140-186)||(6571098-6571144)
chr7 (140-186)||(22871574-22871620)
chr7 (140-186)||(32299002-32299048)
chr7 (142-191)||(6253551-6253600)
chr7 (142-186)||(19204574-19204618)
chr7 (140-180)||(30948426-30948466)
chr7 (140-180)||(32680861-32680901)
chr7 (84-130)||(34928792-34928838)
chr7 (140-181)||(11400266-11400307)
[»] chr4 (65 HSPs)
chr4 (1-186)||(37976310-37976496)
chr4 (1-186)||(52909338-52909524)
chr4 (2-186)||(54086853-54087038)
chr4 (1-186)||(34765537-34765723)
chr4 (2-186)||(53129664-53129849)
chr4 (1-186)||(17356082-17356265)
chr4 (1-186)||(35028155-35028341)
chr4 (1-186)||(35508397-35508583)
chr4 (1-185)||(14801822-14802007)
chr4 (12-186)||(53701897-53702072)
chr4 (1-182)||(15507830-15508012)
chr4 (1-186)||(24411443-24411629)
chr4 (1-101)||(49879364-49879464)
chr4 (12-112)||(51692679-51692779)
chr4 (12-101)||(27934672-27934761)
chr4 (17-101)||(13058177-13058261)
chr4 (1-101)||(24711251-24711351)
chr4 (1-101)||(44967226-44967326)
chr4 (12-101)||(34837242-34837331)
chr4 (12-101)||(38012310-38012399)
chr4 (1-101)||(7451974-7452074)
chr4 (1-101)||(37248376-37248476)
chr4 (2-101)||(50418826-50418925)
chr4 (1-99)||(16005980-16006078)
chr4 (1-115)||(46661071-46661185)
chr4 (12-101)||(4982894-4982983)
chr4 (12-101)||(9144934-9145023)
chr4 (12-101)||(9400687-9400776)
chr4 (12-101)||(22566939-22567028)
chr4 (12-101)||(33247441-33247530)
chr4 (12-101)||(42738199-42738288)
chr4 (1-101)||(18831489-18831588)
chr4 (1-101)||(36009001-36009101)
chr4 (2-101)||(23613449-23613548)
chr4 (12-101)||(32950282-32950371)
chr4 (1-101)||(43155686-43155784)
chr4 (10-101)||(5369087-5369178)
chr4 (140-186)||(18831434-18831480)
chr4 (140-180)||(38012261-38012301)
chr4 (140-191)||(13058117-13058168)
chr4 (140-191)||(23613389-23613440)
chr4 (139-186)||(24711196-24711243)
chr4 (140-191)||(36009110-36009161)
chr4 (140-191)||(44967335-44967386)
chr4 (140-186)||(37248321-37248367)
chr4 (140-186)||(49879473-49879519)
chr4 (140-186)||(50418934-50418980)
chr4 (140-193)||(43155793-43155846)
chr4 (140-181)||(52298116-52298157)
chr4 (140-180)||(32950233-32950273)
chr4 (140-180)||(34837340-34837380)
chr4 (140-191)||(5369027-5369078)
chr4 (140-185)||(16005924-16005969)
chr4 (140-180)||(4982992-4983032)
chr4 (140-180)||(9145032-9145072)
chr4 (140-180)||(27934623-27934663)
chr4 (140-180)||(42738297-42738337)
chr4 (134-186)||(51692638-51692690)
chr4 (84-150)||(23613518-23613585)
chr4 (84-130)||(9144908-9144954)
chr4 (140-186)||(16605687-16605733)
chr4 (140-180)||(9400785-9400825)
chr4 (140-180)||(22566890-22566930)
chr4 (140-180)||(24349765-24349805)
chr4 (140-180)||(33247539-33247579)
[»] chr2 (40 HSPs)
chr2 (12-188)||(36755176-36755353)
chr2 (1-186)||(37895504-37895690)
chr2 (11-186)||(44713928-44714104)
chr2 (2-186)||(2318243-2318428)
chr2 (1-185)||(39423601-39423786)
chr2 (11-186)||(36382246-36382422)
chr2 (1-186)||(15848173-15848359)
chr2 (1-186)||(22051151-22051336)
chr2 (1-186)||(36479803-36479989)
chr2 (13-186)||(10712808-10712982)
chr2 (1-101)||(16099195-16099295)
chr2 (12-101)||(1695908-1695997)
chr2 (12-101)||(13995841-13995930)
chr2 (12-101)||(14900651-14900740)
chr2 (12-101)||(33062218-33062307)
chr2 (12-101)||(41248727-41248816)
chr2 (1-101)||(6658018-6658118)
chr2 (1-101)||(39498450-39498550)
chr2 (15-97)||(11163225-11163307)
chr2 (15-101)||(45556252-45556338)
chr2 (12-101)||(33739843-33739932)
chr2 (61-186)||(34447898-34448023)
chr2 (12-113)||(17266532-17266633)
chr2 (140-191)||(39498390-39498441)
chr2 (140-191)||(6657958-6658009)
chr2 (140-191)||(16099135-16099186)
chr2 (140-186)||(11163320-11163366)
chr2 (140-180)||(1696006-1696046)
chr2 (140-180)||(13995939-13995979)
chr2 (140-180)||(41248825-41248865)
chr2 (140-181)||(11721387-11721428)
chr2 (140-193)||(45556190-45556243)
chr2 (140-180)||(14900749-14900789)
chr2 (140-180)||(33739794-33739834)
chr2 (139-186)||(25892479-25892526)
chr2 (140-186)||(6573131-6573177)
chr2 (84-130)||(11163196-11163242)
chr2 (140-186)||(25893515-25893561)
chr2 (140-181)||(17266488-17266529)
chr2 (140-180)||(33062316-33062356)
[»] chr6 (20 HSPs)
chr6 (1-188)||(30803944-30804132)
chr6 (1-183)||(30725847-30726030)
chr6 (2-191)||(12080716-12080906)
chr6 (12-186)||(33517619-33517794)
chr6 (11-186)||(11392923-11393099)
chr6 (12-186)||(21627881-21628056)
chr6 (2-186)||(3059342-3059526)
chr6 (1-101)||(30337589-30337689)
chr6 (12-101)||(14196783-14196872)
chr6 (12-101)||(25486097-25486185)
chr6 (12-101)||(28000553-28000642)
chr6 (1-186)||(33647048-33647222)
chr6 (11-101)||(17734363-17734451)
chr6 (140-180)||(363096-363136)
chr6 (140-186)||(17734460-17734506)
chr6 (140-186)||(30337534-30337580)
chr6 (140-180)||(28000651-28000691)
chr6 (84-130)||(363012-363058)
chr6 (84-130)||(21627855-21627901)
chr6 (140-180)||(14196881-14196921)
[»] chr1 (66 HSPs)
chr1 (1-183)||(34464606-34464789)
chr1 (1-188)||(37578349-37578537)
chr1 (2-188)||(1841542-1841729)
chr1 (1-186)||(1103546-1103732)
chr1 (1-186)||(14879056-14879242)
chr1 (1-188)||(35152426-35152614)
chr1 (1-186)||(6367647-6367833)
chr1 (1-186)||(43758907-43759093)
chr1 (1-186)||(30711412-30711598)
chr1 (18-186)||(24009715-24009884)
chr1 (12-186)||(41098818-41098993)
chr1 (1-186)||(17662007-17662193)
chr1 (12-185)||(13914236-13914409)
chr1 (26-186)||(46163115-46163276)
chr1 (1-186)||(48779202-48779390)
chr1 (1-186)||(32917345-32917531)
chr1 (1-186)||(42248558-42248744)
chr1 (18-186)||(40210544-40210713)
chr1 (1-113)||(36694439-36694551)
chr1 (1-113)||(36710540-36710652)
chr1 (11-186)||(4960625-4960804)
chr1 (2-113)||(23209519-23209630)
chr1 (12-186)||(19017797-19017972)
chr1 (12-150)||(19323013-19323152)
chr1 (1-104)||(40772641-40772744)
chr1 (1-114)||(49722885-49722997)
chr1 (1-113)||(19515944-19516056)
chr1 (1-186)||(7821039-7821225)
chr1 (12-101)||(4716636-4716725)
chr1 (1-101)||(47999280-47999380)
chr1 (14-101)||(24905337-24905424)
chr1 (1-101)||(183378-183479)
chr1 (12-101)||(52134208-52134297)
chr1 (17-101)||(28011503-28011587)
chr1 (12-100)||(31514486-31514574)
chr1 (2-101)||(26024563-26024662)
chr1 (11-101)||(10304056-10304146)
chr1 (12-101)||(33442762-33442851)
chr1 (29-101)||(25648024-25648096)
chr1 (80-150)||(19323128-19323199)
chr1 (140-186)||(36694545-36694591)
chr1 (140-186)||(36710646-36710692)
chr1 (140-181)||(10304152-10304193)
chr1 (80-180)||(13914159-13914260)
chr1 (141-186)||(40772592-40772637)
chr1 (140-180)||(4716734-4716774)
chr1 (140-180)||(52134159-52134199)
chr1 (140-191)||(183488-183539)
chr1 (140-191)||(25647964-25648015)
chr1 (140-186)||(19515904-19515950)
chr1 (140-186)||(26024508-26024554)
chr1 (139-181)||(42267393-42267435)
chr1 (140-181)||(10304013-10304054)
chr1 (140-180)||(24905433-24905473)
chr1 (140-180)||(28011454-28011494)
chr1 (140-180)||(31514583-31514623)
chr1 (140-180)||(33442860-33442900)
chr1 (142-181)||(16970834-16970873)
chr1 (140-191)||(47999389-47999440)
chr1 (84-130)||(19017771-19017817)
chr1 (140-186)||(23209624-23209670)
chr1 (84-130)||(52134277-52134323)
chr1 (140-181)||(27999148-27999189)
chr1 (140-181)||(34849101-34849142)
chr1 (140-181)||(34850362-34850403)
chr1 (84-180)||(41098973-41099070)
[»] chr5 (59 HSPs)
chr5 (1-186)||(17202484-17202670)
chr5 (4-186)||(29646522-29646705)
chr5 (1-186)||(186504-186690)
chr5 (1-186)||(8322489-8322675)
chr5 (1-186)||(11047522-11047708)
chr5 (1-186)||(14194580-14194766)
chr5 (1-186)||(39453385-39453570)
chr5 (1-186)||(21265300-21265484)
chr5 (2-186)||(5993974-5994159)
chr5 (11-186)||(35512233-35512409)
chr5 (1-186)||(16157012-16157198)
chr5 (1-186)||(32242327-32242513)
chr5 (2-186)||(38442153-38442337)
chr5 (12-186)||(19892476-19892651)
chr5 (4-186)||(20814295-20814478)
chr5 (1-186)||(10684024-10684209)
chr5 (2-186)||(18247169-18247353)
chr5 (3-186)||(13362386-13362571)
chr5 (1-186)||(5024176-5024361)
chr5 (11-186)||(13962949-13963124)
chr5 (1-130)||(6301685-6301814)
chr5 (13-171)||(27937188-27937347)
chr5 (1-113)||(6150579-6150691)
chr5 (1-113)||(18670324-18670436)
chr5 (1-124)||(19517755-19517878)
chr5 (11-101)||(24547323-24547413)
chr5 (1-101)||(38475190-38475290)
chr5 (12-101)||(1506107-1506196)
chr5 (12-101)||(6758033-6758122)
chr5 (12-101)||(31482570-31482659)
chr5 (2-101)||(3529031-3529130)
chr5 (2-113)||(28269580-28269691)
chr5 (17-101)||(28771042-28771126)
chr5 (12-99)||(16083116-16083203)
chr5 (12-101)||(41930656-41930745)
chr5 (15-101)||(27587288-27587372)
chr5 (12-101)||(297182-297271)
chr5 (1-113)||(35920385-35920487)
chr5 (1-101)||(11761889-11761988)
chr5 (140-191)||(3529139-3529190)
chr5 (134-186)||(35920475-35920527)
chr5 (84-173)||(12904852-12904942)
chr5 (140-186)||(28269685-28269731)
chr5 (140-186)||(38475296-38475342)
chr5 (140-185)||(28771135-28771180)
chr5 (140-180)||(1506058-1506098)
chr5 (142-186)||(6150539-6150583)
chr5 (140-186)||(24547422-24547468)
chr5 (142-191)||(11761829-11761878)
chr5 (140-180)||(297280-297320)
chr5 (140-180)||(6758131-6758171)
chr5 (142-186)||(18670284-18670328)
chr5 (140-180)||(31482668-31482708)
chr5 (140-180)||(41930607-41930647)
chr5 (140-191)||(27587228-27587279)
chr5 (140-186)||(16083062-16083108)
chr5 (140-186)||(20840618-20840664)
chr5 (84-180)||(5994129-5994226)
chr5 (58-157)||(4700325-4700425)
[»] chr3 (41 HSPs)
chr3 (1-186)||(43384368-43384554)
chr3 (1-186)||(9294115-9294301)
chr3 (1-186)||(23458136-23458322)
chr3 (11-186)||(40758229-40758405)
chr3 (15-185)||(26463769-26463940)
chr3 (2-186)||(33689539-33689722)
chr3 (1-150)||(36417809-36417959)
chr3 (11-130)||(42342907-42343026)
chr3 (1-113)||(40033647-40033759)
chr3 (1-113)||(46474940-46475052)
chr3 (11-101)||(2796319-2796409)
chr3 (15-101)||(51994088-51994174)
chr3 (12-101)||(8041756-8041845)
chr3 (12-101)||(48322545-48322634)
chr3 (12-101)||(54466563-54466652)
chr3 (12-101)||(10770658-10770748)
chr3 (12-101)||(19741091-19741180)
chr3 (12-101)||(36314466-36314555)
chr3 (15-101)||(55052450-55052536)
chr3 (190-251)||(20359293-20359354)
chr3 (2-73)||(53756923-53756993)
chr3 (93-188)||(40506036-40506132)
chr3 (58-181)||(41988052-41988175)
chr3 (140-191)||(51994183-51994234)
chr3 (140-186)||(2796264-2796310)
chr3 (140-185)||(19741189-19741234)
chr3 (92-186)||(53756829-53756924)
chr3 (139-186)||(55052544-55052591)
chr3 (140-186)||(33156291-33156337)
chr3 (140-186)||(40033753-40033799)
chr3 (140-186)||(46474900-46474946)
chr3 (140-180)||(8041707-8041747)
chr3 (140-180)||(10770757-10770797)
chr3 (140-180)||(36314564-36314604)
chr3 (140-180)||(48322643-48322683)
chr3 (140-180)||(54466514-54466554)
chr3 (84-130)||(36314440-36314486)
chr3 (84-130)||(54466632-54466678)
chr3 (84-130)||(55052421-55052467)
chr3 (140-181)||(39399389-39399430)
chr3 (140-181)||(54317928-54317969)
[»] chr8 (47 HSPs)
chr8 (3-186)||(16388686-16388869)
chr8 (1-186)||(36928561-36928747)
chr8 (2-185)||(35756668-35756852)
chr8 (1-186)||(13186145-13186330)
chr8 (1-186)||(40318121-40318307)
chr8 (10-186)||(4994823-4995000)
chr8 (2-186)||(31608671-31608856)
chr8 (14-186)||(36186237-36186410)
chr8 (2-183)||(4405820-4406000)
chr8 (11-186)||(39071761-39071937)
chr8 (11-106)||(38862763-38862858)
chr8 (1-101)||(12199107-12199207)
chr8 (1-101)||(12443535-12443635)
chr8 (11-101)||(12273051-12273141)
chr8 (11-101)||(23698442-23698532)
chr8 (1-101)||(1425210-1425310)
chr8 (1-101)||(38955843-38955943)
chr8 (1-99)||(23663702-23663800)
chr8 (12-101)||(2266632-2266721)
chr8 (12-101)||(44407025-44407114)
chr8 (11-99)||(22915556-22915644)
chr8 (13-101)||(38845468-38845556)
chr8 (11-101)||(8316786-8316876)
chr8 (12-101)||(11674834-11674923)
chr8 (12-101)||(36325374-36325463)
chr8 (12-101)||(40775818-40775907)
chr8 (12-101)||(3041624-3041713)
chr8 (1-181)||(31873051-31873237)
chr8 (140-191)||(1425319-1425370)
chr8 (140-186)||(23663811-23663857)
chr8 (140-186)||(23698541-23698587)
chr8 (140-186)||(38862703-38862749)
chr8 (140-180)||(2266583-2266623)
chr8 (140-180)||(12199216-12199256)
chr8 (140-180)||(12443644-12443684)
chr8 (140-186)||(8316885-8316931)
chr8 (140-186)||(12273150-12273196)
chr8 (140-186)||(22915655-22915701)
chr8 (140-180)||(3041722-3041762)
chr8 (140-180)||(36325325-36325365)
chr8 (140-180)||(38845565-38845605)
chr8 (140-180)||(40775916-40775956)
chr8 (140-180)||(44407123-44407163)
chr8 (12-75)||(34685455-34685518)
chr8 (140-191)||(38955783-38955834)
chr8 (140-181)||(24085864-24085905)
chr8 (140-180)||(35449875-35449915)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-186)||(69050-69236)
[»] scaffold0295 (1 HSPs)
scaffold0295 (1-186)||(2228-2414)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-185)||(37720-37905)
[»] scaffold0075 (1 HSPs)
scaffold0075 (1-153)||(14586-14739)
[»] scaffold0205 (2 HSPs)
scaffold0205 (12-101)||(21137-21226)
scaffold0205 (140-180)||(21235-21275)
[»] scaffold0020 (2 HSPs)
scaffold0020 (1-101)||(139812-139912)
scaffold0020 (140-185)||(139758-139803)
[»] scaffold0559 (2 HSPs)
scaffold0559 (12-101)||(1373-1462)
scaffold0559 (140-180)||(1324-1364)
[»] scaffold0024 (2 HSPs)
scaffold0024 (12-101)||(141762-141851)
scaffold0024 (140-180)||(141860-141900)
[»] scaffold0007 (2 HSPs)
scaffold0007 (1-101)||(1909-2009)
scaffold0007 (140-186)||(1854-1900)
[»] scaffold0347 (2 HSPs)
scaffold0347 (139-180)||(13700-13741)
scaffold0347 (140-180)||(14562-14602)


Alignment Details
Target: chr7 (Bit Score: 127; Significance: 1e-65; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 2640335 - 2640521
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||    
T  2640335 gcaatcactaccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaatcggaaacccaggggtaaaattggaatttcatg 2640434  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    |||| ||  ||||| || |||||||||||| ||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  2640435 tatggcagggattgccacgtcatcaaattagtgacatgacagtgattaagtggggagagagacgaaattttaaatgattaaacaatg 2640521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 42731690 - 42731499
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||    
T  42731690 gcaatcactcccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaaaaattggaaacccaggggtaaaattggaatttcatg 42731591  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatgtaggg 191  Q
    |||| || ||||||||| |||||||||||| ||| |||  ||||||||||||||||||| |||||||||||||| |||||||||||| ||||    
T  42731590 tatggcagtgattgtcacgtcatcaaattagtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaggg 42731499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 3914409 - 3914223
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  3914409 gcaatcactaccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaatttcatg 3914310  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||||| ||||| ||| |||||||||||| |||| ||  ||||||||||| || |||| |||||||||||||| ||||||||||||    
T  3914309 tatgacagtgattatcacgtcatcaaattagtgatgtggcagtgattaagttggaagagggacgaaattttaaatgattaaacaatg 3914223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 42019754 - 42019940
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    |||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  42019754 gcaatcactaccacacattaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaatttcatg 42019853  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||||| |||||  || |||||||||||| ||| |||  |||||||||||| |||||||||||||||||||||  |||||||||||    
T  42019854 tatgacagtgattaccacgtcatcaaattagtgacatggcagtgattaagtgaggagagagacgaaattttaaataattaaacaatg 42019940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 32053300 - 32053486
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||    
T  32053300 gcaatcactgccacacttgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccagggttaaaattggaatttcatg 32053399  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    | ||||| |||||| || |||||||||||| |||  ||| ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  32053400 tgtgacagtgattgccatgtcatcaaattagtgacgtgacagtgattaagtggggagagggacgaaattttaaatgattaaacaatg 32053486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 48788960 - 48789146
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  48788960 gcaatcactaccacacatgaaattccaattttgcacttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaatttcatg 48789059  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||||| |||| | ||  ||||||||||| ||| |||| | |||| |||||||||||| || ||||||||||| ||||||||||||    
T  48789060 tatgacagtgatcgccacatcatcaaattagtgacatgacaatgatcaagtggggagagggatgaaattttaaatgattaaacaatg 48789146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 10 - 186
Target Start/End: Complemental strand, 10936056 - 10935879
Alignment:
Q  10 accacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgtatgacaat 109  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||| || |    
T  10936056 accacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaatccaggggtaaaattggaatttcatgtatggcagt 10935957  T
Q  110 gattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||| || |||||||||||| ||| |||  ||||||||||||| ||||| |||||||||||||| ||||||||||||    
T  10935956 gattgccacgtcatcaaattagtgacatggcagtgattaagtggagagagggacgaaattttaaatgattaaacaatg 10935879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 28469166 - 28469351
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  |||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||    
T  28469166 gcaatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattgg-aacccaggggtaaaattggaatttcatg 28469264  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    | ||||| |||||| || |||||||||||| |||  || |||||||||||||||||||| |||||||||||||| ||||||||||||    
T  28469265 tgtgacagtgattgccacgtcatcaaattagtgacgtggtagtgattaagtggggagagggacgaaattttaaatgattaaacaatg 28469351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 15 - 185
Target Start/End: Complemental strand, 24389076 - 24388905
Alignment:
Q  15 acatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgtatgacaatgattg 114  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||| | ||||| ||||||    
T  24389076 acatgaaattccaattttgcccttaagaagatgacaaaatattgaagaaagaattggaaacccaggggtaaaattggaatttcatatgtgacagtgattg 24388977  T
Q  115 tcaggtcatcaaatt-atgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaat 185  Q
     || |||||||||||  |||| ||  ||||||||||||||||||| |||||||||||||  |||||||||||    
T  24388976 ccacgtcatcaaattggtgatgtggcagtgattaagtggggagagggacgaaattttaagtgattaaacaat 24388905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 11 - 186
Target Start/End: Original strand, 27396762 - 27396938
Alignment:
Q  11 ccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgtatgacaatg 110  Q
    |||||||| ||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||| | ||||||||||| |||||||||| | ||| ||    
T  27396762 ccacacataaaattccaattctgcccttaagaagatgacaaaatattgaagaaagaattggaaacctaggggtaaaattggaatttcatgtgtaacagtg 27396861  T
Q  111 attgtcaggtcatcaaatt-atgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    |||| || |||||||||||  |||  ||  ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  27396862 attgacacgtcatcaaattcttgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatg 27396938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 11 - 186
Target Start/End: Complemental strand, 45010856 - 45010683
Alignment:
Q  11 ccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgtatgacaatg 110  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| || | || ||||||||||| |||||||||| ||||||||    
T  45010856 ccacacatgaaattccaattttgcctttaagaagaggacaaaatattgaagaaagaattgaaagctcaggggtaaaattggaatttcatgtgtgacaatg 45010757  T
Q  111 attgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    |||| ||   |||||||||| |||  ||  ||||||||||||||||||  |||||||||||||| ||||||||||||    
T  45010756 attgcca---catcaaattagtgacttggcagtgattaagtggggagatggacgaaattttaaatgattaaacaatg 45010683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 49 - 186
Target Start/End: Original strand, 23181199 - 23181337
Alignment:
Q  49 caaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgtatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgatta 147  Q
    |||||||||||||||||||||| |||| || ||||||||||| |||||||||||||||| |||||| || |||||||||||| ||| |||| ||||||||    
T  23181199 caaaatattgaagaaagaattgaaaactcaagggtaaaattggaatttcatgtatgacagtgattgccacgtcatcaaattagtgacatgacagtgatta 23181298  T
Q  148 agtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||| ||||| |||||||||||||| ||||||||||||    
T  23181299 agtggagagagggacgaaattttaaatgattaaacaatg 23181337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 37657121 - 37656937
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  |||||| ||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||| ||| ||||||||||| |||||||||    
T  37657121 gcaatcactgccacacgtgaaattccaattttgcccttaagaagaagacaaaatattgaagaaataattggaaagccaggggtaaaattggaatttcatg 37657022  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
      ||||| | |||| || |||||||||||| |||  ||   |||||||||||||||||| ||||||||||||||  | |||||||||    
T  37657021 --tgacagtaattgccacgtcatcaaattagtgacgtgccggtgattaagtggggagagggacgaaattttaaataaataaacaatg 37656937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 17102260 - 17102160
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  17102260 gcaatcactgccaaacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaatttcatg 17102161  T
Q  101 t 101  Q
    |    
T  17102160 t 17102160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 19204729 - 19204629
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||    
T  19204729 gcaatcactgccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccagggataaaattggaatttcatg 19204630  T
Q  101 t 101  Q
    |    
T  19204629 t 19204629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 101
Target Start/End: Complemental strand, 6571243 - 6571153
Alignment:
Q  11 ccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  6571243 ccacacatgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaatttcatgt 6571153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 32680763 - 32680852
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  32680763 cacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaatttggaatttcatgt 32680852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 39686702 - 39686791
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  39686702 cacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaatttggaatttcatgt 39686791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 22871477 - 22871565
Alignment:
Q  13 acacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||    
T  22871477 acacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaagggtaaaattggaattttatgt 22871565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 30948329 - 30948417
Alignment:
Q  13 acacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  30948329 acacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaatttggaatttcatgt 30948417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 34928818 - 34928907
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||| ||||||||||    
T  34928818 cacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaataattggaaacccaggggtaaatttggaatttcatgt 34928907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 27991979 - 27991879
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| || ||||||||||| |||||||||    
T  27991979 gcaatcactgccaaacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattgaaaactcaggggtaaaattggaatttcatg 27991880  T
Q  101 t 101  Q
    |    
T  27991879 t 27991879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 6253710 - 6253611
Alignment:
Q  2 caatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    |||||||  ||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||    
T  6253710 caatcactgccaaacatgaaattccaattttgcccttaagtagaggacaaaatattgaagaaagaattggaaactcaggggtaaaattggaatttcatgt 6253611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 12 - 173
Target Start/End: Original strand, 13311204 - 13311363
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgtatgacaatga 111  Q
    |||| |||||||| ||||||||  ||||||||| ||| | || || |||||||||||||||||  |||||||||||||| |||||||||| || || |||    
T  13311204 cacatatgaaatttcaattttgtccttaagaaggggaaagaagatggaagaaagaattggaaattcatgggtaaaattggaatttcatgtgtggcagtga 13311303  T
Q  112 ttgtcaggtcatcaaattatgatatgatagtgattaagtggggagagagacgaaattttaaa 173  Q
    |||||| ||||||||||||  || ||  ||||||||||| ||||||| ||||||||||||||    
T  13311304 ttgtcacgtcatcaaatta--atgtggcagtgattaagtcgggagagggacgaaattttaaa 13311363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 40379986 - 40379855
Alignment:
Q  55 attgaagaaagaattggaaacccatgggtaaaattgaaatttcatgtatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggg 153  Q
    |||||||||||||||| ||||||  ||||||||||| |||||||||| ||||| |||||| || |||||||||||| |||  ||  | ||||||||||||    
T  40379986 attgaagaaagaattgaaaaccccggggtaaaattggaatttcatgtgtgacagtgattgccacgtcatcaaattagtgacgtggcattgattaagtggg 40379887  T
Q  154 gagagagacgaaattttaaacgattaaacaat 185  Q
    ||||| |||||||||||||| |||||||||||    
T  40379886 gagagggacgaaattttaaatgattaaacaat 40379855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 32298903 - 32298993
Alignment:
Q  11 ccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||| || ||||| ||||| ||||||||||    
T  32298903 ccacacatgaaattccatttttgcccttaagaagaggacaagatattgaagaaagaattggaaactcaggggtagaattggaatttcatgt 32298993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 45010901 - 45010947
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  45010901 agtgattaagtggggagagagacgaaattttaaatgattaaacaatg 45010947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 191
Target Start/End: Complemental strand, 17102151 - 17102100
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatgtaggg 191  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||| ||||    
T  17102151 agtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaggg 17102100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 191
Target Start/End: Complemental strand, 27991870 - 27991819
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatgtaggg 191  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||| ||||    
T  27991870 agtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaggg 27991819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 34928916 - 34928956
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  34928916 agtgattaagtggggagagggacgaaattttaaacgattaa 34928956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 39686800 - 39686840
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  39686800 agtgattaagtggggagagggacgaaattttaaacgattaa 39686840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 6571144 - 6571098
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||    
T  6571144 agtgattaagtggggagagggacaaaattttaaatgattaaacaatg 6571098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 22871574 - 22871620
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||||||||||||||||| || ||||||||||| ||||||||||||    
T  22871574 agtgattaagtggggagagggaagaaattttaaatgattaaacaatg 22871620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 32299002 - 32299048
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||||||||||||||||| ||||||||||| || ||||||||||||    
T  32299002 agtgattaagtggggagagggacgaaattttcaatgattaaacaatg 32299048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 6253600 - 6253551
Alignment:
Q  142 tgattaagtggggagagagacgaaattttaaacgattaaacaatgtaggg 191  Q
    ||||||||||| ||||| |||||||||||||| |||||||||||| ||||    
T  6253600 tgattaagtggagagagggacgaaattttaaatgattaaacaatgcaggg 6253551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 19204618 - 19204574
Alignment:
Q  142 tgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||||||||||||||| ||| |||||||||| ||||||||||||    
T  19204618 tgattaagtggggagagggacaaaattttaaatgattaaacaatg 19204574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 30948426 - 30948466
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||||||||||||| |||||||||||||| ||||||    
T  30948426 agtgattaagtggggagagggacgaaattttaaatgattaa 30948466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 32680861 - 32680901
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||||||||||||| |||||||||||||| ||||||    
T  32680861 agtgattaagtggggagagggacgaaattttaaatgattaa 32680901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 34928838 - 34928792
Alignment:
Q  84 aaaattgaaatttcatgtatgacaatgattgtcaggtcatcaaatta 130  Q
    ||||||| |||||||||| |||||||||||| || ||||||||||||    
T  34928838 aaaattggaatttcatgtgtgacaatgattgccacgtcatcaaatta 34928792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 181
Target Start/End: Original strand, 11400266 - 11400307
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaa 181  Q
    ||||||||||||||||||||||  |||||||||| |||||||    
T  11400266 agtgattaagtggggagagagaataaattttaaatgattaaa 11400307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 127; Significance: 1e-65; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 37976310 - 37976496
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    |||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  37976310 gcaatcactaccacatatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaatttcatg 37976409  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||||  ||||||||| |||||||||||| ||| |||  ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  37976410 tatgactgtgattgtcacgtcatcaaattagtgacatggcagtgattaagtggggagagtgacgaaattttaaatgattaaacaatg 37976496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 52909524 - 52909338
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  52909524 gcaatcacaaccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattgaaatttcatg 52909425  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    |||| || |||||| ||  ||||||||||| ||| |||  ||||||||||||||||||  |||||||||||||| ||||||||||||    
T  52909424 tatggcagtgattgccacatcatcaaattagtgacatggcagtgattaagtggggagatggacgaaattttaaatgattaaacaatg 52909338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 2 - 186
Target Start/End: Original strand, 54086853 - 54087038
Alignment:
Q  2 caatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||| |||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||| ||| ||||||||||||||||||||||    
T  54086853 caatcactaccacatatgaaattccaattttgcccttaagaagaggataaaatattgaagaaagaattgaaaagccaagggtaaaattgaaatttcatgt 54086952  T
Q  102 atgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    |||||| |||||| || |||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  54086953 atgacagtgattgccacgtcatcaaattagtgacatgttagtgattaagtggggagagagacgaaattttaaatgattaaacaatg 54087038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 34765537 - 34765723
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||    
T  34765537 gcaatcactgccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccagtggtaaaattggaatttcatg 34765636  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    | ||||| |||||| || ||| |||||||| |||  ||  ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  34765637 tgtgacagtgattgccacgtcctcaaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatg 34765723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 2 - 186
Target Start/End: Original strand, 53129664 - 53129849
Alignment:
Q  2 caatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    |||||||  |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||  ||||||||||  ||||||||||    
T  53129664 caatcactgccacacatgaaattccaattttgcccttaagaagatgacaaaatattgaagaaagaattggaaaccccggggtaaaattagaatttcatgt 53129763  T
Q  102 atgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
     ||| | ||||||||| |||||||||||| |||| ||  ||||||||||||||||||| |||||||||||||||||| ||||||||    
T  53129764 gtgatagtgattgtcacgtcatcaaattagtgatgtggcagtgattaagtggggagagggacgaaattttaaacgatgaaacaatg 53129849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 17356082 - 17356265
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  17356082 gcaatcactgccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaatttcatg 17356181  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    | ||||| |||||| ||   |||||||||| |||  ||| ||||||||||||||||||| |||||||||||||| ||| ||||||||    
T  17356182 tgtgacagtgattgcca---catcaaattagtgacgtgacagtgattaagtggggagagggacgaaattttaaatgatcaaacaatg 17356265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 35028155 - 35028341
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||    
T  35028155 gcaatcactgccacacatgaaattccaactttgcccttaagaagaggacaaaatattgaagaaagaattggaaaccctggggtaaaattggaatttcatg 35028254  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    | ||| | |||||| || |||||||||||| |||  ||  ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  35028255 tgtgaaagtgattgccacgtcatcaaattagtgacgtggcagtgattaagtggggagagtgacgaaattttaaatgattaaacaatg 35028341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 35508397 - 35508583
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    |||| ||| ||||||||| ||||||||||||| | ||||||||| ||||||||||||||||||||||||| ||| ||| ||||||||||| |||||||||    
T  35508397 gcaaacactaccacacattaaattccaattttacccttaagaagcggacaaaatattgaagaaagaattgaaaatccaggggtaaaattggaatttcatg 35508496  T
Q  101 tatgacaatgattgtcaggtcatcaaatt-atgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    |||| || |||||| || ||||||||||| |||| |||  |||||||||||||||||||| ||||||||||||| ||||||||||||    
T  35508497 tatggcagtgattgccacgtcatcaaattaatgacatggcagtgattaagtggggagagatacgaaattttaaatgattaaacaatg 35508583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 14802007 - 14801822
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||   | ||||||||||| |||||||||    
T  14802007 gcaatcactgccacacatgaaattccaattttgcccttaagaagagaacaaaatattgaagaaagaattggaaatttaggggtaaaattggaatttcatg 14801908  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaat 185  Q
    | ||||| |||||| || |||||||||||| |||  ||  ||||||||||||||||||| |||||||||||||| |||||||||||    
T  14801907 tgtgacagtgattgccacgtcatcaaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaat 14801822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 12 - 186
Target Start/End: Complemental strand, 53702072 - 53701897
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgtatgacaatga 111  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||| ||||| |||    
T  53702072 cacacatgaaattccaattctgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaataggaatttcatgtgtgacagtga 53701973  T
Q  112 ttgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||  || |||||||||||| |||  ||  ||||||||||||||||||| || ||||||||||| ||||||||||||    
T  53701972 ttaccacgtcatcaaattagtgacgtggcagtgattaagtggggagagggaagaaattttaaatgattaaacaatg 53701897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 15507830 - 15508012
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  ||||| || ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||    
T  15507830 gcaatcactgccacatataaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaactcaggggtaaaattggaatttcatg 15507929  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaac 182  Q
    | ||| | |||||| || |||||||||||| |||   |  |||||||||||||||||||||||||||||||||| ||||||||    
T  15507930 tgtgatagtgattgccacgtcatcaaattagtgacgcggcagtgattaagtggggagagagacgaaattttaaatgattaaac 15508012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 24411629 - 24411443
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  |||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||  || ||||||||||| |||||||||    
T  24411629 gcaatcactgccacccatgaaattccaattttgcccttaagaagatgacaaaatattgaagaaagaattggaaattcaggggtaaaattggaatttcatg 24411530  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    | ||||| |||||| || |||||||||||| |||  ||  |||||||||||||| |||| ||||||  |||||| ||||||||||||    
T  24411529 tgtgacagtgattgccacgtcatcaaattagtgacgtgggagtgattaagtgggaagagggacgaatctttaaatgattaaacaatg 24411443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 49879364 - 49879464
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  49879364 gcaatcactgccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaatttcatg 49879463  T
Q  101 t 101  Q
    |    
T  49879464 t 49879464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 112
Target Start/End: Complemental strand, 51692779 - 51692679
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgtatgacaatga 111  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||    
T  51692779 cacacatgaaattctaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaatccatgggtaaaattggaatttcatgtatgacagtga 51692680  T
Q  112 t 112  Q
    |    
T  51692679 t 51692679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 27934761 - 27934672
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  27934761 cacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaatttcatgt 27934672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 13058261 - 13058177
Alignment:
Q  17 atgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  13058261 atgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattgaaatttcatgt 13058177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 24711351 - 24711251
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  24711351 gcaatcactgccacacatgaaattccaattttgcccttaagaagatgacaaaatattgaagaaagaattggaaacccaggggtaaaattggaatttcatg 24711252  T
Q  101 t 101  Q
    |    
T  24711251 t 24711251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 44967226 - 44967326
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  44967226 gcaatcactgccaaacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaatttcatg 44967325  T
Q  101 t 101  Q
    |    
T  44967326 t 44967326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 34837242 - 34837331
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  34837242 cacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaatttggaatttcatgt 34837331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 38012399 - 38012310
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  38012399 cacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaatttggaatttcatgt 38012310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 7452074 - 7451974
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||    
T  7452074 gcaatcactgccaaacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaactcaggggtaaaattggaatttcatg 7451975  T
Q  101 t 101  Q
    |    
T  7451974 t 7451974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 37248476 - 37248376
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||||||  |||||||||    
T  37248476 gcaatcactgccacacatgaaattccaattttgcccttaagaagaggacaaaataatgaagaaagaattggaaacccaggggtaaaattagaatttcatg 37248377  T
Q  101 t 101  Q
    |    
T  37248376 t 37248376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 50418826 - 50418925
Alignment:
Q  2 caatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    |||||||  |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||    
T  50418826 caatcactgccacacatgaaattccaattttgcccttaaggagaggacaaaatattgaagaaagaattggaatcccaagggtaaaattggaatttcatgt 50418925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 16006078 - 16005980
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcat 99  Q
    ||||||||  ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||    
T  16006078 gcaatcactgccaaacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaatccaggggtaaaattggaatttcat 16005980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 46661185 - 46661071
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    |||||||| ||||||||||||||||||||||||| |||||||| || |||||||||| |||||||||||||||||||| ||||||| ||| | |||||||    
T  46661185 gcaatcactaccacacatgaaattccaattttgcccttaagaatagaacaaaatattaaagaaagaattggaaacccaggggtaaatttggagtttcatg 46661086  T
Q  101 tatgacaatgattgt 115  Q
    |||| || |||||||    
T  46661085 tatggcagtgattgt 46661071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 4982894 - 4982983
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||| ||| ||||||||||    
T  4982894 cacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattagaaacccaggggtaaatttggaatttcatgt 4982983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 9144934 - 9145023
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  9144934 cacacatgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaatttggaatttcatgt 9145023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 9400687 - 9400776
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  9400687 cacagatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaatttgtaatttcatgt 9400776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 22567028 - 22566939
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  22567028 cacacatgaaattccaattttgcccttaagaaaaggacaaaatattgaagaaagaattggaaacccaggggtaaatttggaatttcatgt 22566939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 33247441 - 33247530
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  33247441 cacagatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaatttgtaatttcatgt 33247530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 42738199 - 42738288
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||| ||||||||||    
T  42738199 cacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaatccaagggtaaatttggaatttcatgt 42738288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 18831588 - 18831489
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||| |||    
T  18831588 gcaatcactgccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattgg-aacccaggggtaaaattggaattttatg 18831490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 36009001 - 36009101
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||  || ||||||||||| |||||||||    
T  36009001 gcaatcactgccaaacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattgaaaaatcaggggtaaaattggaatttcatg 36009100  T
Q  101 t 101  Q
    |    
T  36009101 t 36009101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 23613548 - 23613449
Alignment:
Q  2 caatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    |||||||  ||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||| ||||||||||    
T  23613548 caatcactgccaaacatgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaatccaggggtaaatttggaatttcatgt 23613449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 32950371 - 32950282
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||| ||||| ||||||||| ||||||||||||||||||| ||||||||||||||| ||||||| ||||||| ||| ||||||||||    
T  32950371 cacacataaaattacaattttgcccttaagaagaggacaaaatgttgaagaaagaattgaaaacccaggggtaaatttggaatttcatgt 32950282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 43155686 - 43155784
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  ||| |||||||||| ||||||||| ||||||||||||||||  ||||||||||||||||||||||||| ||||||||||| ||||| |||    
T  43155686 gcaatcactgccaaacatgaaatttcaattttgcccttaagaagaggacaa--tattgaagaaagaattggaaacccaggggtaaaattggaattttatg 43155783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 5369178 - 5369087
Alignment:
Q  10 accacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    |||| |||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||| | | ||||||||| ||||||||||    
T  5369178 accaaacataaaattccaattttgcccttaagaagaggacaaaatattgaagaaaaaattgaaaacctaggagtaaaattggaatttcatgt 5369087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 18831480 - 18831434
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  18831480 agtgattaagtggggagagagacgaaattttaaatgattaaacaatg 18831434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 38012301 - 38012261
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  38012301 agtgattaagtggggagagagacgaaattttaaacgattaa 38012261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 191
Target Start/End: Complemental strand, 13058168 - 13058117
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatgtaggg 191  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||| ||||    
T  13058168 agtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaggg 13058117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 191
Target Start/End: Complemental strand, 23613440 - 23613389
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatgtaggg 191  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||| ||||    
T  23613440 agtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaggg 23613389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 186
Target Start/End: Complemental strand, 24711243 - 24711196
Alignment:
Q  139 tagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||    
T  24711243 tagtgattaagtggggagagggacgaaattttaaatgattaaacaatg 24711196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 191
Target Start/End: Original strand, 36009110 - 36009161
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatgtaggg 191  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||| ||||    
T  36009110 agtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaggg 36009161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 191
Target Start/End: Original strand, 44967335 - 44967386
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatgtaggg 191  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||| ||||    
T  44967335 agtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaggg 44967386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 37248367 - 37248321
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  37248367 agtgattaagtggggagagcgacgaaattttaaatgattaaacaatg 37248321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 49879473 - 49879519
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  49879473 agtgattaagtggggagagggacgaaattttaaatgattaaacaatg 49879519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 50418934 - 50418980
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  50418934 agtgattaagtggggagagggacgaaattttaaatgattaaacaatg 50418980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 193
Target Start/End: Original strand, 43155793 - 43155846
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatgtagggat 193  Q
    ||||||||||||||||||| |||||||||||||| ||||||| |||| ||||||    
T  43155793 agtgattaagtggggagagggacgaaattttaaatgattaaataatgcagggat 43155846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 52298157 - 52298116
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaa 181  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  52298157 agtgattaagtggggagagagacgaaattttaaatgattaaa 52298116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 32950273 - 32950233
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  32950273 agtgattaagtggggagagagacgaaattttaaatgattaa 32950233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 34837340 - 34837380
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  34837340 agtgattaagtggggagagggacgaaattttaaacgattaa 34837380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 191
Target Start/End: Complemental strand, 5369078 - 5369027
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatgtaggg 191  Q
    ||||||||||||||||||| ||| |||||||||| |||||||||||| ||||    
T  5369078 agtgattaagtggggagagggacaaaattttaaatgattaaacaatgcaggg 5369027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 185
Target Start/End: Complemental strand, 16005969 - 16005924
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaat 185  Q
    ||||||||||| ||||||| |||||||||||||| |||||||||||    
T  16005969 agtgattaagtagggagagggacgaaattttaaatgattaaacaat 16005924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 4982992 - 4983032
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||||||||||||| |||||||||||||| ||||||    
T  4982992 agtgattaagtggggagagggacgaaattttaaatgattaa 4983032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 9145032 - 9145072
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||||||||||||| |||||||||||||| ||||||    
T  9145032 agtgattaagtggggagagggacgaaattttaaatgattaa 9145072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 27934663 - 27934623
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||||||||||||| |||||||||||||| ||||||    
T  27934663 agtgattaagtggggagagggacgaaattttaaatgattaa 27934623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 42738297 - 42738337
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||||||||||||| |||||||||||||| ||||||    
T  42738297 agtgattaagtggggagagggacgaaattttaaatgattaa 42738337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 186
Target Start/End: Complemental strand, 51692690 - 51692638
Alignment:
Q  134 tatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||| |||||| |||||||||||| |||||||||||||  ||||||||||||    
T  51692690 tatgacagtgatcaagtggggagagggacgaaattttaagtgattaaacaatg 51692638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 150
Target Start/End: Original strand, 23613518 - 23613585
Alignment:
Q  84 aaaattgaaatttcatgtatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagt 150  Q
    |||||||||||||||||| || || ||||||||| |||||||||||| |||  || ||||||||||||    
T  23613518 aaaattgaaatttcatgtttggcagtgattgtcacgtcatcaaattagtgacgtggtagtgattaagt 23613585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 9144954 - 9144908
Alignment:
Q  84 aaaattgaaatttcatgtatgacaatgattgtcaggtcatcaaatta 130  Q
    |||||||||||||||||| ||||| |||||| || ||||||||||||    
T  9144954 aaaattgaaatttcatgtgtgacagtgattgccacgtcatcaaatta 9144908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 16605733 - 16605687
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||||||||||||| ||| |||||||||||||| |||||| |||||    
T  16605733 agtgattaagtggggggagggacgaaattttaaatgattaatcaatg 16605687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 9400785 - 9400825
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||||||||||||| || ||||||||||| ||||||    
T  9400785 agtgattaagtggggagagggatgaaattttaaatgattaa 9400825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 22566930 - 22566890
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||||||||||||| || ||||||||||| ||||||    
T  22566930 agtgattaagtggggagagggatgaaattttaaatgattaa 22566890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 24349805 - 24349765
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||| ||||||||| |||||||||||||| ||||||    
T  24349805 agtgattaactggggagagggacgaaattttaaatgattaa 24349765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 33247539 - 33247579
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||||||||||||| || ||||||||||| ||||||    
T  33247539 agtgattaagtggggagagggatgaaattttaaatgattaa 33247579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 126; Significance: 5e-65; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 12 - 188
Target Start/End: Complemental strand, 36755353 - 36755176
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgtatgacaatga 111  Q
    ||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||    
T  36755353 cacacatgaaattccaatttctcccttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattggaatttcatgtgtgacagtga 36755254  T
Q  112 ttgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatgta 188  Q
    |||||| |||||||||||| |||  ||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  36755253 ttgtcacgtcatcaaattagtgacgtgacagtgattaagtggggagagagacgaaattttaaatgattaaacaatgta 36755176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 37895504 - 37895690
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  37895504 gcaatcactgccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggagtaaaattgaaatttcatg 37895603  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    | ||||| ||||||||| |||||||||||| |||  ||  ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  37895604 tgtgacagtgattgtcacgtcatcaaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatg 37895690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 11 - 186
Target Start/End: Original strand, 44713928 - 44714104
Alignment:
Q  11 ccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgtatgacaatg 110  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||| ||||||||    
T  44713928 ccacacgtgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaactcaggggtaaaattggaatttcatgtgtgacaatg 44714027  T
Q  111 attgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||||| |||||||||||| ||| |||  ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  44714028 attgtcacgtcatcaaattagtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatg 44714104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 2 - 186
Target Start/End: Complemental strand, 2318428 - 2318243
Alignment:
Q  2 caatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  2318428 caatcactaccacacatgaaattccaattttgcccttaagaagaggacacaatattgaagaaagaattggaaacccaggggtaaaattggaatttcatgt 2318329  T
Q  102 atgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
     ||||| ||||||||| |||||||||||| |||  ||  | | ||||||||||||||| |||||||||||||| ||||||||||||    
T  2318328 gtgacagtgattgtcacgtcatcaaattagtgacgtggcattaattaagtggggagagggacgaaattttaaatgattaaacaatg 2318243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 39423786 - 39423601
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  |||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||| || |||||||| |||||||||    
T  39423786 gcaatcactcccacacatgaaattccaattttgcccttaagaagatgacaaaatattgaagaaaaaattggaaacccagggataaaattggaatttcatg 39423687  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaat 185  Q
    ||||||| |||||| || |||||||||||| ||| |||  ||||||||||||||||||| |||||||||||||| |||||||||||    
T  39423686 tatgacagtgattgccacgtcatcaaattagtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaaacaat 39423601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 11 - 186
Target Start/End: Complemental strand, 36382422 - 36382246
Alignment:
Q  11 ccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgtatgacaatg 110  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||| ||    
T  36382422 ccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattggaattttatgtctgacagtg 36382323  T
Q  111 attgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    |||| || |||||||||||| |||  ||  ||||||||||||||||||| || ||||||||||| ||||||||||||    
T  36382322 attgccacgtcatcaaattagtgacgtggcagtgattaagtggggagagggatgaaattttaaatgattaaacaatg 36382246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 15848359 - 15848173
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  15848359 gcaatcactgccacacgtgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaatttcatg 15848260  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    | ||||| |||||| ||  ||||||||||| |||  ||  ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  15848259 tgtgacagtgattgccacatcatcaaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatg 15848173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 22051151 - 22051336
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    |||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||     
T  22051151 gcaatcactatcacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaactcaggggtaaaattgaaacttcata 22051250  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||  | ||||||||| |||||||||||| |||||||  |||||||| || |||||||||||||||||||||| ||||||||||||    
T  22051251 tatggtagtgattgtcacgtcatcaaattagtgatatggcagtgattaggt-gggagagagacgaaattttaaatgattaaacaatg 22051336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 36479989 - 36479803
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    |||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| || ||||||||||| | |||||||    
T  36479989 gcaatcactaccacgcatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattgaaaactcaggggtaaaattggagtttcatg 36479890  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||||| | ||||||| |||||||||||| ||| |||  ||||||||||||||||||  |||||||||||||| ||||||||||||    
T  36479889 tatgacagttattgtcacgtcatcaaattagtgacatggcagtgattaagtggggagatggacgaaattttaaatgattaaacaatg 36479803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 13 - 186
Target Start/End: Complemental strand, 10712982 - 10712808
Alignment:
Q  13 acacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgtatgacaatgat 112  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| | ||||||||||| ||||| |||| ||||| ||||    
T  10712982 acacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaatcggaaacctaggggtaaaattggaattttatgtgtgacagtgat 10712883  T
Q  113 tgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    || || |||||||||||| |||  || |||||||||||||||||||| || ||||||||||| ||||||||||||    
T  10712882 tgccacgtcatcaaattagtgacgtggtagtgattaagtggggagagggatgaaattttaaatgattaaacaatg 10712808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 16099295 - 16099195
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  16099295 gcaatcaccgccaaacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaatttcatg 16099196  T
Q  101 t 101  Q
    |    
T  16099195 t 16099195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 1695908 - 1695997
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  1695908 cacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaatttggaatttcatgt 1695997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 13995841 - 13995930
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  13995841 cacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaatttggaatttcatgt 13995930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 14900651 - 14900740
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  14900651 cacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaatttggaatttcatgt 14900740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 33062218 - 33062307
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  33062218 cacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaatttggaatttcatgt 33062307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 41248727 - 41248816
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  41248727 cacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaagggtaaatttggaatttcatgt 41248816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 6658118 - 6658018
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||    
T  6658118 gcaatcactgccaaacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacctaggggtaaaattggaatttcatg 6658019  T
Q  101 t 101  Q
    |    
T  6658018 t 6658018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 39498550 - 39498450
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||    
T  39498550 gcaatcactgccaaacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaattttatg 39498451  T
Q  101 t 101  Q
    |    
T  39498450 t 39498450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 11163225 - 11163307
Alignment:
Q  15 acatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttc 97  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||    
T  11163225 acatgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaactcaggggtaaaattggaatttc 11163307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 45556338 - 45556252
Alignment:
Q  15 acatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    |||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||| || ||||||||||| ||||||||||    
T  45556338 acatgaaattccaattttgtccttaagaagatgacaaaatattgaagaaagaattggaaactcaggggtaaaattggaatttcatgt 45556252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 33739932 - 33739843
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||| || |||| ||| ||||||||||    
T  33739932 cacacatgaaattacaattttgcccttaagaagaggacaaaatattgatgaaagaattggaaacccagggataaatttggaatttcatgt 33739843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 61 - 186
Target Start/End: Complemental strand, 34448023 - 34447898
Alignment:
Q  61 gaaagaattggaaacccatgggtaaaattgaaatttcatgtatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagaga 159  Q
    |||||||||||||| ||   |||||||||| |||||||||| ||||| ||||||||| |||||||||||| |||| ||  ||||||||||||||||||||    
T  34448023 gaaagaattggaaatcccgaggtaaaattggaatttcatgtgtgacagtgattgtcacgtcatcaaattagtgatgtggcagtgattaagtggggagaga 34447924  T
Q  160 gacgaaattttaaacgattaaacaatg 186  Q
    ||||||| ||||||  |||||||||||    
T  34447923 gacgaaa-tttaaattattaaacaatg 34447898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 113
Target Start/End: Original strand, 17266532 - 17266633
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgtatgacaatga 111  Q
    ||||||||| ||||||||||||| ||||||||||||| | || || ||||||| ||||||||||| | | ||||||||||||||| ||||  ||||||||    
T  17266532 cacacatgatattccaattttgcccttaagaagaggaaagaagatggaagaaaaaattggaaacctaggagtaaaattgaaattttatgtgcgacaatga 17266631  T
Q  112 tt 113  Q
    ||    
T  17266632 tt 17266633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 191
Target Start/End: Complemental strand, 39498441 - 39498390
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatgtaggg 191  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  39498441 agtgattaagtggggagagggacgaaattttaaatgattaaacaatgtaggg 39498390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 191
Target Start/End: Complemental strand, 6658009 - 6657958
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatgtaggg 191  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||| ||||    
T  6658009 agtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaggg 6657958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 191
Target Start/End: Complemental strand, 16099186 - 16099135
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatgtaggg 191  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||| ||||    
T  16099186 agtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaggg 16099135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 11163320 - 11163366
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  11163320 agtgattaagtggggagagggacgaaattttaaatgattaaacaatg 11163366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 1696006 - 1696046
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  1696006 agtgattaagtggggagagggacgaaattttaaacgattaa 1696046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 13995939 - 13995979
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  13995939 agtgattaagtggggagagggacgaaattttaaacgattaa 13995979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 41248825 - 41248865
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  41248825 agtgattaagtggggagagggacgaaattttaaacgattaa 41248865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 181
Target Start/End: Original strand, 11721387 - 11721428
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaa 181  Q
    |||||||||||||||||||||||||||||||||  |||||||    
T  11721387 agtgattaagtggggagagagacgaaattttaagtgattaaa 11721428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 193
Target Start/End: Complemental strand, 45556243 - 45556190
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatgtagggat 193  Q
    ||||||||||| ||||||| ||| |||||||||| |||||||||||| ||||||    
T  45556243 agtgattaagtagggagagggacaaaattttaaatgattaaacaatgcagggat 45556190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 14900749 - 14900789
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||||||||||||| |||||||||||||| ||||||    
T  14900749 agtgattaagtggggagagggacgaaattttaaatgattaa 14900789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 33739834 - 33739794
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||||||||||||| |||||||||||||| ||||||    
T  33739834 agtgattaagtggggagagggacgaaattttaaatgattaa 33739794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 186
Target Start/End: Complemental strand, 25892526 - 25892479
Alignment:
Q  139 tagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    |||| ||||||||||||||| |||||| ||||||| ||||||||||||    
T  25892526 tagtaattaagtggggagagggacgaatttttaaatgattaaacaatg 25892479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 6573177 - 6573131
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    |||||||||| |||||||| |||||| ||||||| ||||||||||||    
T  6573177 agtgattaaggggggagagggacgaatttttaaatgattaaacaatg 6573131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 11163242 - 11163196
Alignment:
Q  84 aaaattgaaatttcatgtatgacaatgattgtcaggtcatcaaatta 130  Q
    |||||||||||||||||| ||||| |||||| || ||||||||||||    
T  11163242 aaaattgaaatttcatgtttgacagtgattgccacgtcatcaaatta 11163196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 25893515 - 25893561
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    |||||||||| ||||||||| ||||| ||||||| ||||||||||||    
T  25893515 agtgattaaggggggagagaaacgaatttttaaatgattaaacaatg 25893561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 17266529 - 17266488
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaa 181  Q
    ||||||||||||||||||| ||| |||||||||| |||||||    
T  17266529 agtgattaagtggggagagggaccaaattttaaatgattaaa 17266488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 33062316 - 33062356
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||||||||||||| ||||||||| |||| ||||||    
T  33062316 agtgattaagtggggagagggacgaaattataaatgattaa 33062356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 125; Significance: 2e-64; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 30804132 - 30803944
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    |||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  30804132 gcaatcactaccacacatgaaattccaattttacccttaagaagaggacaaaatattgaagaaagaattgaaaacccaagggtaaaattgaaatttcatg 30804033  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatgta 188  Q
    |||| || |||||| || |||||||||||| ||| |||  ||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  30804032 tatggcagtgattgccacgtcatcaaattagtgagatggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgta 30803944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 30726030 - 30725847
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  30726030 gcaatcactaccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaatttcatg 30725931  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaaca 183  Q
    |||| || |||||| || |||||||||||| ||| |||  ||||||||| ||||||||| |||||||||||||| |||||||||    
T  30725930 tatggcagtgattgccacgtcatcaaattagtgacatggcagtgattaaatggggagagggacgaaattttaaatgattaaaca 30725847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 2 - 191
Target Start/End: Complemental strand, 12080906 - 12080716
Alignment:
Q  2 caatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||| |    
T  12080906 caatcactaccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacacaggggtaaaattggaatttcatat 12080807  T
Q  102 atgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatgtaggg 191  Q
    |||||| |||||| ||  ||||||||||| ||| |||  ||||||||||||||||||| |||||||||||||| |||||||||||| ||||    
T  12080806 atgacagtgattgccacatcatcaaattagtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaggg 12080716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 12 - 186
Target Start/End: Complemental strand, 33517794 - 33517619
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgtatgacaatga 111  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  33517794 cacacatgaaatttcaattttgcccttaagaagaggacaaaatattgaagacagaattggaaacccaggggtaaaattgaaatttcatgtatgacaatga 33517695  T
Q  112 ttgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||| || |||||||||||| |||  |   ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  33517694 ttgccacgtcatcaaattagtgacgtagcagtgattaagtggggagagggacgaaattttaaatgattaaacaatg 33517619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 11 - 186
Target Start/End: Complemental strand, 11393099 - 11392923
Alignment:
Q  11 ccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgtatgacaatg 110  Q
    |||||| ||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||| ||    
T  11393099 ccacacgtgaaattccaattttgcccttaagaagatggcaaaatattgaagaaagaattggaaacccaggggtaaaattggaatttcatgtgtgacagtg 11393000  T
Q  111 attgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||||| |||||||||||| ||| |||  ||||||||||| |||||| ||||||||||||||| ||||||||||||    
T  11392999 attgtcacgtcatcaaattagtgacatggcagtgattaagttgggagatagacgaaattttaaatgattaaacaatg 11392923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 12 - 186
Target Start/End: Original strand, 21627881 - 21628056
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgtatgacaatga 111  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||| || || |||    
T  21627881 cacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccgggggtaaaattggaatttcatgtgtggcagtga 21627980  T
Q  112 ttgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||| || |||||||||||| |||  ||  ||||||||||||||||||| ||| |||||||||| ||||||||||||    
T  21627981 ttgccacgtcatcaaattagtgacgtggcagtgattaagtggggagagggacaaaattttaaatgattaaacaatg 21628056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 2 - 186
Target Start/End: Complemental strand, 3059526 - 3059342
Alignment:
Q  2 caatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    |||||||  |||||| ||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||| | ||||||||||| ||||||||||    
T  3059526 caatcactgccacacgtgaaattccaattttgcccttaagaagtggacaaa-tattgaagaaagaattggaaacctaggggtaaaattggaatttcatgt 3059428  T
Q  102 atgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
     |||||||||||| || ||||||| |||| ||| |||  |||||||||||| |||||| |||||||||||||| ||||||||||||    
T  3059427 gtgacaatgattgccacgtcatcacattagtgacatggcagtgattaagtgaggagagggacgaaattttaaatgattaaacaatg 3059342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 30337689 - 30337589
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| || ||||||||||| |||||||||    
T  30337689 gcaatcactgccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattgaaaactcaggggtaaaattggaatttcatg 30337590  T
Q  101 t 101  Q
    |    
T  30337589 t 30337589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 14196783 - 14196872
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||| ||| ||||||||||    
T  14196783 cacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattgggaacccaggggtaaatttggaatttcatgt 14196872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 25486097 - 25486185
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  25486097 cacacatgaaattccaattttgctcttaagaaggggacaaaatattgaagaaagaattggaaaccca-gggtaaatttggaatttcatgt 25486185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 28000553 - 28000642
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  28000553 cacacatgaaattccaattttgcccttaagaagatgacaaaatattgaagaaagaattggaaacccaggggtaaatttggaatttcatgt 28000642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 33647222 - 33647048
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    |||||||| ||||||| ||||||||||||||||| ||||||||||||||||||            |||||||||| || ||||||||||| |||||||||    
T  33647222 gcaatcactaccacacgtgaaattccaattttgcccttaagaagaggacaaaa------------aattggaaacacaggggtaaaattggaatttcatg 33647135  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    | ||||| |||||| || |||||||||||| |||  ||  ||||||||| |||||||||||||||||||||||| ||||||| ||||    
T  33647134 tgtgacagtgattgccacgtcatcaaattagtgacgtggcagtgattaaatggggagagagacgaaattttaaatgattaaataatg 33647048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 17734363 - 17734451
Alignment:
Q  11 ccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    |||||||||||||| ||||||||| |||||  ||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||    
T  17734363 ccacacatgaaattacaattttgcccttaa--agaggacaaaatattgaagaaagaattggaaactcaggggtaaaattggaatttcatgt 17734451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 363096 - 363136
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  363096 agtgattaagtggggagagggacgaaattttaaacgattaa 363136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 17734460 - 17734506
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||    
T  17734460 agtgattaagtggggagagggacaaaattttaaatgattaaacaatg 17734506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 30337580 - 30337534
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||||||||||||||||| |||||||||||||| |||||| |||||    
T  30337580 agtgattaagtggggagagggacgaaattttaaatgattaaccaatg 30337534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 28000651 - 28000691
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||||||||||||| |||||||||||||| ||||||    
T  28000651 agtgattaagtggggagagggacgaaattttaaatgattaa 28000691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 363058 - 363012
Alignment:
Q  84 aaaattgaaatttcatgtatgacaatgattgtcaggtcatcaaatta 130  Q
    ||||||| |||||||||| ||||| ||||||||| ||||||||||||    
T  363058 aaaattggaatttcatgtgtgacagtgattgtcacgtcatcaaatta 363012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 21627901 - 21627855
Alignment:
Q  84 aaaattgaaatttcatgtatgacaatgattgtcaggtcatcaaatta 130  Q
    ||||||| |||||||||| ||||| ||||||||| ||||||||||||    
T  21627901 aaaattggaatttcatgtgtgacagtgattgtcacgtcatcaaatta 21627855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 14196881 - 14196921
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||||||||||||| | |||||||||||| ||||||    
T  14196881 agtgattaagtggggagaggggcgaaattttaaatgattaa 14196921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 124; Significance: 7e-64; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 34464606 - 34464789
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||    
T  34464606 gcaatcactaccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaaaccaggggtaaaattggaatttcatg 34464705  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaaca 183  Q
    ||||||| ||||||||| |||||||||||| ||| |||  ||||||||||||||||||| ||| |||||||||| |||||||||    
T  34464706 tatgacagtgattgtcacgtcatcaaattagtgacatggcagtgattaagtggggagagggacaaaattttaaatgattaaaca 34464789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 37578349 - 37578537
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  37578349 gcaatcactaccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaatttcatg 37578448  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatgta 188  Q
    | ||||| |||||| || |||||||||||| |||  ||  ||||||||||||||||||| |||||||||||||| |||||| |||||||    
T  37578449 tgtgacagtgattgccacgtcatcaaattagtgacgtggcagtgattaagtggggagagtgacgaaattttaaatgattaatcaatgta 37578537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 2 - 188
Target Start/End: Complemental strand, 1841729 - 1841542
Alignment:
Q  2 caatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |    
T  1841729 caatcactaccacacatgaaattcaaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaatttcatat 1841630  T
Q  102 atgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatgta 188  Q
    ||| || |||||||||  ||||||||||| ||| |||  ||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  1841629 atggcagtgattgtcacatcatcaaattagtgacatggcagtgattaagtggggagagtgacgaaattttaaatgattaaacaatgta 1841542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 1103732 - 1103546
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    |||||||| ||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||    
T  1103732 gcaatcactaccactcatgaaattccaattttacccttaagaagaggacaaaatattgaagaaagaattgaaaacccaggggtaaaattggaatttcatg 1103633  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||||| |||||| ||  ||||||||||| ||| |||| ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  1103632 tatgacagtgattgccacatcatcaaattagtgacatgacagtgattaagtggggagagggacgaaattttaaatgattaaacaatg 1103546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 14879242 - 14879056
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    |||||||| ||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  14879242 gcaatcactaccacacatgaaactccaattttgcccttaagaagatgacaaaatattgaagaaagaattggaaacccaggggtaaaattggaatttcatg 14879143  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    |||  || |||||| || |||||||||||| ||| |||| ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  14879142 tatctcagtgattgccacgtcatcaaattagtgacatgacagtgattaagtggggagagggacgaaattttaaatgattaaacaatg 14879056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 35152614 - 35152426
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||    
T  35152614 gcaatcactaccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattgaaaacccaggggtaaaattggaatttcatg 35152515  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatgta 188  Q
    ||||  | ||||||||| |||||||||||| ||| ||   ||||||||||||||||||| ||| |||||||||| ||||||||||||||    
T  35152514 tatggtagtgattgtcacgtcatcaaattagtgacattgcagtgattaagtggggagagggacaaaattttaaatgattaaacaatgta 35152426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 6367833 - 6367647
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||    
T  6367833 gcaatcactgccacacatgaaattccaatttttcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggagtttcatg 6367734  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    | ||||| ||||||||| |||||||||||| |||  ||  ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  6367733 tgtgacagtgattgtcacgtcatcaaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatg 6367647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 43759093 - 43758907
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||    
T  43759093 gcaatcactgccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattagaatttcatg 43758994  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    | ||||| |||||| || |||||||||||| ||| |||  ||||||||||||| ||||| |||||||||||||| ||||||||||||    
T  43758993 tgtgacagtgattgccacgtcatcaaattagtgacatggcagtgattaagtggagagagggacgaaattttaaatgattaaacaatg 43758907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 30711598 - 30711412
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    |||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||    
T  30711598 gcaatcgctaccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaactcaggggtaaaattggaatttcatg 30711499  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    |||| || |||||| || ||| |||||||| ||| |||  ||||||||||||||| ||| |||||||||||||| ||||||||||||    
T  30711498 tatggcagtgattgccacgtcgtcaaattagtgacatggcagtgattaagtggggcgagggacgaaattttaaatgattaaacaatg 30711412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 18 - 186
Target Start/End: Original strand, 24009715 - 24009884
Alignment:
Q  18 tgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgtatgacaatgattgtca 117  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||  |||| |||||| ||    
T  24009715 tgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaagggtaaaattggaatttcatgtgcgacagtgattgcca 24009814  T
Q  118 ggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
     |||||||||||| |||| ||  ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  24009815 cgtcatcaaattagtgatgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatg 24009884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 12 - 186
Target Start/End: Complemental strand, 41098993 - 41098818
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgtatgacaatga 111  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| | ||||| |||    
T  41098993 cacacgtgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaagcccatgggtaaaattggaatttcatatgtgacagtga 41098894  T
Q  112 ttgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||| || |||||||||||| |||| || |||||||||||||||||| | ||| |||||||||| ||||||||||||    
T  41098893 ttgccacgtcatcaaattagtgatgtggtagtgattaagtggggagggggacaaaattttaaatgattaaacaatg 41098818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 17662007 - 17662193
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    |||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||    
T  17662007 gcaatcactatcacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattgaaaacccaggggtaaaattggaatttcatg 17662106  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    |||| || |||||| ||  ||||||||||| |||  ||  |||||||||||||| |||| |||||||||||||| ||||||||||||    
T  17662107 tatgtcagtgattgccacttcatcaaattagtgacgtggcagtgattaagtgggaagagggacgaaattttaaatgattaaacaatg 17662193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 12 - 185
Target Start/End: Original strand, 13914236 - 13914409
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgtatgacaatga 111  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||| |||    
T  13914236 cacacatgaaattccaattttacccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaatttcatgtgtgacagtga 13914335  T
Q  112 ttgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaat 185  Q
    ||| || |||||||||||| |||  ||  ||||||| ||||||||||| |||||||||||||| |||||||||||    
T  13914336 ttg-cacgtcatcaaattagtgacgtggcagtgatttagtggggagagggacgaaattttaaatgattaaacaat 13914409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 26 - 186
Target Start/End: Complemental strand, 46163276 - 46163115
Alignment:
Q  26 caattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgtatgacaatgattgtcaggtcatca 125  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||| || | |||| || |||||||    
T  46163276 caattttgcctttaagaagaggacaaaatattgaagaaagaattggaaacccataggcaaaattggaatttcatgtatggcagtaattgccacgtcatca 46163177  T
Q  126 aatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||| ||| |||| ||| |||||||||||||||||||||||||||||| ||||||||||||    
T  46163176 aattagtgacatgacagtaattaagtggggagagagacgaaattttaaatgattaaacaatg 46163115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 48779390 - 48779202
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgg--gtaaaattgaaatttca 98  Q
    |||||||| ||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||| ||||||| | ||  ||||||||| |||||||    
T  48779390 gcaatcactaccacacatgaaattccaattttgcccttaagaagatgacaaaatgttgaagaaagaatgggaaacctaggggtgtaaaattggaatttca 48779291  T
Q  99 tgtatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||||||| ||||||||| |||||||||||| ||| |||  |||||||||||||||||||  | | ||||||||| ||||||||||||    
T  48779290 tgtatgacagtgattgtcacgtcatcaaattagtgacatggcagtgattaagtggggagaggaaaggaattttaaatgattaaacaatg 48779202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 32917531 - 32917345
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  ||||| |||||||||||||||| | ||||| || |||||||||||||||||||||||||||||||||| || |||||||| ||| |||||    
T  32917531 gcaatcactgccacatatgaaattccaattttacccttaaaaataggacaaaatattgaagaaagaattggaaacccaaggataaaattggaatgtcatg 32917432  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    | ||||| | |||| || ||| |||||||| |||| ||  |||||||||||||||||||||||||||||||||| ||||||||||||    
T  32917431 tgtgacagtaattgccacgtcgtcaaattagtgatgtggcagtgattaagtggggagagagacgaaattttaaatgattaaacaatg 32917345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 42248744 - 42248558
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    |||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||| | ||||||||||| ||||||||||| |||||||||    
T  42248744 gcaatcactaccacacatgaaattccaattttgcccttaagaagatgacaaaatattgaagaaatatttggaaacccacgggtaaaattggaatttcatg 42248645  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||  | |||||| ||  ||| ||||||| | |  ||  ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  42248644 tatggtagtgattgccacatcaacaaattagtcacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatg 42248558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 18 - 186
Target Start/End: Original strand, 40210544 - 40210713
Alignment:
Q  18 tgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgtatgacaatgattgtca 117  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||| |||| ||||||||||| |||||||||| ||||| |||||| ||    
T  40210544 tgaaattccaattttgcccttaagaagagaacaaaatattgaagaaaaaattggaagcccaggggtaaaattggaatttcatgtgtgacagtgattgcca 40210643  T
Q  118 ggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
     |||||||| ||| |||  ||  ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  40210644 cgtcatcaatttagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatg 40210713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 36694439 - 36694551
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    |||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  36694439 gcaatcactaccacacatgaaattccaattttgcctttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattgaaatttcatg 36694538  T
Q  101 tatgacaatgatt 113  Q
    |||| || |||||    
T  36694539 tatggcagtgatt 36694551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 36710540 - 36710652
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    |||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  36710540 gcaatcactaccacacatgaaattccaattttgcctttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattgaaatttcatg 36710639  T
Q  101 tatgacaatgatt 113  Q
    |||| || |||||    
T  36710640 tatggcagtgatt 36710652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 11 - 186
Target Start/End: Complemental strand, 4960804 - 4960625
Alignment:
Q  11 ccacacatgaaattccaatttt--gctcttaagaagaggacaaaatattgaagaaa-gaattggaaacccatgggtaaaattgaaatttcatgtatgaca 107  Q
    |||||||||||||| |||||||  || ||||| ||||||||||||||||||||||| ||||||||||| || ||||||||||| |||||||||| |||||    
T  4960804 ccacacatgaaatttcaattttttgcacttaacaagaggacaaaatattgaagaaaagaattggaaactcaggggtaaaattggaatttcatgtgtgaca 4960705  T
Q  108 atgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
     |||||| || |||||||||||| |||  ||  |||||||||||||| |||| |||||||||||||| ||||||||||||    
T  4960704 gtgattgccacgtcatcaaattagtgacgtggcagtgattaagtgggaagagggacgaaattttaaatgattaaacaatg 4960625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 23209519 - 23209630
Alignment:
Q  2 caatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  23209519 caatcactaccacacatgaaattccaatttttcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaatttcatgt 23209618  T
Q  102 atgacaatgatt 113  Q
    ||| || |||||    
T  23209619 atggcagtgatt 23209630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 186
Target Start/End: Original strand, 19017797 - 19017972
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgtatgacaatga 111  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||| |||| ||||||||| ||| | ||||||||| |||||||||  || || |||    
T  19017797 cacacatgaaattccaattttgcccttgagaagaggacaaaatattgatgaaataattggaaatccaggagtaaaattggaatttcatgcgtggcagtga 19017896  T
Q  112 ttgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    |||||| |||||||||||| ||||  |  |||||||||||||| |||| ||| |||||||||| ||||||| ||||    
T  19017897 ttgtcacgtcatcaaattagtgatgcggcagtgattaagtgggaagagggacaaaattttaaatgattaaataatg 19017972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 150
Target Start/End: Complemental strand, 19323152 - 19323013
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgtatgacaatga 111  Q
    ||||||||||||| ||||||| | || ||||| |||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||| |||    
T  19323152 cacacatgaaatttcaattttaccctcaagaaaaggataaaatattgaagaaagaattggaaacccaggggtaaaattggaatttcatgtgtgacagtga 19323053  T
Q  112 ttgtcaggtcatcaaatta-tgatatgatagtgattaagt 150  Q
    |||||| |||||||||||| ||| ||| ||||||||||||    
T  19323052 ttgtcacgtcatcaaattagtgacatggtagtgattaagt 19323013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 40772744 - 40772641
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||    
T  40772744 gcaatcactcccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagatttggaaacccaggggtaaaattggaatttcatg 40772645  T
Q  101 tatg 104  Q
    ||||    
T  40772644 tatg 40772641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 49722997 - 49722885
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    |||||||| ||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  49722997 gcaatcactaccacacatgaaactcca-ttttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaatttcatg 49722899  T
Q  101 tatgacaatgattg 114  Q
    | ||||| ||||||    
T  49722898 tgtgacagtgattg 49722885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 19516056 - 19515944
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    |||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| || |||||||| |||||||||    
T  19516056 gcaatcactaccacacgtgaaattccaattttgcccttaagaagaggacaaaatattgaagagagaattggaaacccagggataaaattggaatttcatg 19515957  T
Q  101 tatgacaatgatt 113  Q
    |||| || |||||    
T  19515956 tatggcagtgatt 19515944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 7821225 - 7821039
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    |||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||  ||||||| || | |||||||    
T  7821225 gcaatcactaccacacatgaaattccatttttgcccttaagaagaggacaaaatattgaagaaagaattgaaaacccagaggtaaaaatggattttcatg 7821126  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
      ||||| |||||| || |||||||||||| |||  ||  |||||||| || ||   |  |||||||||||||| ||||||||||||    
T  7821125 cgtgacagtgattgccacgtcatcaaattagtgacgtggcagtgattacgttggtcaaaggacgaaattttaaatgattaaacaatg 7821039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 4716636 - 4716725
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  4716636 cacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaatttggaatttcatgt 4716725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 47999280 - 47999380
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||    
T  47999280 gcaatcactgccaaacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaactcaggggtaaaattggaatttcatg 47999379  T
Q  101 t 101  Q
    |    
T  47999380 t 47999380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 24905337 - 24905424
Alignment:
Q  14 cacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  24905337 cacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaatttggaatttcatgt 24905424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 183378 - 183479
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaaccca-tgggtaaaattgaaatttcat 99  Q
    ||||||||  ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||    
T  183378 gcaatcactgccaaacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccagggggtaaaattggaatttcat 183477  T
Q  100 gt 101  Q
    ||    
T  183478 gt 183479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 52134297 - 52134208
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  52134297 cacacatgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaatttggaatttcatgt 52134208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 28011587 - 28011503
Alignment:
Q  17 atgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  28011587 atgaaattccaattttacccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaatttgaaatttcatgt 28011503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 31514486 - 31514574
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||| |||||||||    
T  31514486 cacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaatccaggggtaaatttggaatttcatg 31514574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 26024662 - 26024563
Alignment:
Q  2 caatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    |||||||  ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||| |||||    
T  26024662 caatcactgccacacatgaaattctaattttgcccttaagaagaggacaaaatattgaagaaagaattgaaaacccaggggtaaaattggaattccatgt 26024563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 10304056 - 10304146
Alignment:
Q  11 ccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    |||||||||||||||||||||||| ||||||||||||| | || || ||||||||||||||||||||||||||||||||| ||||||||||    
T  10304056 ccacacatgaaattccaattttgcccttaagaagaggaaagaagatggaagaaagaattggaaacccatgggtaaaattggaatttcatgt 10304146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 33442762 - 33442851
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| || |||| ||| ||||||||||    
T  33442762 cacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaatccagggataaatttggaatttcatgt 33442851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 25648096 - 25648024
Alignment:
Q  29 ttttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||    
T  25648096 ttttgcccttaagaagaggacaaaatattgaagaaagaattggaaactcaggggtaaaattggaatttcatgt 25648024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 80 - 150
Target Start/End: Original strand, 19323128 - 19323199
Alignment:
Q  80 gggtaaaattgaaatttcatgtatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagt 150  Q
    |||||||||||||||||||||| ||||| ||||||||| |||||||||||| ||| ||| ||||||||||||    
T  19323128 gggtaaaattgaaatttcatgtgtgacagtgattgtcacgtcatcaaattagtgacatggtagtgattaagt 19323199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 36694545 - 36694591
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  36694545 agtgattaagtggggagagagacgaaattttaaatgattaaacaatg 36694591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 36710646 - 36710692
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  36710646 agtgattaagtggggagagagacgaaattttaaatgattaaacaatg 36710692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 181
Target Start/End: Original strand, 10304152 - 10304193
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaa 181  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  10304152 agtgattaagtggggagagagacgaaattttaaatgattaaa 10304193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 180
Target Start/End: Complemental strand, 13914260 - 13914159
Alignment:
Q  80 gggtaaaattgaaatttcatgtatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgatt 178  Q
    ||||||||||| |||||||||| ||||| ||||||||| |||||||||||| |||  || |||||||||||| ||   |  |||||||||||||| ||||    
T  13914260 gggtaaaattggaatttcatgtgtgacagtgattgtcacgtcatcaaattagtgacgtggtagtgattaagttggtcaaaggacgaaattttaaatgatt 13914161  T
Q  179 aa 180  Q
    ||    
T  13914160 aa 13914159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 186
Target Start/End: Complemental strand, 40772637 - 40772592
Alignment:
Q  141 gtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||    
T  40772637 gtgattaagtggggagagggacgaaattttaaatgattaaacaatg 40772592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 4716734 - 4716774
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  4716734 agtgattaagtggggagagagacgaaattttaaatgattaa 4716774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 52134199 - 52134159
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  52134199 agtgattaagtggggagagggacgaaattttaaacgattaa 52134159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 191
Target Start/End: Original strand, 183488 - 183539
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatgtaggg 191  Q
    ||||||||||||||||||| |||||||||||||| ||||||| |||| ||||    
T  183488 agtgattaagtggggagagggacgaaattttaaatgattaaataatgcaggg 183539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 191
Target Start/End: Complemental strand, 25648015 - 25647964
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatgtaggg 191  Q
    ||||||||||||||||||| |||||||||||||| ||||||| |||| ||||    
T  25648015 agtgattaagtggggagagggacgaaattttaaatgattaaataatgcaggg 25647964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 19515950 - 19515904
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||||||||||||||||| ||||||||||||||  |||||||||||    
T  19515950 agtgattaagtggggagagggacgaaattttaaataattaaacaatg 19515904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 26024554 - 26024508
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||||||||||||||||| |||||| ||||||| ||||||||||||    
T  26024554 agtgattaagtggggagagggacgaacttttaaatgattaaacaatg 26024508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 139 - 181
Target Start/End: Complemental strand, 42267435 - 42267393
Alignment:
Q  139 tagtgattaagtggggagagagacgaaattttaaacgattaaa 181  Q
    ||||||||||||||||||||||||||||| ||||| |||||||    
T  42267435 tagtgattaagtggggagagagacgaaatattaaatgattaaa 42267393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 10304054 - 10304013
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaa 181  Q
    ||||||||||||||||||| |||||||||||||| |||||||    
T  10304054 agtgattaagtggggagagggacgaaattttaaatgattaaa 10304013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 24905433 - 24905473
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||||||||||||| |||||||||||||| ||||||    
T  24905433 agtgattaagtggggagagggacgaaattttaaatgattaa 24905473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 28011494 - 28011454
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||||||||||||| |||||||||||||| ||||||    
T  28011494 agtgattaagtggggagagggacgaaattttaaatgattaa 28011454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 31514583 - 31514623
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||||||||||||| |||||||||||||| ||||||    
T  31514583 agtgattaagtggggagagggacgaaattttaaatgattaa 31514623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 33442860 - 33442900
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||||||||||||| |||||||||||||| ||||||    
T  33442860 agtgattaagtggggagagggacgaaattttaaatgattaa 33442900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 181
Target Start/End: Original strand, 16970834 - 16970873
Alignment:
Q  142 tgattaagtggggagagagacgaaattttaaacgattaaa 181  Q
    ||||||||||||||||| |||||||||||||| |||||||    
T  16970834 tgattaagtggggagagggacgaaattttaaatgattaaa 16970873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 191
Target Start/End: Original strand, 47999389 - 47999440
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatgtaggg 191  Q
    ||||||||||||||||||| ||||| |||||||| ||||||| |||| ||||    
T  47999389 agtgattaagtggggagagggacgatattttaaatgattaaataatgcaggg 47999440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 19017817 - 19017771
Alignment:
Q  84 aaaattgaaatttcatgtatgacaatgattgtcaggtcatcaaatta 130  Q
    ||||||| |||||||||| |||||||||||| || ||||||||||||    
T  19017817 aaaattggaatttcatgtgtgacaatgattgccacgtcatcaaatta 19017771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 23209624 - 23209670
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||||||||||||||||| ||||||||| |||| |||| |||||||    
T  23209624 agtgattaagtggggagagggacgaaattgtaaatgattgaacaatg 23209670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 130
Target Start/End: Original strand, 52134277 - 52134323
Alignment:
Q  84 aaaattgaaatttcatgtatgacaatgattgtcaggtcatcaaatta 130  Q
    |||||||||||||||||| ||||| |||||| || ||||||||||||    
T  52134277 aaaattgaaatttcatgtgtgacagtgattgccacgtcatcaaatta 52134323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 181
Target Start/End: Original strand, 27999148 - 27999189
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaa 181  Q
    |||||||||||||| ||||||||||||||| ||| |||||||    
T  27999148 agtgattaagtgggaagagagacgaaatttaaaatgattaaa 27999189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 34849142 - 34849101
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaa 181  Q
    |||||||||| |||||||| |||||||||||||| |||||||    
T  34849142 agtgattaagaggggagagggacgaaattttaaatgattaaa 34849101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 181
Target Start/End: Original strand, 34850362 - 34850403
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaa 181  Q
    ||||||||||||||||||| || ||||||||||| |||||||    
T  34850362 agtgattaagtggggagagggatgaaattttaaatgattaaa 34850403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 180
Target Start/End: Original strand, 41098973 - 41099070
Alignment:
Q  84 aaaattgaaatttcatgtatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||| ||||||| || ||||| |||||| || |||||||||||| ||| |||| ||||||||||| ||   |  |||||||||||||| ||||||    
T  41098973 aaaattggaatttcacgtgtgacagtgattgccacgtcatcaaattagtgacatgacagtgattaagttggtcaaatgacgaaattttaaatgattaa 41099070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 119; Significance: 7e-61; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 17202670 - 17202484
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||    
T  17202670 gcaatcactaccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaatccaggggtaaaattggaatttcatg 17202571  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    |||| || ||||||||| |||||||||||| ||| |||  ||||||||||||||||| | |||||||||||||| | ||||||||||    
T  17202570 tatggcagtgattgtcacgtcatcaaattagtgacatggcagtgattaagtggggagggggacgaaattttaaatgcttaaacaatg 17202484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 4 - 186
Target Start/End: Original strand, 29646522 - 29646705
Alignment:
Q  4 atcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgtat 103  Q
    ||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| || |||||||||    
T  29646522 atcactaccacacatgaaattccaatttttcccttaagaagaggacaaaatattgaagaaagaattggaaatccaggggtaaaattggaaattcatgtat 29646621  T
Q  104 gacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    |  | ||||||||| |||||||||||| ||| |||| ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  29646622 ggtagtgattgtcacgtcatcaaattagtgacatgacagtgattaagtggggagagggacgaaattttaaatgattaaacaatg 29646705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 186690 - 186504
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    |||||||| ||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  186690 gcaatcactaccacacatgaaatttcaagtttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaatttcatg 186591  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||  | |||||| || |||||||||||| ||| ||| |||||||||||||||| ||| |||||||||||||| ||||||||||||    
T  186590 tatggtagtgattgccacgtcatcaaattagtgacatggtagtgattaagtggggggagggacgaaattttaaatgattaaacaatg 186504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 8322675 - 8322489
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    |||||||| ||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||    
T  8322675 gcaatcaccaccacacatgaaaattcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaattttatg 8322576  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    |||| || ||||||  | |||||||||||| ||| |||| ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  8322575 tatggcagtgattgcaacgtcatcaaattagtgaaatgacagtgattaagtggggagagggacgaaattttaaatgattaaacaatg 8322489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 11047708 - 11047522
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    |||||||| ||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||| |||    
T  11047708 gcaatcactaccatgcatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaactcatagataaaattgaaattttatg 11047609  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    |||| || |||||| || |||||||||||| ||| |||  |||||||||||||||||||||||||||||||||| ||||||||||||    
T  11047608 tatggcagtgattgccacgtcatcaaattagtgacatggcagtgattaagtggggagagagacgaaattttaaatgattaaacaatg 11047522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 14194580 - 14194766
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    |||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||    
T  14194580 gcaatcactaccacacatgaaattccaatttagcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattagaatttcatg 14194679  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    |||| || |||||| || |||||||||||| ||| ||   ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  14194680 tatggcagtgattgccacgtcatcaaattagtgacatagcagtgattaagtggggagagggacgaaattttaaatgattaaacaatg 14194766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 39453570 - 39453385
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| || ||||||||||| |||||||||    
T  39453570 gcaatcactaccacacatgaaattccaattttgcccttaagaagaggacaaa-tattgaagaaagaattggaaactcaggggtaaaattggaatttcatg 39453472  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    |||| || |||||| || |||||||||||| ||| |||  ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  39453471 tatggcagtgattgccacgtcatcaaattagtgacatgccagtgattaagtggggagagggacgaaattttaaatgattaaacaatg 39453385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 21265300 - 21265484
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||    
T  21265300 gcaatcactaccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccagtggtaaaattggaatttcatg 21265399  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||||| ||||||||| |||||||||||| ||| ||   |||||||||||  | |||||||||||||||||||  |||||||||||    
T  21265400 tatgacagtgattgtcatgtcatcaaattagtgacatagcagtgattaagt--gaagagagacgaaattttaaataattaaacaatg 21265484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 2 - 186
Target Start/End: Complemental strand, 5994159 - 5993974
Alignment:
Q  2 caatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||| | ||||||||||||||||||||| | ||||||||||||| ||||||||||  ||||||||||||||||| ||||||||||| ||||||||||    
T  5994159 caatcactatcacacatgaaattccaatttttcccttaagaagaggataaaatattgagaaaagaattggaaacccaggggtaaaattggaatttcatgt 5994060  T
Q  102 atgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||| || ||||||||| |||||||||||| ||| |||  ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  5994059 atggcagtgattgtcacgtcatcaaattagtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatg 5993974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 11 - 186
Target Start/End: Complemental strand, 35512409 - 35512233
Alignment:
Q  11 ccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgtatgacaatg 110  Q
    |||||| |||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||  |    
T  35512409 ccacacgtgaaattctaatttttcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaatttcatgtgtgacaggg 35512310  T
Q  111 attgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||||| |||||||||||| |||| ||  ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  35512309 attgtcatgtcatcaaattagtgatgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatg 35512233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 16157012 - 16157198
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  16157012 gcaatcactcccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattgaaatttcatg 16157111  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
     ||| || ||||||    |||||||||||| ||| |||  || |||||||||||||||| ||| |||||||||| ||||||||||||    
T  16157112 catggcagtgattgctgcgtcatcaaattagtgacatggcagggattaagtggggagagggacaaaattttaaatgattaaacaatg 16157198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 32242513 - 32242327
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  |||||||||||||||||||||| | |||| ||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||| ||    
T  32242513 gcaatcactgccacacatgaaattccaatttttcccttacgaagaggacaacatattgaagaaagaattggaaacccaggggtaaaattggaatttcgtg 32242414  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    | ||||| ||||||||| |||||||||||| |||  ||  ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  32242413 tgtgacagtgattgtcacgtcatcaaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatg 32242327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 2 - 186
Target Start/End: Complemental strand, 38442337 - 38442153
Alignment:
Q  2 caatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    |||||||  |||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||    
T  38442337 caatcactgccacacgtgaaattccaactttgcccttaagaagaggacaaaatattgaagaaagaatt-gaaactcatgggtaaaattggaatttcatgt 38442239  T
Q  102 atgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    |||||| |||||| || |||||||||||| | || ||  ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  38442238 atgacagtgattgccacgtcatcaaattagttatgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatg 38442153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 12 - 186
Target Start/End: Original strand, 19892476 - 19892651
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgtatgacaatga 111  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||  ||||||||| ||||| |||    
T  19892476 cacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacacaggggtaaaattgggatttcatgtgtgacagtga 19892575  T
Q  112 ttgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||| || |||||||||||| |||  ||  ||||||||||||||||||  |||||||||||||| ||||||||||||    
T  19892576 ttgccacgtcatcaaattagtgacgtggcagtgattaagtggggagaatgacgaaattttaaatgattaaacaatg 19892651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 4 - 186
Target Start/End: Original strand, 20814295 - 20814478
Alignment:
Q  4 atcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgtat 103  Q
    ||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||  ||| ||| ||||||||||| ||||||||||||    
T  20814295 atcactaccacacatgaaatttcaattttgcccttaagaagaggacaaaatattgaaaaaagaatttaaaatccaggggtaaaattggaatttcatgtat 20814394  T
Q  104 gacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    |||| ||||||||| |||||||||||| ||| |||  ||||||||||| ||||||| ||| |||||||||| ||||||||||||    
T  20814395 gacagtgattgtcatgtcatcaaattagtgacatggcagtgattaagtagggagagggacaaaattttaaatgattaaacaatg 20814478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 10684209 - 10684024
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| || ||||||||||| |||||||||    
T  10684209 gcaatcactaccacacatgaaattccaattttgcccttaagaagaggacaaa-tattgaagaaagaattggaaacacaggggtaaaattggaatttcatg 10684111  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    |||| || |||||| || |||||||||||| ||| |||| |||||||||||| ||| || ||| |||||||||| ||||||| ||||    
T  10684110 tatggcagtgattgccacgtcatcaaattagtgacatgacagtgattaagtgaggaaagtgacaaaattttaaatgattaaataatg 10684024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 2 - 186
Target Start/End: Complemental strand, 18247353 - 18247169
Alignment:
Q  2 caatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||| ||||||| ||||||||||||||||| ||||    
T  18247353 caatcactaccacacatgaaattccaattttgcccttaagaagaggacaaa-tattaaagaaagaattgaaaacccaggggtaaaattgaaattttatgt 18247255  T
Q  102 atgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    |||||| |||||| || |||||||||||| ||| |||   |||||||||||||||||| ||||||||| |||| ||||||| ||||    
T  18247254 atgacagtgattgccacgtcatcaaattagtgacatggcggtgattaagtggggagagggacgaaattctaaatgattaaataatg 18247169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 3 - 186
Target Start/End: Original strand, 13362386 - 13362571
Alignment:
Q  3 aatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattgga-aacccatgggtaaaattgaaatttcatgt 101  Q
    |||||||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| | ||||||||||| |||||||||     
T  13362386 aatcacagacacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggataacctaggggtaaaattggaatttcatgc 13362485  T
Q  102 atgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
     || || |||||| || |||||||||||| |||| |   ||||||||||||||||||||||| |||||||||| ||||||||||||    
T  13362486 gtggcagtgattgccacgtcatcaaattagtgatgtagcagtgattaagtggggagagagactaaattttaaatgattaaacaatg 13362571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 5024176 - 5024361
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  ||| || ||||||||||||||| |  ||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  5024176 gcaatcactgccatacgtgaaattccaatttttccgttaagaagaagacaaaatattgaagaaagaattggaaaccca-gggtaaaattggaatttcatg 5024274  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    | ||||| ||||||||  |||||||||||| |||| ||  |||||||||||||||||||  ||||||||||||| ||||||||||||    
T  5024275 tgtgacagtgattgtcgcgtcatcaaattagtgatgtggcagtgattaagtggggagaggaacgaaattttaaatgattaaacaatg 5024361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 11 - 186
Target Start/End: Complemental strand, 13963124 - 13962949
Alignment:
Q  11 ccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgtatgacaatg 110  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||| ||| ||||||||||| |||||||||| ||| | ||    
T  13963124 ccacacgtgaaattccaattttgcccttaagaagaggacaaaatattgaa-aaagaactggaaatccaggggtaaaattggaatttcatgtgtgatagtg 13963026  T
Q  111 attgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    |||| || |||||||||||| |||  ||| |||||||||||| |||||| |||||||||||||| ||||||||||||    
T  13963025 attgccacgtcatcaaattagtgacgtgacagtgattaagtgaggagagggacgaaattttaaatgattaaacaatg 13962949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 6301814 - 6301685
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  6301814 gcaatcactgccacacatgaaattccaattttggccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaatttcatg 6301715  T
Q  101 tatgacaatgattgtcaggtcatcaaatta 130  Q
    | || || ||||||||| ||||||||||||    
T  6301714 tgtggcagtgattgtcacgtcatcaaatta 6301685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 27937188 - 27937347
Alignment:
Q  13 acacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgtatgacaatgat 112  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||| ||| | ||||    
T  27937188 acacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattgaaaacccaggggtaaaattggaatttcatgtgtgatagtgat 27937287  T
Q  113 tgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaatttta 171  Q
    || || |||||||||||| |||  ||  ||||||| ||||||||||| ||| ||||||||    
T  27937288 tgccacgtcatcaaattagtgacgtggcagtgatttagtggggagagggacaaaatttta 27937347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 6150691 - 6150579
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    |||||||| ||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  6150691 gcaatcactaccacacataaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaagggtaaaattggaatttcatg 6150592  T
Q  101 tatgacaatgatt 113  Q
    |||| ||||||||    
T  6150591 tatggcaatgatt 6150579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 18670436 - 18670324
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| || ||||||||||| |||||||||    
T  18670436 gcaatcactaccacacatgaaattccaattttgcccttaagaagagtacaaaatattgaagaaagaattggaaactcaggggtaaaattggaatttcatg 18670337  T
Q  101 tatgacaatgatt 113  Q
    |||| ||||||||    
T  18670336 tatggcaatgatt 18670324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 19517878 - 19517755
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    |||||||| |||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||| ||| |||||||||    
T  19517878 gcaatcactaccacacatgaaataccaattttgcccttaagaagaggacaaaatagtgaagaaagaattggaaacccaggggtaaatttggaatttcatg 19517779  T
Q  101 tatgacaatgattgtcaggtcatc 124  Q
    |||| || ||||||||| ||||||    
T  19517778 tatggcagtgattgtcacgtcatc 19517755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 24547323 - 24547413
Alignment:
Q  11 ccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  24547323 ccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaatttcatgt 24547413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 38475190 - 38475290
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  38475190 gcaatcactgccacacatgaaattccaattttacccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaatttcatg 38475289  T
Q  101 t 101  Q
    |    
T  38475290 t 38475290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 1506196 - 1506107
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  1506196 cacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaatttggaatttcatgt 1506107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 6758033 - 6758122
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  6758033 cacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaatttggaatttcatgt 6758122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 31482570 - 31482659
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  31482570 cacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaatttggaatttcatgt 31482659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 3529031 - 3529130
Alignment:
Q  2 caatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    |||||||  ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||    
T  3529031 caatcactgccaaacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaattttatgt 3529130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 28269580 - 28269691
Alignment:
Q  2 caatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||| |||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||| ||||    
T  28269580 caatcactaccacacatgaaattttaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggagtaaaattggaattttatgt 28269679  T
Q  102 atgacaatgatt 113  Q
    ||| || |||||    
T  28269680 atggcagtgatt 28269691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 28771042 - 28771126
Alignment:
Q  17 atgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  28771042 atgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaatttcatgt 28771126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 99
Target Start/End: Complemental strand, 16083203 - 16083116
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcat 99  Q
    ||||||||||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  16083203 cacacatgaaattcctattttgcccttaagaagatgacaaaatattgaagaaagaattggaaacccaggggtaaaattggaatttcat 16083116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 41930745 - 41930656
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| || ||||||| ||| ||||||||||    
T  41930745 cacacatgaaattccaattttgcccttaagaagatgacaaaatattgaagaaagaattggaaactcaggggtaaatttggaatttcatgt 41930656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 27587372 - 27587288
Alignment:
Q  15 acatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||| ||||||||||| ||||| ||||    
T  27587372 acatgaaattccaattttgcccttaagaagaggacaaaatattgaag--agaattggaaacccaggggtaaaattggaattttatgt 27587288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 297182 - 297271
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||| ||||||| ||||||| ||  ||||||||||    
T  297182 cacacatgaaattacaattttgccctcaagaagaggacaaaatattgaagaaagaattgaaaacccaggggtaaatttcgaatttcatgt 297271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 35920385 - 35920487
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||          |||||||||||| ||||||||||| |||||||||    
T  35920385 gcaatcactaccacacatgaaattccaattttgcccttaagaagaggacaaaatat----------attggaaacccaggggtaaaattggaatttcatg 35920474  T
Q  101 tatgacaatgatt 113  Q
    ||||||| |||||    
T  35920475 tatgacagtgatt 35920487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 11761988 - 11761889
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  ||| |||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||| ||  ||||||||||| |||||||||    
T  11761988 gcaatcactgccaaacatgaaattccaattttgcccttaagaagaggacaaaatattgaa-aaaggattggaaatcctggggtaaaattggaatttcatg 11761890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 191
Target Start/End: Original strand, 3529139 - 3529190
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatgtaggg 191  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  3529139 agtgattaagtggggagagggacgaaattttaaatgattaaacaatgtaggg 3529190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 186
Target Start/End: Original strand, 35920475 - 35920527
Alignment:
Q  134 tatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||| ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  35920475 tatgacagtgattaagtggggagagggacgaaattttaaatgattaaacaatg 35920527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 173
Target Start/End: Complemental strand, 12904942 - 12904852
Alignment:
Q  84 aaaattgaaatttcatgtatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaa 173  Q
    |||||||||||||||||| || || ||||||| | || ||||||||| |||  ||| | ||||||||||||||||| ||||||||||||||    
T  12904942 aaaattgaaatttcatgtgtggcagtgattgtaacgttatcaaattagtgacgtgacattgattaagtggggagagggacgaaattttaaa 12904852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 28269685 - 28269731
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  28269685 agtgattaagtggggagagggacgaaattttaaatgattaaacaatg 28269731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 38475296 - 38475342
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  38475296 agtgattaagtggggagagggacgaaattttaaatgattaaacaatg 38475342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 185
Target Start/End: Original strand, 28771135 - 28771180
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaat 185  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||    
T  28771135 agtgattaagtggggagagggacgaaattttaaatgattaaacaat 28771180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 1506098 - 1506058
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  1506098 agtgattaagtggggagagggacgaaattttaaacgattaa 1506058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 6150583 - 6150539
Alignment:
Q  142 tgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||    
T  6150583 tgattaagtggggagagggacgaaattttaaatgattaaacaatg 6150539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 24547422 - 24547468
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    |||| |||||||||||||| |||||||||||||| ||||||||||||    
T  24547422 agtggttaagtggggagagggacgaaattttaaatgattaaacaatg 24547468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 11761878 - 11761829
Alignment:
Q  142 tgattaagtggggagagagacgaaattttaaacgattaaacaatgtaggg 191  Q
    ||||||||||||||||  |||||||||||||| |||||||||||| ||||    
T  11761878 tgattaagtggggagatggacgaaattttaaatgattaaacaatgcaggg 11761829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 297280 - 297320
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||||||||||||| |||||||||||||| ||||||    
T  297280 agtgattaagtggggagagggacgaaattttaaatgattaa 297320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 6758131 - 6758171
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||||||||||||| |||||||||||||| ||||||    
T  6758131 agtgattaagtggggagagggacgaaattttaaatgattaa 6758171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 18670328 - 18670284
Alignment:
Q  142 tgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||    
T  18670328 tgattaagtggggagatggacgaaattttaaatgattaaacaatg 18670284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 31482668 - 31482708
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||||||||||||| |||||||||||||| ||||||    
T  31482668 agtgattaagtggggagagggacgaaattttaaatgattaa 31482708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 41930647 - 41930607
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||||||||||||| |||||||||||||| ||||||    
T  41930647 agtgattaagtggggagagggacgaaattttaaatgattaa 41930607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 191
Target Start/End: Complemental strand, 27587279 - 27587228
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatgtaggg 191  Q
    ||||||||| ||||||||| |||||||||||||| |||||||| ||| ||||    
T  27587279 agtgattaaatggggagagggacgaaattttaaatgattaaacgatgcaggg 27587228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 16083108 - 16083062
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||||||||| |||||||  ||||||||||||| ||||||||||||    
T  16083108 agtgattaagttgggagaggtacgaaattttaaatgattaaacaatg 16083062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 20840664 - 20840618
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||||||||||||||||| ||| ||||||||||  |||||||||||    
T  20840664 agtgattaagtggggagagggacaaaattttaaatcattaaacaatg 20840618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 180
Target Start/End: Original strand, 5994129 - 5994226
Alignment:
Q  84 aaaattgaaatttcatgtatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||| |||||||||| ||| | ||||||||| |||||||||||| ||| |||  ||||||||||| ||   |  |||||||||||||| ||||||    
T  5994129 aaaattggaatttcatgtgtgatagtgattgtcacgtcatcaaattagtgacatggcagtgattaagttggtcaaaggacgaaattttaaatgattaa 5994226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 157
Target Start/End: Original strand, 4700325 - 4700425
Alignment:
Q  58 gaagaaagaattggaaacccatgggtaaaattgaaatttcatgtatgacaatgattgtcaggtcatcaaa-ttatgatatgatagtgattaagtggggag 156  Q
    ||||||||||||| ||| |||  | |||||||| ||||| |||| ||||| |||||| || ||||||||| ||||||| ||  ||| ||||||||| |||    
T  4700325 gaagaaagaattgaaaatccaaagctaaaattggaattttatgtgtgacagtgattgccacgtcatcaaatttatgatgtggcagtaattaagtggagag 4700424  T
Q  157 a 157  Q
    |    
T  4700425 a 4700425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 119; Significance: 7e-61; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 43384554 - 43384368
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || | |||||| ||||| |||    
T  43384554 gcaatcactaccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccagggttgaaattggaattttatg 43384455  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||  | |||||| || |||||||||||| ||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  43384454 tatggtagtgattgccacgtcatcaaattagtgacatgacagtgattaagtggggagagagacgaaattttaaatgattaaacaatg 43384368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 9294115 - 9294301
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    |||||||| |||||||||||||||| ||||||||  ||||||||| ||||||||||||||||||||||||||||| || ||||||||||| |||||||||    
T  9294115 gcaatcactaccacacatgaaattctaattttgccgttaagaagatgacaaaatattgaagaaagaattggaaactcaggggtaaaattggaatttcatg 9294214  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    |||| || |||||| || |||||||||||| ||| |||| ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  9294215 tatggcagtgattgccacgtcatcaaattagtgacatgacagtgattaagtggggagagggacgaaattttaaatgattaaacaatg 9294301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 23458136 - 23458322
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    |||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| || ||||||||||| |||||||||    
T  23458136 gcaatcactatcacacatgaaattccaatttttctcttaagaagaggacaaaatattgaagaaagaattagaaactcaggggtaaaattggaatttcatg 23458235  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    | ||||| |||||| || |||||||||||| |||| ||  ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  23458236 tgtgacagtgattggcacgtcatcaaattagtgatgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatg 23458322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 11 - 186
Target Start/End: Complemental strand, 40758405 - 40758229
Alignment:
Q  11 ccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgtatgacaatg 110  Q
    |||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||  ||    
T  40758405 ccacacgtgaaattccaactttgcccttaagaagaggacaaaatattgaagaaagaataggaaacccaggggtaaaattgaaatttcatgtgtgacggtg 40758306  T
Q  111 attgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    |||| || |||||||||||| |||  || |||||||||||||||||||| |||||||||||||| ||||||||||||    
T  40758305 attgccacgtcatcaaattagtgacgtggtagtgattaagtggggagagggacgaaattttaaatgattaaacaatg 40758229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 15 - 185
Target Start/End: Original strand, 26463769 - 26463940
Alignment:
Q  15 acatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgtatgacaatgattg 114  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||| || |||||||||| ||||| ||||||    
T  26463769 acatgaaattccaattttgcccttaagaagaggacaaaattttgaagaaagaattggaaacccaggggtaaaactggaatttcatgtgtgacagtgattg 26463868  T
Q  115 tcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaat 185  Q
     || |||||||||||| |||  ||| ||||||||||||||||||| |||||||||||||| |||||||||||    
T  26463869 ccatgtcatcaaattagtgacgtgacagtgattaagtggggagagggacgaaattttaaatgattaaacaat 26463940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 2 - 186
Target Start/End: Original strand, 33689539 - 33689722
Alignment:
Q  2 caatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| || ||||||||||| ||||||||||    
T  33689539 caatcactatcacacatgaaattccaattttgc-cttaagaagaggacaaaatattgaa-aaagaattggaaactcaggggtaaaattggaatttcatgt 33689636  T
Q  102 atgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    |||||| |||||| || |||||| ||||| |||  ||  ||||||||||||||||||| |||||||||||||| ||||||| ||||    
T  33689637 atgacagtgattgccacgtcatcgaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaataatg 33689722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 36417959 - 36417809
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||    
T  36417959 gcaatcactaccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtataattggaatttcatg 36417860  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagt 150  Q
    ||||| | |||||| ||  ||||||||||| ||| ||||  ||||||||||    
T  36417859 tatgatagtgattgccacatcatcaaattagtgacatgacggtgattaagt 36417809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 11 - 130
Target Start/End: Complemental strand, 42343026 - 42342907
Alignment:
Q  11 ccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgtatgacaatg 110  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||| ||||| ||    
T  42343026 ccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaatccaggggtaaaattggaatttcatgtgtgacattg 42342927  T
Q  111 attgtcaggtcatcaaatta 130  Q
    ||||||| |||||| |||||    
T  42342926 attgtcatgtcatctaatta 42342907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 40033647 - 40033759
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  40033647 gcaatcactgccacacatgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattgaaaacccatgggtaaaattggaatttcatg 40033746  T
Q  101 tatgacaatgatt 113  Q
    | ||||| |||||    
T  40033747 tgtgacagtgatt 40033759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 46475052 - 46474940
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| || ||||||||||| |||||||||    
T  46475052 gcaatcactaccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaataattggaaactcaggggtaaaattggaatttcatg 46474953  T
Q  101 tatgacaatgatt 113  Q
    |||| || |||||    
T  46474952 tatggcagtgatt 46474940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 101
Target Start/End: Complemental strand, 2796409 - 2796319
Alignment:
Q  11 ccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  2796409 ccacacatgaaattccaattttgccctttagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaatttcatgt 2796319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 51994088 - 51994174
Alignment:
Q  15 acatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||    
T  51994088 acatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaaccccggggtaaaattggaatttcatgt 51994174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 8041845 - 8041756
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  8041845 cacacatgaaattacaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaatttggaatttcatgt 8041756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 48322545 - 48322634
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||| ||| ||||||||||    
T  48322545 cacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattagaaacccaggggtaaatttggaatttcatgt 48322634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 54466652 - 54466563
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  54466652 cacacatgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaatttggaatttcatgt 54466563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 10770658 - 10770748
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaaccca-tgggtaaaattgaaatttcatgt 101  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| ||||||||||    
T  10770658 cacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccagggggtaaatttggaatttcatgt 10770748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 19741091 - 19741180
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||    
T  19741091 cacacatgaaattccaattttacctttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggattttcatgt 19741180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 36314466 - 36314555
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||| ||| ||||||||||    
T  36314466 cacacatgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaactcaggggtaaatttggaatttcatgt 36314555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 55052450 - 55052536
Alignment:
Q  15 acatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    |||||||||| ||||||||| |||||||||||||||||||||| |||||||||||| |||| || ||||||||||| ||||||||||    
T  55052450 acatgaaatttcaattttgcccttaagaagaggacaaaatattaaagaaagaattgaaaactcaggggtaaaattggaatttcatgt 55052536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 20359293 - 20359354
Alignment:
Q  190 ggatttaaaaatagagtgatgattttatttaccacaataaagaatctaaacctagcagagaa 251  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  20359293 ggatttaaaaatagagtgatggttttatttaccacaataaagaatctaaacctagcagagaa 20359354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 53756993 - 53756923
Alignment:
Q  2 caatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaa 73  Q
    ||||||| ||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||    
T  53756993 caatcactaccacacatgaaattccaattttcc-ctgaagaagaggacaaaatattgaagaaagaattggaa 53756923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 40506036 - 40506132
Alignment:
Q  93 atttcatgtatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatgta 188  Q
    |||||||||||| ||||||||| ||  ||||||||||| | | |||| |||||||||||| ||||||||||||||||||||| ||||||| ||||||    
T  40506036 atttcatgtatggcaatgattgccacatcatcaaattagttacatgacagtgattaagtgcggagagagacgaaattttaaatgattaaataatgta 40506132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 181
Target Start/End: Complemental strand, 41988175 - 41988052
Alignment:
Q  58 gaagaaagaattggaaacccatgggtaaaattgaaatttcatgtatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggag 156  Q
    |||||||||||||||||   | | ||||||||| |||||||||| | ||| |||||| || || ||||||||| |||| ||  |||||||||||| ||||    
T  41988175 gaagaaagaattggaaattaaggagtaaaattggaatttcatgtgtaacagtgattgccacgt-atcaaattagtgatgtggcagtgattaagtgaggag 41988077  T
Q  157 agagacgaaattttaaacgattaaa 181  Q
    ||||||||||||||||| |||||||    
T  41988076 agagacgaaattttaaatgattaaa 41988052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 191
Target Start/End: Original strand, 51994183 - 51994234
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatgtaggg 191  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||| ||||    
T  51994183 agtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaggg 51994234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 2796310 - 2796264
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  2796310 agtgattaagtggggagagggacgaaattttaaatgattaaacaatg 2796264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 185
Target Start/End: Original strand, 19741189 - 19741234
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaat 185  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||    
T  19741189 agtgattaagtggggagagtgacgaaattttaaatgattaaacaat 19741234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 186
Target Start/End: Complemental strand, 53756924 - 53756829
Alignment:
Q  92 aatttcatgtatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    |||||||||||||| | |||||| ||  ||||||||||| ||| |||| | ||||||| |||| |||  |||||||||||||| ||||||||||||    
T  53756924 aatttcatgtatgatagtgattgccacatcatcaaattagtgacatgacaatgattaaatgggaagatggacgaaattttaaatgattaaacaatg 53756829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 186
Target Start/End: Original strand, 55052544 - 55052591
Alignment:
Q  139 tagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    |||||||||| ||||||||| |||||||||||||| ||||||||||||    
T  55052544 tagtgattaaatggggagagggacgaaattttaaatgattaaacaatg 55052591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 33156291 - 33156337
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||||||||||||| ||| |||||||||||||| ||||||||||||    
T  33156291 agtgattaagtggggggagggacgaaattttaaatgattaaacaatg 33156337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 40033753 - 40033799
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||    
T  40033753 agtgattaagtggggagagggacaaaattttaaatgattaaacaatg 40033799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 46474946 - 46474900
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||    
T  46474946 agtgattaagtggggagagggacaaaattttaaatgattaaacaatg 46474900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 8041747 - 8041707
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||||||||||||| |||||||||||||| ||||||    
T  8041747 agtgattaagtggggagagggacgaaattttaaatgattaa 8041707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 10770757 - 10770797
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||||||||||||| |||||||||||||| ||||||    
T  10770757 agtgattaagtggggagagggacgaaattttaaatgattaa 10770797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 36314564 - 36314604
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||||||||||||| |||||||||||||| ||||||    
T  36314564 agtgattaagtggggagagggacgaaattttaaatgattaa 36314604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 48322643 - 48322683
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||||||||||||| |||||||||||||| ||||||    
T  48322643 agtgattaagtggggagagggacgaaattttaaatgattaa 48322683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 54466554 - 54466514
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||||||||||||| |||||||||||||| ||||||    
T  54466554 agtgattaagtggggagagggacgaaattttaaatgattaa 54466514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 36314486 - 36314440
Alignment:
Q  84 aaaattgaaatttcatgtatgacaatgattgtcaggtcatcaaatta 130  Q
    |||||||||||||||||| ||||| |||||| || ||||||||||||    
T  36314486 aaaattgaaatttcatgtgtgacagtgattgccacgtcatcaaatta 36314440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 130
Target Start/End: Original strand, 54466632 - 54466678
Alignment:
Q  84 aaaattgaaatttcatgtatgacaatgattgtcaggtcatcaaatta 130  Q
    |||||||||||||||||| ||||| |||||| || ||||||||||||    
T  54466632 aaaattgaaatttcatgtgtgacagtgattgccacgtcatcaaatta 54466678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 55052467 - 55052421
Alignment:
Q  84 aaaattgaaatttcatgtatgacaatgattgtcaggtcatcaaatta 130  Q
    |||||||||||||||||| ||||| |||||| || ||||||||||||    
T  55052467 aaaattgaaatttcatgtttgacagtgattgccacgtcatcaaatta 55052421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 181
Target Start/End: Original strand, 39399389 - 39399430
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaa 181  Q
    ||||||||| |||||||||||| ||||||||||| |||||||    
T  39399389 agtgattaactggggagagagatgaaattttaaatgattaaa 39399430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 181
Target Start/End: Original strand, 54317928 - 54317969
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaa 181  Q
    ||||||||| | |||||||||||||||||||||| |||||||    
T  54317928 agtgattaattagggagagagacgaaattttaaatgattaaa 54317969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 113; Significance: 3e-57; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 186
Target Start/End: Original strand, 16388686 - 16388869
Alignment:
Q  3 aatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgta 102  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||     
T  16388686 aatcactaccacacatgaaattccaattttgcacttaagaagaggacacaatattgaagaaagaattggaaaccca-gggtaaaattggaatttcatgtg 16388784  T
Q  103 tgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||| |||||| || |||||||||||| |||  ||  ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  16388785 tgacagtgattgccacgtcatcaaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatg 16388869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 36928747 - 36928561
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    |||||||| | ||||| |||||||||||||||||  |||||||||||||||||||||||||| |||||||||| | || |||||||||||||||||||||    
T  36928747 gcaatcactatcacacgtgaaattccaattttgcctttaagaagaggacaaaatattgaagagagaattggaagctcaagggtaaaattgaaatttcatg 36928648  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||||| ||||||||| |||||||||||| |||  ||  ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  36928647 tatgacagtgattgtcacgtcatcaaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatg 36928561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 2 - 185
Target Start/End: Complemental strand, 35756852 - 35756668
Alignment:
Q  2 caatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||| ||||||||||||||| ||||||||| |||||||||| |||||||||||||||||| |||||||||| || ||||||||||| |||||||| |    
T  35756852 caatcactaccacacatgaaatttcaattttgcccttaagaagatgacaaaatattgaagaaataattggaaactcaggggtaaaattggaatttcatat 35756753  T
Q  102 atgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaat 185  Q
    |||||| |||||| || |||||||||||| ||| |||  ||||||||||||||||||| |||||||||||||| |||||||||||    
T  35756752 atgacagtgattgccacgtcatcaaattagtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaaacaat 35756668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 13186330 - 13186145
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||| |||||| |||||||||    
T  13186330 gcaatcactgccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaaccccggggt-aaattggaatttcatg 13186232  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    | ||||| |||||| || ||||| |||||| |||  ||  |||||||||||||||||||||||||||||||||| ||||||||||||    
T  13186231 tgtgacagtgattgccacgtcattaaattagtgacgtggcagtgattaagtggggagagagacgaaattttaaatgattaaacaatg 13186145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 40318121 - 40318307
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    |||||||| | |||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||    
T  40318121 gcaatcactatcacacatgaaattccaatcttgcccttaagaagaggacaaaatattgaataaagaattggaaacccaggggtaaaattggaatttcatg 40318220  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||||  |||||| || |||||||||||| ||| |||  |||||||||||| |||||  |||||||||||||| ||||||||||||    
T  40318221 tatgactgtgattgccacgtcatcaaattagtgacatggcagtgattaagtgaggagaaggacgaaattttaaatgattaaacaatg 40318307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 10 - 186
Target Start/End: Original strand, 4994823 - 4995000
Alignment:
Q  10 accacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgtatgacaat 109  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||  |||||||||| |||||||||||||  | |    
T  4994823 accacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattgaaaacccagcggtaaaattggaatttcatgtatggtagt 4994922  T
Q  110 gattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||| || |||||||||||| ||| |||| |  |||||||||||||||| |||||||||| ||| ||||||||||||    
T  4994923 gattgccacgtcatcaaattagtgacatgacatggattaagtggggagagggacgaaatttgaaatgattaaacaatg 4995000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 2 - 186
Target Start/End: Original strand, 31608671 - 31608856
Alignment:
Q  2 caatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||| | |||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  31608671 caatcactatcacatatgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaatttcatgt 31608770  T
Q  102 atgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
     ||||| |||||| || | |||||||||| |||  ||  ||||||||||||||||||| |||||||||||||| ||||| ||||||    
T  31608771 gtgacagtgattgccacgccatcaaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattagacaatg 31608856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 36186237 - 36186410
Alignment:
Q  14 cacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgtatgacaatgatt 113  Q
    ||||||||||  ||||||||| |||||||||||||||||||||||||||||||| |||||||||| | ||||||||| |||||||||| ||||| |||||    
T  36186237 cacatgaaatatcaattttgcacttaagaagaggacaaaatattgaagaaagaactggaaacccaggagtaaaattggaatttcatgtgtgacactgatt 36186336  T
Q  114 gtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    |||| |||||||||||| | || ||  ||||||||||| ||||||| |||||||||||||| ||||||||||||    
T  36186337 gtcacgtcatcaaattagtaatgtggcagtgattaagtagggagagggacgaaattttaaatgattaaacaatg 36186410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 2 - 183
Target Start/End: Original strand, 4405820 - 4406000
Alignment:
Q  2 caatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    |||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||  |||||||||     
T  4405820 caatcactgccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaactcaggggtaaaatttgaatttcatg- 4405918  T
Q  102 atgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaaca 183  Q
     ||||| |||||| || ||| |||||||| |||  ||| |||||||||||||| |||| |||||||||||||| |||||||||    
T  4405919 -tgacagtgattgccacgtcttcaaattagtgacgtgacagtgattaagtgggaagagggacgaaattttaaatgattaaaca 4406000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 11 - 186
Target Start/End: Complemental strand, 39071937 - 39071761
Alignment:
Q  11 ccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgtatgacaatg 110  Q
    ||||| || ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||| | ||| | ||    
T  39071937 ccacatataaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaactcaggggtaaaattggaatttcatttgtgatagtg 39071838  T
Q  111 attgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    |||| || ||| |||||||| |||   |  ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  39071837 attgccacgtcgtcaaattagtgacgcggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatg 39071761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 11 - 106
Target Start/End: Complemental strand, 38862858 - 38862763
Alignment:
Q  11 ccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgtatgac 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||    
T  38862858 ccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacctaagggtaaaattgaaatttcatgtgtgac 38862763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 12199107 - 12199207
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  12199107 gcaatcacggccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaatttcatg 12199206  T
Q  101 t 101  Q
    |    
T  12199207 t 12199207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 12443535 - 12443635
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  12443535 gcaatcacggccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaatttcatg 12443634  T
Q  101 t 101  Q
    |    
T  12443635 t 12443635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 12273051 - 12273141
Alignment:
Q  11 ccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  12273051 ccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccagaggtaaaattgaaatttcatgt 12273141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 23698442 - 23698532
Alignment:
Q  11 ccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  23698442 ccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaatttcatgt 23698532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 1425210 - 1425310
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  1425210 gcaatcactgccaaacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaatttcatg 1425309  T
Q  101 t 101  Q
    |    
T  1425310 t 1425310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 38955943 - 38955843
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  38955943 gcaatcactgccaaacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaatttcatg 38955844  T
Q  101 t 101  Q
    |    
T  38955843 t 38955843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 23663702 - 23663800
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcat 99  Q
    ||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||    
T  23663702 gcaatcactgccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaaaggtaaaattggaatttcat 23663800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 2266721 - 2266632
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  2266721 cacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaatttggaatttcatgt 2266632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 44407025 - 44407114
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  44407025 cacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaatttggaatttcatgt 44407114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 99
Target Start/End: Original strand, 22915556 - 22915644
Alignment:
Q  11 ccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcat 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||    
T  22915556 ccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaactcaggggtaaaattggaatttcat 22915644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 38845468 - 38845556
Alignment:
Q  13 acacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  38845468 acacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaatttggaatttcatgt 38845556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 8316786 - 8316876
Alignment:
Q  11 ccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || |||||| ||||| |||||||||    
T  8316786 ccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacacaggggtaacattgatatttcatgt 8316876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 11674923 - 11674834
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||| ||| ||||||||||    
T  11674923 cacacatgaaattccaattttgcccttaagaagaggacaaaatattaaagaaagaattggaaacccaggggtaaatttggaatttcatgt 11674834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 36325463 - 36325374
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  36325463 cacacatgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaatttggaatttcatgt 36325374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 40775818 - 40775907
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  40775818 cacacatgaaattacaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaatttggaatttcatgt 40775907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 3041624 - 3041713
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||| || ||||||| ||| ||||||||||    
T  3041624 cacacataaaattccaattttgaccttaagaagaggacaaaatattgaagaaagaattggaaacacaggggtaaatttggaatttcatgt 3041713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 31873051 - 31873237
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctctt-aagaagaggacaaaatattgaagaaagaattggaaacccatggg------taaaattgaaa 93  Q
    ||||||||  |||||||||||||||||||||| | ||| |||||||||| | || || |||||||||||||||||||||||||      |||||||| ||    
T  31873051 gcaatcactgccacacatgaaattccaatttttccctttaagaagaggaaataagatggaagaaagaattggaaacccatgggtaaaaataaaattggaa 31873150  T
Q  94 tttcatgtatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaa 181  Q
    |||||||  || ||||||||| || |||||||||||| |||| |   |||||||||||||| ||||  || |||||||||| |||||||    
T  31873151 tttcatg--tggcaatgattgccacgtcatcaaattagtgatgtagcagtgattaagtgggaagaggaacaaaattttaaatgattaaa 31873237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 191
Target Start/End: Original strand, 1425319 - 1425370
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatgtaggg 191  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||| ||||    
T  1425319 agtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaggg 1425370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 23663811 - 23663857
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  23663811 agtgattaagtggggagagggacgaaattttaaatgattaaacaatg 23663857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 23698541 - 23698587
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  23698541 agtgattaagtggggagagggacgaaattttaaatgattaaacaatg 23698587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 38862749 - 38862703
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  38862749 agtgattaagtggggagagggacgaaattttaaatgattaaacaatg 38862703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 2266623 - 2266583
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  2266623 agtgattaagtggggagagggacgaaattttaaacgattaa 2266583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 12199216 - 12199256
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  12199216 agtgattaagtggggagagagacgaaattttaaatgattaa 12199256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 12443644 - 12443684
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  12443644 agtgattaagtggggagagagacgaaattttaaatgattaa 12443684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 8316885 - 8316931
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||||||||||||||||  |||||||||||||| ||||||||||||    
T  8316885 agtgattaagtggggagatggacgaaattttaaatgattaaacaatg 8316931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 12273150 - 12273196
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    |||||||||||||| |||| |||||||||||||| ||||||||||||    
T  12273150 agtgattaagtgggaagagggacgaaattttaaatgattaaacaatg 12273196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 22915655 - 22915701
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||||||    
T  22915655 agtgattaagtggggagagggacggaattttaaatgattaaacaatg 22915701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 3041722 - 3041762
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||||||||||||| |||||||||||||| ||||||    
T  3041722 agtgattaagtggggagagggacgaaattttaaatgattaa 3041762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 36325365 - 36325325
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||||||||||||| |||||||||||||| ||||||    
T  36325365 agtgattaagtggggagagggacgaaattttaaatgattaa 36325325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 38845565 - 38845605
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||||||||||||| |||||||||||||| ||||||    
T  38845565 agtgattaagtggggagagggacgaaattttaaatgattaa 38845605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 40775916 - 40775956
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||||||||||||| |||||||||||||| ||||||    
T  40775916 agtgattaagtggggagagggacgaaattttaaatgattaa 40775956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 44407123 - 44407163
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||||||||||||| |||||||||||||| ||||||    
T  44407123 agtgattaagtggggagagggacgaaattttaaatgattaa 44407163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 34685518 - 34685455
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaac 75  Q
    |||| ||||||||| |||||| |  ||||||||||||||||||||| |||||| |||| |||||    
T  34685518 cacatatgaaattctaatttttcctttaagaagaggacaaaatattaaagaaaaaattagaaac 34685455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 191
Target Start/End: Complemental strand, 38955834 - 38955783
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatgtaggg 191  Q
    |||||||||||| |||||| || ||||||||||| |||||||||||| ||||    
T  38955834 agtgattaagtgaggagagggatgaaattttaaatgattaaacaatgcaggg 38955783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 24085905 - 24085864
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaa 181  Q
    ||||||||||||||||||| ||| ||||||||| ||||||||    
T  24085905 agtgattaagtggggagagggacaaaattttaagcgattaaa 24085864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 35449875 - 35449915
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||| ||||||||| |||||||||||||| ||||||    
T  35449875 agtgattaaatggggagagggacgaaattttaaatgattaa 35449915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 69236 - 69050
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||    
T  69236 gcaatcactaccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacctaggggtaaaattggaatttcatg 69137  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    |||| || | ||||  | |||||||||||| |||  ||  ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  69136 tatggcagttattgcaacgtcatcaaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatg 69050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 2414 - 2228
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||| |||||||||    
T  2414 gcaatcactgccacacatgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattgaaaatccaagggtaaaattggaatttcatg 2315  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    | |||| ||||||| || |||||||||||| ||| |||  ||||||||||||||||||| ||| |||||||||| ||||||| ||||    
T  2314 tgtgacgatgattgccacgtcatcaaattattgacatggcagtgattaagtggggagagggacaaaattttaaatgattaaataatg 2228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 37720 - 37905
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||   | ||||||||||| |||||||||    
T  37720 gcaatcactgccacacatgaaattccaattttgcccttaagaagagaacaaaatattgaagaaagaattggaaatttaggggtaaaattggaatttcatg 37819  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggggagagagacgaaattttaaacgattaaacaat 185  Q
    | ||||| |||||| || |||||||||||| |||  ||  ||||||||||||||||||| |||||||||||||| |||||||||||    
T  37820 tgtgacagtgattgccacgtcatcaaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaat 37905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 14586 - 14739
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    |||||||| |||||||||||||| |||||||||| ||||||||||| |||  |||||||||||||||||||||||||| ||||||||||| |||||||||    
T  14586 gcaatcactaccacacatgaaataccaattttgcccttaagaagagaacattatattgaagaaagaattggaaacccaggggtaaaattggaatttcatg 14685  T
Q  101 tatgacaatgattgtcaggtcatcaaatta-tgatatgatagtgattaagtggg 153  Q
    ||||||| |||||| || |||||||||||| ||| |||  ||||||||||||||    
T  14686 tatgacagtgattgccacgtcatcaaattagtgacatggcagtgattaagtggg 14739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 21137 - 21226
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21137 cacacatgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattgaaatttcatgt 21226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 21235 - 21275
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||||||||||||| |||| ||||||||| ||||||    
T  21235 agtgattaagtggggagagggacggaattttaaatgattaa 21275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 139912 - 139812
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  ||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  139912 gcaatcactgccaaacatgaaatttcaattttgctcttaagaagaggataaaatattgaagaaagaattggaaacccaggggtaaaattggaatttcatg 139813  T
Q  101 t 101  Q
    |    
T  139812 t 139812  T

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Target: scaffold0020; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 185
Target Start/End: Complemental strand, 139803 - 139758
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaat 185  Q
    ||||||||||||||||||| |||||||||||||| |||||| ||||    
T  139803 agtgattaagtggggagagggacgaaattttaaatgattaatcaat 139758  T

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Target: scaffold0559 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0559
Description:

Target: scaffold0559; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 1462 - 1373
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  1462 cacacatgaaattacaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaatttggaatttcatgt 1373  T

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Target: scaffold0559; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 1364 - 1324
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||||||||||||| |||||||||||||| ||||||    
T  1364 agtgattaagtggggagagggacgaaattttaaatgattaa 1324  T

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Target: scaffold0024 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 141762 - 141851
Alignment:
Q  12 cacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatgt 101  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  141762 cacacataaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaatttggaatttcatgt 141851  T

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Target: scaffold0024; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 141860 - 141900
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||||||||||||| |||||||||||||| ||||||    
T  141860 agtgattaagtggggagagggacgaaattttaaatgattaa 141900  T

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Target: scaffold0007 (Bit Score: 69; Significance: 5e-31; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 2009 - 1909
Alignment:
Q  1 gcaatcacaaccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattgaaatttcatg 100  Q
    ||||||||  |||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||    
T  2009 gcaatcactgccacacatgaaatttcaatttttcccttaagaagaggacaaaatattgaagaaagaattggaaacctaggggtaaaattggaatttcatg 1910  T
Q  101 t 101  Q
    |    
T  1909 t 1909  T

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Target: scaffold0007; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 1900 - 1854
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaaacaatg 186  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  1900 agtgattaagtggggagagggacgaaattttaaatgattaaacaatg 1854  T

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Target: scaffold0347 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 180
Target Start/End: Complemental strand, 13741 - 13700
Alignment:
Q  139 tagtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    |||||||||||||||||||| |||||||| ||||| ||||||    
T  13741 tagtgattaagtggggagagggacgaaatcttaaatgattaa 13700  T

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Target: scaffold0347; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 14562 - 14602
Alignment:
Q  140 agtgattaagtggggagagagacgaaattttaaacgattaa 180  Q
    ||||||||||||||||||| |||||||| ||||| ||||||    
T  14562 agtgattaagtggggagagggacgaaatcttaaatgattaa 14602  T

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