View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7433_high_7 (Length: 391)
Name: NF7433_high_7
Description: NF7433
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7433_high_7 |
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Alignment Details
Target: chr2 (Bit Score: 294; Significance: 1e-165; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 12 - 376
Target Start/End: Original strand, 37798192 - 37798552
Alignment:
| Q |
12 |
aacctgtgggataccgtggtggaagcaccggagtgccaatgactttggtttcggtgaattccaaaaccnnnnnnnnnnnnnntcccttatgtttgacaag |
111 |
Q |
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| T |
37798192 |
aacctgtgggataccatggtggacgcaccggagtgccaatgactttggtttcagtgaattccaaaaccaagaaaaaaat---tcccttat-tttgacaag |
37798287 |
T |
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| Q |
112 |
gaatgtacttatcacatgcaatttggatttaaatgagaatttgaaatttttgcagtattttttctttgcacattaactattacgtagacaaacttattat |
211 |
Q |
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| T |
37798288 |
gaatgtacttatcacatgcaatttggatttaaatgagaatttgaaatttttgcagtattttttctttgcacattaactattacgtagacaaacttattat |
37798387 |
T |
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| Q |
212 |
tacaatataacatgtttaagcacttgcataaaagcttgagaggcccaggtaacttactagcttattcaaagcctttctaattaattgaatatgtaagctt |
311 |
Q |
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| T |
37798388 |
tacaatataacatgtttaagcacttgcataaaaacttgagaggcccaggtaacttactagcttattcaaagcctttctaattaattgaatatgtaagctt |
37798487 |
T |
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| Q |
312 |
tctaaggtagtgttatataatgaaaacattctgatgctagttttctaatgaaaacgttcatagtg |
376 |
Q |
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| T |
37798488 |
tctaaggtagtgttatataatgaaaacattctgatgctagttttctaatgaaaacgttcatagtg |
37798552 |
T |
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