View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7433_low_3 (Length: 567)

Name: NF7433_low_3
Description: NF7433
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7433_low_3
NF7433_low_3
[»] chr4 (26 HSPs)
chr4 (10-277)||(11847633-11847900)
chr4 (341-551)||(11847964-11848174)
chr4 (10-259)||(15407666-15407914)
chr4 (341-551)||(8045827-8046030)
chr4 (64-273)||(14486241-14486449)
chr4 (23-253)||(8046117-8046346)
chr4 (10-246)||(16147123-16147357)
chr4 (93-250)||(27905876-27906032)
chr4 (23-227)||(53483245-53483448)
chr4 (51-253)||(13888210-13888412)
chr4 (472-546)||(53483687-53483760)
chr4 (51-253)||(13887353-13887555)
chr4 (74-253)||(8834486-8834665)
chr4 (51-246)||(15307688-15307883)
chr4 (490-546)||(15408139-15408195)
chr4 (51-246)||(15244783-15244978)
chr4 (489-555)||(13888641-13888707)
chr4 (510-555)||(15747547-15747592)
chr4 (489-545)||(8834895-8834951)
chr4 (51-106)||(8834443-8834498)
chr4 (489-555)||(15245215-15245281)
chr4 (491-543)||(14486661-14486713)
chr4 (489-540)||(22724691-22724742)
chr4 (515-545)||(15069781-15069811)
chr4 (515-545)||(15076381-15076411)
chr4 (489-555)||(15308120-15308186)
[»] chr8 (27 HSPs)
chr8 (10-273)||(14056829-14057090)
chr8 (23-273)||(25111518-25111766)
chr8 (23-227)||(17054134-17054336)
chr8 (344-551)||(23866475-23866675)
chr8 (341-546)||(44477480-44477678)
chr8 (341-546)||(44492638-44492836)
chr8 (51-273)||(18613841-18614062)
chr8 (23-227)||(23866155-23866357)
chr8 (341-543)||(8727735-8727931)
chr8 (16-198)||(24321010-24321191)
chr8 (130-273)||(29643652-29643795)
chr8 (465-551)||(17054566-17054651)
chr8 (52-253)||(21839971-21840172)
chr8 (52-253)||(21931267-21931468)
chr8 (361-448)||(27940946-27941032)
chr8 (167-253)||(19750235-19750321)
chr8 (489-555)||(23482043-23482109)
chr8 (489-545)||(18614271-18614327)
chr8 (489-545)||(39364919-39364975)
chr8 (491-545)||(29643386-29643440)
chr8 (490-551)||(14056558-14056619)
chr8 (490-551)||(25111976-25112037)
chr8 (491-546)||(24320670-24320725)
chr8 (221-277)||(8727995-8728050)
chr8 (489-545)||(21931696-21931752)
chr8 (221-253)||(44477362-44477394)
chr8 (221-253)||(44492520-44492552)
[»] scaffold0026 (4 HSPs)
scaffold0026 (341-551)||(11845-12049)
scaffold0026 (10-277)||(12113-12376)
scaffold0026 (341-546)||(111543-111741)
scaffold0026 (221-253)||(111425-111457)
[»] chr6 (54 HSPs)
chr6 (341-545)||(23057795-23057993)
chr6 (341-551)||(29614141-29614345)
chr6 (23-227)||(12167906-12168108)
chr6 (23-227)||(19286815-19287017)
chr6 (10-273)||(24513110-24513370)
chr6 (60-273)||(9187072-9187284)
chr6 (23-227)||(19786179-19786381)
chr6 (23-227)||(19877999-19878201)
chr6 (23-227)||(19883775-19883977)
chr6 (23-227)||(25470013-25470216)
chr6 (10-244)||(18799968-18800200)
chr6 (11-277)||(29614409-29614673)
chr6 (341-555)||(23839055-23839263)
chr6 (92-223)||(19300083-19300213)
chr6 (341-546)||(10986180-10986379)
chr6 (341-545)||(4477714-4477912)
chr6 (343-551)||(18800296-18800498)
chr6 (23-249)||(34640275-34640501)
chr6 (23-249)||(34646949-34647175)
chr6 (72-246)||(11288962-11289136)
chr6 (405-551)||(930090-930229)
chr6 (72-253)||(31252012-31252193)
chr6 (10-198)||(20008287-20008474)
chr6 (51-253)||(19471621-19471822)
chr6 (72-198)||(9099410-9099536)
chr6 (51-273)||(25396741-25396962)
chr6 (72-198)||(29097455-29097581)
chr6 (348-551)||(19785864-19786057)
chr6 (16-198)||(21364817-21364998)
chr6 (16-198)||(23968799-23968980)
chr6 (465-551)||(12168338-12168423)
chr6 (73-251)||(15458081-15458258)
chr6 (73-251)||(15464676-15464853)
chr6 (465-551)||(19287247-19287332)
chr6 (465-551)||(19878431-19878516)
chr6 (465-546)||(34639986-34640067)
chr6 (465-551)||(19884207-19884292)
chr6 (341-458)||(21565294-21565410)
chr6 (159-244)||(21565504-21565589)
chr6 (485-546)||(34646660-34646721)
chr6 (500-546)||(25469704-25469750)
chr6 (490-551)||(24512838-24512899)
chr6 (493-545)||(9187498-9187550)
chr6 (489-545)||(25348486-25348542)
chr6 (489-543)||(25598643-25598697)
chr6 (10-102)||(21565627-21565717)
chr6 (511-555)||(24441673-24441717)
chr6 (489-545)||(25397172-25397228)
chr6 (511-555)||(29415547-29415591)
chr6 (511-545)||(18659450-18659484)
chr6 (205-253)||(2287055-2287103)
chr6 (221-253)||(4477596-4477628)
chr6 (489-545)||(19471335-19471391)
chr6 (518-546)||(28288509-28288537)
[»] scaffold0029 (4 HSPs)
scaffold0029 (341-551)||(111738-111943)
scaffold0029 (23-277)||(111444-111694)
scaffold0029 (67-227)||(91513-91672)
scaffold0029 (67-227)||(97239-97398)
[»] scaffold1773 (2 HSPs)
scaffold1773 (341-551)||(1036-1238)
scaffold1773 (23-250)||(721-947)
[»] scaffold0006 (2 HSPs)
scaffold0006 (341-551)||(50037-50239)
scaffold0006 (23-250)||(49722-49948)
[»] chr7 (50 HSPs)
chr7 (341-550)||(18873217-18873420)
chr7 (341-545)||(15168032-15168230)
chr7 (16-273)||(21231226-21231480)
chr7 (23-227)||(13006975-13007177)
chr7 (344-551)||(12709838-12710038)
chr7 (344-551)||(13122909-13123109)
chr7 (341-541)||(10895795-10895989)
chr7 (341-551)||(13743566-13743769)
chr7 (341-555)||(14422841-14423049)
chr7 (23-227)||(12590954-12591156)
chr7 (72-251)||(14319917-14320096)
chr7 (341-545)||(16009434-16009631)
chr7 (23-227)||(11383182-11383384)
chr7 (16-227)||(13743244-13743453)
chr7 (51-253)||(46625528-46625730)
chr7 (10-227)||(11389659-11389874)
chr7 (23-227)||(13123227-13123429)
chr7 (16-246)||(29181402-29181629)
chr7 (16-196)||(2966501-2966680)
chr7 (23-227)||(12710156-12710358)
chr7 (67-246)||(16090659-16090837)
chr7 (51-273)||(13664500-13664720)
chr7 (72-251)||(31154984-31155163)
chr7 (348-551)||(12590638-12590832)
chr7 (16-227)||(3857676-3857884)
chr7 (343-543)||(16677152-16677348)
chr7 (343-543)||(17651388-17651584)
chr7 (151-251)||(14230449-14230549)
chr7 (465-551)||(13007407-13007492)
chr7 (92-273)||(13679103-13679283)
chr7 (92-244)||(16676903-16677055)
chr7 (92-244)||(17651139-17651291)
chr7 (16-227)||(2464899-2465108)
chr7 (67-198)||(20906799-20906930)
chr7 (49-231)||(20311359-20311540)
chr7 (490-545)||(11382871-11382926)
chr7 (490-545)||(11389348-11389403)
chr7 (490-551)||(21230954-21231015)
chr7 (490-546)||(20311051-20311107)
chr7 (510-555)||(831624-831669)
chr7 (510-555)||(1196804-1196849)
chr7 (510-555)||(34958578-34958623)
chr7 (489-545)||(13679492-13679548)
chr7 (491-546)||(2971254-2971309)
chr7 (491-546)||(20906461-20906516)
chr7 (515-545)||(11311083-11311113)
chr7 (221-277)||(10896053-10896108)
chr7 (221-277)||(15167913-15167968)
chr7 (221-277)||(18873098-18873153)
chr7 (489-545)||(46625961-46626017)
[»] chr5 (35 HSPs)
chr5 (341-550)||(22750998-22751201)
chr5 (341-551)||(38144531-38144734)
chr5 (23-227)||(23528173-23528375)
chr5 (341-545)||(28370055-28370252)
chr5 (341-545)||(19512243-19512441)
chr5 (72-251)||(34829674-34829853)
chr5 (72-198)||(24930267-24930393)
chr5 (16-198)||(19236435-19236616)
chr5 (16-198)||(22467315-22467496)
chr5 (16-198)||(22460691-22460872)
chr5 (51-254)||(18408228-18408428)
chr5 (72-246)||(20772561-20772733)
chr5 (348-550)||(23528497-23528690)
chr5 (67-231)||(22439054-22439218)
chr5 (16-246)||(28889628-28889856)
chr5 (16-246)||(28896332-28896560)
chr5 (16-246)||(28909580-28909808)
chr5 (16-246)||(28925158-28925386)
chr5 (16-246)||(28931272-28931500)
chr5 (16-246)||(28945975-28946203)
chr5 (72-246)||(20781336-20781508)
chr5 (489-545)||(18407944-18408000)
chr5 (490-546)||(22438747-22438803)
chr5 (489-555)||(23111190-23111256)
chr5 (72-196)||(20819811-20819934)
chr5 (72-196)||(20826911-20827034)
chr5 (491-546)||(19236900-19236955)
chr5 (517-546)||(17021913-17021942)
chr5 (74-107)||(20772370-20772403)
chr5 (74-107)||(20781145-20781178)
chr5 (493-546)||(22461158-22461211)
chr5 (493-546)||(22467782-22467835)
chr5 (511-555)||(8952031-8952075)
chr5 (221-253)||(19512125-19512157)
chr5 (221-277)||(22750879-22750934)
[»] chr3 (45 HSPs)
chr3 (341-545)||(14762758-14762956)
chr3 (341-543)||(20247791-20247987)
chr3 (16-259)||(24192488-24192731)
chr3 (341-543)||(38310802-38310998)
chr3 (23-227)||(41455408-41455610)
chr3 (23-227)||(10389757-10389959)
chr3 (23-227)||(10414846-10415048)
chr3 (23-227)||(10421516-10421718)
chr3 (346-543)||(24192817-24193009)
chr3 (23-227)||(24934139-24934341)
chr3 (23-273)||(16801731-16801980)
chr3 (361-545)||(9534205-9534382)
chr3 (65-273)||(13313161-13313368)
chr3 (92-273)||(13302505-13302685)
chr3 (10-246)||(14865374-14865608)
chr3 (65-273)||(13324053-13324260)
chr3 (60-273)||(17240778-17240989)
chr3 (341-546)||(23370505-23370704)
chr3 (72-198)||(19235407-19235533)
chr3 (77-254)||(18928837-18929014)
chr3 (67-198)||(17131316-17131447)
chr3 (18-198)||(12033783-12033963)
chr3 (465-551)||(41455092-41455177)
chr3 (349-546)||(24933828-24934016)
chr3 (74-227)||(55499416-55499569)
chr3 (341-458)||(55499185-55499301)
chr3 (486-551)||(16801462-16801526)
chr3 (489-545)||(18929244-18929300)
chr3 (489-545)||(17240513-17240569)
chr3 (23-102)||(55499561-55499639)
chr3 (491-546)||(13302240-13302295)
chr3 (491-546)||(13323787-13323842)
chr3 (491-546)||(12033444-12033499)
chr3 (491-546)||(13312896-13312951)
chr3 (491-546)||(17131732-17131787)
chr3 (511-546)||(23392819-23392854)
chr3 (491-546)||(51301589-51301644)
chr3 (510-546)||(2247649-2247685)
chr3 (221-253)||(9534067-9534099)
chr3 (527-555)||(10833299-10833327)
chr3 (221-277)||(14763020-14763075)
chr3 (205-253)||(16800747-16800795)
chr3 (221-277)||(20248043-20248098)
chr3 (221-277)||(38311062-38311117)
chr3 (511-555)||(52337946-52337990)
[»] scaffold0483 (1 HSPs)
scaffold0483 (23-273)||(11275-11522)
[»] scaffold0025 (2 HSPs)
scaffold0025 (23-244)||(14691-14911)
scaffold0025 (341-543)||(14398-14595)
[»] scaffold0924 (2 HSPs)
scaffold0924 (341-551)||(745-949)
scaffold0924 (23-253)||(1036-1265)
[»] scaffold0634 (2 HSPs)
scaffold0634 (64-277)||(3244-3455)
scaffold0634 (341-380)||(3519-3558)
[»] scaffold0107 (3 HSPs)
scaffold0107 (10-254)||(40812-41055)
scaffold0107 (490-551)||(40526-40587)
scaffold0107 (511-555)||(3905-3949)
[»] scaffold0235 (3 HSPs)
scaffold0235 (10-253)||(22878-23120)
scaffold0235 (150-273)||(15201-15323)
scaffold0235 (492-544)||(22594-22646)
[»] scaffold0456 (6 HSPs)
scaffold0456 (10-244)||(565-797)
scaffold0456 (10-244)||(7710-7942)
scaffold0456 (475-550)||(916-991)
scaffold0456 (475-550)||(8061-8136)
scaffold0456 (341-384)||(846-889)
scaffold0456 (341-384)||(7991-8034)
[»] chr1 (26 HSPs)
chr1 (51-273)||(18712368-18712588)
chr1 (341-555)||(20437014-20437222)
chr1 (92-223)||(19961779-19961909)
chr1 (16-198)||(20851472-20851653)
chr1 (16-198)||(20858099-20858280)
chr1 (72-198)||(20045290-20045416)
chr1 (16-198)||(21705810-21705991)
chr1 (16-198)||(21710353-21710534)
chr1 (465-551)||(41112010-41112095)
chr1 (489-545)||(32651571-32651627)
chr1 (489-545)||(18712798-18712854)
chr1 (490-545)||(19663517-19663572)
chr1 (51-191)||(22030094-22030234)
chr1 (150-254)||(11157760-11157863)
chr1 (489-545)||(20805320-20805376)
chr1 (490-545)||(11158093-11158148)
chr1 (489-543)||(10811785-10811839)
chr1 (491-546)||(20851132-20851187)
chr1 (491-546)||(20857759-20857814)
chr1 (491-546)||(21706276-21706331)
chr1 (491-546)||(21710818-21710873)
chr1 (515-545)||(24476350-24476380)
chr1 (515-545)||(25091418-25091448)
chr1 (511-544)||(18271338-18271371)
chr1 (511-544)||(18275992-18276025)
chr1 (221-273)||(32651310-32651361)
[»] scaffold0020 (2 HSPs)
scaffold0020 (61-273)||(102194-102405)
scaffold0020 (489-545)||(101928-101984)
[»] scaffold0117 (4 HSPs)
scaffold0117 (341-551)||(1892-2095)
scaffold0117 (341-551)||(8569-8772)
scaffold0117 (25-227)||(8886-9087)
scaffold0117 (126-227)||(2209-2310)
[»] scaffold0034 (1 HSPs)
scaffold0034 (72-251)||(72873-73052)
[»] chr2 (37 HSPs)
chr2 (341-555)||(6483575-6483782)
chr2 (341-555)||(6487042-6487249)
chr2 (72-251)||(27208007-27208186)
chr2 (341-545)||(19661454-19661651)
chr2 (72-248)||(27210345-27210521)
chr2 (54-273)||(23063256-23063474)
chr2 (72-250)||(26884797-26884974)
chr2 (72-251)||(23168589-23168768)
chr2 (72-251)||(23579846-23580025)
chr2 (10-244)||(23101755-23101988)
chr2 (343-551)||(26583687-26583887)
chr2 (23-227)||(5706334-5706536)
chr2 (16-198)||(10111-10292)
chr2 (49-251)||(23264709-23264910)
chr2 (65-253)||(24661159-24661346)
chr2 (94-198)||(25181260-25181364)
chr2 (49-251)||(21907923-21908125)
chr2 (92-244)||(26583438-26583590)
chr2 (341-458)||(23089137-23089253)
chr2 (159-244)||(23089347-23089432)
chr2 (472-546)||(5706023-5706096)
chr2 (341-458)||(23101545-23101661)
chr2 (489-545)||(21908358-21908414)
chr2 (489-545)||(23265141-23265197)
chr2 (489-545)||(23280209-23280265)
chr2 (341-459)||(23878865-23878982)
chr2 (16-82)||(26583383-26583448)
chr2 (159-244)||(23878686-23878771)
chr2 (10-102)||(23089470-23089560)
chr2 (489-545)||(24661576-24661632)
chr2 (491-546)||(10577-10632)
chr2 (491-546)||(25180929-25180984)
chr2 (485-543)||(23879002-23879060)
chr2 (485-545)||(23101463-23101524)
chr2 (221-253)||(6483457-6483489)
chr2 (221-253)||(6486924-6486956)
chr2 (474-546)||(26885166-26885237)
[»] scaffold0090 (2 HSPs)
scaffold0090 (64-251)||(17750-17936)
scaffold0090 (342-551)||(18026-18230)
[»] scaffold0058 (2 HSPs)
scaffold0058 (341-551)||(149-351)
scaffold0058 (202-253)||(11-62)
[»] scaffold0053 (2 HSPs)
scaffold0053 (10-246)||(79783-80017)
scaffold0053 (51-273)||(81480-81701)
[»] scaffold0247 (2 HSPs)
scaffold0247 (343-551)||(11200-11402)
scaffold0247 (159-244)||(11019-11104)
[»] scaffold1469 (1 HSPs)
scaffold1469 (94-273)||(968-1146)
[»] scaffold0154 (2 HSPs)
scaffold0154 (93-244)||(30465-30616)
scaffold0154 (471-551)||(30838-30918)
[»] scaffold0139 (2 HSPs)
scaffold0139 (51-273)||(15264-15485)
scaffold0139 (490-545)||(14997-15052)
[»] scaffold0553 (1 HSPs)
scaffold0553 (341-546)||(10195-10394)
[»] scaffold0544 (1 HSPs)
scaffold0544 (341-546)||(1525-1724)
[»] scaffold0453 (1 HSPs)
scaffold0453 (72-251)||(10837-11016)
[»] scaffold0261 (1 HSPs)
scaffold0261 (60-251)||(23857-24047)
[»] scaffold0138 (2 HSPs)
scaffold0138 (51-246)||(1386-1580)
scaffold0138 (489-555)||(12296-12362)
[»] scaffold0077 (2 HSPs)
scaffold0077 (10-244)||(3914-4147)
scaffold0077 (341-458)||(3704-3820)
[»] scaffold0461 (2 HSPs)
scaffold0461 (51-253)||(293-494)
scaffold0461 (489-545)||(8-64)
[»] scaffold0222 (2 HSPs)
scaffold0222 (51-273)||(16391-16609)
scaffold0222 (489-545)||(16819-16875)
[»] scaffold0124 (2 HSPs)
scaffold0124 (51-253)||(34562-34763)
scaffold0124 (490-545)||(34276-34331)
[»] scaffold0001 (3 HSPs)
scaffold0001 (72-250)||(493315-493492)
scaffold0001 (51-194)||(525332-525475)
scaffold0001 (474-546)||(493028-493099)
[»] scaffold0023 (1 HSPs)
scaffold0023 (23-198)||(134981-135155)
[»] scaffold0206 (1 HSPs)
scaffold0206 (72-250)||(18210-18386)
[»] scaffold0348 (2 HSPs)
scaffold0348 (72-236)||(8949-9112)
scaffold0348 (491-546)||(9336-9391)
[»] scaffold0004 (4 HSPs)
scaffold0004 (51-253)||(128943-129145)
scaffold0004 (94-251)||(116508-116665)
scaffold0004 (489-545)||(116895-116951)
scaffold0004 (511-544)||(60441-60474)
[»] scaffold0796 (3 HSPs)
scaffold0796 (137-227)||(2043-2133)
scaffold0796 (349-551)||(1727-1920)
scaffold0796 (349-551)||(5750-5943)
[»] scaffold0232 (1 HSPs)
scaffold0232 (92-273)||(18697-18876)
[»] scaffold0085 (1 HSPs)
scaffold0085 (16-198)||(4012-4192)
[»] scaffold0028 (2 HSPs)
scaffold0028 (51-253)||(1636-1838)
scaffold0028 (92-216)||(65684-65809)
[»] scaffold2054 (2 HSPs)
scaffold2054 (94-198)||(321-425)
scaffold2054 (493-551)||(717-775)
[»] scaffold0384 (1 HSPs)
scaffold0384 (72-246)||(16355-16525)
[»] scaffold0094 (1 HSPs)
scaffold0094 (52-273)||(51814-52035)
[»] scaffold0031 (2 HSPs)
scaffold0031 (54-253)||(121473-121672)
scaffold0031 (54-251)||(132350-132547)
[»] scaffold0335 (2 HSPs)
scaffold0335 (51-253)||(2912-3114)
scaffold0335 (489-545)||(2628-2684)
[»] scaffold0317 (2 HSPs)
scaffold0317 (92-273)||(996-1176)
scaffold0317 (489-545)||(1385-1441)
[»] scaffold0249 (1 HSPs)
scaffold0249 (73-198)||(14232-14357)
[»] scaffold0131 (1 HSPs)
scaffold0131 (72-246)||(591-762)
[»] scaffold0129 (1 HSPs)
scaffold0129 (472-551)||(45269-45347)
[»] scaffold0476 (2 HSPs)
scaffold0476 (159-244)||(3586-3671)
scaffold0476 (343-458)||(3375-3490)
[»] scaffold0169 (1 HSPs)
scaffold0169 (51-253)||(6537-6742)
[»] scaffold0099 (1 HSPs)
scaffold0099 (94-191)||(12551-12650)
[»] scaffold1461 (1 HSPs)
scaffold1461 (52-126)||(1701-1775)
[»] scaffold0310 (1 HSPs)
scaffold0310 (490-546)||(17643-17699)
[»] scaffold0019 (1 HSPs)
scaffold0019 (490-546)||(135473-135529)
[»] scaffold0146 (1 HSPs)
scaffold0146 (489-545)||(13631-13687)
[»] scaffold0720 (1 HSPs)
scaffold0720 (72-142)||(3665-3735)
[»] scaffold0096 (1 HSPs)
scaffold0096 (489-555)||(39497-39563)
[»] scaffold0815 (1 HSPs)
scaffold0815 (494-551)||(1453-1510)
[»] scaffold0127 (1 HSPs)
scaffold0127 (491-546)||(10239-10294)
[»] scaffold1318 (1 HSPs)
scaffold1318 (491-545)||(1913-1967)
[»] scaffold0790 (1 HSPs)
scaffold0790 (517-551)||(5480-5514)
[»] scaffold0600 (1 HSPs)
scaffold0600 (203-253)||(454-504)
[»] scaffold0429 (1 HSPs)
scaffold0429 (511-555)||(1990-2034)


Alignment Details
Target: chr4 (Bit Score: 244; Significance: 1e-135; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 10 - 277
Target Start/End: Original strand, 11847633 - 11847900
Alignment:
Q  10 gctcgttcactgctcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgc 109  Q
    ||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  11847633 gctcgctcactgttcgcttaagcgaacaggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagcgacgggtagctcgcttaagcgaccgc 11847732  T
Q  110 tcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtt 209  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11847733 tcatctgggcagggtaaaaacctacaatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtt 11847832  T
Q  210 tacaggtcctatatacaattagacatctaaaggaacacaaaacagtcatccaccaacaacaattacag 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  11847833 tacaggtcctatatacaattagacatctaaaggaacacaaaacagtcatcaaccaacaacaattacag 11847900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 341 - 551
Target Start/End: Original strand, 11847964 - 11848174
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatca 440  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11847964 tatgatcacagcaacaacaaagattaagttttcattctgaacattatattataaaaggattaacatgatcattacccattcctcttcagaatcgtcatca 11848063  T
Q  441 aaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcaccctta 540  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11848064 aaccctaaccctcaattgattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcaccctta 11848163  T
Q  541 ccttagttttg 551  Q
    |||||||||||    
T  11848164 ccttagttttg 11848174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 10 - 259
Target Start/End: Original strand, 15407666 - 15407914
Alignment:
Q  10 gctcgttcactgctcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgc 109  Q
    ||||| |||||| |||||||||||||| | |||||||| ||| |||||  |||||||||||||||| |||||| ||||||| | ||||||||||||||      
T  15407666 gctcgctcactgttcgcttaagcgaactgacaaaatcgcatt-ctgggcagcttgcttgaatgctcacttaagcgacgggtcgttcgcttaagcgaccat 15407764  T
Q  110 tcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtt 209  Q
    |||||||||||| | |||||||||||  ||||||| ||| ||||||||||||||||||||| |||||||||||||||||||| |||||| | ||||||||    
T  15407765 tcatctgggcagtgcaaaaacctacgggttcagacctcttctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttccagcagatgtt 15407864  T
Q  210 tacaggtcctatatacaattagacatctaaaggaacacaaaacagtcatc 259  Q
    ||||||||||||| |||| ||| |||| ||||||||||||||||| ||||    
T  15407865 tacaggtcctatacacaactaggcatcgaaaggaacacaaaacaggcatc 15407914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 341 - 551
Target Start/End: Complemental strand, 8046030 - 8045827
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatca 440  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||| ||| ||||||||| | |||||||||  || |||    
T  8046030 tatgatcacagcaacaacaaggattaagttttcattctgaacattatattacaagagaattaacattatctttacccatttcccttcagaattctcgtca 8045931  T
Q  441 aaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcaccctta 540  Q
    |||||||||||||||||||      |||| ||||||||||| | |||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||    
T  8045930 aaccctaaccctcaattta------ttttccaaaactatgcaattaggtcaa-tttcagaaattatagattatgattatcgagagatagtctcaccctta 8045838  T
Q  541 ccttagttttg 551  Q
    |||||||||||    
T  8045837 ccttagttttg 8045827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 64 - 273
Target Start/End: Original strand, 14486241 - 14486449
Alignment:
Q  64 gcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaaaaac 163  Q
    ||||||||||||||||||| || |||| | |||||||||||||| ||||||||||||||| |||||||||||  ||||||| ||| ||||||||||||||    
T  14486241 gcttgaatgctcgcttaagcgatgggtcgttcgcttaagcgaccactcatctgggcagggcaaaaacctacgggttcagacctcttctcactccaaaaac 14486340  T
Q  164 ccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaaaacagtcatccacc 263  Q
     |||||| ||||||||||||| |||||||| |||| |||||||||||||||||   ||  |||| |||||||||||||||||||||||||| ||| || |    
T  14486341 tcaattttaatcccctgatcaaccaaaatgatttccaacagatgtttacaggtttaatgcacaactagacatctaaaggaacacaaaacagacat-caac 14486439  T
Q  264 aacaacaatt 273  Q
    ||||||||||    
T  14486440 aacaacaatt 14486449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 23 - 253
Target Start/End: Complemental strand, 8046346 - 8046117
Alignment:
Q  23 tcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagg 122  Q
    ||||||||||||||||| ||||||| ||| || ||  | || |||||||||||||||||| ||||| |   ||||||||||||||  ||||||||||||     
T  8046346 tcgcttaagcgaacgggtaaaatcgcatt-ctaggcagtttacttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggcagt 8046248  T
Q  123 gtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctata 222  Q
    | ||||||||||| |||||||| ||||||||||||||||| ||||||| ||||||| ||||||||||||||||||| | |||||||||||||||||||||    
T  8046247 gcaaaaacctacggtttcagacctctcctcactccaaaaatccaattttaatcccccgatcacccaaaatgttttccagcagatgtttacaggtcctata 8046148  T
Q  223 tacaattagacatctaaaggaacacaaaaca 253  Q
    ||||| ||  ||||||| | |||||| ||||    
T  8046147 tacaactaagcatctaaggaaacacagaaca 8046117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 10 - 246
Target Start/End: Complemental strand, 16147357 - 16147123
Alignment:
Q  10 gctcgttcactgctcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgc 109  Q
    ||||| |||||| ||||||||||||||||| ||||||  ||| |||||  |||  | |||||| ||||||||| |||||||   |||||||||||||| |    
T  16147357 gctcgctcactgttcgcttaagcgaacgggtaaaatctaattcctgggcagcta-catgaatgttcgcttaagcgacgggtgcttcgcttaagcgaccac 16147259  T
Q  110 tcatctgggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgt 208  Q
    |||||||||||||||||||   |||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||  | | ||||    
T  16147258 tcatctgggcagggtaaaagt-tacgattttcagacttctcctcactccaaaaacccagttttaatcccctgatcacccaaaacgttttc-cagaaatgt 16147161  T
Q  209 ttacaggtcctatatacaattagacatctaaaggaaca 246  Q
    ||||| |||||||||||||| ||||||| |||||||||    
T  16147160 ttacaagtcctatatacaatcagacatcaaaaggaaca 16147123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 93 - 250
Target Start/End: Original strand, 27905876 - 27906032
Alignment:
Q  93 ctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaat 192  Q
    ||||||||||||||| || ||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  27905876 ctcgcttaagcgaccacttatccgggcagggcaaaaacctacgatttcagacttctcctcactccaaaaacccaattttaatcccctgatcacccaaaac 27905975  T
Q  193 gttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaaa 250  Q
    |||||| | ||  ||||||||||||||||| |||| ||| |||| |||||||||||||    
T  27905976 gttttccagca-ttgtttacaggtcctatacacaactaggcatcgaaaggaacacaaa 27906032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 23 - 227
Target Start/End: Original strand, 53483245 - 53483448
Alignment:
Q  23 tcgcttaagcgaacgggcaaaa-tcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcag 121  Q
    |||||||||||||||||||||| ||| ||| |||||  |||||||||| |||||||||||| ||||| |   ||||||||||||||  || ||||| |||    
T  53483245 tcgcttaagcgaacgggcaaaaatcgcatt-ctgggcagcttgcttgactgctcgcttaagcgacggatgcttcgcttaagcgaccattcgtctggacag 53483343  T
Q  122 ggtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctat 221  Q
     | |||| |||||| ||||||||  || |||||||||||||| | |||| ||||||||||| ||||||||| | ||| ||||||||||||||||||| ||    
T  53483344 tgcaaaa-cctacggtttcagaccacttctcactccaaaaactccattttaatcccctgattacccaaaatatattccaacagatgtttacaggtccaat 53483442  T
Q  222 atacaa 227  Q
    ||||||    
T  53483443 atacaa 53483448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 51 - 253
Target Start/End: Original strand, 13888210 - 13888412
Alignment:
Q  51 ttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaac-ctacgatttcagacttctc 149  Q
    |||||||| ||||||||||||||||||||||| ||||||| | ||||||||||||||  |||||||||||| | |||||| ||  | ||||| ||   |     
T  13888210 ttctgggttgcttgcttgaatgctcgcttaagcgacgggtcgttcgcttaagcgaccattcatctgggcagtgcaaaaactctcgggtttcaaacccttt 13888309  T
Q  150 ctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaa 249  Q
     ||| ||| |||||||||||| ||||||||||||||||||||  | ||| || ||| |||||||||| |  |||| ||| || |||||||||||||| ||    
T  13888310 ttcattcc-aaaacccaattttaatcccctgatcacccaaaacatattccaaaagacgtttacaggttcagtatataataaggcatctaaaggaacataa 13888408  T
Q  250 aaca 253  Q
    ||||    
T  13888409 aaca 13888412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 472 - 546
Target Start/End: Original strand, 53483687 - 53483760
Alignment:
Q  472 aaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 546  Q
    |||||||| | | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53483687 aaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttag 53483760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 51 - 253
Target Start/End: Original strand, 13887353 - 13887555
Alignment:
Q  51 ttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaac-ctacgatttcagacttctc 149  Q
    |||||||| ||||||||||||||||||||||| ||| ||| | ||||||||||||||  |||||||||||| | |||||| ||  | ||||| ||   |     
T  13887353 ttctgggttgcttgcttgaatgctcgcttaagcgacaggtcgttcgcttaagcgaccattcatctgggcagtgcaaaaactctcgggtttcaaacccttt 13887452  T
Q  150 ctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaa 249  Q
     ||| ||| |||||||||||| |||||||||||||||||||| || ||| |  ||| ||||||||||    |||| ||| || |||||||||||||| ||    
T  13887453 ttcattcc-aaaacccaattttaatcccctgatcacccaaaacgtattccagaagacgtttacaggtttagtatataataaggcatctaaaggaacataa 13887551  T
Q  250 aaca 253  Q
    ||||    
T  13887552 aaca 13887555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 74 - 253
Target Start/End: Original strand, 8834486 - 8834665
Alignment:
Q  74 tcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaac-ctacgatttcagacttctcctcactccaaaaacccaatttca 172  Q
    ||||||||| ||||||| | ||||||||||||||  |||||||||||| | |||||| ||  | ||||| ||   |  ||| ||||||| |||||||| |    
T  8834486 tcgcttaagcgacgggtcgttcgcttaagcgaccattcatctgggcagtgcaaaaactctcgggtttcaaaccctttttcattccaaaa-cccaatttta 8834584  T
Q  173 atcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaaaaca 253  Q
    ||||||||||||||||||| || ||| |  |||||||||||||| |  || ||||| || |||||||||||||||||||||    
T  8834585 atcccctgatcacccaaaacgtattccagaagatgtttacaggttcattacacaataaggcatctaaaggaacacaaaaca 8834665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 51 - 246
Target Start/End: Original strand, 15307688 - 15307883
Alignment:
Q  51 ttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaac-ctacgatttcagacttctc 149  Q
    |||||||| ||||||||||||||||||||||| | | ||| | |||||||||||| |  |||||||||||| | |||||| ||  | ||||| ||   |     
T  15307688 ttctgggttgcttgcttgaatgctcgcttaagcgtcaggtcgttcgcttaagcgatcattcatctgggcagtgcaaaaactctcgggtttcaaacccttt 15307787  T
Q  150 ctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaaca 246  Q
     ||| ||||| | |||||||| |||||||||||||||||||| || ||| |  |||||||||||||| |  |||| ||| || ||||||||||||||    
T  15307788 ttcattccaata-cccaattttaatcccctgatcacccaaaacgtattccagaagatgtttacaggttcagtatataataaggcatctaaaggaaca 15307883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 490 - 546
Target Start/End: Original strand, 15408139 - 15408195
Alignment:
Q  490 caattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 546  Q
    |||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||    
T  15408139 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttag 15408195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 51 - 246
Target Start/End: Original strand, 15244783 - 15244978
Alignment:
Q  51 ttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaac-ctacgatttcagacttctc 149  Q
    ||||||||  ||||||||||| |||||||||| |||||||   ||||||||||||||  |||||||||||| | |||||| ||  | ||||| |    |     
T  15244783 ttctgggtttcttgcttgaattctcgcttaagcgacgggtcattcgcttaagcgaccattcatctgggcagtgcaaaaactctcgggtttcaaatccttt 15244882  T
Q  150 ctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaaca 246  Q
     ||| ||| |||||||||||| |||||||||||||||||||| || ||| |  |||||||||||||| |  |||| ||| || |||||||| |||||    
T  15244883 ttcattcc-aaaacccaattttaatcccctgatcacccaaaacgtattccagaagatgtttacaggttcagtatataataagccatctaaacgaaca 15244978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 489 - 555
Target Start/End: Original strand, 13888641 - 13888707
Alignment:
Q  489 tcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgatga 555  Q
    ||||||||||| ||||||| |||||||| |||||||| ||| ||||||||||||||| ||| |||||    
T  13888641 tcaattttcagaaattatacattatgatcattgagagttagcctcacccttaccttaatttagatga 13888707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 510 - 555
Target Start/End: Complemental strand, 15747592 - 15747547
Alignment:
Q  510 ttatgattattgagagatagtctcacccttaccttagttttgatga 555  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||    
T  15747592 ttataattattgagagttagtctcacccttaccttagttttgatga 15747547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 489 - 545
Target Start/End: Original strand, 8834895 - 8834951
Alignment:
Q  489 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 545  Q
    ||||||||||| ||||||| |||||||| |||||||| ||| |||||||||||||||    
T  8834895 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 8834951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 51 - 106
Target Start/End: Original strand, 8834443 - 8834498
Alignment:
Q  51 ttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgac 106  Q
    ||||||||  |||||||||||||||||||||| ||||||| | |||||||||||||    
T  8834443 ttctgggtttcttgcttgaatgctcgcttaagcgacgggtcgttcgcttaagcgac 8834498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 489 - 555
Target Start/End: Original strand, 15245215 - 15245281
Alignment:
Q  489 tcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgatga 555  Q
    ||||||||||| ||||||| |||| ||| |||||||| ||| ||||||||||||||| ||| |||||    
T  15245215 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttaccttaatttagatga 15245281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 491 - 543
Target Start/End: Original strand, 14486661 - 14486713
Alignment:
Q  491 aattttcaggaattatagattatgattattgagagatagtctcacccttacct 543  Q
    ||||||||| ||||||| |||||||| |||||  |||||||||||||||||||    
T  14486661 aattttcagaaattatatattatgatcattgaaggatagtctcacccttacct 14486713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 540
Target Start/End: Complemental strand, 22724742 - 22724691
Alignment:
Q  489 tcaattttcaggaattatagattatgattattgagagatagtctcaccctta 540  Q
    ||||||||||| |||| || | ||| ||||||||||||||||||||||||||    
T  22724742 tcaattttcagaaattctatactattattattgagagatagtctcaccctta 22724691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 515 - 545
Target Start/End: Original strand, 15069781 - 15069811
Alignment:
Q  515 attattgagagatagtctcacccttacctta 545  Q
    |||||||||||||||||||||||||||||||    
T  15069781 attattgagagatagtctcacccttacctta 15069811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 515 - 545
Target Start/End: Original strand, 15076381 - 15076411
Alignment:
Q  515 attattgagagatagtctcacccttacctta 545  Q
    |||||||||||||||||||||||||||||||    
T  15076381 attattgagagatagtctcacccttacctta 15076411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 555
Target Start/End: Original strand, 15308120 - 15308186
Alignment:
Q  489 tcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgatga 555  Q
    ||||||||||| ||||||| |||| ||| |||||||| ||| |||||||||| |||| ||| |||||    
T  15308120 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttaacttaatttagatga 15308186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 148; Significance: 8e-78; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 10 - 273
Target Start/End: Complemental strand, 14057090 - 14056829
Alignment:
Q  10 gctcgttcactgctcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgc 109  Q
    ||||| |||||| ||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||| ||||||| | ||||||||||||||      
T  14057090 gctcgctcactgttcgcttaagcgaacgggcaaaatcgtatt-ctgggcagcttgcttgaatgctcgcttaagcgacgggtcgttcgcttaagcgaccat 14056992  T
Q  110 tcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtt 209  Q
    |||||||||||| | |||||||||||  |||| || ||| ||||||||||||||||||||| |||||||||||||||||||| |||||| | ||||||||    
T  14056991 tcatctgggcagtgcaaaaacctacgggttcaaacctcttctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttccagcagatgtt 14056892  T
Q  210 tacaggtcctatatacaattagacatctaaaggaacacaaaacagtcatccaccaacaacaatt 273  Q
    ||||||||||||| |||| ||| |||||||||||||||||||||| ||| || |||||||||||    
T  14056891 tacaggtcctatacacaactaggcatctaaaggaacacaaaacaggcat-caacaacaacaatt 14056829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 23 - 273
Target Start/End: Original strand, 25111518 - 25111766
Alignment:
Q  23 tcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagg 122  Q
    ||||||||||||||||||||||||| ||| |||||  ||||||||||||||||||||||  ||||||| | ||||||||||||||  ||||||||||||     
T  25111518 tcgcttaagcgaacgggcaaaatcgcatt-ctgggcagcttgcttgaatgctcgcttaaacgacgggtcgttcgcttaagcgaccattcatctgggcagt 25111616  T
Q  123 gtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctata 222  Q
    | ||||||||||   |||| || ||| ||||||||||||||||||||| |||||||||||||||||||| |||||| | |||||||||||||||||||||    
T  25111617 gcaaaaacctacaggttcaaacctcttctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttccagcagatgtttacaggtcctata 25111716  T
Q  223 tacaattagacatctaaaggaacacaaaacagtcatccaccaacaacaatt 273  Q
     |||| ||  |||||||||||||||||||||| ||| || |||||||||||    
T  25111717 cacaactatgcatctaaaggaacacaaaacaggcat-caacaacaacaatt 25111766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 23 - 227
Target Start/End: Original strand, 17054134 - 17054336
Alignment:
Q  23 tcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagg 122  Q
    ||||||||||||||||| ||||||| ||| |||||  ||||||||||||||||||||||| ||||| ||  |||||||||||||| |||||||||||||     
T  17054134 tcgcttaagcgaacgggtaaaatcgcatt-ctgggcagcttgcttgaatgctcgcttaagcgacggatacttcgcttaagcgaccactcatctgggcagt 17054232  T
Q  123 gtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctata 222  Q
    | |||| |||||| |||||||| ||| |||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  17054233 gcaaaa-cctacggtttcagacctcttctcactccaaaaaccccattttaatcccctgatcacccaaaatgttttccaacagatgtttacaggtcctata 17054331  T
Q  223 tacaa 227  Q
    |||||    
T  17054332 tacaa 17054336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 344 - 551
Target Start/End: Original strand, 23866475 - 23866675
Alignment:
Q  344 gatcacagcaacaacaaagattaagttttcattctgaacattatattataag-aggattaacatgatcattacccattcctcttcagaatcgtcatcaaa 442  Q
    ||||| ||||||||||| ||||||||||  |||||||||||||||||| ||  || |||||||||||||||||||||| ||||||| |||| ||||||||    
T  23866475 gatcagagcaacaacaa-gattaagtttatattctgaacattatattacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaa 23866573  T
Q  443 ccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttacc 542  Q
    ||||||||||||||||      ||||| ||||||||||| | |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  23866574 ccctaaccctcaattt------attttccaaaactatgcaattaggtcaa-tttcaggaattataaattatgattattgagagatagtctcacccttacc 23866666  T
Q  543 ttagttttg 551  Q
    |||||||||    
T  23866667 ttagttttg 23866675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 341 - 546
Target Start/End: Original strand, 44477480 - 44477678
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatca 440  Q
    |||||||||| |||||  | |||||||||||||||||| |||||||  ||| || || ||||||||||||| |||||||||| || || |||| ||||||    
T  44477480 tatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattcccct-caaaatcatcatca 44477578  T
Q  441 aaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcaccctta 540  Q
    |||||||||||||||||||||||       ||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  44477579 aaccctaaccctcaatttattttc------caaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccctta 44477672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 341 - 546
Target Start/End: Original strand, 44492638 - 44492836
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatca 440  Q
    |||||||||| |||||  | |||||||||||||||||| |||||||  ||| || || ||||||||||||| |||||||||| || || |||| ||||||    
T  44492638 tatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattcccct-caaaatcatcatca 44492736  T
Q  441 aaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcaccctta 540  Q
    |||||||||||||||||||||||       ||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  44492737 aaccctaaccctcaatttattttc------caaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccctta 44492830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 51 - 273
Target Start/End: Original strand, 18613841 - 18614062
Alignment:
Q  51 ttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacga-tttcagacttctc 149  Q
    |||||||  ||||||||||||||||||||||| ||||| |   ||||||||||||||  |||||||||||| | |||||||||||  ||||| || |||     
T  18613841 ttctgggcagcttgcttgaatgctcgcttaagcgacggttttttcgcttaagcgaccattcatctgggcagtgcaaaaacctacgggtttcaaacctctt 18613940  T
Q  150 ctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaa 249  Q
    |||||||||||| |||||||| |||||||||||||||||||| |||||| |||||||||||||||||   ||| |||| |||||| ||||||||| ||||    
T  18613941 ctcactccaaaa-cccaattttaatcccctgatcacccaaaacgttttccaacagatgtttacaggtttaatacacaactagacacctaaaggaatacaa 18614039  T
Q  250 aacagtcatccaccaacaacaatt 273  Q
    ||||| ||| || |||||||||||    
T  18614040 aacaggcat-caacaacaacaatt 18614062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 23 - 227
Target Start/End: Original strand, 23866155 - 23866357
Alignment:
Q  23 tcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagg 122  Q
    ||||||||||||||||| | ||||| ||| |||||  | |  |||||||||||||||||| |||||||   ||||||||||||||  ||||||||||||     
T  23866155 tcgcttaagcgaacgggtagaatcgcatt-ctgggcagttaccttgaatgctcgcttaagcgacgggtgcttcgcttaagcgaccaatcatctgggcagt 23866253  T
Q  123 gtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctata 222  Q
    | |||| |||||| |||||||| ||| ||||||||||||||||||||| |||||||  |||||||||||||||||| | |||||||| ||||||||||||    
T  23866254 gcaaaa-cctacggtttcagacctcttctcactccaaaaacccaattttaatcccccaatcacccaaaatgttttccagcagatgttcacaggtcctata 23866352  T
Q  223 tacaa 227  Q
    |||||    
T  23866353 tacaa 23866357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 341 - 543
Target Start/End: Complemental strand, 8727931 - 8727735
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatca 440  Q
    |||||||||| |||||  | |||||||||||||||||||||||||| |||| || || ||||||||||||| ||||||| || | |||||||| || |||    
T  8727931 tatgatcacaacaacagtatagattaagttttcattctgaacattacattacaacagaattaacatgatcaatacccatacc-cctcagaatcatcgtca 8727833  T
Q  441 aaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcaccctta 540  Q
    ||||||||||||||||||||      ||   |||||||||| | ||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||    
T  8727832 aaccctaaccctcaatttat-----cttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagggataatctcaccctta 8727738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 16 - 198
Target Start/End: Complemental strand, 24321191 - 24321010
Alignment:
Q  16 tcactgctcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatct 115  Q
    |||||| ||||||||||||||||| ||||||  ||| |||||| | |  | |||||| ||||||||| ||||| |   | ||||||||||||  ||||||    
T  24321191 tcactgttcgcttaagcgaacgggtaaaatcacatt-ctgggtagttcacgtgaatgttcgcttaagcgacggatgctttgcttaagcgaccaatcatct 24321093  T
Q  116 gggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttc 198  Q
    ||||||||||||| | |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  24321092 gggcagggtaaaagc-tacgattttcagacttctcctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttc 24321010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 130 - 273
Target Start/End: Complemental strand, 29643795 - 29643652
Alignment:
Q  130 cctacgatttcagacttctcctcactccaaaaa-cccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaat 228  Q
    ||||||||||||||||||||||||||||||||| |||| ||| |||||| ||||||||||||| |||||| | || |||||||||||| | ||| ||||     
T  29643795 cctacgatttcagacttctcctcactccaaaaaacccacttttaatcccgtgatcacccaaaacgttttccagcaaatgtttacaggttcaatacacaac 29643696  T
Q  229 tagacatctaaaggaacacaaaacagtcatccaccaacaacaatt 273  Q
    ||| |||| ||||||||| ||||||| ||| || |||||||||||    
T  29643695 taggcatcaaaaggaacataaaacaggcat-catcaacaacaatt 29643652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 465 - 551
Target Start/End: Original strand, 17054566 - 17054651
Alignment:
Q  465 atttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttg 551  Q
    ||||| ||||||||| | | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  17054566 attttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttggttttg 17054651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 52 - 253
Target Start/End: Original strand, 21839971 - 21840172
Alignment:
Q  52 tctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaac-ctacgatttcagacttctcc 150  Q
    ||||||| ||||||||||||||||||| ||| ||||| | | ||||||||| ||||  |||||||||||| | |||||| ||  | ||||| ||   | |    
T  21839971 tctgggttgcttgcttgaatgctcgctcaagcgacggatcgttcgcttaagtgaccattcatctgggcagtgcaaaaactctcgggtttcaaaccctttc 21840070  T
Q  151 tcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaaa 250  Q
    ||| ||||||| |||||||| ||||||||||||||| |||| || ||| || |||||||||||||| | |||||||   || ||||||||||||||||||    
T  21840071 tcattccaaaa-cccaattttaatcccctgatcacctaaaacgtattccaaaagatgtttacaggttcaatatacagcaaggcatctaaaggaacacaaa 21840169  T
Q  251 aca 253  Q
    |||    
T  21840170 aca 21840172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 52 - 253
Target Start/End: Original strand, 21931267 - 21931468
Alignment:
Q  52 tctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaac-ctacgatttcagacttctcc 150  Q
    ||||||| ||||||||||||||||||| ||| ||||| | | |||||| || ||||  |||||||||||| | |||||| ||  | ||||| ||   | |    
T  21931267 tctgggttgcttgcttgaatgctcgctcaagcgacggatcgttcgcttcagagaccattcatctgggcagtgcaaaaactctcgggtttcaaaccctttc 21931366  T
Q  151 tcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaaa 250  Q
    ||| ||||||| |||||||| |||||||||||||||||||| || ||| || |||||||||||||| | |||||||   || ||||||||||||||||||    
T  21931367 tcattccaaaa-cccaattttaatcccctgatcacccaaaacgtattccaaaagatgtttacaggttcaatatacagcaaggcatctaaaggaacacaaa 21931465  T
Q  251 aca 253  Q
    |||    
T  21931466 aca 21931468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 361 - 448
Target Start/End: Complemental strand, 27941032 - 27940946
Alignment:
Q  361 agattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaa 448  Q
    ||||||| |||||||||||||||||| |||| || || ||||||||||||| |||||||||| | |||||||| ||||||||||||||    
T  27941032 agattaaattttcattctgaacattacattacaacagaattaacatgatcaatacccattcc-cctcagaatcatcatcaaaccctaa 27940946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 167 - 253
Target Start/End: Original strand, 19750235 - 19750321
Alignment:
Q  167 atttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaaaaca 253  Q
    ||||||||||||||||||||||||| |||||| |  | |||||||||||| || |||| ||| || |||||||||||||||||||||    
T  19750235 atttcaatcccctgatcacccaaaacgttttccagaaaatgtttacaggttctgtatataataaggcatctaaaggaacacaaaaca 19750321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 489 - 555
Target Start/End: Complemental strand, 23482109 - 23482043
Alignment:
Q  489 tcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgatga 555  Q
    ||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||| ||| |||||    
T  23482109 tcaattttcagaaattatatactatgattattgagagatagtctcacccttaccttaatttagatga 23482043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 489 - 545
Target Start/End: Original strand, 18614271 - 18614327
Alignment:
Q  489 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 545  Q
    ||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||    
T  18614271 tcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18614327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 489 - 545
Target Start/End: Original strand, 39364919 - 39364975
Alignment:
Q  489 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 545  Q
    ||||||||||| |||| || | ||| |||||||||||||||||||||||||||||||    
T  39364919 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 39364975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 491 - 545
Target Start/End: Complemental strand, 29643440 - 29643386
Alignment:
Q  491 aattttcaggaattatagattatgattattgagagatagtctcacccttacctta 545  Q
    ||||||||| ||||| | |||||||||||||| ||||| ||||||||||||||||    
T  29643440 aattttcagaaattacatattatgattattgaaagataatctcacccttacctta 29643386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 490 - 551
Target Start/End: Complemental strand, 14056619 - 14056558
Alignment:
Q  490 caattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttg 551  Q
    |||||||||| | ||| | | ||| |||||||||||||||||||||||||||||||| ||||    
T  14056619 caattttcagaatttacatactattattattgagagatagtctcacccttaccttagatttg 14056558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 490 - 551
Target Start/End: Original strand, 25111976 - 25112037
Alignment:
Q  490 caattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttg 551  Q
    |||||||||| | ||| | | ||| |||||||||||||||||||||||||||||||| ||||    
T  25111976 caattttcagaatttacatactattattattgagagatagtctcacccttaccttagatttg 25112037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 546
Target Start/End: Complemental strand, 24320725 - 24320670
Alignment:
Q  491 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 546  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  24320725 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 24320670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 221 - 277
Target Start/End: Complemental strand, 8728050 - 8727995
Alignment:
Q  221 tatacaattagacatctaaaggaacacaaaacagtcatccaccaacaacaattacag 277  Q
    ||||||||||| |||||||||||||| ||||||  ||| || |||||||||||||||    
T  8728050 tatacaattaggcatctaaaggaacataaaacatgcat-caacaacaacaattacag 8727995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 489 - 545
Target Start/End: Original strand, 21931696 - 21931752
Alignment:
Q  489 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 545  Q
    ||||||||||| | ||||| ||||| || |||||||| ||| |||||||||||||||    
T  21931696 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 21931752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 221 - 253
Target Start/End: Original strand, 44477362 - 44477394
Alignment:
Q  221 tatacaattagacatctaaaggaacacaaaaca 253  Q
    |||||||||||||||||||||||||| ||||||    
T  44477362 tatacaattagacatctaaaggaacataaaaca 44477394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 221 - 253
Target Start/End: Original strand, 44492520 - 44492552
Alignment:
Q  221 tatacaattagacatctaaaggaacacaaaaca 253  Q
    |||||||||||||||||||||||||| ||||||    
T  44492520 tatacaattagacatctaaaggaacataaaaca 44492552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 144; Significance: 2e-75; HSPs: 4)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 341 - 551
Target Start/End: Complemental strand, 12049 - 11845
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatca 440  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||| | |||||||||| ||||||    
T  12049 tatgatcacagcaacaacaaagattaagttttcattctgaagattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatca 11950  T
Q  441 aaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcaccctta 540  Q
    ||||||||| |||||||||      |||| ||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  11949 aaccctaactctcaattta------ttttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccctta 11856  T
Q  541 ccttagttttg 551  Q
    |||||||||||    
T  11855 ccttagttttg 11845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 10 - 277
Target Start/End: Complemental strand, 12376 - 12113
Alignment:
Q  10 gctcgttcactgctcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgc 109  Q
    ||||| |||||| ||||||||||||||||| ||||||| ||||  |||  ||||||||||||||||||||||| ||||  |   ||||||||||||||      
T  12376 gctcgctcactgttcgcttaagcgaacgggtaaaatcgcattt--gggcagcttgcttgaatgctcgcttaagcgacgtctgcttcgcttaagcgaccaa 12279  T
Q  110 tcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtt 209  Q
    |||||||| ||| | |||| |||| | |||||||| ||| ||||||||||||||||||||| ||||||||||||||||||| || |||| ||||||||||    
T  12278 tcatctggccagtgcaaaa-cctatggtttcagacctcttctcactccaaaaacccaatttaaatcccctgatcacccaaagtggtttccaacagatgtt 12180  T
Q  210 tacaggtcctatatacaattagacatctaaaggaacacaaaacagtcatccaccaacaacaattacag 277  Q
    |||||||||||||||||| ||| |||||||||||||||||||||| ||| || |||||||||||||||    
T  12179 tacaggtcctatatacaactaggcatctaaaggaacacaaaacagccat-caacaacaacaattacag 12113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 341 - 546
Target Start/End: Original strand, 111543 - 111741
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatca 440  Q
    |||||||||| |||||  | |||||||||||||||||| ||||||| |||| || || ||||||||||||| |||||||||| | |||||||| ||||||    
T  111543 tatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcc-cctcagaatcatcatca 111641  T
Q  441 aaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcaccctta 540  Q
    ||||||||||||||||||      ||||| ||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  111642 aaccctaaccctcaattt------attttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccctta 111735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 221 - 253
Target Start/End: Original strand, 111425 - 111457
Alignment:
Q  221 tatacaattagacatctaaaggaacacaaaaca 253  Q
    |||||||||||||||||||||||||| ||||||    
T  111425 tatacaattagacatctaaaggaacataaaaca 111457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 138; Significance: 7e-72; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 341 - 545
Target Start/End: Original strand, 23057795 - 23057993
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatca 440  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| | |||||||||| ||||||    
T  23057795 tatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatca 23057894  T
Q  441 aaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcaccctta 540  Q
    ||||||||||||||||||      || || ||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  23057895 aaccctaaccctcaattt------atcttccaaaactatgcaattaggtcaattttcaggaattatagattatgattatcgagagatagtctcaccctta 23057988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 341 - 551
Target Start/End: Complemental strand, 29614345 - 29614141
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatca 440  Q
    |||||||||||||||||||||||||||||||||||||| ||||||  || | ||||| |||||||||||||||||||||| | ||||| |||| ||||||    
T  29614345 tatgatcacagcaacaacaaagattaagttttcattctaaacattcaat-acaagagaattaacatgatcattacccatttcccttcataatcatcatca 29614247  T
Q  441 aaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcaccctta 540  Q
    |||||||||||||||||||||||     | ||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  29614246 aaccctaaccctcaatttatttt-----tccaaaattatgcaactaggtcaattttcagaaattatagattatgattattgagagatagtctcaccctta 29614152  T
Q  541 ccttagttttg 551  Q
    |||||||||||    
T  29614151 ccttagttttg 29614141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 23 - 227
Target Start/End: Original strand, 12167906 - 12168108
Alignment:
Q  23 tcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagg 122  Q
    ||||||||||||||||| ||||||| ||| |||||  ||||||||||||||||||||||| ||||| |   |||||||||||||| |||||||||||||     
T  12167906 tcgcttaagcgaacgggtaaaatcgcatt-ctgggcagcttgcttgaatgctcgcttaagcgacggatgcttcgcttaagcgaccactcatctgggcagt 12168004  T
Q  123 gtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctata 222  Q
    | |||| |||||| |||||||| ||| |||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  12168005 gcaaaa-cctacggtttcagacctcttctcactccaaaaaccccattttaatcccctgatcacccaaaatgttttccaacagatgtttacaggtcctata 12168103  T
Q  223 tacaa 227  Q
    |||||    
T  12168104 tacaa 12168108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 23 - 227
Target Start/End: Original strand, 19286815 - 19287017
Alignment:
Q  23 tcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagg 122  Q
    ||||||||||||||||| ||||||| ||| |||||  ||||||||||||||||||||||| ||||| |   |||||||||||||| |||||||||||||     
T  19286815 tcgcttaagcgaacgggtaaaatcgcatt-ctgggcagcttgcttgaatgctcgcttaagcgacggatgcttcgcttaagcgaccactcatctgggcagt 19286913  T
Q  123 gtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctata 222  Q
    | |||| |||||| |||||||| ||| |||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19286914 gcaaaa-cctacggtttcagacctcttctcactccaaaaaccccattttaatcccctgatcacccaaaatgttttccaacagatgtttacaggtcctata 19287012  T
Q  223 tacaa 227  Q
    |||||    
T  19287013 tacaa 19287017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 10 - 273
Target Start/End: Complemental strand, 24513370 - 24513110
Alignment:
Q  10 gctcgttcactgctcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgc 109  Q
    ||||| |||||| || ||||||||||| | |||||||| ||| |||||  ||||||||||||||||||||||| ||||||| | ||||||||||||||      
T  24513370 gctcgctcactgttcacttaagcgaactgacaaaatcgaatt-ctgggcagcttgcttgaatgctcgcttaagcgacgggtcgttcgcttaagcgaccat 24513272  T
Q  110 tcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtt 209  Q
    |||||||||||| | ||||| |||||  |||| || ||| ||||||||||||||| ||||| |||||||||||||||||||| |||||| ||||||||||    
T  24513271 tcatctgggcagtgcaaaaatctacgggttca-acctcttctcactccaaaaacctaattttaatcccctgatcacccaaaacgttttccaacagatgtt 24513173  T
Q  210 tacaggtcctatatacaattagacatctaaaggaacacaaaacagtcatccaccaacaacaatt 273  Q
    ||||||| |  || |||| |||||||||||||||||||||||||| ||| || |||||||||||    
T  24513172 tacaggttcattacacaactagacatctaaaggaacacaaaacaggcat-caacaacaacaatt 24513110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 60 - 273
Target Start/End: Original strand, 9187072 - 9187284
Alignment:
Q  60 gcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaa 159  Q
    ||||||||||||||||||||||| ||||||| | ||||||||||||||  |||||||||||| | |||||||||||  | || || ||| ||| ||||||    
T  9187072 gcttgcttgaatgctcgcttaagcgacgggtcgttcgcttaagcgaccattcatctgggcagtgcaaaaacctacgggtccaaacctcttctcgctccaa 9187171  T
Q  160 aaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaaaacagtcatc 259  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||| ||||| |||| ||| |||||||||||||||||||||| |||     
T  9187172 aaacccaattttaatcccctgatcacccaaaacgttttccaacagatgtttacaggttctatacacaactaggcatctaaaggaacacaaaacaggcat- 9187270  T
Q  260 caccaacaacaatt 273  Q
    || |||||||||||    
T  9187271 caacaacaacaatt 9187284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 23 - 227
Target Start/End: Complemental strand, 19786381 - 19786179
Alignment:
Q  23 tcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagg 122  Q
    ||||||||||||||||| ||||||| ||| |||||  ||||||||||||||||||||||| ||||| |   ||||||||||||||  ||||||||||||     
T  19786381 tcgcttaagcgaacgggtaaaatcgcatt-ctgggcagcttgcttgaatgctcgcttaagcgacggatgcttcgcttaagcgaccattcatctgggcagt 19786283  T
Q  123 gtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctata 222  Q
    | |||| |||||| |||||||| ||| |||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19786282 gcaaaa-cctacggtttcagacctcttctcactccaaaaaccccattttaatcccctgatcacccaaaatgttttccaacagatgtttacaggtcctata 19786184  T
Q  223 tacaa 227  Q
    |||||    
T  19786183 tacaa 19786179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 23 - 227
Target Start/End: Original strand, 19877999 - 19878201
Alignment:
Q  23 tcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagg 122  Q
    ||||||||||||||||| ||||||| ||| |||||  ||||||||||||||||||||||| ||||| |   |||||||||||||| ||| |||||||||     
T  19877999 tcgcttaagcgaacgggtaaaatcgcatt-ctgggcagcttgcttgaatgctcgcttaagcgacggatgcttcgcttaagcgaccactcgtctgggcagt 19878097  T
Q  123 gtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctata 222  Q
    | |||| |||||| |||||||| ||| |||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19878098 gcaaaa-cctacggtttcagacctcttctcactccaaaaaccccattttaatcccctgatcacccaaaatgttttccaacagatgtttacaggtcctata 19878196  T
Q  223 tacaa 227  Q
    |||||    
T  19878197 tacaa 19878201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 23 - 227
Target Start/End: Original strand, 19883775 - 19883977
Alignment:
Q  23 tcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagg 122  Q
    ||||||||||||||||| ||||||| ||| |||||  ||||||||||||||||||||||| ||||| |   |||||||||||||| ||| |||||||||     
T  19883775 tcgcttaagcgaacgggtaaaatcgcatt-ctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccactcgtctgggcagt 19883873  T
Q  123 gtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctata 222  Q
    | |||| |||||| |||||||| ||| |||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19883874 gcaaaa-cctacggtttcagacctcttctcactccaaaaaccccattttaatcccctgatcacccaaaatgttttccaacagatgtttacaggtcctata 19883972  T
Q  223 tacaa 227  Q
    |||||    
T  19883973 tacaa 19883977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 23 - 227
Target Start/End: Complemental strand, 25470216 - 25470013
Alignment:
Q  23 tcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagg 122  Q
    ||||||||||||||||| ||||||| ||| |||||  ||||||||||||| ||||||||| ||| |||   ||||||||||||||  ||||||||||||     
T  25470216 tcgcttaagcgaacgggtaaaatcgcatt-ctgggcagcttgcttgaatgttcgcttaagcgacaggtgcttcgcttaagcgaccattcatctgggcagt 25470118  T
Q  123 gtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctata 222  Q
    | ||||||||||| ||||||||| || |||||||||||||||| |||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  25470117 gcaaaaacctacggtttcagactccttctcactccaaaaaccccattttaatcccctgttcacccaaaatgttttccaacagatgtttacaggtcctata 25470018  T
Q  223 tacaa 227  Q
    |||||    
T  25470017 tacaa 25470013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 10 - 244
Target Start/End: Original strand, 18799968 - 18800200
Alignment:
Q  10 gctcgttcactgctcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgc 109  Q
    ||||| |||||| ||||||||||||||||||||||||  ||| || ||  ||||||||||||||||||||||| ||||||| | ||||||||||||||      
T  18799968 gctcgctcactgttcgcttaagcgaacgggcaaaatcacatt-cttggcagcttgcttgaatgctcgcttaagcgacgggtcgttcgcttaagcgaccat 18800066  T
Q  110 tcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtt 209  Q
    |||||||||||| | |||||||| ||  |||| || ||| ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||     
T  18800067 tcatctgggcagtgcaaaaacctgcgggttca-acctcttctcactccaaaaacccaattttaatcccctgatcacccaaaatgttttccagcagatgtg 18800165  T
Q  210 tacaggtcctatatacaattagacatctaaaggaa 244  Q
    ||||||| ||||| |||| ||| ||||||||||||    
T  18800166 tacaggttctatacacaactaggcatctaaaggaa 18800200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 11 - 277
Target Start/End: Complemental strand, 29614673 - 29614409
Alignment:
Q  11 ctcgttcactgctcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgct 110  Q
    |||| |||||| ||||||||||||||||| ||||||| ||| |||||  | |||| |||||||||||||||| ||||| |   ||||||||||||||  |    
T  29614673 ctcgctcactgttcgcttaagcgaacgggtaaaatcgcatt-ctgggcagtttgcatgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaat 29614575  T
Q  111 catctgggcagggtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgttt 210  Q
    |||||| |||| | |||| |||||| |||||||| ||| |||||||||||||||| |||| ||||||||||||||||||||||||||| | |||||||||    
T  29614574 catctgtgcagtgcaaaa-cctacggtttcagacctcttctcactccaaaaaccccattttaatcccctgatcacccaaaatgttttccagcagatgttt 29614476  T
Q  211 acaggtcctatatacaattagaca-tctaaaggaacacaaaacagtcatccaccaacaacaattacag 277  Q
    ||||||||||||||||| ||| || ||||||| |||||||| ||| ||| || |||||||| ||||||    
T  29614475 acaggtcctatatacaactaggcattctaaagaaacacaaatcagccat-caacaacaacacttacag 29614409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 341 - 555
Target Start/End: Original strand, 23839055 - 23839263
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatca 440  Q
    |||||||||| |||||  | |||||||||||||||||||||||||| |||| || || ||||||||||||| |||||||||| ||| |||||| ||||||    
T  23839055 tatgatcacaacaacagtatagattaagttttcattctgaacattacattacaacagaattaacatgatcaatacccattcccctt-agaatcatcatca 23839153  T
Q  441 aaccctaaccctcaatttattttaatttttcaaa-actatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcaccctt 539  Q
    ||||||||||||||||||      || || |||| ||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  23839154 aaccctaaccctcaattt------atcttccaaacactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccctt 23839247  T
Q  540 accttagttttgatga 555  Q
    |||||| ||| |||||    
T  23839248 accttaatttagatga 23839263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 92 - 223
Target Start/End: Complemental strand, 19300213 - 19300083
Alignment:
Q  92 gctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaa 191  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  19300213 gctcgcttaagcgaccactcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaaaaacccaattttaatcccctgatca-ccaaaa 19300115  T
Q  192 tgttttctaacagatgtttacaggtcctatat 223  Q
     |||||| | || |||||||||||||||||||    
T  19300114 cgttttccagcaaatgtttacaggtcctatat 19300083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 341 - 546
Target Start/End: Complemental strand, 10986379 - 10986180
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatca 440  Q
    |||||||||| |||||  | |||||||||||||||||||||||||| |||| || || ||||||||||||| |||||||||| | |||||||| ||||||    
T  10986379 tatgatcacaacaacagtatagattaagttttcattctgaacattacattacaacagaattaacatgatcaatacccattcc-cctcagaatcatcatca 10986281  T
Q  441 aaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcaccctta 540  Q
    ||||||||||||||||||||      ||   |||||||||| | |||||||||||| || |||||||||||||||||||||| |||||||||||||||||    
T  10986280 aaccctaaccctcaatttat-----cttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgaaagatagtctcaccctta 10986186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 341 - 545
Target Start/End: Original strand, 4477714 - 4477912
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatca 440  Q
    |||||||||| |||||| | |||||||||||||||||| ||||||| |||| || || |||| |||||||| |||||||||| || ||||||| ||||||    
T  4477714 tatgatcacaacaacaatatagattaagttttcattctaaacattacattacaacagaattagcatgatcaatacccattcccct-cagaatcatcatca 4477812  T
Q  441 aaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcaccctta 540  Q
    ||||||||||| |||||||| ||        |||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  4477813 aaccctaacccacaatttatcttcca-----aaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccctta 4477907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 343 - 551
Target Start/End: Original strand, 18800296 - 18800498
Alignment:
Q  343 tgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaa 442  Q
    |||||||| |||||| | |||||||| ||||||| ||||||| | |||| || || ||||||||||||||||| |||||| || ||||||| ||||||||    
T  18800296 tgatcacaacaacaatatagattaagatttcattttgaacatcacattacaacagaattaacatgatcattactcattcc-ctccagaatcatcatcaaa 18800394  T
Q  443 ccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttacc 542  Q
    |||||||||||||||       ||||| |||||||| || | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||     
T  18800395 ccctaaccctcaattct-----attttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaca 18800489  T
Q  543 ttagttttg 551  Q
    |||||||||    
T  18800490 ttagttttg 18800498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 23 - 249
Target Start/End: Complemental strand, 34640501 - 34640275
Alignment:
Q  23 tcgcttaagcgaacgggcaaaa-tcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcag 121  Q
    |||||||||||||||||||||| ||| ||| |||||  |||||||||| |||||||||||| ||||| |   ||||||||||||||  || ||||| |||    
T  34640501 tcgcttaagcgaacgggcaaaaatcgcatt-ctgggcagcttgcttgactgctcgcttaagcgacggatgcttcgcttaagcgaccattcgtctggacag 34640403  T
Q  122 ggtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctat 221  Q
     | |||| |||||| ||||||||  ||||||||||||||||| | |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  34640402 tgcaaaa-cctacggtttcagaccactcctcactccaaaaactccatttcaatcccctgattacccaaaatgttttccaacagatgtttacaggtcctat 34640304  T
Q  222 atacaattagacatc-taaaggaacacaa 249  Q
    |||||| ||| |||| ||||| |||||||    
T  34640303 atacaactaggcatcataaagaaacacaa 34640275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 23 - 249
Target Start/End: Complemental strand, 34647175 - 34646949
Alignment:
Q  23 tcgcttaagcgaacgggcaaaa-tcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcag 121  Q
    |||||||||||||||||||||| ||| ||| |||||  |||||||||| |||||||||||| ||||| |   ||||||||||||||  || ||||| |||    
T  34647175 tcgcttaagcgaacgggcaaaaatcgcatt-ctgggcagcttgcttgactgctcgcttaagcgacggatgcttcgcttaagcgaccattcgtctggacag 34647077  T
Q  122 ggtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctat 221  Q
     | |||| |||||| ||||||||  ||||||||||||||||| | |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  34647076 tgcaaaa-cctacggtttcagaccactcctcactccaaaaactccatttcaatcccctgattacccaaaatgttttccaacagatgtttacaggtcctat 34646978  T
Q  222 atacaattagacatc-taaaggaacacaa 249  Q
    |||||| ||| |||| ||||| |||||||    
T  34646977 atacaactaggcatcataaagaaacacaa 34646949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 72 - 246
Target Start/End: Complemental strand, 11289136 - 11288962
Alignment:
Q  72 gctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacga-tttcagacttctcctcactccaaaaacccaa-tt 169  Q
    ||||||||||| || ||||||||||||||||||||| |||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||| ||    
T  11289136 gctcgcttaagcgatgggtagctcgcttaagcgaccactcatctgggcagggt-aaaagctacgattttcagacttctcctcactccaaaaacccaattt 11289038  T
Q  170 tcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaaca 246  Q
    | |||||||||||||||||||| ||||||  | | ||||||||| |||||||| |||| ||| |||| |||||||||    
T  11289037 ttaatcccctgatcacccaaaacgttttc-cagaaatgtttacaagtcctatacacaactaggcatcaaaaggaaca 11288962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 405 - 551
Target Start/End: Complemental strand, 930229 - 930090
Alignment:
Q  405 atgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaatt 504  Q
    |||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||      |||||||||| | | ||||||||||||||| || |    
T  930229 atgatcattacccattcc-cttcagaaacatcatcaaaccctaaccctcaatttatttt------tcaaaactatacaattaggtcaattttcagaaact 930137  T
Q  505 atagattatgattattgagagatagtctcacccttaccttagttttg 551  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  930136 atagattatgattattgagagatagtctcacccttaccttagttttg 930090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 72 - 253
Target Start/End: Original strand, 31252012 - 31252193
Alignment:
Q  72 gctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttc 171  Q
    ||||||||||| ||||||  | |||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||  ||||||||||||||| |||     
T  31252012 gctcgcttaagcgacgggatgttcgcttaagcgaccactcatctggacagggtaaaaacttacgatttcagacttctctccactccaaaaacccagtttt 31252111  T
Q  172 aatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaaaaca 253  Q
    ||||||||||||||||||||  ||||| | |   ||||||||||| ||||| |||| ||| |||| |||||||||| |||||    
T  31252112 aatcccctgatcacccaaaacattttccagcgattgtttacaggttctatacacaactagtcatcgaaaggaacacgaaaca 31252193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 10 - 198
Target Start/End: Complemental strand, 20008474 - 20008287
Alignment:
Q  10 gctcgttcactgctcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgc 109  Q
    ||||| |||||| ||||||||||||||||| ||||||  ||| |||||| | |  | |||||| ||||||||| ||||| |   ||||||||||||||      
T  20008474 gctcgctcactgttcgcttaagcgaacgggtaaaatcacatt-ctgggtagttcacgtgaatgttcgcttaagcgacggatgcttcgcttaagcgaccaa 20008376  T
Q  110 tcatctgggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttc 198  Q
    ||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  20008375 tcatctgggcagggtaaaagc-tacgattttcagacttctcctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttc 20008287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 51 - 253
Target Start/End: Complemental strand, 19471822 - 19471621
Alignment:
Q  51 ttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacga-tttcagacttctc 149  Q
    |||||||| |||| |||||||||||||||||| ||||||| | ||||||||||||||  |||||||||||| | |||||| ||||  |||||  | | ||    
T  19471822 ttctgggttgcttacttgaatgctcgcttaagcgacgggtcgttcgcttaagcgaccattcatctgggcagtgcaaaaacttacgggtttcatccctttc 19471723  T
Q  150 ctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaa 249  Q
     ||| ||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||| | | |||||||| ||| |||||| ||||||| ||    
T  19471722 -tcattccaaaa-cccaattttaatcccctgatcacccaaaatgttttccaacagatgtttacagattcaatatacaactaggcatctataggaacataa 19471625  T
Q  250 aaca 253  Q
    ||||    
T  19471624 aaca 19471621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 72 - 198
Target Start/End: Complemental strand, 9099536 - 9099410
Alignment:
Q  72 gctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaacccaattt 170  Q
    ||||||||||| || |||  | |||||||||||||| |||||||||||| ||||| | | |||||||| |||||||||||||||||||||||||||||||    
T  9099536 gctcgcttaagcgatgggatgttcgcttaagcgaccactcatctgggcatggtaacagc-tacgattttcagacttctcctcactccaaaaacccaattt 9099438  T
Q  171 caatcccctgatcacccaaaatgttttc 198  Q
     |||||||||||||||||||||||||||    
T  9099437 taatcccctgatcacccaaaatgttttc 9099410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 51 - 273
Target Start/End: Original strand, 25396741 - 25396962
Alignment:
Q  51 ttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacga-tttcagacttctc 149  Q
    |||| ||| |||| |||||||||||||||||| || |||| | ||||||||||||||  |||||||||||| |||||||| ||||  ||||| ||   |     
T  25396741 ttctaggttgcttacttgaatgctcgcttaagcgatgggtcgttcgcttaagcgaccattcatctgggcagtgtaaaaacttacgggtttcaaacccttt 25396840  T
Q  150 ctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaa 249  Q
    |||| ||||||| |||||||| |||  ||||||||||||||| |||||| ||||||||||||||||| |  || |||| ||| |||||||||||||| ||    
T  25396841 ctcattccaaaa-cccaattttaatttcctgatcacccaaaacgttttccaacagatgtttacaggttcagtacacaactaggcatctaaaggaacataa 25396939  T
Q  250 aacagtcatccaccaacaacaatt 273  Q
    ||||| ||| || |||||||||||    
T  25396940 aacaggcat-caacaacaacaatt 25396962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 72 - 198
Target Start/End: Original strand, 29097455 - 29097581
Alignment:
Q  72 gctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaacccaattt 170  Q
    ||||||||||| || |||  | |||||||||||||| |||||||||||||||||| | | |||||||| |||||||||||||||||||||||| ||||||    
T  29097455 gctcgcttaagcgatgggatgttcgcttaagcgaccactcatctgggcagggtaacagc-tacgattttcagacttctcctcactccaaaaactcaattt 29097553  T
Q  171 caatcccctgatcacccaaaatgttttc 198  Q
     |||||||||||||||||||| ||||||    
T  29097554 taatcccctgatcacccaaaaggttttc 29097581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 348 - 551
Target Start/End: Complemental strand, 19786057 - 19785864
Alignment:
Q  348 acagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaacccta 447  Q
    ||||||||||||  ||||||| |||| |||| ||||||| |||  ||||  | |||||| ||| |||| ||||||   |||||||| |||||||||||||    
T  19786057 acagcaacaacatggattaagatttcgttcttaacattaaattccaagaa-actaacatcatctttactcattcca--tcagaatcatcatcaaacccta 19785961  T
Q  448 accctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagt 547  Q
    ||  ||| ||||||||       ||||||||| | ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19785960 actttcattttattttc------caaaactattcaactaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagt 19785868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 16 - 198
Target Start/End: Complemental strand, 21364998 - 21364817
Alignment:
Q  16 tcactgctcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatct 115  Q
    |||||| ||||||| ||||||||| ||||||  ||| |||||| | |  | |||||| ||||||||| ||||| ||  ||||||||||||||  || |||    
T  21364998 tcactgttcgcttaggcgaacgggtaaaatcacatt-ctgggtagttcacatgaatgttcgcttaagcgacggatacttcgcttaagcgaccaatcgtct 21364900  T
Q  116 gggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttc 198  Q
    ||||||||||||| | |||||||| ||||||||||||||||||||||||||||||| |||||||   |||||||||| ||||||    
T  21364899 gggcagggtaaaagc-tacgattttcagacttctcctcactccaaaaacccaattttaatccccaattcacccaaaacgttttc 21364817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 16 - 198
Target Start/End: Complemental strand, 23968980 - 23968799
Alignment:
Q  16 tcactgctcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatct 115  Q
    |||||| ||||||| ||||||||| ||||||  ||| |||||| | |  | |||||| ||||||||| ||||| ||  ||||||||||||||  || |||    
T  23968980 tcactgttcgcttaggcgaacgggtaaaatcacatt-ctgggtagttcacatgaatgttcgcttaagcgacggatacttcgcttaagcgaccaatcgtct 23968882  T
Q  116 gggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttc 198  Q
    ||||||||||||| | |||||||| ||||||||||||||||||||||||||||||| |||||||   |||||||||| ||||||    
T  23968881 gggcagggtaaaagc-tacgattttcagacttctcctcactccaaaaacccaattttaatccccaattcacccaaaacgttttc 23968799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 465 - 551
Target Start/End: Original strand, 12168338 - 12168423
Alignment:
Q  465 atttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttg 551  Q
    ||||| ||||||||| | | ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12168338 attttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttg 12168423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 73 - 251
Target Start/End: Original strand, 15458081 - 15458258
Alignment:
Q  73 ctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttca 172  Q
    |||||||||| || |||  | ||||||||||||||  ||||| |  |||||||||||| ||||||||||||||||||  ||||||||||||||||||| |    
T  15458081 ctcgcttaagcgatgggatgttcgcttaagcgaccattcatcagtacagggtaaaaacttacgatttcagacttctctccactccaaaaacccaatttta 15458180  T
Q  173 atcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaaaa 251  Q
    |||||| |||| ||||||| |||||| | |   |||||||||| | |||| |||| ||| |||| ||| ||||||||||    
T  15458181 atcccccgatcgcccaaaacgttttccagcgattgtttacaggacatatacacaactaggcatc-aaaagaacacaaaa 15458258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 73 - 251
Target Start/End: Original strand, 15464676 - 15464853
Alignment:
Q  73 ctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttca 172  Q
    |||||||||| || |||  | ||||||||||||||  ||||| |  |||||||||||| ||||||||||||||||||  ||||||||||||||||||| |    
T  15464676 ctcgcttaagcgatgggatgttcgcttaagcgaccattcatcagtacagggtaaaaacttacgatttcagacttctctccactccaaaaacccaatttta 15464775  T
Q  173 atcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaaaa 251  Q
    |||||| |||| ||||||| |||||| | |   |||||||||| | |||| |||| ||| |||| ||| ||||||||||    
T  15464776 atcccccgatcgcccaaaacgttttccagcgattgtttacaggacatatacacaactaggcatc-aaaagaacacaaaa 15464853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 465 - 551
Target Start/End: Original strand, 19287247 - 19287332
Alignment:
Q  465 atttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttg 551  Q
    ||||| ||||||||| | | ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19287247 attttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttg 19287332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 465 - 551
Target Start/End: Original strand, 19878431 - 19878516
Alignment:
Q  465 atttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttg 551  Q
    ||||| ||||||||| | | ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19878431 attttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttg 19878516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 465 - 546
Target Start/End: Complemental strand, 34640067 - 34639986
Alignment:
Q  465 atttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 546  Q
    ||||| ||||||||| | | ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  34640067 attttccaaaactattcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttag 34639986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 465 - 551
Target Start/End: Original strand, 19884207 - 19884292
Alignment:
Q  465 atttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttg 551  Q
    ||||| ||||||||| | | ||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  19884207 attttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcaccctaaccttagttttg 19884292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 341 - 458
Target Start/End: Complemental strand, 21565410 - 21565294
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatca 440  Q
    ||||||||||||||||  | |||||||| |||||||| |||| | | |||| || |  |||||||||||||||||||||||| ||| |||||| ||||||    
T  21565410 tatgatcacagcaacagtatagattaagatttcattccgaacgtcacattacaacataattaacatgatcattacccattcccctt-agaatcatcatca 21565312  T
Q  441 aaccctaaccctcaattt 458  Q
    ||||||||||||||||||    
T  21565311 aaccctaaccctcaattt 21565294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 159 - 244
Target Start/End: Complemental strand, 21565589 - 21565504
Alignment:
Q  159 aaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaa 244  Q
    |||||||||||| |||||||||||||||||||| |||||| | ||||||||||||||| ||||| |||| ||| ||||||||||||    
T  21565589 aaaacccaattttaatcccctgatcacccaaaacgttttccagcagatgtttacaggttctatacacaactagtcatctaaaggaa 21565504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 485 - 546
Target Start/End: Complemental strand, 34646721 - 34646660
Alignment:
Q  485 taggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 546  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  34646721 taggtcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttag 34646660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 500 - 546
Target Start/End: Complemental strand, 25469750 - 25469704
Alignment:
Q  500 gaattatagattatgattattgagagatagtctcacccttaccttag 546  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  25469750 gaattatagattatgattattgagagatagtctcacccttaccttag 25469704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 490 - 551
Target Start/End: Complemental strand, 24512899 - 24512838
Alignment:
Q  490 caattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttg 551  Q
    |||||||||| ||||||| | |||||||||||||||||||||||||||| ||||||| ||||    
T  24512899 caattttcagaaattatatactatgattattgagagatagtctcaccctcaccttagatttg 24512838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 493 - 545
Target Start/End: Original strand, 9187498 - 9187550
Alignment:
Q  493 ttttcaggaattatagattatgattattgagagatagtctcacccttacctta 545  Q
    ||||||| ||||||  |||| ||||||||||||||||||||||||||||||||    
T  9187498 ttttcagaaattatgtattaagattattgagagatagtctcacccttacctta 9187550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 489 - 545
Target Start/End: Original strand, 25348486 - 25348542
Alignment:
Q  489 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 545  Q
    ||||||||||| |||| || | ||| |||||||||||||||||||||||||||||||    
T  25348486 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 25348542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 489 - 543
Target Start/End: Original strand, 25598643 - 25598697
Alignment:
Q  489 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacct 543  Q
    ||||||||||| || |||| |||||||| |||||||| |||||||||||||||||    
T  25598643 tcaattttcagaaaatatatattatgatcattgagagttagtctcacccttacct 25598697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 102
Target Start/End: Complemental strand, 21565717 - 21565627
Alignment:
Q  10 gctcgttcactgctcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaag 102  Q
    ||||| |||| | ||||||||||||||||||||| ||| ||| |||||  ||||||| ||||||||||||||| ||||| | | |||||||||    
T  21565717 gctcgctcacggttcgcttaagcgaacgggcaaa-tcgcatt-ctgggcagcttgctagaatgctcgcttaagcgacggctggttcgcttaag 21565627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 511 - 555
Target Start/End: Original strand, 24441673 - 24441717
Alignment:
Q  511 tatgattattgagagatagtctcacccttaccttagttttgatga 555  Q
    ||||||||||||||| ||||||||||||||||||| ||| |||||    
T  24441673 tatgattattgagagttagtctcacccttaccttaatttagatga 24441717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 489 - 545
Target Start/End: Original strand, 25397172 - 25397228
Alignment:
Q  489 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 545  Q
    ||||||||||| ||||||| |||||||| || ||||| ||| |||||||||||||||    
T  25397172 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta 25397228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 511 - 555
Target Start/End: Complemental strand, 29415591 - 29415547
Alignment:
Q  511 tatgattattgagagatagtctcacccttaccttagttttgatga 555  Q
    ||||||||||||||| ||| ||||| |||||||||||||||||||    
T  29415591 tatgattattgagagttagcctcactcttaccttagttttgatga 29415547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 511 - 545
Target Start/End: Original strand, 18659450 - 18659484
Alignment:
Q  511 tatgattattgagagatagtctcacccttacctta 545  Q
    ||||||||||||||| |||||||||||||||||||    
T  18659450 tatgattattgagagttagtctcacccttacctta 18659484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 205 - 253
Target Start/End: Complemental strand, 2287103 - 2287055
Alignment:
Q  205 atgtttacaggtcctatatacaattagacatctaaaggaacacaaaaca 253  Q
    ||||||| |||| | |||||||||||| |||||||||||||| ||||||    
T  2287103 atgtttataggttcaatatacaattaggcatctaaaggaacataaaaca 2287055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 221 - 253
Target Start/End: Original strand, 4477596 - 4477628
Alignment:
Q  221 tatacaattagacatctaaaggaacacaaaaca 253  Q
    |||||||||||||||||||||||||| ||||||    
T  4477596 tatacaattagacatctaaaggaacataaaaca 4477628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 489 - 545
Target Start/End: Complemental strand, 19471391 - 19471335
Alignment:
Q  489 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 545  Q
    ||||||| ||| ||||||| |||||||| || ||||| ||| |||||||||||||||    
T  19471391 tcaatttccagaaattatatattatgatcatcgagaggtagcctcacccttacctta 19471335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 518 - 546
Target Start/End: Complemental strand, 28288537 - 28288509
Alignment:
Q  518 attgagagatagtctcacccttaccttag 546  Q
    |||||||||||||||||||||||||||||    
T  28288537 attgagagatagtctcacccttaccttag 28288509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 137; Significance: 3e-71; HSPs: 4)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 341 - 551
Target Start/End: Original strand, 111738 - 111943
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatca 440  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| | |||||||||| ||||||    
T  111738 tatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatca 111837  T
Q  441 aaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaa-ttttcaggaattatagattatgattattgagagatagtctcaccctt 539  Q
    ||||||||||||||||||      || || ||||||||||| | |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  111838 aaccctaaccctcaattt------atcttccaaaactatgcaattaggtcaatttttcagaaattatagattatgattattgagagatagtctcaccctt 111931  T
Q  540 accttagttttg 551  Q
    ||||||||||||    
T  111932 accttagttttg 111943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 23 - 277
Target Start/End: Original strand, 111444 - 111694
Alignment:
Q  23 tcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagg 122  Q
    ||||||||||||||||| ||||||| ||  |||||  | || |||||||||||||||||| ||||| |   ||||||||||||||  ||||||||||||     
T  111444 tcgcttaagcgaacgggtaaaatcgcata-ctgggcagtttacttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggcagt 111542  T
Q  123 gtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctata 222  Q
    | |||| |||||| |||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||| ||||||||||||||    
T  111543 gcaaaa-cctacggtttcagacctcttctcactccaaaaacccaattttaatcccctgatcacccaaaatgtttcccaacagatg-ttacaggtcctata 111640  T
Q  223 tacaattagacatctaaaggaacacaaaacagtcatccaccaacaacaattacag 277  Q
    ||||| ||| |||||||||||||||||||||| ||| || |||||||||||||||    
T  111641 tacaactaggcatctaaaggaacacaaaacagccat-caacaacaacaattacag 111694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 67 - 227
Target Start/End: Complemental strand, 91672 - 91513
Alignment:
Q  67 tgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaaccc 165  Q
    |||||| ||||||||| ||||| |   ||||||||||||||  || |||||||||||||||| | |||||||| ||||||||||||||||||||||||||    
T  91672 tgaatgttcgcttaagcgacggatgcttcgcttaagcgaccaatcgtctgggcagggtaaaagc-tacgattttcagacttctcctcactccaaaaaccc 91574  T
Q  166 aatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaa 227  Q
    ||||| |||||||   |||||||||| ||||||    | ||||||||| |||||||||||||    
T  91573 aattttaatccccaattcacccaaaacgttttc-ctgaaatgtttacaagtcctatatacaa 91513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 67 - 227
Target Start/End: Complemental strand, 97398 - 97239
Alignment:
Q  67 tgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaaccc 165  Q
    |||||| ||||||||| ||||| |   ||||||||||||||  || |||||||||||||||| | |||||||| ||||||| ||||||||||||||||||    
T  97398 tgaatgttcgcttaagcgacggatgcttcgcttaagcgaccaatcgtctgggcagggtaaaagc-tacgattttcagacttttcctcactccaaaaaccc 97300  T
Q  166 aatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaa 227  Q
    ||||| |||||||   |||||||||| ||||||    | ||||||||| |||||||||||||    
T  97299 aattttaatccccaattcacccaaaacgttttc-ctgaaatgtttacaagtcctatatacaa 97239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 136; Significance: 1e-70; HSPs: 2)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 341 - 551
Target Start/End: Original strand, 1036 - 1238
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatca 440  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| | ||||| |||| ||||||    
T  1036 tatgatcacagcaacaacaa-gattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcataatcctcatca 1134  T
Q  441 aaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcaccctta 540  Q
    ||||||||||||||||||      ||||| ||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  1135 aaccctaaccctcaattt------attttccaaaactatgcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtctcaccctta 1227  T
Q  541 ccttagttttg 551  Q
    |||||||||||    
T  1228 ccttagttttg 1238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773; HSP #2
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 23 - 250
Target Start/End: Original strand, 721 - 947
Alignment:
Q  23 tcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagg 122  Q
    ||||||||||||||||| ||||||| ||| |||||  | || |||||||||||||||||| ||||| |   ||||||||||||||  ||||||||||||     
T  721 tcgcttaagcgaacgggtaaaatcgcatt-ctgggcagtttacttgaatgctcgcttaagagacggctgcttcgcttaagcgaccaatcatctgggcagt 819  T
Q  123 gtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctata 222  Q
    | ||||||||||||||||| || ||| ||||||||||||||||||||| |||||||  || ||||||||||||||| | |||||||||||||||||||||    
T  820 gcaaaaacctacgatttcaaacctcttctcactccaaaaacccaattttaatcccccaattacccaaaatgttttccagcagatgtttacaggtcctata 919  T
Q  223 tacaattagacatctaaaggaacacaaa 250  Q
    ||||| ||  ||||||| ||||||||||    
T  920 tacaactaagcatctaagggaacacaaa 947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 136; Significance: 1e-70; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 341 - 551
Target Start/End: Original strand, 50037 - 50239
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatca 440  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| | ||||| |||| ||||||    
T  50037 tatgatcacagcaacaacaa-gattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcataatcctcatca 50135  T
Q  441 aaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcaccctta 540  Q
    ||||||||||||||||||      ||||| ||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  50136 aaccctaaccctcaattt------attttccaaaactatgcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtctcaccctta 50228  T
Q  541 ccttagttttg 551  Q
    |||||||||||    
T  50229 ccttagttttg 50239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 23 - 250
Target Start/End: Original strand, 49722 - 49948
Alignment:
Q  23 tcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagg 122  Q
    ||||||||||||||||| ||||||| ||| |||||  | || |||||||||||||||||| ||||| |   ||||||||||||||  ||||||||||||     
T  49722 tcgcttaagcgaacgggtaaaatcgcatt-ctgggcagtttacttgaatgctcgcttaagagacggctgcttcgcttaagcgaccaatcatctgggcagt 49820  T
Q  123 gtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctata 222  Q
    | ||||||||||||||||| || ||| ||||||||||||||||||||| |||||||  || ||||| ||||||||| | |||||||||||||||||||||    
T  49821 gcaaaaacctacgatttcaaacctcttctcactccaaaaacccaattttaatcccccaattacccacaatgttttccagcagatgtttacaggtcctata 49920  T
Q  223 tacaattagacatctaaaggaacacaaa 250  Q
    ||||| ||  ||||||| ||||||||||    
T  49921 tacaactaagcatctaagggaacacaaa 49948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 135; Significance: 4e-70; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 341 - 550
Target Start/End: Original strand, 18873217 - 18873420
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatca 440  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| | |||||||||| ||||||    
T  18873217 tatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatca 18873316  T
Q  441 aaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcaccctta 540  Q
    ||||||||||||||||||      || || ||||||||||| | ||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||    
T  18873317 aaccctaaccctcaattt------atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagaaagtctcaccctta 18873410  T
Q  541 ccttagtttt 550  Q
    ||||||||||    
T  18873411 ccttagtttt 18873420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 341 - 545
Target Start/End: Original strand, 15168032 - 15168230
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatca 440  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| | |||||||||| ||||||    
T  15168032 tatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatca 15168131  T
Q  441 aaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcaccctta 540  Q
    ||||||||||||||||||      || || ||||||||||| | ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  15168132 aaccctaaccctcaattt------atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcaccctta 15168225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 16 - 273
Target Start/End: Complemental strand, 21231480 - 21231226
Alignment:
Q  16 tcactgctcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatct 115  Q
    |||||| |||||||||||||| | |||||||| |||| ||||  ||||||||||||||||||||||| ||||||| | ||||||||||||||  ||||||    
T  21231480 tcactgttcgcttaagcgaactgacaaaatcgcattt-tgggcagcttgcttgaatgctcgcttaagtgacgggtcgttcgcttaagcgaccattcatct 21231382  T
Q  116 gggcagggtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacagg 215  Q
    |||||| | |||||||||||  |||| || ||| |||||||||||||| |||||| |||||||||||||||| |||||||||| | ||||||||||||||    
T  21231381 gggcagtgcaaaaacctacgggttca-acctcttctcactccaaaaactcaattttaatcccctgatcaccctaaatgttttccagcagatgtttacagg 21231283  T
Q  216 tcctatatacaattagacatctaaaggaacacaaaacagtcatccaccaacaacaatt 273  Q
    ||||||| |||| |||||||||||||||||||||| ||| ||| || |||||||||||    
T  21231282 tcctatacacaactagacatctaaaggaacacaaatcaggcat-caacaacaacaatt 21231226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 23 - 227
Target Start/End: Original strand, 13006975 - 13007177
Alignment:
Q  23 tcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagg 122  Q
    ||||||||||||||||| ||||||| ||| |||||  ||||||||||||||||||||||| ||||| |   |||||||||||||| |||||||||||||     
T  13006975 tcgcttaagcgaacgggtaaaatcgcatt-ctgggcagcttgcttgaatgctcgcttaagcgacggatgcttcgcttaagcgaccactcatctgggcagt 13007073  T
Q  123 gtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctata 222  Q
    | |||| |||||| |||||||| ||| |||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  13007074 gcaaaa-cctacggtttcagacctcttctcactccaaaaaccccattttaatcccctgatcacccaaaatgttttccaacagatgtttacaggtcctata 13007172  T
Q  223 tacaa 227  Q
    |||||    
T  13007173 tacaa 13007177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 344 - 551
Target Start/End: Complemental strand, 12710038 - 12709838
Alignment:
Q  344 gatcacagcaacaacaaagattaagttttcattctgaacattatattataag-aggattaacatgatcattacccattcctcttcagaatcgtcatcaaa 442  Q
    ||||||||||||||||| ||||||||||  |||||||||||||||||| ||  || |||||||||||||||||||||| ||||||| |||| ||||||||    
T  12710038 gatcacagcaacaacaa-gattaagtttatattctgaacattatattacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaa 12709940  T
Q  443 ccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttacc 542  Q
    |||||||||||||||||      |||| ||||||||||| | |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  12709939 ccctaaccctcaattta------ttttccaaaactatgcaattaggtcaa-tttcaggaattataaattatgattattgagagatagtctcacccttacc 12709847  T
Q  543 ttagttttg 551  Q
    |||||||||    
T  12709846 ttagttttg 12709838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 344 - 551
Target Start/End: Complemental strand, 13123109 - 13122909
Alignment:
Q  344 gatcacagcaacaacaaagattaagttttcattctgaacattatattataag-aggattaacatgatcattacccattcctcttcagaatcgtcatcaaa 442  Q
    ||||||||||||||||| ||||||||||  |||||||||||||||||| ||  || |||||||||||||||||||||| ||||||| |||| ||||||||    
T  13123109 gatcacagcaacaacaa-gattaagtttatattctgaacattatattacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaa 13123011  T
Q  443 ccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttacc 542  Q
    |||||||||||||||||      |||| ||||||||||| | |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  13123010 ccctaaccctcaattta------ttttccaaaactatgcaattaggtcaa-tttcaggaattataaattatgattattgagagatagtctcacccttacc 13122918  T
Q  543 ttagttttg 551  Q
    |||||||||    
T  13122917 ttagttttg 13122909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 341 - 541
Target Start/End: Complemental strand, 10895989 - 10895795
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatca 440  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||| | |||||||| ||||||    
T  10895989 tatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcaatacccattcc-cctcagaatcatcatca 10895891  T
Q  441 aaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcaccctta 540  Q
    ||||||||||| ||||||||      ||   |||||||||| | ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  10895890 aaccctaacccacaatttat-----cttccaaaaactatgcaattaggtcaattttcaaaaattatagattatgattattgagagatagtctcaccctta 10895796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 341 - 551
Target Start/End: Original strand, 13743566 - 13743769
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatca 440  Q
    |||||||||||||| |||| ||||||||| |||| ||||||||  ||| || ||||  |||||||||||||||||||||| ||||||| |||| ||||||    
T  13743566 tatgatcacagcaataacatagattaagtcttcaatctgaacagcataatacaagaaaattaacatgatcattacccatttctcttcataatcatcatca 13743665  T
Q  441 aaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcaccctta 540  Q
    ||||||||||||||||||      ||||| ||||||||||| | |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  13743666 aaccctaaccctcaattt------attttccaaaactatgcaattaggtcaa-tttcaggaattataaattatgattattgagagatagtctcaccctta 13743758  T
Q  541 ccttagttttg 551  Q
    |||||||||||    
T  13743759 ccttagttttg 13743769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 341 - 555
Target Start/End: Original strand, 14422841 - 14423049
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatca 440  Q
    |||||||||| |||||| | |||||||||||||||||| ||||||| |||| || || ||||||||||||| |||||||||| | |||||||| ||||||    
T  14422841 tatgatcacaacaacaatatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcc-cctcagaatcatcatca 14422939  T
Q  441 aaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcaccctta 540  Q
    ||||||||||||||||||||      ||   |||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  14422940 aaccctaaccctcaatttat-----cttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccctta 14423034  T
Q  541 ccttagttttgatga 555  Q
    ||||||||| |||||    
T  14423035 ccttagtttagatga 14423049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 23 - 227
Target Start/End: Complemental strand, 12591156 - 12590954
Alignment:
Q  23 tcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagg 122  Q
    ||||||||||||||||| ||||||| ||| |||||  ||||||||||||||||||||||| ||||| |   ||||||||||||||  ||||||||||||     
T  12591156 tcgcttaagcgaacgggtaaaatcgcatt-ctgggaagcttgcttgaatgctcgcttaagcgacggatgcttcgcttaagcgaccattcatctgggcagt 12591058  T
Q  123 gtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctata 222  Q
    | |||| |||||| ||||||||| || |||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  12591057 gcaaaa-cctacggtttcagactacttctcactccaaaaaccccattttaatcccctgatcacccaaaatgttttccaacagatgtttacagatcctata 12590959  T
Q  223 tacaa 227  Q
    |||||    
T  12590958 tacaa 12590954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 72 - 251
Target Start/End: Complemental strand, 14320096 - 14319917
Alignment:
Q  72 gctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttc 171  Q
    ||||||||||| || |||  | |||||||||||||| ||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||     
T  14320096 gctcgcttaagcgatgggatgttcgcttaagcgaccactcatctgggcaacgtaaaaacttacgatttcagacttctcctcactccaaaaacccaatttt 14319997  T
Q  172 aatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaaaa 251  Q
    |||||||||||||||||||| |||||| | ||  ||||||||||| ||||| ||||||||||||| ||||||||||||||    
T  14319996 aatcccctgatcacccaaaacgttttccagcaattgtttacaggttctatacacaattagacatcgaaaggaacacaaaa 14319917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 341 - 545
Target Start/End: Original strand, 16009434 - 16009631
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatca 440  Q
    |||||||||| |||||  | |||||||||||||||||| ||||||| |||| || || ||||||||||||| |||||||||| || ||||||| ||||||    
T  16009434 tatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatcatcatca 16009532  T
Q  441 aaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcaccctta 540  Q
    |||| |||||| |||||||| ||       |||||| |||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16009533 aaccttaacccacaatttatcttc------caaaaccatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccctta 16009626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 23 - 227
Target Start/End: Complemental strand, 11383384 - 11383182
Alignment:
Q  23 tcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagg 122  Q
    ||||||||||||| ||||||||||  ||| || ||  ||||||||||||||||||||||| ||||||| | ||||||||||||||  ||||||||||||     
T  11383384 tcgcttaagcgaaagggcaaaatcacatt-ctaggcagcttgcttgaatgctcgcttaagcgacgggtcgttcgcttaagcgaccattcatctgggcagt 11383286  T
Q  123 gtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctata 222  Q
    | |||| ||||||  ||||||| ||| |||||||||| |||||||||| ||||||||||||||| |||| |||||| | |||||||||||||||||||||    
T  11383285 gcaaaa-cctacgggttcagacctcttctcactccaagaacccaattttaatcccctgatcacctaaaacgttttccagcagatgtttacaggtcctata 11383187  T
Q  223 tacaa 227  Q
     ||||    
T  11383186 cacaa 11383182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 16 - 227
Target Start/End: Original strand, 13743244 - 13743453
Alignment:
Q  16 tcactgctcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatct 115  Q
    |||||| ||||||||||||||||| | ||||| ||| |||||  | || |||||||||||||||||| ||||| |   ||||||||||||||  ||||||    
T  13743244 tcactgttcgcttaagcgaacgggtagaatcgcatt-ctgggcagtttccttgaatgctcgcttaagcgacggatgcttcgcttaagcgaccaatcatct 13743342  T
Q  116 gggcagggtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacagg 215  Q
    |||||| | |||| |||||| |||||||| ||| ||||||||||||||||||||| |||||||  |||||||||||||||||| | |||||||| |||||    
T  13743343 gggcagtgcaaaa-cctacggtttcagacctcttctcactccaaaaacccaattttaatcccccaatcacccaaaatgttttccagcagatgttcacagg 13743441  T
Q  216 tcctatatacaa 227  Q
    ||||||||||||    
T  13743442 tcctatatacaa 13743453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 51 - 253
Target Start/End: Original strand, 46625528 - 46625730
Alignment:
Q  51 ttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacga-tttcagacttctc 149  Q
    |||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||  |||||||||||| | |||||| ||||  ||||| ||   |     
T  46625528 ttctgggttgcttgcttgaatgctcgcttaagcgacgggtagttcgcttaagcgaccattcatctgggcagtgcaaaaacttacgggtttcaaacccttt 46625627  T
Q  150 ctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaa 249  Q
    |||| ||||||| |||||||| ||| |||||||||||||||| |||||| ||||||||||||||||| | |||||||| ||| |||||||||||||| ||    
T  46625628 ctcattccaaaa-cccaattttaattccctgatcacccaaaacgttttccaacagatgtttacaggttcaatatacaactaggcatctaaaggaacataa 46625726  T
Q  250 aaca 253  Q
    ||||    
T  46625727 aaca 46625730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 10 - 227
Target Start/End: Complemental strand, 11389874 - 11389659
Alignment:
Q  10 gctcgttcactgctcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgc 109  Q
    ||||| ||| || ||||||||||||||||||||||||| |||  |||   ||||||||||||||||||||||| ||||||| | |||||||| |||||      
T  11389874 gctcgctcattgttcgcttaagcgaacgggcaaaatcgcatta-tggacagcttgcttgaatgctcgcttaagcgacgggtcgttcgcttaaccgaccat 11389776  T
Q  110 tcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtt 209  Q
    |||||||||||| | |||| ||||||  ||||||| ||| |||||||||| || ||||||| |||||||||||| || |||| |||||| | ||||||||    
T  11389775 tcatctgggcagtgcaaaa-cctacgggttcagacctcttctcactccaagaatccaattttaatcccctgatcgcctaaaacgttttccagcagatgtt 11389677  T
Q  210 tacaggtcctatatacaa 227  Q
    |||||||| |||||||||    
T  11389676 tacaggtcttatatacaa 11389659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 23 - 227
Target Start/End: Complemental strand, 13123429 - 13123227
Alignment:
Q  23 tcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagg 122  Q
    ||||||||||||||||| | ||||| ||| |||||  | |  |||||||||||||||||| || || |   ||||||||||||||  ||||||||||||     
T  13123429 tcgcttaagcgaacgggtagaatcgcatt-ctgggcagttaccttgaatgctcgcttaagcgatggatgcttcgcttaagcgaccaatcatctgggcagt 13123331  T
Q  123 gtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctata 222  Q
    | |||| |||||| |||||||| ||| ||||||||||||||||||||| |||||||  |||||||||||||||||| | |||||||| ||||||||||||    
T  13123330 gcaaaa-cctacggtttcagacctcttctcactccaaaaacccaattttaatcccccaatcacccaaaatgttttccagcagatgttcacaggtcctata 13123232  T
Q  223 tacaa 227  Q
    |||||    
T  13123231 tacaa 13123227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 16 - 246
Target Start/End: Complemental strand, 29181629 - 29181402
Alignment:
Q  16 tcactgctcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatct 115  Q
    |||||| ||||||||||||||||| ||||||  ||| ||| |  |||  | |||||| ||||||||  |||||||   |||||||||||||| |||||||    
T  29181629 tcactgttcgcttaagcgaacgggtaaaatctaattcctgagcagcta-catgaatgttcgcttaaacgacgggtgcttcgcttaagcgaccactcatct 29181531  T
Q  116 gggcagggtaaaaacctacga-tttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacag 214  Q
    ||||||||| ||||  ||||| |||||||||||||||||||||||||| ||| ||| |||||||||||||||||||| ||||||  | | |||||||||     
T  29181530 gggcagggt-aaaagttacgattttcagacttctcctcactccaaaaa-ccagttttaatcccctgatcacccaaaacgttttc-cataaatgtttacaa 29181434  T
Q  215 gtcctatatacaattagacatctaaaggaaca 246  Q
    |||||||||||||| ||||||| |||||||||    
T  29181433 gtcctatatacaatcagacatcaaaaggaaca 29181402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 16 - 196
Target Start/End: Original strand, 2966501 - 2966680
Alignment:
Q  16 tcactgctcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatct 115  Q
    |||||| ||||||||||||||||| ||||||  ||| |||||| | |  | |||||| ||||||||| ||||| |   ||||||||||||||  ||||||    
T  2966501 tcactgttcgcttaagcgaacgggtaaaatcacatt-ctgggtagttcacgtgaatgttcgcttaagcgacggatgcttcgcttaagcgaccaatcatct 2966599  T
Q  116 gggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttt 196  Q
    ||||||||||||| | |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  2966600 gggcagggtaaaagc-tacgattttcagacttctcctcactccaaaaacccaattttaatcccctgatcacccaaaacgttt 2966680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 23 - 227
Target Start/End: Complemental strand, 12710358 - 12710156
Alignment:
Q  23 tcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagg 122  Q
    ||||||||||||||||| | ||||| ||| |||||  | |  |||||||||||||||||| || || |   ||||||||||||||  ||||||||||||     
T  12710358 tcgcttaagcgaacgggtagaatcgcatt-ctgggcagttaccttgaatgctcgcttaagcgatggatgcttcgcttaagcgaccaatcatctgggcagt 12710260  T
Q  123 gtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctata 222  Q
    | |||| |||||| |||||||| ||| ||||||||||||||||||||| |||||||  || ||||||||||||||| | |||||||| ||||||||||||    
T  12710259 gcaaaa-cctacggtttcagacctcttctcactccaaaaacccaattttaatcccccaattacccaaaatgttttccagcagatgttcacaggtcctata 12710161  T
Q  223 tacaa 227  Q
    |||||    
T  12710160 tacaa 12710156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 67 - 246
Target Start/End: Original strand, 16090659 - 16090837
Alignment:
Q  67 tgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaaccc 165  Q
    |||||| ||||||||| |||| ||   || ||||||| ||| ||||||||||||||||||||   |||||||| ||||||||||||||||||||||||||    
T  16090659 tgaatgttcgcttaagcgacgagtgcttcacttaagcaaccactcatctgggcagggtaaaagt-tacgattttcagacttctcctcactccaaaaaccc 16090757  T
Q  166 aatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaaca 246  Q
    | ||| |||||||||||||||||||| ||||||  | | ||||||||| |||||||||||||| ||||||| |||||||||    
T  16090758 agttttaatcccctgatcacccaaaacgttttc-cagaaatgtttacaagtcctatatacaatcagacatcaaaaggaaca 16090837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 51 - 273
Target Start/End: Original strand, 13664500 - 13664720
Alignment:
Q  51 ttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacga-tttcagacttctc 149  Q
    |||||||| |||| |||||||||||||||||| ||||||| | |||||| ||||| |  |||||| ||||| | |||||||||||  ||||| ||   |     
T  13664500 ttctgggtagcttacttgaatgctcgcttaagcgacgggtcgttcgcttgagcgatcattcatctaggcagtgcaaaaacctacgggtttcaaacccttt 13664599  T
Q  150 ctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaa 249  Q
    ||| |||||||| |||||||| |||||||||||||||||||| |||||| |||| |||||||||||| | ||| |||| ||| |||||||||||||||||    
T  13664600 ctccctccaaaa-cccaattttaatcccctgatcacccaaaacgttttccaaca-atgtttacaggttcaatacacaactaggcatctaaaggaacacaa 13664697  T
Q  250 aacagtcatccaccaacaacaatt 273  Q
    ||||| ||| || |||||||||||    
T  13664698 aacaggcat-caacaacaacaatt 13664720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 72 - 251
Target Start/End: Original strand, 31154984 - 31155163
Alignment:
Q  72 gctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttc 171  Q
    ||||||||||| || |||  | ||||||||||||||  ||||| |  |||||||||||| ||||||||||||||||||  |||||||||||||||||||     
T  31154984 gctcgcttaagcgatgggatgttcgcttaagcgaccattcatcagtacagggtaaaaacttacgatttcagacttctctccactccaaaaacccaatttt 31155083  T
Q  172 aatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaaaa 251  Q
    |||||||||||| |||||||||||||| | |   |||||||||||| |||| |||  ||| |||| ||| ||||||||||    
T  31155084 aatcccctgatcgcccaaaatgttttccagcgattgtttacaggtcttatacacatctaggcatcaaaaagaacacaaaa 31155163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 348 - 551
Target Start/End: Complemental strand, 12590832 - 12590638
Alignment:
Q  348 acagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaacccta 447  Q
    ||||||||||||  ||||||| ||||||||| ||||||| |||  ||||  | |||||| ||| |||| ||||||   |||||||| |||||||||||||    
T  12590832 acagcaacaacatggattaagctttcattcttaacattaaattccaagaaaactaacatcatctttactcattcca--tcagaatcatcatcaaacccta 12590735  T
Q  448 accctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagt 547  Q
    ||  |||   ||||   ||||| ||||||||| | | ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  12590734 actttca---tatt---attttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagt 12590642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 16 - 227
Target Start/End: Complemental strand, 3857884 - 3857676
Alignment:
Q  16 tcactgctcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatct 115  Q
    |||||| ||||||| ||||||||| ||||||  |||||||||  |||  | |||||| ||||||||| ||||| | |||||||||||||||| |||||||    
T  3857884 tcactgttcgcttaggcgaacgggtaaaatctgatttctgggcagcta-catgaatgttcgcttaagcgacggctggctcgcttaagcgaccactcatct 3857786  T
Q  116 gggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacag 214  Q
    || ||||||| |    |||||||| |||||||||| |||||||||||||||||||| |||||||   |||||||||| ||||||  | | |||||||||     
T  3857785 ggacagggtacagt--tacgattttcagacttctcatcactccaaaaacccaattttaatccccaattcacccaaaacgttttc-cagaaatgtttacaa 3857689  T
Q  215 gtcctatatacaa 227  Q
    |||||||||||||    
T  3857688 gtcctatatacaa 3857676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 343 - 543
Target Start/End: Original strand, 16677152 - 16677348
Alignment:
Q  343 tgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaa 442  Q
    ||||||||||||||  | |||||| |  |||||||||||||| |  ||| || |   |||||||||||||||| |  ||||| ||| |||| ||||||||    
T  16677152 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattacaccatcctcctcaaaatcatcatcaaa 16677251  T
Q  443 ccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttacc 542  Q
    |||||||||| |||||    ||  ||   |||||||||| | |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  16677252 ccctaacccttaattt----tatcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacc 16677347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 343 - 543
Target Start/End: Original strand, 17651388 - 17651584
Alignment:
Q  343 tgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaa 442  Q
    ||||||||||||||  | |||||| |  |||||||||||||| |  ||| || |   |||||||||||||||| |  ||||| ||| |||| ||||||||    
T  17651388 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattacaccatcctcctcaaaatcatcatcaaa 17651487  T
Q  443 ccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttacc 542  Q
    |||||||||| |||||    ||  ||   |||||||||| | |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  17651488 ccctaacccttaattt----tatcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacc 17651583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 151 - 251
Target Start/End: Original strand, 14230449 - 14230549
Alignment:
Q  151 tcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaaa 250  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||| | ||  ||||||||||||||||| |||| ||| |||| |||||||||||||    
T  14230449 tcactccaaaaacccaattttaatcccctgatcacccaaaacgttttccagcaattgtttacaggtcctatacacaactaggcatcgaaaggaacacaaa 14230548  T
Q  251 a 251  Q
    |    
T  14230549 a 14230549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 465 - 551
Target Start/End: Original strand, 13007407 - 13007492
Alignment:
Q  465 atttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttg 551  Q
    ||||| ||||||||| | | ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13007407 attttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttg 13007492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 92 - 273
Target Start/End: Original strand, 13679103 - 13679283
Alignment:
Q  92 gctcgcttaagcgaccgctcatctgggcagggtaaaaacctacga-tttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaa 190  Q
    ||||||||||||| ||  |||||||||||| | |||||||||||  ||||| ||   | |||||||||||| || ||||| |||||||||||||||||||    
T  13679103 gctcgcttaagcggccattcatctgggcagtgcaaaaacctacgggtttcaaaccctttctcactccaaaa-cctaattttaatcccctgatcacccaaa 13679201  T
Q  191 atgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaaaacagtcatccaccaacaacaatt 273  Q
    | |||||| || ||||||||| |||| | ||| | || ||| |||||||||||||||||||||| ||| || |||||||||||    
T  13679202 acgttttccaatagatgtttataggttcaatacataactaggcatctaaaggaacacaaaacaggcat-caacaacaacaatt 13679283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 92 - 244
Target Start/End: Original strand, 16676903 - 16677055
Alignment:
Q  92 gctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaa 190  Q
    ||||||||||||||||  |||||||||||| | | ||||||||| ||| ||  | ||| | |||||||||| |||||||| |||||||||||||||||||    
T  16676903 gctcgcttaagcgaccaatcatctgggcagtgcagaaacctacggttttcaaccctcttcacactccaaaa-cccaattttaatcccctgatcacccaaa 16677001  T
Q  191 atgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaa 244  Q
    | |||| | | ||||||||| ||||| |||||||||| ||| ||||||||||||    
T  16677002 acgtttcccagcagatgtttgcaggttctatatacaactaggcatctaaaggaa 16677055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 92 - 244
Target Start/End: Original strand, 17651139 - 17651291
Alignment:
Q  92 gctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaa 190  Q
    ||||||||||||||||  |||||||||||| | | ||||||||| ||| ||  | ||| | |||||||||| |||||||| |||||||||||||||||||    
T  17651139 gctcgcttaagcgaccaatcatctgggcagtgcagaaacctacggttttcaaccctcttcacactccaaaa-cccaattttaatcccctgatcacccaaa 17651237  T
Q  191 atgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaa 244  Q
    | |||| | | ||||||||| ||||| |||||||||| ||| ||||||||||||    
T  17651238 acgtttcccagcagatgtttgcaggttctatatacaactaggcatctaaaggaa 17651291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 16 - 227
Target Start/End: Original strand, 2464899 - 2465108
Alignment:
Q  16 tcactgctcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatct 115  Q
    |||||| ||||||||||||||||| ||||||  | | |||||| | |  | |||||| ||||||||| ||||| |   ||||||||||||||  || |||    
T  2464899 tcactgttcgcttaagcgaacgggtaaaatcacaat-ctgggtagttcacatgaatgttcgcttaagcgacggatgcttcgcttaagcgaccaatcgtct 2464997  T
Q  116 gggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacag 214  Q
    ||||||||||||| | |||||||| ||||||||||||||||||||||||||||||| ||| |||   |||||||||| ||||||    | |||||||||     
T  2464998 gggcagggtaaaagc-tacgattttcagacttctcctcactccaaaaacccaattttaattcccaattcacccaaaacgttttc-ctgaaatgtttacaa 2465095  T
Q  215 gtcctatatacaa 227  Q
    |||||||||||||    
T  2465096 gtcctatatacaa 2465108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 67 - 198
Target Start/End: Complemental strand, 20906930 - 20906799
Alignment:
Q  67 tgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaaccc 165  Q
    |||||| ||||||||| ||||| |   ||||||||||||||  |||||| ||||||||||||   |||||||| |||||||||||||||||||||||||     
T  20906930 tgaatgttcgcttaagcgacggctgcttcgcttaagcgaccaatcatcttggcagggtaaaagt-tacgattttcagacttctcctcactccaaaaacct 20906832  T
Q  166 aatttcaatcccctgatcacccaaaatgttttc 198  Q
    | ||| |||||||||||||||||||| ||||||    
T  20906831 atttttaatcccctgatcacccaaaacgttttc 20906799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 49 - 231
Target Start/End: Complemental strand, 20311540 - 20311359
Alignment:
Q  49 atttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacga-tttcagacttc 147  Q
    |||||||||| |||  | |||||| ||||||||| ||||||| | |||| || |||||   |||||||||| | | |||||||||||  ||||||||       
T  20311540 atttctgggttgctaacatgaatgttcgcttaagcgacgggtcgttcgcataggcgactattcatctgggctgtgcaaaaacctacgggtttcagaccct 20311441  T
Q  148 tcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattag 231  Q
    ||| |||||||||| |||||||| |||||||| ||||||||| |||||||| ||||||||||||||||||| ||| ||||||||    
T  20311440 tcc-cactccaaaa-cccaatttaaatcccctaatcacccaagatgttttccaacagatgtttacaggtccaatacacaattag 20311359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 490 - 545
Target Start/End: Complemental strand, 11382926 - 11382871
Alignment:
Q  490 caattttcaggaattatagattatgattattgagagatagtctcacccttacctta 545  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  11382926 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11382871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 490 - 545
Target Start/End: Complemental strand, 11389403 - 11389348
Alignment:
Q  490 caattttcaggaattatagattatgattattgagagatagtctcacccttacctta 545  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  11389403 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11389348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 490 - 551
Target Start/End: Complemental strand, 21231015 - 21230954
Alignment:
Q  490 caattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttg 551  Q
    |||||||||| ||||||| | |||||||||||||||||||||||||||||||||||| ||||    
T  21231015 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttg 21230954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 490 - 546
Target Start/End: Complemental strand, 20311107 - 20311051
Alignment:
Q  490 caattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 546  Q
    |||||||||| |||||||  |||||||||||||||||||||||||||||||||||||    
T  20311107 caattttcagaaattatacgttatgattattgagagatagtctcacccttaccttag 20311051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 510 - 555
Target Start/End: Complemental strand, 831669 - 831624
Alignment:
Q  510 ttatgattattgagagatagtctcacccttaccttagttttgatga 555  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||    
T  831669 ttataattattgagagttagtctcacccttaccttagttttgatga 831624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 510 - 555
Target Start/End: Complemental strand, 1196849 - 1196804
Alignment:
Q  510 ttatgattattgagagatagtctcacccttaccttagttttgatga 555  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||    
T  1196849 ttataattattgagagttagtctcacccttaccttagttttgatga 1196804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 510 - 555
Target Start/End: Original strand, 34958578 - 34958623
Alignment:
Q  510 ttatgattattgagagatagtctcacccttaccttagttttgatga 555  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||    
T  34958578 ttataattattgagagttagtctcacccttaccttagttttgatga 34958623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 489 - 545
Target Start/End: Original strand, 13679492 - 13679548
Alignment:
Q  489 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 545  Q
    ||||||||||  ||||||| || ||||| ||||| ||||||||||||||||||||||    
T  13679492 tcaattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 13679548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 546
Target Start/End: Original strand, 2971254 - 2971309
Alignment:
Q  491 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 546  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  2971254 aattttcagaaattataaattatgactattgaaagataatcccacccttaccttag 2971309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 546
Target Start/End: Complemental strand, 20906516 - 20906461
Alignment:
Q  491 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 546  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  20906516 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20906461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 515 - 545
Target Start/End: Original strand, 11311083 - 11311113
Alignment:
Q  515 attattgagagatagtctcacccttacctta 545  Q
    |||||||||||||||||||||||||||||||    
T  11311083 attattgagagatagtctcacccttacctta 11311113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 221 - 277
Target Start/End: Complemental strand, 10896108 - 10896053
Alignment:
Q  221 tatacaattagacatctaaaggaacacaaaacagtcatccaccaacaacaattacag 277  Q
    ||||||||||| |||||||||||||| ||||||  ||| || |||||||||||||||    
T  10896108 tatacaattaggcatctaaaggaacataaaacatgcat-caacaacaacaattacag 10896053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 221 - 277
Target Start/End: Original strand, 15167913 - 15167968
Alignment:
Q  221 tatacaattagacatctaaaggaacacaaaacagtcatccaccaacaacaattacag 277  Q
    ||||||||||| |||||||||||||| ||||||  ||| || |||||||||||||||    
T  15167913 tatacaattaggcatctaaaggaacataaaacatgcat-caacaacaacaattacag 15167968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 221 - 277
Target Start/End: Original strand, 18873098 - 18873153
Alignment:
Q  221 tatacaattagacatctaaaggaacacaaaacagtcatccaccaacaacaattacag 277  Q
    ||||||||||| |||||||||||||| ||||||  ||| || |||||||||||||||    
T  18873098 tatacaattaggcatctaaaggaacataaaacatgcat-caacaacaacaattacag 18873153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 489 - 545
Target Start/End: Original strand, 46625961 - 46626017
Alignment:
Q  489 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 545  Q
    ||||||||| | ||||||| ||||| || |||||||| |||||||||||||| ||||    
T  46625961 tcaattttccgaaattatatattataatcattgagagttagtctcacccttatctta 46626017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 135; Significance: 4e-70; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 341 - 550
Target Start/End: Original strand, 22750998 - 22751201
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatca 440  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| | |||||||||| ||||||    
T  22750998 tatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatca 22751097  T
Q  441 aaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcaccctta 540  Q
    ||||||||||||||||||      || || ||||||||||| | ||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||    
T  22751098 aaccctaaccctcaattt------atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagaaagtctcaccctta 22751191  T
Q  541 ccttagtttt 550  Q
    ||||||||||    
T  22751192 ccttagtttt 22751201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 341 - 551
Target Start/End: Complemental strand, 38144734 - 38144531
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatca 440  Q
    |||||||||| |||||  | |||||||||||||||||| ||||||| |||| || || ||||||||||||| |||||||||| || ||||||| ||||||    
T  38144734 tatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccattcccct-cagaatcatcatca 38144636  T
Q  441 aaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcaccctta 540  Q
    |||||||||||||||||||||||       ||||| ||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  38144635 aaccctaaccctcaatttattttc------caaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccctta 38144542  T
Q  541 ccttagttttg 551  Q
    |||||||||||    
T  38144541 ccttagttttg 38144531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 23 - 227
Target Start/End: Original strand, 23528173 - 23528375
Alignment:
Q  23 tcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagg 122  Q
    |||||||||||||| ||||| |||| ||| |||||  ||||||||||||||||| ||||| |||||||   |||||||||||||| |||||||||||||     
T  23528173 tcgcttaagcgaacaggcaacatcgcatt-ctgggcagcttgcttgaatgctcggttaagcgacgggtgcttcgcttaagcgaccactcatctgggcagt 23528271  T
Q  123 gtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctata 222  Q
    | |||| |||||| |||||||| ||| |||||||||||||||| |||| ||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  23528272 gcaaaa-cctacggtttcagacctcttctcactccaaaaaccccattttaatcccctgatcacccaaaatgtttcccaacagatgtttacaggtcctata 23528370  T
Q  223 tacaa 227  Q
    |||||    
T  23528371 tacaa 23528375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 341 - 545
Target Start/End: Complemental strand, 28370252 - 28370055
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatca 440  Q
    |||||||||| |||||  | |||||||||||||||||| |||||||  ||| || || ||||||||||||| |||||||||| || || |||| ||||||    
T  28370252 tatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattcccct-caaaatcatcatca 28370154  T
Q  441 aaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcaccctta 540  Q
    |||||||||||||||||||||||       ||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  28370153 aaccctaaccctcaatttattttc------caaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccctta 28370060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 341 - 545
Target Start/End: Original strand, 19512243 - 19512441
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatca 440  Q
    |||||||||| |||||  | |||||||||||||||||| |||||||  ||| || || ||||||||||||| |||||||||| || || |||| ||||||    
T  19512243 tatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaatagaattaacatgatcaatacccattcccct-caaaatcatcatca 19512341  T
Q  441 aaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcaccctta 540  Q
    |||||||||||||||||||| ||        |||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  19512342 aaccctaaccctcaatttatcttcca-----aaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccctta 19512436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 72 - 251
Target Start/End: Original strand, 34829674 - 34829853
Alignment:
Q  72 gctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttc 171  Q
    ||||||||||| || |||  | |||||||||||||| |||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||     
T  34829674 gctcgcttaagcgatgggatgttcgcttaagcgaccactcatctgggcaaggtaaaaacttacgatttcagacttcttctcactccaaaaacccaatttt 34829773  T
Q  172 aatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaaaa 251  Q
    |||||| |||||||||||||||||||| | ||  |||||||||||| |||| |||| ||| || | |||||| |||||||    
T  34829774 aatcccatgatcacccaaaatgttttccagcaattgtttacaggtcttatacacaactaggcaccgaaaggagcacaaaa 34829853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 72 - 198
Target Start/End: Complemental strand, 24930393 - 24930267
Alignment:
Q  72 gctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaacccaattt 170  Q
    ||||||||||| || |||  | |||||||||||||| |||||||||||||||||| | | |||||||| |||||||||||||||||||||||||||||||    
T  24930393 gctcgcttaagcgatgggatgttcgcttaagcgaccactcatctgggcagggtaacagc-tacgattttcagacttctcctcactccaaaaacccaattt 24930295  T
Q  171 caatcccctgatcacccaaaatgttttc 198  Q
     |||||||||||||||||||||||||||    
T  24930294 taatcccctgatcacccaaaatgttttc 24930267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 16 - 198
Target Start/End: Original strand, 19236435 - 19236616
Alignment:
Q  16 tcactgctcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatct 115  Q
    |||||| ||||||||||||||||| ||||||  ||| |||||| | |  | |||||| |||||||||  |||| |   ||||||||||||||  ||||||    
T  19236435 tcactgttcgcttaagcgaacgggtaaaatcacatt-ctgggtagttcacgtgaatgttcgcttaagcaacggatgcttcgcttaagcgaccaatcatct 19236533  T
Q  116 gggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttc 198  Q
    ||||||||||||| | |||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  19236534 gggcagggtaaaagc-tacgattttcagacctctcctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttc 19236616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 16 - 198
Target Start/End: Original strand, 22467315 - 22467496
Alignment:
Q  16 tcactgctcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatct 115  Q
    |||||| ||||||||||||||||| ||||||  |||  ||||| | |  | |||||| ||||||||| ||||| |   ||||||||||||||  ||||||    
T  22467315 tcactgttcgcttaagcgaacgggtaaaatcacatta-tgggtagttcacgtgaatgttcgcttaagcgacggatgcttcgcttaagcgaccaatcatct 22467413  T
Q  116 gggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttc 198  Q
    ||||||||||||| | |||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||    
T  22467414 gggcagggtaaaagc-tacgattttcagacttctcctcactccaaagacccaattttaatcccctgatcacccaaaacgttttc 22467496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 16 - 198
Target Start/End: Original strand, 22460691 - 22460872
Alignment:
Q  16 tcactgctcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatct 115  Q
    |||||| ||||||||||||||||| ||||||  |||  ||||| | |  | |||||| ||||||||| ||||| |   ||||||||||||||  ||||||    
T  22460691 tcactgttcgcttaagcgaacgggtaaaatcacatta-tgggtagttcacgtgaatgttcgcttaagcgacggatgcttcgcttaagcgaccaatcatct 22460789  T
Q  116 gggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttc 198  Q
    ||||||||||||| | |||||||| ||||||||||||||||||||| |||||| || |||||||||||||||||||| ||||||    
T  22460790 gggcagggtaaaagc-tacgattttcagacttctcctcactccaaagacccaagtttaatcccctgatcacccaaaacgttttc 22460872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 51 - 254
Target Start/End: Complemental strand, 18408428 - 18408228
Alignment:
Q  51 ttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctac-gatttcagacttctc 149  Q
    |||||||  ||||||||||||||||||||||| ||||||| | ||||||||||||||  |||||| || || | |||||||||| | ||||| || | |     
T  18408428 ttctgggcagcttgcttgaatgctcgcttaagcgacgggtcgttcgcttaagcgaccattcatctcggtagtgcaaaaacctacgggtttcaaacctttt 18408329  T
Q  150 ctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaa 249  Q
    |||||||| |||||||||||| ||||||||||||||||||     |||| |||||||| |||||||| |  | ||||| ||| |||||||||||||||||    
T  18408328 ctcactcc-aaaacccaattttaatcccctgatcacccaa---cgtttccaacagatggttacaggttcattgtacaactaggcatctaaaggaacacaa 18408233  T
Q  250 aacag 254  Q
    |||||    
T  18408232 aacag 18408228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 72 - 246
Target Start/End: Original strand, 20772561 - 20772733
Alignment:
Q  72 gctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaacccaattt 170  Q
    ||||||||||| || |||  | |||||||||||||| ||||||||||||||||| |    |||||||| |||||||||||||||||||||||||||||||    
T  20772561 gctcgcttaagcgatggggtgttcgcttaagcgaccactcatctgggcagggtacagt--tacgattttcagacttctcctcactccaaaaacccaattt 20772658  T
Q  171 caatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaaca 246  Q
     ||||||||||| |||||||| ||||||    | ||||||||| |||||||||||||  ||||||| |||| ||||    
T  20772659 taatcccctgattacccaaaacgttttc-ctgaaatgtttacaagtcctatatacaaccagacatcaaaagaaaca 20772733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 348 - 550
Target Start/End: Original strand, 23528497 - 23528690
Alignment:
Q  348 acagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaacccta 447  Q
    ||||||||||||  ||||||| |||| |||| ||||||| |||  ||||  | |||||| ||| |||| ||||||   |||||||| |||||||||||||    
T  23528497 acagcaacaacatggattaagatttcgttcttaacattaaattccaagaaaactaacatcatccttactcattcca--tcagaatcatcatcaaacccta 23528594  T
Q  448 accctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagt 547  Q
    ||  |||  |||||||       ||||||||| | | ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  23528595 actttcatcttattttc------caaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagt 23528687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 67 - 231
Target Start/End: Complemental strand, 22439218 - 22439054
Alignment:
Q  67 tgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacga-tttcagacttctcctcactccaaaaaccc 165  Q
    |||||| ||||||||| ||||||| | |||||||||||||   |||||||| ||| | |||||||||||  ||||| ||   | | |||||||||| |||    
T  22439218 tgaatgttcgcttaagcgacgggtcgttcgcttaagcgactattcatctggacagtgcaaaaacctacgggtttcataccctttcccactccaaaa-ccc 22439120  T
Q  166 aatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattag 231  Q
    ||||| |||||||||||||||||| |||||||| ||||||||||||||| ||| ||| ||||||||    
T  22439119 aatttaaatcccctgatcacccaagatgttttccaacagatgtttacagttccaatacacaattag 22439054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 16 - 246
Target Start/End: Complemental strand, 28889856 - 28889628
Alignment:
Q  16 tcactgctcgcttaagcgaacgggc-aaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatc 114  Q
    |||||| |||||||||||||||||  ||||||  |||||||||  |||  | |||||| ||||||||| ||||| | |||||||||||||||| ||||||    
T  28889856 tcactgttcgcttaagcgaacgggataaaatctgatttctgggcagcta-catgaatgttcgcttaagcgacggctggctcgcttaagcgaccactcatc 28889758  T
Q  115 tgggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttaca 213  Q
    | ||||||||| |    |||||||| ||| ||||||||||||||||||||||||||| |||||||   || ||||||| ||||||  | | |||||||||    
T  28889757 taggcagggtacagt--tacgattttcaggcttctcctcactccaaaaacccaattttaatccccaattcgcccaaaacgttttc-cagaaatgtttaca 28889661  T
Q  214 ggtcctatatacaattagacatctaaaggaaca 246  Q
     |||||||||  ||| ||||||| | |||||||    
T  28889660 agtcctatatgaaatcagacatcaacaggaaca 28889628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 16 - 246
Target Start/End: Complemental strand, 28896560 - 28896332
Alignment:
Q  16 tcactgctcgcttaagcgaacgggc-aaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatc 114  Q
    |||||| |||||||||||||||||  ||||||  |||||||||  |||  | |||||| ||||||||| ||||| | |||||||||||||||| ||||||    
T  28896560 tcactgttcgcttaagcgaacgggataaaatctgatttctgggcagcta-catgaatgttcgcttaagcgacggctggctcgcttaagcgaccactcatc 28896462  T
Q  115 tgggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttaca 213  Q
    | ||||||||| |    |||||||| ||| ||||||||||||||||||||||||||| |||||||   || ||||||| ||||||  | | |||||||||    
T  28896461 taggcagggtacagt--tacgattttcaggcttctcctcactccaaaaacccaattttaatccccaattcgcccaaaacgttttc-cagaaatgtttaca 28896365  T
Q  214 ggtcctatatacaattagacatctaaaggaaca 246  Q
     |||||||||  ||| ||||||| | |||||||    
T  28896364 agtcctatatgaaatcagacatcaacaggaaca 28896332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 16 - 246
Target Start/End: Complemental strand, 28909808 - 28909580
Alignment:
Q  16 tcactgctcgcttaagcgaacgggc-aaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatc 114  Q
    |||||| |||||||||||||||||  ||||||  |||||||||  |||  | |||||| ||||||||| ||||| | |||||||||||||||| ||||||    
T  28909808 tcactgttcgcttaagcgaacgggataaaatctgatttctgggcagcta-catgaatgttcgcttaagcgacggctggctcgcttaagcgaccactcatc 28909710  T
Q  115 tgggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttaca 213  Q
    | ||||||||| |    |||||||| ||| ||||||||||||||||||||||||||| |||||||   || ||||||| ||||||  | | |||||||||    
T  28909709 taggcagggtacagt--tacgattttcaggcttctcctcactccaaaaacccaattttaatccccaattcgcccaaaacgttttc-cagaaatgtttaca 28909613  T
Q  214 ggtcctatatacaattagacatctaaaggaaca 246  Q
     |||||||||  ||| ||||||| | |||||||    
T  28909612 agtcctatatgaaatcagacatcaacaggaaca 28909580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 16 - 246
Target Start/End: Complemental strand, 28925386 - 28925158
Alignment:
Q  16 tcactgctcgcttaagcgaacgggc-aaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatc 114  Q
    |||||| |||||||||||||||||  ||||||  |||||||||  |||  | |||||| ||||||||| ||||| | |||||||||||||||| ||||||    
T  28925386 tcactgttcgcttaagcgaacgggataaaatctgatttctgggcagcta-catgaatgttcgcttaagcgacggctggctcgcttaagcgaccactcatc 28925288  T
Q  115 tgggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttaca 213  Q
    | ||||||||| |    |||||||| ||| ||||||||||||||||||||||||||| |||||||   || ||||||| ||||||  | | |||||||||    
T  28925287 taggcagggtacagt--tacgattttcaggcttctcctcactccaaaaacccaattttaatccccaattcgcccaaaacgttttc-cagaaatgtttaca 28925191  T
Q  214 ggtcctatatacaattagacatctaaaggaaca 246  Q
     |||||||||  ||| ||||||| | |||||||    
T  28925190 agtcctatatgaaatcagacatcaacaggaaca 28925158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 16 - 246
Target Start/End: Complemental strand, 28931500 - 28931272
Alignment:
Q  16 tcactgctcgcttaagcgaacgggc-aaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatc 114  Q
    |||||| |||||||||||||||||  ||||||  |||||||||  |||  | |||||| ||||||||| ||||| | |||||||||||||||| ||||||    
T  28931500 tcactgttcgcttaagcgaacgggataaaatctgatttctgggcagcta-catgaatgttcgcttaagcgacggctggctcgcttaagcgaccactcatc 28931402  T
Q  115 tgggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttaca 213  Q
    | ||||||||| |    |||||||| ||| ||||||||||||||||||||||||||| |||||||   || ||||||| ||||||  | | |||||||||    
T  28931401 taggcagggtacagt--tacgattttcaggcttctcctcactccaaaaacccaattttaatccccaattcgcccaaaacgttttc-cagaaatgtttaca 28931305  T
Q  214 ggtcctatatacaattagacatctaaaggaaca 246  Q
     |||||||||  ||| ||||||| | |||||||    
T  28931304 agtcctatatgaaatcagacatcaacaggaaca 28931272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 16 - 246
Target Start/End: Complemental strand, 28946203 - 28945975
Alignment:
Q  16 tcactgctcgcttaagcgaacgggc-aaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatc 114  Q
    |||||| |||||||||||||||||  ||||||  |||||||||  |||  | |||||| ||||||||| ||||| | |||||||||||||||| ||||||    
T  28946203 tcactgttcgcttaagcgaacgggataaaatctgatttctgggcagcta-catgaatgttcgcttaagcgacggctggctcgcttaagcgaccactcatc 28946105  T
Q  115 tgggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttaca 213  Q
    | ||||||||| |    |||||||| ||| ||||||||||||||||||||||||||| |||||||   || ||||||| ||||||  | | |||||||||    
T  28946104 taggcagggtacagt--tacgattttcaggcttctcctcactccaaaaacccaattttaatccccaattcgcccaaaacgttttc-cagaaatgtttaca 28946008  T
Q  214 ggtcctatatacaattagacatctaaaggaaca 246  Q
     |||||||||  ||| ||||||| | |||||||    
T  28946007 agtcctatatgaaatcagacatcaacaggaaca 28945975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 72 - 246
Target Start/End: Original strand, 20781336 - 20781508
Alignment:
Q  72 gctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaacccaattt 170  Q
    ||||||||||| || |||  | |||||||||||||| ||||| ||||||||||| |    |||||||| |||||||||||||||||||||||||||||||    
T  20781336 gctcgcttaagcgatggggtgttcgcttaagcgaccactcatttgggcagggtacagt--tacgattttcagacttctcctcactccaaaaacccaattt 20781433  T
Q  171 caatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaaca 246  Q
     ||||||||||| ||||||||  |||||    | ||||||||| |||||||||||||  ||||||| |||| ||||    
T  20781434 taatcccctgattacccaaaacattttc-ctgaaatgtttacaagtcctatatacaaccagacatcaaaagaaaca 20781508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 489 - 545
Target Start/End: Complemental strand, 18408000 - 18407944
Alignment:
Q  489 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 545  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  18408000 tcaattttcagaaattatatattatgattattgagagatagtctcacccttacctta 18407944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 490 - 546
Target Start/End: Complemental strand, 22438803 - 22438747
Alignment:
Q  490 caattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 546  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  22438803 caattttcagaaattatacattatgattattgagagatagtctcacccttaccttag 22438747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 489 - 555
Target Start/End: Complemental strand, 23111256 - 23111190
Alignment:
Q  489 tcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgatga 555  Q
    ||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||| ||| |||||    
T  23111256 tcaattttcagaaattatatactatgattattgagagatagtctcacccttaccttaatttagatga 23111190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 72 - 196
Target Start/End: Original strand, 20819811 - 20819934
Alignment:
Q  72 gctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacga-tttcagacttctcctcactccaaaaacccaattt 170  Q
    ||||||||||| || ||| || |||||||||||||| ||||||||||||||||  |    ||||| ||||||||||||| ||||| ||||||||||||||    
T  20819811 gctcgcttaagcgatgggaagttcgcttaagcgaccactcatctgggcagggt--atttttacgattttcagacttctcttcacttcaaaaacccaattt 20819908  T
Q  171 caatcccctgatcacccaaaatgttt 196  Q
     |||||||   |||||||||| ||||    
T  20819909 taatccccaattcacccaaaacgttt 20819934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 72 - 196
Target Start/End: Original strand, 20826911 - 20827034
Alignment:
Q  72 gctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacga-tttcagacttctcctcactccaaaaacccaattt 170  Q
    ||||||||||| || ||| || |||||||||||||| ||||||||||||||||  |    ||||| ||||||||||||| ||||| |||||||||||| |    
T  20826911 gctcgcttaagcgatgggaagttcgcttaagcgaccactcatctgggcagggt--atttttacgattttcagacttctcttcacttcaaaaacccaatat 20827008  T
Q  171 caatcccctgatcacccaaaatgttt 196  Q
     |||||||   |||||||||| ||||    
T  20827009 taatccccaattcacccaaaacgttt 20827034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 546
Target Start/End: Original strand, 19236900 - 19236955
Alignment:
Q  491 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 546  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  19236900 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 19236955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 517 - 546
Target Start/End: Complemental strand, 17021942 - 17021913
Alignment:
Q  517 tattgagagatagtctcacccttaccttag 546  Q
    ||||||||||||||||||||||||||||||    
T  17021942 tattgagagatagtctcacccttaccttag 17021913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 107
Target Start/End: Original strand, 20772370 - 20772403
Alignment:
Q  74 tcgcttaagggacgggtagctcgcttaagcgacc 107  Q
    ||||||||| ||||||||||||||||||||||||    
T  20772370 tcgcttaagcgacgggtagctcgcttaagcgacc 20772403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 107
Target Start/End: Original strand, 20781145 - 20781178
Alignment:
Q  74 tcgcttaagggacgggtagctcgcttaagcgacc 107  Q
    ||||||||| ||||||||||||||||||||||||    
T  20781145 tcgcttaagcgacgggtagctcgcttaagcgacc 20781178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 493 - 546
Target Start/End: Original strand, 22461158 - 22461211
Alignment:
Q  493 ttttcaggaattatagattatgattattgagagatagtctcacccttaccttag 546  Q
    ||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  22461158 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22461211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 493 - 546
Target Start/End: Original strand, 22467782 - 22467835
Alignment:
Q  493 ttttcaggaattatagattatgattattgagagatagtctcacccttaccttag 546  Q
    ||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  22467782 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22467835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 511 - 555
Target Start/End: Complemental strand, 8952075 - 8952031
Alignment:
Q  511 tatgattattgagagatagtctcacccttaccttagttttgatga 555  Q
    ||||||||||||||| ||| ||||||||||||||| ||| |||||    
T  8952075 tatgattattgagagttagcctcacccttaccttaatttagatga 8952031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 221 - 253
Target Start/End: Original strand, 19512125 - 19512157
Alignment:
Q  221 tatacaattagacatctaaaggaacacaaaaca 253  Q
    |||||||||||||||||||||||||| ||||||    
T  19512125 tatacaattagacatctaaaggaacataaaaca 19512157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 221 - 277
Target Start/End: Original strand, 22750879 - 22750934
Alignment:
Q  221 tatacaattagacatctaaaggaacacaaaacagtcatccaccaacaacaattacag 277  Q
    ||||||||||| |||||||||||||| ||||||  ||| || |||||||||||||||    
T  22750879 tatacaattaggcatctaaaggaacataaaacatgcat-caacaacaacaattacag 22750934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 134; Significance: 2e-69; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 341 - 545
Target Start/End: Complemental strand, 14762956 - 14762758
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatca 440  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| | |||||||||| ||||||    
T  14762956 tatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatca 14762857  T
Q  441 aaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcaccctta 540  Q
    ||||||||||||||||||      || || ||||||||||| | ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  14762856 aaccctaaccctcaattt------atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcaccctta 14762763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 341 - 543
Target Start/End: Complemental strand, 20247987 - 20247791
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatca 440  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| | |||||||||| ||||||    
T  20247987 tatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagaaaattaacatgatcattacccatttcccttcagaatcatcatca 20247888  T
Q  441 aaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcaccctta 540  Q
    ||||||||||||||||||      || || ||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  20247887 aaccctaaccctcaattt------atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccctta 20247794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 16 - 259
Target Start/End: Original strand, 24192488 - 24192731
Alignment:
Q  16 tcactgctcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatct 115  Q
    |||||| | ||||||||||||||| ||||||| |||  ||||  ||||||||||||| ||||||||| || || ||  ||||||||||||||  ||||||    
T  24192488 tcactgtttgcttaagcgaacgggaaaaatcgcatta-tgggcagcttgcttgaatgttcgcttaagcgatggctacttcgcttaagcgaccaatcatct 24192586  T
Q  116 gggcagggtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacagg 215  Q
    |||||| | |||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||    
T  24192587 gggcagtgcaaaaacctacgatttcagacctcttctcactccaaaaacccaattttaatcccctgatcacccaaaatgttttccagcagatgtttacagg 24192686  T
Q  216 tcctatatacaattagacatctaaagg-aacacaaaacagtcatc 259  Q
    |||||||||||| ||| |||||||||| |||||||||||| ||||    
T  24192687 tcctatatacaactaggcatctaaaggaaacacaaaacagccatc 24192731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 341 - 543
Target Start/End: Complemental strand, 38310998 - 38310802
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatca 440  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| | |||||||||| ||||||    
T  38310998 tatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatca 38310899  T
Q  441 aaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcaccctta 540  Q
    ||||||||||||||||||      || || ||||||||||| | ||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||    
T  38310898 aaccctaaccctcaattt------atcttccaaaactatgcaattaggtcaatattcagaaattatagattatgattatcgagagatagtctcaccctta 38310805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 23 - 227
Target Start/End: Complemental strand, 41455610 - 41455408
Alignment:
Q  23 tcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagg 122  Q
    ||||||||||||||||| ||||||| ||| |||||  ||||||||||||||||||||||| ||||| |   |||||||||||||| |||||||||||||     
T  41455610 tcgcttaagcgaacgggtaaaatcgcatt-ctgggcagcttgcttgaatgctcgcttaagcgacggattcttcgcttaagcgaccactcatctgggcagt 41455512  T
Q  123 gtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctata 222  Q
    |||||| |||||| |||||||| ||| |||||||||||||||| |||| |||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  41455511 gtaaaa-cctacggtttcagacctcttctcactccaaaaaccccattttaatcccctgatcacccgaaatgttttccaacagatgtttacaggtcctata 41455413  T
Q  223 tacaa 227  Q
    |||||    
T  41455412 tacaa 41455408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 23 - 227
Target Start/End: Complemental strand, 10389959 - 10389757
Alignment:
Q  23 tcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagg 122  Q
    ||||||||||||||||| ||||||| ||| |||||  ||||||||||||||||||||||| |||||||   ||||||||||||||  ||||||||||||     
T  10389959 tcgcttaagcgaacgggtaaaatcgcatt-ctgggcagcttgcttgaatgctcgcttaagcgacgggtgcttcgcttaagcgaccattcatctgggcagt 10389861  T
Q  123 gtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctata 222  Q
    | |||| |||||| ||||||||| || |||||||||||||||| |||| ||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  10389860 gcaaaa-cctacggtttcagactccttctcactccaaaaaccccattttaatcccctgatcacccaaaatgttttccaatagatgtttacaggtcctata 10389762  T
Q  223 tacaa 227  Q
    |||||    
T  10389761 tacaa 10389757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 23 - 227
Target Start/End: Complemental strand, 10415048 - 10414846
Alignment:
Q  23 tcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagg 122  Q
    ||||||||||||||||| ||||||| ||| |||||  ||||||||||||||||||||||| |||||||   ||||||||||||||  ||||||||||||     
T  10415048 tcgcttaagcgaacgggtaaaatcgcatt-ctgggcagcttgcttgaatgctcgcttaagcgacgggtgcttcgcttaagcgaccattcatctgggcagt 10414950  T
Q  123 gtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctata 222  Q
    | |||| |||||| ||||||||| || |||||||||||||||| |||| ||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  10414949 gcaaaa-cctacggtttcagactccttctcactccaaaaaccccattttaatcccctgatcacccaaaatgttttccaatagatgtttacaggtcctata 10414851  T
Q  223 tacaa 227  Q
    |||||    
T  10414850 tacaa 10414846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 23 - 227
Target Start/End: Complemental strand, 10421718 - 10421516
Alignment:
Q  23 tcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagg 122  Q
    ||||||||||||||||| ||||||| ||| |||||  ||||||||||||||||||||||| |||||||   ||||||||||||||  ||||||||||||     
T  10421718 tcgcttaagcgaacgggtaaaatcgcatt-ctgggcagcttgcttgaatgctcgcttaagcgacgggtgcttcgcttaagcgaccattcatctgggcagt 10421620  T
Q  123 gtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctata 222  Q
    | |||| |||||| ||||||||| || |||||||||||||||| |||| ||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  10421619 gcaaaa-cctacggtttcagactccttctcactccaaaaaccccattttaatcccctgatcacccaaaatgttttccaatagatgtttacaggtcctata 10421521  T
Q  223 tacaa 227  Q
    |||||    
T  10421520 tacaa 10421516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 346 - 543
Target Start/End: Original strand, 24192817 - 24193009
Alignment:
Q  346 tcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccc 445  Q
    ||||||||||| || |||||||||||||||||||||||| | |||| || || |||||||||||||||||||||| | |||||||||| |||||||||||    
T  24192817 tcacagcaacagcatagattaagttttcattctgaacatcacattacaacagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccc 24192916  T
Q  446 taaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttacct 543  Q
    |||||||||||||||      ||   |||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  24192917 taaccctcaatttat-----cttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 24193009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 23 - 227
Target Start/End: Complemental strand, 24934341 - 24934139
Alignment:
Q  23 tcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagg 122  Q
    ||||||||||||||||| ||||||| ||| |||||  ||||||||||||||||||||||| |||||||   ||||||||||||||  ||||||||||||     
T  24934341 tcgcttaagcgaacgggtaaaatcgcatt-ctgggcagcttgcttgaatgctcgcttaagcgacgggtgcttcgcttaagcgaccattcatctgggcagt 24934243  T
Q  123 gtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctata 222  Q
    | |||| | |||| ||||||||| || |||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  24934242 gcaaaa-catacggtttcagactccttctcactccaaaaaccccattttaatcccctgatcacccaaaatgttttccaacagatgtttacatgtcctata 24934144  T
Q  223 tacaa 227  Q
    |||||    
T  24934143 tacaa 24934139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 23 - 273
Target Start/End: Complemental strand, 16801980 - 16801731
Alignment:
Q  23 tcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagg 122  Q
    ||||||||||||||| ||||||||||||| |||||  | ||||||||||||||||||||| |||||||   ||||||||||||||  ||||||||||||     
T  16801980 tcgcttaagcgaacgcgcaaaatcgtatt-ctgggcagtttgcttgaatgctcgcttaagcgacgggtccttcgcttaagcgaccattcatctgggcagt 16801882  T
Q  123 gtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctata 222  Q
      ||||||||||||||||| || ||| |||||||||||||||||| || ||||||||||||||  ||||||||||| | ||||||||||||||| |||||    
T  16801881 acaaaaacctacgatttcatacctcttctcactccaaaaacccaactttaatcccctgatcacttaaaatgttttccagcagatgtttacaggttctata 16801782  T
Q  223 tacaattagacatct-aaaggaacacaaaacagtcatccaccaacaacaatt 273  Q
    ||||| ||  ||||| ||||| | ||||||||| ||| || |||||||||||    
T  16801781 tacaactaagcatctaaaagggatacaaaacaggcat-caacaacaacaatt 16801731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 361 - 545
Target Start/End: Original strand, 9534205 - 9534382
Alignment:
Q  361 agattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttat 460  Q
    |||||||||||||||||| ||||||| |||| || || ||||||||||||| |||||||||| || ||||||| ||||||||||||||||||||||||||    
T  9534205 agattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattccact-cagaatcatcatcaaaccctaaccctcaatttat 9534303  T
Q  461 tttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 545  Q
    |||       ||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9534304 tttc------caaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 9534382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 65 - 273
Target Start/End: Complemental strand, 13313368 - 13313161
Alignment:
Q  65 cttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaaaaacc 164  Q
    |||||||||||||||||| || |||| | |||||||||||||  ||||||||||||||  |||||||||||  || |||| ||| |||||||||||||||    
T  13313368 cttgaatgctcgcttaagcgatgggtcgttcgcttaagcgacgactcatctgggcaggccaaaaacctacgggtttagacctcttctcactccaaaaacc 13313269  T
Q  165 caatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaaaacagtcatccacca 264  Q
    |||||| ||||||||||| |||||||| |||||| | || ||||||||||||||||||||||| ||  |||||||||||||||||||||| ||| || ||    
T  13313268 caattttaatcccctgatgacccaaaacgttttccagcaaatgtttacaggtcctatatacaactatgcatctaaaggaacacaaaacaggcat-caaca 13313170  T
Q  265 acaacaatt 273  Q
    |||||||||    
T  13313169 acaacaatt 13313161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 92 - 273
Target Start/End: Complemental strand, 13302685 - 13302505
Alignment:
Q  92 gctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaa 191  Q
    |||||||||||||||  ||||||||||||||  |||||||||||  || |||| ||| ||||||||||||||||||||| ||||||||||||||||||||    
T  13302685 gctcgcttaagcgacgactcatctgggcaggccaaaaacctacgggtttagacctcttctcactccaaaaacccaattttaatcccctgatcacccaaaa 13302586  T
Q  192 tgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaaaacagtcatccaccaacaacaatt 273  Q
     |||||| | || ||||||||||||||||||||||| ||| |||||||||||||||||||||| ||| || |||||||||||    
T  13302585 cgttttccagcaaatgtttacaggtcctatatacaactaggcatctaaaggaacacaaaacaggcat-caacaacaacaatt 13302505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 10 - 246
Target Start/End: Original strand, 14865374 - 14865608
Alignment:
Q  10 gctcgttcactgctcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgc 109  Q
    ||||| |||||| ||||||||||||||||| ||||||  |||||||||  |||  | |||||| ||||||||| ||||||||  |||||||||||||| |    
T  14865374 gctcgctcactgttcgcttaagcgaacgggtaaaatctaatttctgggcagcta-catgaatgttcgcttaagcgacgggtacttcgcttaagcgaccac 14865472  T
Q  110 tcatctgggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgt 208  Q
    || ||||||| ||||||||   |||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||| | | ||||    
T  14865473 tcttctgggcggggtaaaagt-tacgattttcagacttctcctcactccaaaaacccagttttaatcccctgatcacccaaaacgttttct-agaaatgt 14865570  T
Q  209 ttacaggtcctatatacaattagacatctaaaggaaca 246  Q
    ||||| |||||||||||||| ||||||| | |||||||    
T  14865571 ttacaagtcctatatacaatcagacatcaacaggaaca 14865608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 65 - 273
Target Start/End: Complemental strand, 13324260 - 13324053
Alignment:
Q  65 cttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaaaaacc 164  Q
    |||||||||||||||||| ||  ||| | |||||||||||||| ||||| ||||||||| |||||||||||  ||||||| ||| |||||||||||||||    
T  13324260 cttgaatgctcgcttaagcgattggtcgttcgcttaagcgaccactcatttgggcagggcaaaaacctacgggttcagacctcttctcactccaaaaacc 13324161  T
Q  165 caatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaaaacagtcatccacca 264  Q
    ||  || |||||||||||||||||||| |||||| | || ||||||| |||| ||||||||||  || |||||||||||||||||||||| ||| || ||    
T  13324160 catatttaatcccctgatcacccaaaacgttttccagcaaatgtttataggtgctatatacaaccaggcatctaaaggaacacaaaacaggcat-caaca 13324062  T
Q  265 acaacaatt 273  Q
    |||||||||    
T  13324061 acaacaatt 13324053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 60 - 273
Target Start/End: Complemental strand, 17240989 - 17240778
Alignment:
Q  60 gcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaa 159  Q
    |||||||||||||||| |||||| ||||||| | ||||||||||||||  |||||||| ||| | |||||||||||  |||| || ||| ||||||||||    
T  17240989 gcttgcttgaatgctcacttaagcgacgggtcgttcgcttaagcgaccattcatctggacagtgcaaaaacctacgggttcaaacctcttctcactccaa 17240890  T
Q  160 aaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaaaacagtcatc 259  Q
    || |||||||| |||||||||||||||||||| |||||| ||||||||||||||||| | ||| |||| ||| ||||||||||||  |||||||| |||     
T  17240889 aa-cccaattttaatcccctgatcacccaaaacgttttccaacagatgtttacaggttcaatacacaactaggcatctaaaggaattcaaaacaggcat- 17240792  T
Q  260 caccaacaacaatt 273  Q
    || |||||||||||    
T  17240791 caacaacaacaatt 17240778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 341 - 546
Target Start/End: Complemental strand, 23370704 - 23370505
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatca 440  Q
    |||||||||| |||||  | |||||||||||||||||| ||||||| |||| || || ||||||||||||| |||||||||| | |||||||| ||||||    
T  23370704 tatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcc-cctcagaatcatcatca 23370606  T
Q  441 aaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcaccctta 540  Q
    ||||||||||| ||||||||      ||   |||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  23370605 aaccctaacccacaatttat-----cttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtcccaccctta 23370511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 72 - 198
Target Start/End: Complemental strand, 19235533 - 19235407
Alignment:
Q  72 gctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaacccaattt 170  Q
    ||||||||||| || |||  | |||||||||||||| |||||||||||||||||| | | |||||||| |||||||||||||||||||||||||||||||    
T  19235533 gctcgcttaagcgatgggatgttcgcttaagcgaccactcatctgggcagggtaacagc-tacgattttcagacttctcctcactccaaaaacccaattt 19235435  T
Q  171 caatcccctgatcacccaaaatgttttc 198  Q
     |||||||||||||||||||||||||||    
T  19235434 taatcccctgatcacccaaaatgttttc 19235407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 77 - 254
Target Start/End: Original strand, 18928837 - 18929014
Alignment:
Q  77 cttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacga-tttcagacttctcctcactccaaaaacccaatttcaatc 175  Q
    |||||| ||||||| | ||||||||||||||  |||| ||| | | | |||||||||||  ||||| ||   | |||||||||||| | |||||| ||||    
T  18928837 cttaagcgacgggtcgttcgcttaagcgaccattcatttggactgagcaaaaacctacgggtttcaaaccctttctcactccaaaa-cacaattttaatc 18928935  T
Q  176 ccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaaaacag 254  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||| |||| ||| ||||||||||||||||||||||    
T  18928936 ccctgatcacccaaaatgtttcctaacagatgtttacaggtccaatacacaactaggcatctaaaggaacacaaaacag 18929014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 67 - 198
Target Start/End: Original strand, 17131316 - 17131447
Alignment:
Q  67 tgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaaccc 165  Q
    |||||| ||||||||| ||||| |   ||||||||||||||  ||||||||||||||||||| | |||||||| ||||||||||||||||||||||| ||    
T  17131316 tgaatgttcgcttaagcgacggatgcttcgcttaagcgaccaatcatctgggcagggtaaaagc-tacgattttcagacttctcctcactccaaaaatcc 17131414  T
Q  166 aatttcaatcccctgatcacccaaaatgttttc 198  Q
    ||||| |||||||||||||||||||| ||||||    
T  17131415 aattttaatcccctgatcacccaaaacgttttc 17131447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 18 - 198
Target Start/End: Complemental strand, 12033963 - 12033783
Alignment:
Q  18 actgctcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgg 117  Q
    |||| ||||||||||||||||| ||||||  |||| ||||  |||  | |||||| ||||||||| ||||| |   || |||||||||||| ||||||||    
T  12033963 actgttcgcttaagcgaacgggtaaaatctaatttttgggcagcta-catgaatgttcgcttaagcgacggatgcttctcttaagcgaccgatcatctgg 12033865  T
Q  118 gcagggtaaaaacctacgattt-cagacttctcctcactccaaaaacccaa-tttcaatcccctgatcacccaaaatgttttc 198  Q
    | ||||||||| | |||||||| |||||||||||| ||||||||||||||| ||| |||||| ||||||||||||| ||||||    
T  12033864 gtagggtaaaagc-tacgattttcagacttctcctaactccaaaaacccaatttttaatcccatgatcacccaaaacgttttc 12033783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 465 - 551
Target Start/End: Complemental strand, 41455177 - 41455092
Alignment:
Q  465 atttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttg 551  Q
    ||||| ||||||||| | | ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41455177 attttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttg 41455092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 349 - 546
Target Start/End: Complemental strand, 24934016 - 24933828
Alignment:
Q  349 cagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaa 448  Q
    |||||||||||  ||||||| ||||||||| ||||||| |||   |||  | |||||| ||| |||| ||||||   |||||||| ||||||||||||||    
T  24934016 cagcaacaacatggattaagctttcattcttaacattaaattccgagaaaactaacatcatctttactcattcca--tcagaatcatcatcaaaccctaa 24933919  T
Q  449 ccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 546  Q
       |||   ||||   ||||| ||||||||| | | ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  24933918 ttttca---tatt---attttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttag 24933828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 74 - 227
Target Start/End: Complemental strand, 55499569 - 55499416
Alignment:
Q  74 tcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaacccaatttca 172  Q
    ||||||||| ||||| | | ||||||||||||||  |||||||||||| | | ||||||||| ||| ||  | ||| | |||||||||| |||||||| |    
T  55499569 tcgcttaagtgacggctggttcgcttaagcgaccattcatctgggcagtgcagaaacctacggttttcaaccctcttcacactccaaaa-cccaatttta 55499471  T
Q  173 atcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaa 227  Q
    ||||||||||||||||||| |||||| | ||||||||||||||| ||||| ||||    
T  55499470 atcccctgatcacccaaaacgttttccagcagatgtttacaggttctatacacaa 55499416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 341 - 458
Target Start/End: Complemental strand, 55499301 - 55499185
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatca 440  Q
    |||||||||||||||   | |||||||| |||||||| |||||| | |||| || |  |||||||||||||||||||||||| | |||||||| ||||||    
T  55499301 tatgatcacagcaactgtatagattaagatttcattccgaacatcacattacaacataattaacatgatcattacccattcc-cctcagaatcatcatca 55499203  T
Q  441 aaccctaaccctcaattt 458  Q
    ||||||||||||||||||    
T  55499202 aaccctaaccctcaattt 55499185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 486 - 551
Target Start/End: Complemental strand, 16801526 - 16801462
Alignment:
Q  486 aggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttg 551  Q
    |||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  16801526 aggtcaattttcagaaattatatat-atgattattgagagatagtctcacccttaccttagttttg 16801462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 489 - 545
Target Start/End: Original strand, 18929244 - 18929300
Alignment:
Q  489 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 545  Q
    ||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||    
T  18929244 tcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18929300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 489 - 545
Target Start/End: Complemental strand, 17240569 - 17240513
Alignment:
Q  489 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 545  Q
    ||||||||||| ||||||  |||| ||||||||||||||||||||||||||||||||    
T  17240569 tcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 17240513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 23 - 102
Target Start/End: Complemental strand, 55499639 - 55499561
Alignment:
Q  23 tcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaag 102  Q
    ||||||||||||||||| ||||||| ||| |||||  ||||||||||||||||||||||| ||||| | | |||||||||    
T  55499639 tcgcttaagcgaacgggaaaaatcgcatt-ctgggcagcttgcttgaatgctcgcttaagcgacggctggttcgcttaag 55499561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 491 - 546
Target Start/End: Complemental strand, 13302295 - 13302240
Alignment:
Q  491 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 546  Q
    ||||||||| ||||| | |||||||||||||| ||||| |||||||||||||||||    
T  13302295 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttag 13302240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 491 - 546
Target Start/End: Complemental strand, 13323842 - 13323787
Alignment:
Q  491 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 546  Q
    ||||||||| ||||| | |||||||||||||| ||||| |||||||||||||||||    
T  13323842 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttag 13323787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 546
Target Start/End: Complemental strand, 12033499 - 12033444
Alignment:
Q  491 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 546  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  12033499 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 12033444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 546
Target Start/End: Complemental strand, 13312951 - 13312896
Alignment:
Q  491 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 546  Q
    ||||||||  ||||| | |||||||||||||| ||||| |||||||||||||||||    
T  13312951 aattttcaaaaattacatattatgattattgaaagataatctcacccttaccttag 13312896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 546
Target Start/End: Original strand, 17131732 - 17131787
Alignment:
Q  491 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 546  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  17131732 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 17131787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 511 - 546
Target Start/End: Complemental strand, 23392854 - 23392819
Alignment:
Q  511 tatgattattgagagatagtctcacccttaccttag 546  Q
    ||||||||||||||| ||||||||||||||||||||    
T  23392854 tatgattattgagagttagtctcacccttaccttag 23392819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 546
Target Start/End: Original strand, 51301589 - 51301644
Alignment:
Q  491 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 546  Q
    ||||||||| ||||| | |||||||||||||  ||||| |||||||||||||||||    
T  51301589 aattttcagaaattacatattatgattattggaagataatctcacccttaccttag 51301644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 510 - 546
Target Start/End: Complemental strand, 2247685 - 2247649
Alignment:
Q  510 ttatgattattgagagatagtctcacccttaccttag 546  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  2247685 ttataattattgagagttagtctcacccttaccttag 2247649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 221 - 253
Target Start/End: Original strand, 9534067 - 9534099
Alignment:
Q  221 tatacaattagacatctaaaggaacacaaaaca 253  Q
    |||||||||||||||||||||||||| ||||||    
T  9534067 tatacaattagacatctaaaggaacataaaaca 9534099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 527 - 555
Target Start/End: Complemental strand, 10833327 - 10833299
Alignment:
Q  527 tagtctcacccttaccttagttttgatga 555  Q
    |||||||||||||||||||||||||||||    
T  10833327 tagtctcacccttaccttagttttgatga 10833299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 221 - 277
Target Start/End: Complemental strand, 14763075 - 14763020
Alignment:
Q  221 tatacaattagacatctaaaggaacacaaaacagtcatccaccaacaacaattacag 277  Q
    ||||||||||| |||||||||||||| ||||||  ||| || |||||||||||||||    
T  14763075 tatacaattaggcatctaaaggaacataaaacatgcat-caacaacaacaattacag 14763020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 205 - 253
Target Start/End: Original strand, 16800747 - 16800795
Alignment:
Q  205 atgtttacaggtcctatatacaattagacatctaaaggaacacaaaaca 253  Q
    ||||||| |||| | |||||||||||| |||||||||||||| ||||||    
T  16800747 atgtttataggttcaatatacaattaggcatctaaaggaacataaaaca 16800795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 221 - 277
Target Start/End: Complemental strand, 20248098 - 20248043
Alignment:
Q  221 tatacaattagacatctaaaggaacacaaaacagtcatccaccaacaacaattacag 277  Q
    ||||||||||| |||||||||||||| ||||||  ||| || |||||||||||||||    
T  20248098 tatacaattaggcatctaaaggaacataaaacatgcat-caacaacaacaattacag 20248043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 221 - 277
Target Start/End: Complemental strand, 38311117 - 38311062
Alignment:
Q  221 tatacaattagacatctaaaggaacacaaaacagtcatccaccaacaacaattacag 277  Q
    ||||||||||| |||||||||||||| ||||||  ||| || |||||||||||||||    
T  38311117 tatacaattaggcatctaaaggaacataaaacatgcat-caacaacaacaattacag 38311062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 511 - 555
Target Start/End: Complemental strand, 52337990 - 52337946
Alignment:
Q  511 tatgattattgagagatagtctcacccttaccttagttttgatga 555  Q
    ||||||||||||||| ||| ||||||||||||||| || ||||||    
T  52337990 tatgattattgagagttagcctcacccttaccttaattctgatga 52337946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 131; Significance: 1e-67; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 23 - 273
Target Start/End: Complemental strand, 11522 - 11275
Alignment:
Q  23 tcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagg 122  Q
    ||||||||||||||||  |||| |  | |||| ||| ||| ||||||||||||||||||| ||| ||||||||||| |||||||  ||||||||||||||    
T  11522 tcgcttaagcgaacggctaaaaac-aaattctaggttgctagcttgaatgctcgcttaagcgacaggtagctcgctcaagcgacaactcatctgggcagg 11424  T
Q  123 gtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctata 222  Q
    |||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||| ||||||||||||| | || ||||||||||||||||||    
T  11423 gtaaaaacctacgatttcagacttctcctcactccaaacacgcaattttaatcccctgatca-ccaaaatgttttccagcaaatgtttacaggtcctata 11325  T
Q  223 tacaattagacatctaaaggaacacaaaacagtcatccaccaacaacaatt 273  Q
     ||| |||| |||||||||||||||||||||| ||| || |||||||||||    
T  11324 cacagttaggcatctaaaggaacacaaaacagacat-caacaacaacaatt 11275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 126; Significance: 1e-64; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 23 - 244
Target Start/End: Complemental strand, 14911 - 14691
Alignment:
Q  23 tcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagg 122  Q
    ||||||||||||||||||||||||| ||| |||||  ||||||||||||| ||||||||| || || ||  ||||||||||||||  ||||||||||||     
T  14911 tcgcttaagcgaacgggcaaaatcgcatt-ctgggcagcttgcttgaatgttcgcttaagcgatggctacttcgcttaagcgaccaatcatctgggcagt 14813  T
Q  123 gtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctata 222  Q
    | |||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||| ||||||||||    
T  14812 gcaaaaacctacgatttcagacctcttctcactccaaaaacccaattttaatcccctgatcacccaaaatgttttccagcagatgtttataggtcctata 14713  T
Q  223 tacaattagacatctaaaggaa 244  Q
    ||||| |||  |||||||||||    
T  14712 tacaactaggtatctaaaggaa 14691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 341 - 543
Target Start/End: Complemental strand, 14595 - 14398
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatca 440  Q
    |||||||||||||||| || ||||||||||||||||| |||||| | |||| || || |||||||||||||||||||||| | |||||||||| ||||||    
T  14595 tatgatcacagcaacagcatagattaagttttcattcggaacatcacattacaacagaattaacatgatcattacccatttcccttcagaatcatcatca 14496  T
Q  441 aaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcaccctta 540  Q
    ||||||||||||||||||||      ||   |||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  14495 aaccctaaccctcaatttat-----cttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccctta 14401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 119; Significance: 2e-60; HSPs: 2)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 341 - 551
Target Start/End: Complemental strand, 949 - 745
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatca 440  Q
    |||||||||| ||||||||| ||||||||||| || ||||||||||||||| ||||| |||| ||||||||||||||||| | ||||| |||| ||||||    
T  949 tatgatcacatcaacaacaa-gattaagtttttatcctgaacattatattacaagagtattatcatgatcattacccatttcccttcataatcctcatca 851  T
Q  441 aaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcaccctta 540  Q
    ||||||||||||||||||||     |||   |||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  850 aaccctaaccctcaatttat-----tttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccctta 756  T
Q  541 ccttagttttg 551  Q
    |||||||||||    
T  755 ccttagttttg 745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 23 - 253
Target Start/End: Complemental strand, 1265 - 1036
Alignment:
Q  23 tcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagg 122  Q
    |||||| |||||||||| ||||||| ||| |||||  | || ||||||||||| |||||| ||||| |   ||||||||||||||  ||||||||||||     
T  1265 tcgcttgagcgaacgggtaaaatcgcatt-ctgggcagtttccttgaatgctcacttaagcgacggatgcttcgcttaagcgaccaatcatctgggcagt 1167  T
Q  123 gtaaaaacctacgatttcagacttctcctcactccaaaaac-ccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctat 221  Q
    | |||| |||||| |||||||| ||| |||||||||||||  ||||||| |||||||  |||||||||||||||||| | ||||||||||||||||||||    
T  1166 gcaaaa-cctacggtttcagacctcttctcactccaaaaaaaccaattttaatcccccaatcacccaaaatgttttccagcagatgtttacaggtcctat 1068  T
Q  222 atacaattagacatctaaaggaacacaaaaca 253  Q
    |||||| ||  ||||||| | |||| ||||||    
T  1067 atacaactaagcatctaaggaaacataaaaca 1036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 118; Significance: 6e-60; HSPs: 2)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 64 - 277
Target Start/End: Original strand, 3244 - 3455
Alignment:
Q  64 gcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaaaaac 163  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||  |||||| || |  ||||||| ||||||||||||||||||    
T  3244 gcttgaatgttcgcttaagcgacgggtagctcgcttaagcgaccattcatctgggcaggc-aaaaacttatgggttcagacctctcctcactccaaaaac 3342  T
Q  164 ccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaaaacagtcatccacc 263  Q
    |||| || |||||||||||||||||||| |||||| ||||||||||||||||| ||||| |||| ||| |||||||||||||||||||||| ||| || |    
T  3343 ccaactttaatcccctgatcacccaaaacgttttccaacagatgtttacaggttctatacacaactaggcatctaaaggaacacaaaacagccat-caac 3441  T
Q  264 aacaacaattacag 277  Q
    ||||||||||||||    
T  3442 aacaacaattacag 3455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 380
Target Start/End: Original strand, 3519 - 3558
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctga 380  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  3519 tatgatcacagcaacaacaaagattaagttttcattctga 3558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 117; Significance: 2e-59; HSPs: 3)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 10 - 254
Target Start/End: Complemental strand, 41055 - 40812
Alignment:
Q  10 gctcgttcactgctcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgc 109  Q
    ||||| |||||| || ||||||||||| | |||||||| ||| |||||  ||||||||||||||||||||||| ||||||| | ||||||||| ||||      
T  41055 gctcgctcactgttcccttaagcgaactgacaaaatcgcatt-ctgggcagcttgcttgaatgctcgcttaagcgacgggtcgttcgcttaagtgaccat 40957  T
Q  110 tcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtt 209  Q
    |||||||||||| | |||| ||||||  |||| || ||| |||||||||||| |||||||| |||||||||||||||||||| |||||| | ||||||||    
T  40956 tcatctgggcagtgcaaaagcctacgggttcaaacctcttctcactccaaaagcccaattttaatcccctgatcacccaaaacgttttccagcagatgtt 40857  T
Q  210 tacaggtcctatatacaattagacatctaaaggaacacaaaacag 254  Q
    ||||||||||||| |||| ||| ||||||||||||||||||||||    
T  40856 tacaggtcctatacacaactaggcatctaaaggaacacaaaacag 40812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 490 - 551
Target Start/End: Complemental strand, 40587 - 40526
Alignment:
Q  490 caattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttg 551  Q
    |||||||||| ||||||| | |||||||||||||||||||||||||||||||||||| ||||    
T  40587 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttg 40526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 511 - 555
Target Start/End: Original strand, 3905 - 3949
Alignment:
Q  511 tatgattattgagagatagtctcacccttaccttagttttgatga 555  Q
    ||||||||||||||| ||| ||||||||||||||| || ||||||    
T  3905 tatgattattgagagttagcctcacccttaccttaattctgatga 3949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 116; Significance: 1e-58; HSPs: 3)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 10 - 253
Target Start/End: Complemental strand, 23120 - 22878
Alignment:
Q  10 gctcgttcactgctcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgc 109  Q
    ||||| |||||| |||||||||||||| | |||||||| ||| ||||   ||||||||||||||||||||||| ||||||| | ||||||||||||||      
T  23120 gctcgctcactgttcgcttaagcgaactgacaaaatcgcatt-ctggacagcttgcttgaatgctcgcttaagcgacgggtcgttcgcttaagcgaccat 23022  T
Q  110 tcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtt 209  Q
    ||||||||| || | |||||||||||  || | || ||| ||||||||||||||||||||| |||||||||||||||||||| |||||| | ||||||||    
T  23021 tcatctgggtagtgcaaaaacctacgggtttaaacctcttctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttccagcagatgtt 22922  T
Q  210 tacaggtcctatatacaattagacatctaaaggaacacaaaaca 253  Q
    ||||||||| ||| |||| ||| |||||||||||||||||||||    
T  22921 tacaggtccgatacacaactaggcatctaaaggaacacaaaaca 22878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 150 - 273
Target Start/End: Complemental strand, 15323 - 15201
Alignment:
Q  150 ctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaa 249  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||| | ||||||||||||||||||||| |||| ||| |||||||||||||||||    
T  15323 ctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttccagcagatgtttacaggtcctatacacaactaggcatctaaaggaacacaa 15224  T
Q  250 aacagtcatccaccaacaacaatt 273  Q
    ||||| ||| || |||||||||||    
T  15223 aacaggcat-caacaacaacaatt 15201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 492 - 544
Target Start/End: Complemental strand, 22646 - 22594
Alignment:
Q  492 attttcaggaattatagattatgattattgagagatagtctcacccttacctt 544  Q
    |||||||| ||||||| | ||||||||||||||||||||||||||||||||||    
T  22646 attttcagaaattatatactatgattattgagagatagtctcacccttacctt 22594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 115; Significance: 4e-58; HSPs: 6)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 10 - 244
Target Start/End: Original strand, 565 - 797
Alignment:
Q  10 gctcgttcactgctcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgc 109  Q
    ||||| |||||| ||||||||||||||||||||||||| |||| ||||  ||||||||||||| ||||||||| ||||| ||  |||||||||||||       
T  565 gctcgctcactgttcgcttaagcgaacgggcaaaatcgcattt-tgggcagcttgcttgaatgttcgcttaagcgacggctacttcgcttaagcgactaa 663  T
Q  110 tcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtt 209  Q
    |||||||| ||| | ||||||||||| ||||||||  || ||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||    
T  664 tcatctgg-cagtgcaaaaacctacggtttcagaccccttctcactccaaaaacccaattttaatcccctgatcacccaaaatgttttccagcagatgtt 762  T
Q  210 tacaggtcctatatacaattagacatctaaaggaa 244  Q
    |||||||||||||||||| |||   ||||||||||    
T  763 tacaggtcctatatacaactaggtgtctaaaggaa 797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 10 - 244
Target Start/End: Original strand, 7710 - 7942
Alignment:
Q  10 gctcgttcactgctcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgc 109  Q
    ||||| |||||| ||||||||||||||||||||||||| |||| ||||  ||||||||||||| ||||||||| ||||| ||  |||||||||||||       
T  7710 gctcgctcactgttcgcttaagcgaacgggcaaaatcgcattt-tgggcagcttgcttgaatgttcgcttaagcgacggctacttcgcttaagcgactaa 7808  T
Q  110 tcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtt 209  Q
    |||||||| ||| | ||||||||||| ||||||||  || ||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||    
T  7809 tcatctgg-cagtgcaaaaacctacggtttcagaccccttctcactccaaaaacccaattttaatcccctgatcacccaaaatgttttccagcagatgtt 7907  T
Q  210 tacaggtcctatatacaattagacatctaaaggaa 244  Q
    |||||||||||||||||| |||   ||||||||||    
T  7908 tacaggtcctatatacaactaggtgtctaaaggaa 7942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 475 - 550
Target Start/End: Original strand, 916 - 991
Alignment:
Q  475 actatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagtttt 550  Q
    ||||||| | ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  916 actatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagtttt 991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 475 - 550
Target Start/End: Original strand, 8061 - 8136
Alignment:
Q  475 actatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagtttt 550  Q
    ||||||| | ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  8061 actatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagtttt 8136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 384
Target Start/End: Original strand, 846 - 889
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacat 384  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  846 tatgatcacagcaacaacacagattaagttttcattctgaacat 889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 384
Target Start/End: Original strand, 7991 - 8034
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacat 384  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  7991 tatgatcacagcaacaacacagattaagttttcattctgaacat 8034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 111; Significance: 9e-56; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 51 - 273
Target Start/End: Original strand, 18712368 - 18712588
Alignment:
Q  51 ttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgatttcagacttctcc 150  Q
    |||||||  ||||||||||||||||||||||| ||||||| | ||||||||||||||  |||||||||||| | |||||||||||  |||| || |||||    
T  18712368 ttctgggcagcttgcttgaatgctcgcttaagcgacgggtcgttcgcttaagcgaccattcatctgggcagtgcaaaaacctacgggttcaaacctctcc 18712467  T
Q  151 tcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaaa 250  Q
    ||||||||||| |||||||| | |||||||||||||||||| |||||| ||||||||||||||||| | ||| |||| ||| ||||||||||||||||||    
T  18712468 tcactccaaaa-cccaattttagtcccctgatcacccaaaacgttttccaacagatgtttacaggttcaatacacaactaggcatctaaaggaacacaaa 18712566  T
Q  251 acagtcatccaccaacaacaatt 273  Q
    |||| ||| || |||||||||||    
T  18712567 acagacat-caacaacaacaatt 18712588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 341 - 555
Target Start/End: Complemental strand, 20437222 - 20437014
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatca 440  Q
    |||||||||| |||||  | |||||||||||||||||||||||||| |||| || |  ||||||||||||| |||||||||| || ||||||| ||||||    
T  20437222 tatgatcacaacaacagtatagattaagttttcattctgaacattacattacaacataattaacatgatcaatacccattcccct-cagaatcatcatca 20437124  T
Q  441 aaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcaccctta 540  Q
    |||||||||||||||||||| ||        |||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  20437123 aaccctaaccctcaatttatcttcca-----aaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccctta 20437029  T
Q  541 ccttagttttgatga 555  Q
    ||||| ||| |||||    
T  20437028 ccttaatttagatga 20437014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 92 - 223
Target Start/End: Original strand, 19961779 - 19961909
Alignment:
Q  92 gctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaa 191  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  19961779 gctcgcttaagcgaccactcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaaaaacccaattttaatcccctgatca-ccaaaa 19961877  T
Q  192 tgttttctaacagatgtttacaggtcctatat 223  Q
     |||||| | || |||||||||||||||||||    
T  19961878 cgttttccagcaaatgtttacaggtcctatat 19961909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 16 - 198
Target Start/End: Complemental strand, 20851653 - 20851472
Alignment:
Q  16 tcactgctcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatct 115  Q
    |||||| ||||||||||||||||| ||||||  ||| |||||| | |  | |||||| ||||||||| ||||| |   ||||||||||||||  ||||||    
T  20851653 tcactgttcgcttaagcgaacgggtaaaatcacatt-ctgggtagttcacgtgaatgttcgcttaagcgacggatgcttcgcttaagcgaccaatcatct 20851555  T
Q  116 gggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttc 198  Q
    ||||||||||||| | |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  20851554 gggcagggtaaaagc-tacgattttcagacttctcctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttc 20851472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 16 - 198
Target Start/End: Complemental strand, 20858280 - 20858099
Alignment:
Q  16 tcactgctcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatct 115  Q
    |||||| ||||||||||||||||| ||||||  ||| |||||| | |  | |||||| ||||||||| ||||| |   ||||||||||||||  ||||||    
T  20858280 tcactgttcgcttaagcgaacgggtaaaatcacatt-ctgggtagttcacgtgaatgttcgcttaagcgacggatgcttcgcttaagcgaccaatcatct 20858182  T
Q  116 gggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttc 198  Q
    ||||||||||||| | |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  20858181 gggcagggtaaaagc-tacgattttcagacttctcctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttc 20858099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 72 - 198
Target Start/End: Complemental strand, 20045416 - 20045290
Alignment:
Q  72 gctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaacccaattt 170  Q
    ||||||||||| ||||||||| |||||||||||||  ||||||||||||||||||||   |||||||| |||||||||| ||||||||||||||||||||    
T  20045416 gctcgcttaagcgacgggtagttcgcttaagcgactactcatctgggcagggtaaaagt-tacgattttcagacttctcatcactccaaaaacccaattt 20045318  T
Q  171 caatcccctgatcacccaaaatgttttc 198  Q
     |||||||||||||||||||| ||||||    
T  20045317 taatcccctgatcacccaaaacgttttc 20045290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 16 - 198
Target Start/End: Original strand, 21705810 - 21705991
Alignment:
Q  16 tcactgctcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatct 115  Q
    |||||| ||||||||||||||||| ||||||  ||| |||||| | |  | |||||| |||||||||  |||| |   ||||||||||||||  ||||||    
T  21705810 tcactgttcgcttaagcgaacgggtaaaatcacatt-ctgggtagttcacgtgaatgttcgcttaagcaacggatgcttcgcttaagcgaccaatcatct 21705908  T
Q  116 gggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttc 198  Q
    ||||||||||||| | |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  21705909 gggcagggtaaaagc-tacgattttcagacttctcctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttc 21705991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 16 - 198
Target Start/End: Original strand, 21710353 - 21710534
Alignment:
Q  16 tcactgctcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatct 115  Q
    |||||| ||||||||||||||||| ||||||  ||| |||||| | |  | |||||| |||||||||  |||| |   | ||||||||||||  ||||||    
T  21710353 tcactgttcgcttaagcgaacgggtaaaatcacatt-ctgggtagttcacgtgaatgttcgcttaagcaacggatgctttgcttaagcgaccaatcatct 21710451  T
Q  116 gggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttc 198  Q
    ||||||||| ||| | |||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||    
T  21710452 gggcagggtgaaagc-tacgattttcagacttctcctcactccaaaaacccaattttaattccctgatcacccaaaacgttttc 21710534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 465 - 551
Target Start/End: Original strand, 41112010 - 41112095
Alignment:
Q  465 atttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttg 551  Q
    ||||||||||||||| | | ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41112010 atttttcaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttg 41112095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 489 - 545
Target Start/End: Original strand, 32651571 - 32651627
Alignment:
Q  489 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 545  Q
    ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||    
T  32651571 tcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 32651627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 489 - 545
Target Start/End: Original strand, 18712798 - 18712854
Alignment:
Q  489 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 545  Q
    ||||||||||| ||||||| | ||||||||||||||||||||||||||| |||||||    
T  18712798 tcaattttcagaaattatatactatgattattgagagatagtctcacccatacctta 18712854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 490 - 545
Target Start/End: Complemental strand, 19663572 - 19663517
Alignment:
Q  490 caattttcaggaattatagattatgattattgagagatagtctcacccttacctta 545  Q
    |||||||||| ||||||| | ||||||||| |||||||||||||||||||||||||    
T  19663572 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 19663517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 191
Target Start/End: Complemental strand, 22030234 - 22030094
Alignment:
Q  51 ttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaac-ctacgatttcagacttctc 149  Q
    |||| ||| ||||||||||||||||||||||| ||| |||   ||||||||||||||  |||||||||||| | |||||| ||  | ||||| ||   |     
T  22030234 ttctaggttgcttgcttgaatgctcgcttaagcgactggtctttcgcttaagcgaccattcatctgggcagtgcaaaaactctcgggtttcaaacccttt 22030135  T
Q  150 ctcactccaaaaacccaatttcaatcccctgatcacccaaaa 191  Q
     ||| ||| |||||||||||| ||||||||||||||||||||    
T  22030134 ttcattcc-aaaacccaattttaatcccctgatcacccaaaa 22030094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 150 - 254
Target Start/End: Original strand, 11157760 - 11157863
Alignment:
Q  150 ctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaa 249  Q
    |||||||||||| | |||||| |||||||||||||| |  ||||| | | ||||||||||||||||| |   | |||| ||| |||||||||||||||||    
T  11157760 ctcactccaaaa-ctcaattttaatcccctgatcactcggaatgtgtcccaacagatgtttacaggttcagaacacaactaggcatctaaaggaacacaa 11157858  T
Q  250 aacag 254  Q
    |||||    
T  11157859 aacag 11157863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 489 - 545
Target Start/End: Original strand, 20805320 - 20805376
Alignment:
Q  489 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 545  Q
    ||||||||||| ||||||| |||||||| |||||||| ||| |||||||||||||||    
T  20805320 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 20805376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 490 - 545
Target Start/End: Original strand, 11158093 - 11158148
Alignment:
Q  490 caattttcaggaattatagattatgattattgagagatagtctcacccttacctta 545  Q
    |||||||||| ||||||| |||| ||| |||||||| |||||||||||||||||||    
T  11158093 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 11158148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 489 - 543
Target Start/End: Complemental strand, 10811839 - 10811785
Alignment:
Q  489 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacct 543  Q
    ||||||||||| |||| || | ||| |||||||||||||||||||||||||||||    
T  10811839 tcaattttcagaaattctacactattattattgagagatagtctcacccttacct 10811785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 546
Target Start/End: Complemental strand, 20851187 - 20851132
Alignment:
Q  491 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 546  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  20851187 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20851132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 546
Target Start/End: Complemental strand, 20857814 - 20857759
Alignment:
Q  491 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 546  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  20857814 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20857759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 546
Target Start/End: Original strand, 21706276 - 21706331
Alignment:
Q  491 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 546  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  21706276 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21706331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 546
Target Start/End: Original strand, 21710818 - 21710873
Alignment:
Q  491 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 546  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  21710818 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21710873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 515 - 545
Target Start/End: Original strand, 24476350 - 24476380
Alignment:
Q  515 attattgagagatagtctcacccttacctta 545  Q
    |||||||||||||||||||||||||||||||    
T  24476350 attattgagagatagtctcacccttacctta 24476380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 515 - 545
Target Start/End: Complemental strand, 25091448 - 25091418
Alignment:
Q  515 attattgagagatagtctcacccttacctta 545  Q
    |||||||||||||||||||||||||||||||    
T  25091448 attattgagagatagtctcacccttacctta 25091418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 511 - 544
Target Start/End: Original strand, 18271338 - 18271371
Alignment:
Q  511 tatgattattgagagatagtctcacccttacctt 544  Q
    ||||||||||||||| ||||||||||||||||||    
T  18271338 tatgattattgagagttagtctcacccttacctt 18271371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 511 - 544
Target Start/End: Original strand, 18275992 - 18276025
Alignment:
Q  511 tatgattattgagagatagtctcacccttacctt 544  Q
    ||||||||||||||| ||||||||||||||||||    
T  18275992 tatgattattgagagttagtctcacccttacctt 18276025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 221 - 273
Target Start/End: Original strand, 32651310 - 32651361
Alignment:
Q  221 tatacaattagacatctaaaggaacacaaaacagtcatccaccaacaacaatt 273  Q
    ||||||||||| |||||||||||||| ||||||| ||| || |||||||||||    
T  32651310 tatacaattaggcatctaaaggaacataaaacaggcat-caacaacaacaatt 32651361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 109; Significance: 1e-54; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 61 - 273
Target Start/End: Complemental strand, 102405 - 102194
Alignment:
Q  61 cttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaaa 160  Q
    ||||||||| |||||||||||| ||||||| | ||||||||||||||  |||||||||||| | |||||||||||  |||| || ||| |||||||||||    
T  102405 cttgcttgagtgctcgcttaagcgacgggtcgttcgcttaagcgaccattcatctgggcagtgcaaaaacctacgggttcaaacctcttctcactccaaa 102306  T
Q  161 aacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaaaacagtcatcc 260  Q
    |||||||||| ||||||||||||||||| || |||||| ||||||||||||||||| | ||| |||| ||| |||||||||||||||||||||| ||| |    
T  102305 aacccaattttaatcccctgatcacccataacgttttccaacagatgtttacaggttcaatacacaactaggcatctaaaggaacacaaaacaggcat-c 102207  T
Q  261 accaacaacaatt 273  Q
    | |||||||||||    
T  102206 aacaacaacaatt 102194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 489 - 545
Target Start/End: Complemental strand, 101984 - 101928
Alignment:
Q  489 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 545  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  101984 tcaattttcaggaattatatactatgattattgagagatagtctcacccttacctta 101928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 106; Significance: 9e-53; HSPs: 4)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 341 - 551
Target Start/End: Complemental strand, 2095 - 1892
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatca 440  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||| |||| ||||| |||||||| ||||||||||||||  | ||| |||| ||||||    
T  2095 tatgatcacagcaacaacaaggattaagttttcattatgaacattaaattacaagagaattaacataatcattacccattc--catcaaaatcatcatca 1998  T
Q  441 aaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaa-ttttcaggaattatagattatgattattgagagatagtctcaccctt 539  Q
    ||||||||||||||| ||      ||||| ||||||||| | | |||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||    
T  1997 aaccctaaccctcaaatt------attttccaaaactatacaattaggtcaatttttcagaaattatagattatgattattgagatatagtctcaccctt 1904  T
Q  540 accttagttttg 551  Q
    ||||||||||||    
T  1903 accttagttttg 1892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 341 - 551
Target Start/End: Complemental strand, 8772 - 8569
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatca 440  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||| |||| ||||| |||||||| ||||||||||||||  | ||| |||| ||||||    
T  8772 tatgatcacagcaacaacaaggattaagttttcattttgaacattaaattacaagagaattaacataatcattacccattc--catcataatcatcatca 8675  T
Q  441 aaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaa-ttttcaggaattatagattatgattattgagagatagtctcaccctt 539  Q
    ||||||||||||||| ||      ||||| ||||||||| | | |||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||    
T  8674 aaccctaaccctcaaatt------attttccaaaactatacaattaggtcaatttttcagaaattatagattatgattattgagatatagtctcaccctt 8581  T
Q  540 accttagttttg 551  Q
    ||||||||||||    
T  8580 accttagttttg 8569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 25 - 227
Target Start/End: Complemental strand, 9087 - 8886
Alignment:
Q  25 gcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaag-ggacgggtagctcgcttaagcgaccgctcatctgggcaggg 123  Q
    ||||||||||||||| ||||||| | |||||||    || |||||||||||||||||| | | ||||   |||||||||| |||  |||||||||||| |    
T  9087 gcttaagcgaacgggtaaaatcgca-ttctgggcaatttccttgaatgctcgcttaagcgaatgggtgcttcgcttaagcaaccaatcatctgggcagtg 8989  T
Q  124 taaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatat 223  Q
      |||||||||| |||||||| ||| |||||||||||||| |||||| |||||||  |||||||||||||||||| | || |||||||||||||||||||    
T  8988 -caaaacctacggtttcagacctcttctcactccaaaaactcaattttaatcccccaatcacccaaaatgttttccagcatatgtttacaggtcctatat 8890  T
Q  224 acaa 227  Q
    ||||    
T  8889 acaa 8886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 2310 - 2209
Alignment:
Q  126 aaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatac 225  Q
    |||||||||| |||||||| ||| |||||||||||||| |||||| |||||||  |||||||||||||||||| | ||||||||||||||||||||||||    
T  2310 aaaacctacggtttcagacctcttctcactccaaaaactcaattttaatcccccaatcacccaaaatgttttccagcagatgtttacaggtcctatatac 2211  T
Q  226 aa 227  Q
    ||    
T  2210 aa 2209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 72 - 251
Target Start/End: Original strand, 72873 - 73052
Alignment:
Q  72 gctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttc 171  Q
    ||||||||||| || |||   ||||||||||||||| |||||| |||||||  |||||||||| |||||||||||||||||||||||||||||||||||     
T  72873 gctcgcttaagcgatgggattctcgcttaagcgaccactcatccgggcaggacaaaaacctactatttcagacttctcctcactccaaaaacccaatttt 72972  T
Q  172 aatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaaaa 251  Q
    |||||||||||||||||||| |||||| | ||  ||||||||||||||||| |||| |||||||| ||||||||||||||    
T  72973 aatcccctgatcacccaaaacgttttccagcaattgtttacaggtcctatacacaactagacatcgaaaggaacacaaaa 73052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 1e-51; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 341 - 555
Target Start/End: Original strand, 6483575 - 6483782
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatca 440  Q
    |||||||||| |||||  | |||||||||||||||||| |||||||  ||| || || ||||||||||||| |||||||||| || || |||| ||||||    
T  6483575 tatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattcccct-caaaatcatcatca 6483673  T
Q  441 aaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcaccctta 540  Q
    |||||||||||||||||||||||       ||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  6483674 aaccctaaccctcaatttattttc------caaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccctta 6483767  T
Q  541 ccttagttttgatga 555  Q
    ||||| ||| |||||    
T  6483768 ccttaatttagatga 6483782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 341 - 555
Target Start/End: Original strand, 6487042 - 6487249
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatca 440  Q
    |||||||||| |||||  | |||||||||||||||||| |||||||  ||| || || ||||||||||||| |||||||||| || || |||| ||||||    
T  6487042 tatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattcccct-caaaatcatcatca 6487140  T
Q  441 aaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcaccctta 540  Q
    |||||||||||||||||||||||       ||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  6487141 aaccctaaccctcaatttattttc------caaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccctta 6487234  T
Q  541 ccttagttttgatga 555  Q
    ||||| ||| |||||    
T  6487235 ccttaatttagatga 6487249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 72 - 251
Target Start/End: Complemental strand, 27208186 - 27208007
Alignment:
Q  72 gctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttc 171  Q
    ||||||||||| || |||  | |||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||     
T  27208186 gctcgcttaagcgatgggatgttcgcttaagcgaccactcatctgggcaaggtaaaaacttacgatttcagacttctcctcactccaaaaacccaatttt 27208087  T
Q  172 aatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaaaa 251  Q
    |||||||||||||||||||| |||||| | ||  ||||||||||| ||||| |||| ||| |||| ||||||||||||||    
T  27208086 aatcccctgatcacccaaaacgttttccagcaattgtttacaggttctatacacaactaggcatcgaaaggaacacaaaa 27208007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 341 - 545
Target Start/End: Complemental strand, 19661651 - 19661454
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatca 440  Q
    |||||||||| |||||| | |||||||||||||||||| ||||||| |||| || || ||||||||||||| |||||||||| | |||||||| ||||||    
T  19661651 tatgatcacaacaacaatatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcc-cctcagaatcatcatca 19661553  T
Q  441 aaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcaccctta 540  Q
    ||||||||||||||||||      || || ||||||||||| | ||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||    
T  19661552 aaccctaaccctcaattt------atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagaaagtctcaccctta 19661459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 72 - 248
Target Start/End: Complemental strand, 27210521 - 27210345
Alignment:
Q  72 gctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttc 171  Q
    ||||||||||| || |||  | |||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||     
T  27210521 gctcgcttaagcgatgggatgttcgcttaagcgaccactcatctgggcaaggtaaaaacttacgatttcagacttctcctcactccaaaaacccaatttt 27210422  T
Q  172 aatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacaca 248  Q
    |||||||||||||||||||| |||||| | ||  ||||||||||| ||||| |||| ||| |||| |||||||||||    
T  27210421 aatcccctgatcacccaaaacgttttccagcaattgtttacaggttctatacacaactaggcatcgaaaggaacaca 27210345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 54 - 273
Target Start/End: Original strand, 23063256 - 23063474
Alignment:
Q  54 tgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctac-gatttcagacttctcctc 152  Q
    ||||| ||||||||||||||||||||||| ||||||| | ||||||||||||||  |||||||||||| | |||||||||| | ||||| || | | |||    
T  23063256 tgggtagcttgcttgaatgctcgcttaagcgacgggtcgttcgcttaagcgaccattcatctgggcagtgcaaaaacctacgggtttcaaaccttttctc 23063355  T
Q  153 actccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaaaac 252  Q
    ||||| |||||||||||| ||||||||||||||||||||   |||| ||||||||||||||||| | |||   || ||| ||||||||||||||||||||    
T  23063356 actcc-aaaacccaattttaatcccctgatcacccaaaacaatttccaacagatgtttacaggttcaatacttaactaggcatctaaaggaacacaaaac 23063454  T
Q  253 agtcatccaccaacaacaatt 273  Q
    || ||| || |||||||||||    
T  23063455 aggcat-caacaacaacaatt 23063474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 72 - 250
Target Start/End: Original strand, 26884797 - 26884974
Alignment:
Q  72 gctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttc 171  Q
    ||||||||||| || |||  | |||||||||||| | |||||||||||||| | ||||| |||||||||||||||||| |||||||||||| |||||||     
T  26884797 gctcgcttaagcgatgggatgttcgcttaagcgatcactcatctgggcaggatgaaaacttacgatttcagacttctcttcactccaaaaatccaatttt 26884896  T
Q  172 aatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaaa 250  Q
    |||||||||||||||||||| |||||| | || |||||||||||||||||| |||| ||| || | |||||||||||||    
T  26884897 aatcccctgatcacccaaaacgttttccagca-atgtttacaggtcctatacacaactaggcaccgaaaggaacacaaa 26884974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 72 - 251
Target Start/End: Complemental strand, 23168768 - 23168589
Alignment:
Q  72 gctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaacccaattt 170  Q
    ||||||||||| || |||  | |||||||||||||| ||||||||||||||||| |||| |||||||| |||||||||| ||||||||||| ||||||||    
T  23168768 gctcgcttaagtgatgggatgttcgcttaagcgaccactcatctgggcagggtagaaacttacgattttcagacttctcatcactccaaaatcccaattt 23168669  T
Q  171 caatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaaaa 251  Q
     |||||||||||||||||||| |||||| | || ||||||||| |||||||| |||| ||| || | ||||||||||||||    
T  23168668 taatcccctgatcacccaaaacgttttccagca-atgtttacaagtcctatacacaactaggcaccgaaaggaacacaaaa 23168589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 72 - 251
Target Start/End: Complemental strand, 23580025 - 23579846
Alignment:
Q  72 gctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaacccaattt 170  Q
    ||||||||||| || |||  | |||||||||||||| ||||||||||||||||| |||| |||||||| |||||||||| ||||||||||| ||||||||    
T  23580025 gctcgcttaagtgatgggatgttcgcttaagcgaccactcatctgggcagggtagaaacttacgattttcagacttctcatcactccaaaatcccaattt 23579926  T
Q  171 caatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaaaa 251  Q
     |||||||||||||||||||| |||||| | || ||||||||| |||||||| |||| ||| || | ||||||||||||||    
T  23579925 taatcccctgatcacccaaaacgttttccagca-atgtttacaagtcctatacacaactaggcaccgaaaggaacacaaaa 23579846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 10 - 244
Target Start/End: Complemental strand, 23101988 - 23101755
Alignment:
Q  10 gctcgttcactgctcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgc 109  Q
    ||||| |||| | ||||||||||||||||||||||||| ||| |||||  |||| ||||||| |||||||||| ||||| | | ||||||||||||||      
T  23101988 gctcgctcacggttcgcttaagcgaacgggcaaaatcgcatt-ctgggcagcttccttgaattctcgcttaagcgacggctggttcgcttaagcgaccat 23101890  T
Q  110 tcatctgggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgt 208  Q
    |||||||||||| | | ||||||||| ||| ||  | ||| | ||||| |||| |||||||| |||||||||||||||||||| |||||| | |||||||    
T  23101889 tcatctgggcagtgcagaaacctacggttttcaaccctcttcacactctaaaa-cccaattttaatcccctgatcacccaaaacgttttccatcagatgt 23101791  T
Q  209 ttacaggtcctatatacaattagacatctaaaggaa 244  Q
    |||||||| ||||| |||| ||| ||||||||||||    
T  23101790 ttacaggttctatacacaactaggcatctaaaggaa 23101755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 343 - 551
Target Start/End: Original strand, 26583687 - 26583887
Alignment:
Q  343 tgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaa 442  Q
    ||||||||||||||  | |||||| |  |||||||||||||| |  ||| || |   |||||||||||||||||| |||| || ||||||| |||||||     
T  26583687 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattaccctttcccct-cagaatcatcatcaag 26583785  T
Q  443 ccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttacc 542  Q
    |||||||||||||||||||||       ||||||||||| | ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  26583786 ccctaaccctcaatttattttc------caaaactatgcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttacc 26583878  T
Q  543 ttagttttg 551  Q
    |||||||||    
T  26583879 ttagttttg 26583887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 23 - 227
Target Start/End: Complemental strand, 5706536 - 5706334
Alignment:
Q  23 tcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagg 122  Q
    ||||||||||||||||| ||||||| ||| |||||  ||||||||||||||||||||||| ||||| |   ||||||||||||||  || ||||| |||     
T  5706536 tcgcttaagcgaacgggtaaaatcgcatt-ctgggcagcttgcttgaatgctcgcttaagcgacggatgcttcgcttaagcgaccattcgtctggacagt 5706438  T
Q  123 gtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctata 222  Q
    | |||| |||||| ||||||||  || |||||||||||||| | |||| ||||||||||| ||||||||| | ||| ||||||||||||||||||| |||    
T  5706437 gcaaaa-cctacggtttcagaccacttctcactccaaaaactccattttaatcccctgattacccaaaatatattccaacagatgtttacaggtccaata 5706339  T
Q  223 tacaa 227  Q
    |||||    
T  5706338 tacaa 5706334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 16 - 198
Target Start/End: Original strand, 10111 - 10292
Alignment:
Q  16 tcactgctcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatct 115  Q
    |||||| ||||||||||||||||| ||||||  ||| |||||| | |  | |||||| ||||||||| ||||| |   ||||||||||||||  ||||||    
T  10111 tcactgttcgcttaagcgaacgggtaaaatcacatt-ctgggtagttcacgtgaatgttcgcttaagcgacggatgcttcgcttaagcgaccaatcatct 10209  T
Q  116 gggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttc 198  Q
    ||||||||||||| | |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  10210 gggcagggtaaaagc-tacgattttcagacttctcctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttc 10292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 49 - 251
Target Start/End: Original strand, 23264709 - 23264910
Alignment:
Q  49 atttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgatttcagacttct 148  Q
    |||||||||| |||  | ||| || ||||||||| ||||||| | ||||||||| ||||  |||||||| |   | |||||||||||  |||||||   |    
T  23264709 atttctgggttgctaacatgagtgttcgcttaagcgacgggtcgttcgcttaagtgaccattcatctggactttgcaaaaacctacgggttcagaccctt 23264808  T
Q  149 cctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacaca 248  Q
     |||||||||||| |||||||| ||||||||||||||||||||||||||| |||||| |||||||||||| ||| |||| ||| ||||||||||||||||    
T  23264809 tctcactccaaaa-cccaattttaatcccctgatcacccaaaatgttttccaacagaagtttacaggtccaatacacaactaggcatctaaaggaacaca 23264907  T
Q  249 aaa 251  Q
    |||    
T  23264908 aaa 23264910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 65 - 253
Target Start/End: Original strand, 24661159 - 24661346
Alignment:
Q  65 cttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacga-tttcagacttctcctcactccaaaaac 163  Q
    |||||||||||||||||| ||||||| | ||||||||||||||  |||| ||||||| | |||||| ||||  ||||| |||  | |||| ||||||| |    
T  24661159 cttgaatgctcgcttaagcgacgggtcgttcgcttaagcgaccattcatttgggcagtgcaaaaacttacgggtttca-actctttctcattccaaaa-c 24661256  T
Q  164 ccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaaaaca 253  Q
    ||||||| ||||||||||||| |||||| |||||  ||||||||||||||||| | |||||||| |||  ||||||||||||| ||||||    
T  24661257 ccaattttaatcccctgatcaaccaaaacgtttttcaacagatgtttacaggttcaatatacaactaggtatctaaaggaacataaaaca 24661346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 94 - 198
Target Start/End: Complemental strand, 25181364 - 25181260
Alignment:
Q  94 tcgcttaagcgaccgctcatctgggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaat 192  Q
    ||||||||||||||  ||||||||||||||||||| | |||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||     
T  25181364 tcgcttaagcgaccaatcatctgggcagggtaaaagc-tacgattttcagacttctcctcacttcaaaaacccaattttaatcccctgatcacccaaaac 25181266  T
Q  193 gttttc 198  Q
    ||||||    
T  25181265 gttttc 25181260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 49 - 251
Target Start/End: Original strand, 21907923 - 21908125
Alignment:
Q  49 atttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacga-tttcagacttc 147  Q
    |||||||||| |||  | ||| || ||||||||| ||||||| | | ||||| ||||||  |||||||| | | | |||||||||||  ||||| ||       
T  21907923 atttctgggttgctaacatgagtgttcgcttaagcgacgggtcgtttgcttaggcgaccattcatctggactgtgcaaaaacctacgggtttcaaaccct 21908022  T
Q  148 tcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacac 247  Q
    | |||||||||||| |||||||| ||||||||||||||||| ||||||| ||||||||||||||||| ||| ||| |||| ||| |||||||||||||||    
T  21908023 ttctcactccaaaa-cccaattttaatcccctgatcacccagaatgtttcctaacagatgtttacagttccaatacacaactaggcatctaaaggaacac 21908121  T
Q  248 aaaa 251  Q
    ||||    
T  21908122 aaaa 21908125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 92 - 244
Target Start/End: Original strand, 26583438 - 26583590
Alignment:
Q  92 gctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaa 190  Q
    |||||||||||||||   |||||||||||| | ||||||||||| ||| ||  | ||| | |||||||||| |||||||| |||||||||||||||||||    
T  26583438 gctcgcttaagcgactattcatctgggcagtgcaaaaacctacggttttcaaccctcttcacactccaaaa-cccaattttaatcccctgatcacccaaa 26583536  T
Q  191 atgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaa 244  Q
    | |||||| | ||||||||||||||| ||||| |||| ||| ||||||||||||    
T  26583537 acgttttccagcagatgtttacaggttctatacacaactaggcatctaaaggaa 26583590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 341 - 458
Target Start/End: Complemental strand, 23089253 - 23089137
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatca 440  Q
    ||||||||||||||||  | |||||||| |||||||| |||| | | |||| || |  |||||||||||||||||||||||| ||| |||||| ||||||    
T  23089253 tatgatcacagcaacagtatagattaagatttcattccgaacgtcacattacaacataattaacatgatcattacccattcccctt-agaatcatcatca 23089155  T
Q  441 aaccctaaccctcaattt 458  Q
    ||||||||||||||||||    
T  23089154 aaccctaaccctcaattt 23089137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 159 - 244
Target Start/End: Complemental strand, 23089432 - 23089347
Alignment:
Q  159 aaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaa 244  Q
    |||||||||||| |||||||||||||||||||| |||||| | ||||||||||||||| ||||| |||| ||| ||||||||||||    
T  23089432 aaaacccaattttaatcccctgatcacccaaaacgttttccagcagatgtttacaggttctatacacaactagtcatctaaaggaa 23089347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 472 - 546
Target Start/End: Complemental strand, 5706096 - 5706023
Alignment:
Q  472 aaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 546  Q
    |||||||| | | ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  5706096 aaaactattcaattaggtcaattt-caggaattatagattatgattaatgagagatagtctcacccttaccttag 5706023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 341 - 458
Target Start/End: Complemental strand, 23101661 - 23101545
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatca 440  Q
    |||||||||| |||||  | |||||||| |||||||| |||| | | |||| || |  |||||||||||||||||||||||| || ||||||| ||||||    
T  23101661 tatgatcacaacaacagtatagattaagatttcattccgaacgtcacattacaacataattaacatgatcattacccattcccct-cagaatcatcatca 23101563  T
Q  441 aaccctaaccctcaattt 458  Q
    ||||||||||||||||||    
T  23101562 aaccctaaccctcaattt 23101545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 489 - 545
Target Start/End: Original strand, 21908358 - 21908414
Alignment:
Q  489 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 545  Q
    ||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||    
T  21908358 tcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 21908414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 489 - 545
Target Start/End: Original strand, 23265141 - 23265197
Alignment:
Q  489 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 545  Q
    ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||    
T  23265141 tcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23265197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 489 - 545
Target Start/End: Original strand, 23280209 - 23280265
Alignment:
Q  489 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 545  Q
    ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||    
T  23280209 tcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23280265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 459
Target Start/End: Original strand, 23878865 - 23878982
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcatta-cccattcctcttcagaatcgtcatc 439  Q
    |||||||||| |||||  | |||||||| ||||||||||||||| | |||| || |  |||||||||||||||| |||||||| | |||||||| ||| |    
T  23878865 tatgatcacaacaacagtatagattaagatttcattctgaacatcacattacaacataattaacatgatcattaccccattcc-cctcagaatcatcaac 23878963  T
Q  440 aaaccctaaccctcaattta 459  Q
     |||||||||||||||||||    
T  23878964 -aaccctaaccctcaattta 23878982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 26583383 - 26583448
Alignment:
Q  16 tcactgctcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaag 82  Q
    |||||| ||||||||||||||||| ||||||| | ||||| |  |||||||||||||||||||||||    
T  26583383 tcactgttcgcttaagcgaacgggtaaaatcgca-ttctgagcagcttgcttgaatgctcgcttaag 26583448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 159 - 244
Target Start/End: Original strand, 23878686 - 23878771
Alignment:
Q  159 aaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaa 244  Q
    |||||||||||| |||||| |||||  |||||| |||| | | ||||||||||||||| ||||| | || ||| ||||||||||||    
T  23878686 aaaacccaattttaatcccttgatcgtccaaaacgtttcccagcagatgtttacaggttctatacaaaactaggcatctaaaggaa 23878771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 102
Target Start/End: Complemental strand, 23089560 - 23089470
Alignment:
Q  10 gctcgttcactgctcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaag 102  Q
    ||||| |||| | ||||||||||||||||||||| ||| ||| |||||  ||||||| ||||||||||||||| ||||| | | |||||||||    
T  23089560 gctcgctcacggttcgcttaagcgaacgggcaaa-tcgcatt-ctgggcagcttgctagaatgctcgcttaagcgacggctggttcgcttaag 23089470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 489 - 545
Target Start/End: Original strand, 24661576 - 24661632
Alignment:
Q  489 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 545  Q
    ||||||||||| ||||||| |||||||| || ||||| ||| |||||||||||||||    
T  24661576 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta 24661632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 546
Target Start/End: Original strand, 10577 - 10632
Alignment:
Q  491 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 546  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  10577 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 10632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 546
Target Start/End: Complemental strand, 25180984 - 25180929
Alignment:
Q  491 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 546  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  25180984 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 25180929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 485 - 543
Target Start/End: Original strand, 23879002 - 23879060
Alignment:
Q  485 taggtcaattttcaggaattatagattatgattattgagagatagtctcacccttacct 543  Q
    ||||||||||||  | ||||||| || || |||| ||||||||||||||||||||||||    
T  23879002 taggtcaatttttcgaaattatatataattattaatgagagatagtctcacccttacct 23879060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 485 - 545
Target Start/End: Complemental strand, 23101524 - 23101463
Alignment:
Q  485 taggtcaattttcaggaattatagattatg-attattgagagatagtctcacccttacctta 545  Q
    ||||||||||||| | ||||| | |||||  |||| ||||||||||||||||||||||||||    
T  23101524 taggtcaattttccgaaattacatattatctattaatgagagatagtctcacccttacctta 23101463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 221 - 253
Target Start/End: Original strand, 6483457 - 6483489
Alignment:
Q  221 tatacaattagacatctaaaggaacacaaaaca 253  Q
    |||||||||||||||||||||||||| ||||||    
T  6483457 tatacaattagacatctaaaggaacataaaaca 6483489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 221 - 253
Target Start/End: Original strand, 6486924 - 6486956
Alignment:
Q  221 tatacaattagacatctaaaggaacacaaaaca 253  Q
    |||||||||||||||||||||||||| ||||||    
T  6486924 tatacaattagacatctaaaggaacataaaaca 6486956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 474 - 546
Target Start/End: Original strand, 26885166 - 26885237
Alignment:
Q  474 aactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 546  Q
    |||||| ||| ||| | ||||||||| ||||||| |||| ||||||||| ||||| || ||||||||||||||    
T  26885166 aactattccattagattaattttcagaaattatacatta-gattattgaaagataatcccacccttaccttag 26885237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 100; Significance: 3e-49; HSPs: 2)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 64 - 251
Target Start/End: Original strand, 17750 - 17936
Alignment:
Q  64 gcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaaaaac 163  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||  |||||||||||||  |||||| ||||  ||||||| ||||||| ||||||||||    
T  17750 gcttgaatgcttgcttaagcgacgggtagctcgcttaagcgaccattcatctgggcaggc-aaaaacttacgggttcagacctctcctccctccaaaaac 17848  T
Q  164 ccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaaaa 251  Q
    |||| || |||||| ||||||||||||| |||||| ||||||||||||||||| ||||| |||||||| | ||||||||||| |||||    
T  17849 ccaactttaatcccgtgatcacccaaaacgttttccaacagatgtttacaggttctatacacaattaggcctctaaaggaacgcaaaa 17936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 342 - 551
Target Start/End: Original strand, 18026 - 18230
Alignment:
Q  342 atgatcacagcaacaacaaagattaagttttcattctgaacattatattataag-aggattaacatgatcattacccattcctcttcagaatcgtcatca 440  Q
    |||||||||||||||||| || |||||||||||||||| |||| | |||| ||  || |||||||||| |||||||  ||||  || |||||| |||| |    
T  18026 atgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacagaattaacatgaccattaccatttcccgtt-agaatcatcatta 18124  T
Q  441 aaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcaccctta 540  Q
    |||| ||||||||||||||||||  |     ||| ||| || | ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  18125 aaccttaaccctcaatttattttcct-----aaagctaagcaattaggtcaattttcaaaaattatagattatgattattgagagatagtctcaccctta 18219  T
Q  541 ccttagttttg 551  Q
    |||||||||||    
T  18220 ccttagttttg 18230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 100; Significance: 3e-49; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 341 - 551
Target Start/End: Original strand, 149 - 351
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatca 440  Q
    |||||||||| ||| |||| ||||||||| |||| ||||||||  ||| || ||||  |||||||||||||||||||||||| | |||||||| ||||||    
T  149 tatgatcacatcaataacatagattaagtcttcaatctgaacaccataatacaagaaaattaacatgatcattacccattcc-cctcagaatcatcatca 247  T
Q  441 aaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcaccctta 540  Q
    ||||||||||||||||||      ||||| ||||||||||| | |||||||| |||||| |||||||||||||| |||||||||||||||||||||||||    
T  248 aaccctaaccctcaattt------attttccaaaactatgcaattaggtcaa-tttcagaaattatagattatggttattgagagatagtctcaccctta 340  T
Q  541 ccttagttttg 551  Q
    |||||||||||    
T  341 ccttagttttg 351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 202 - 253
Target Start/End: Original strand, 11 - 62
Alignment:
Q  202 cagatgtttacaggtcctatatacaattagacatctaaaggaacacaaaaca 253  Q
    |||||||||||||||||||||||||| ||  ||||||| | |||||||||||    
T  11 cagatgtttacaggtcctatatacaactaagcatctaaggaaacacaaaaca 62  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 98; Significance: 5e-48; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 10 - 246
Target Start/End: Complemental strand, 80017 - 79783
Alignment:
Q  10 gctcgttcactgctcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgc 109  Q
    ||||| |||||| ||||||||||||||||| ||||||  ||| |||||  |||  | |||||| ||||||||| |||||||   |||||||||||||| |    
T  80017 gctcgctcactgttcgcttaagcgaacgggtaaaatctaattcctgggcagcta-catgaatgttcgcttaagcgacgggtgcttcgcttaagcgaccac 79919  T
Q  110 tcatctgggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgt 208  Q
    |||||||||||||||||||   |||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||  | | ||||    
T  79918 tcatctgggcagggtaaaagt-tacgattttcagacttctcctcactccaaaaacccagttttaatcccctgatcacccaaaacgttttc-cagaaatgt 79821  T
Q  209 ttacaggtcctatatacaattagacatctaaaggaaca 246  Q
    ||||| |||||||||||||| ||||||| |||||||||    
T  79820 ttacaagtcctatatacaatcagacatcaaaaggaaca 79783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 51 - 273
Target Start/End: Complemental strand, 81701 - 81480
Alignment:
Q  51 ttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacga-tttcagacttctc 149  Q
    |||||||| |||| |||||||||||||||||| ||||||| | ||||||| ||||||  |||| ||||||| | |||||| ||||  |||||  |   |     
T  81701 ttctgggttgcttacttgaatgctcgcttaagcgacgggttgttcgcttatgcgaccattcatttgggcagtgcaaaaacttacgggtttcaaccccttt 81602  T
Q  150 ctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaa 249  Q
    |||| ||||||| |||||||| |||||||||||||||||||| |||||| ||||||||||||||||| |  || |||| ||| |||||||||||||| ||    
T  81601 ctcattccaaaa-cccaattttaatcccctgatcacccaaaacgttttccaacagatgtttacaggttcagtacacaactaggcatctaaaggaacataa 81503  T
Q  250 aacagtcatccaccaacaacaatt 273  Q
    ||||| ||| || |||||||||||    
T  81502 aacaggcat-caacaacaacaatt 81480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 97; Significance: 2e-47; HSPs: 2)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 343 - 551
Target Start/End: Original strand, 11200 - 11402
Alignment:
Q  343 tgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaa 442  Q
    ||||||||||||||  |  ||||||| ||||||| ||||||| | |||| || || ||||||||||||||||| |||||| || ||||||| ||||||||    
T  11200 tgatcacagcaacagtatggattaagatttcattttgaacatcacattacaacagaattaacatgatcattactcattcc-ctccagaatcatcatcaaa 11298  T
Q  443 ccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttacc 542  Q
    |||||||||||||||       ||||| |||||||| || | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11299 ccctaaccctcaattct-----attttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 11393  T
Q  543 ttagttttg 551  Q
    |||||||||    
T  11394 ttagttttg 11402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 159 - 244
Target Start/End: Original strand, 11019 - 11104
Alignment:
Q  159 aaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaa 244  Q
    |||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||| | |||||||| ||| ||||||||||||    
T  11019 aaaacccaattttaatcccctgatcacccaaaacgttttccaacagatgtttacaggttccatatacaactaggcatctaaaggaa 11104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1469 (Bit Score: 96; Significance: 8e-47; HSPs: 1)
Name: scaffold1469
Description:

Target: scaffold1469; HSP #1
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 94 - 273
Target Start/End: Original strand, 968 - 1146
Alignment:
Q  94 tcgcttaagcgaccgctcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatg 193  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||      
T  968 tcgcttaagcgactactcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaaaaacccaattttaatcccctgatcacccaaaaca 1067  T
Q  194 ttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaaaacagtcatccaccaacaacaatt 273  Q
    ||||| | |   ||||||||||||||| | |||| ||| |||| || |||| ||||||||| ||| || |||||||||||    
T  1068 ttttccagcgattgtttacaggtcctaaacacaactaggcatcaaagggaatacaaaacagacat-caacaacaacaatt 1146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 96; Significance: 8e-47; HSPs: 2)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 93 - 244
Target Start/End: Original strand, 30465 - 30616
Alignment:
Q  93 ctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaat 192  Q
    ||||||||||||||| ||||||||||||||| |||||||||||  | ||||| ||| ||||||||||||||||||||| |||||||||||||||||||||    
T  30465 ctcgcttaagcgaccactcatctgggcagggcaaaaacctacgggtccagacctcttctcactccaaaaacccaattttaatcccctgatcacccaaaat 30564  T
Q  193 gttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaa 244  Q
    |||| | ||||||||||||||||| |||||| ||| ||| ||||||||||||    
T  30565 gtttcccaacagatgtttacaggttctatatgcaactaggcatctaaaggaa 30616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 471 - 551
Target Start/End: Original strand, 30838 - 30918
Alignment:
Q  471 caaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttg 551  Q
    ||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30838 caaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttg 30918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 96; Significance: 8e-47; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 51 - 273
Target Start/End: Complemental strand, 15485 - 15264
Alignment:
Q  51 ttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacga-tttcagacttctc 149  Q
    |||||||  ||| ||||||||||||||||||| ||||||| | ||||||||||||||  |||||||||||| | |||||||||||  ||||| || | |     
T  15485 ttctgggcagctagcttgaatgctcgcttaagcgacgggtcgttcgcttaagcgaccattcatctgggcagtgcaaaaacctacgggtttcaaacctttt 15386  T
Q  150 ctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaa 249  Q
    |||||||||||| |||||||| |||||||||||||||||||  |||||| ||||||||||||||||| | ||| |||| ||| |||||||||||||||||    
T  15385 ctcactccaaaa-cccaattttaatcccctgatcacccaaagcgttttccaacagatgtttacaggttcaatacacaactaggcatctaaaggaacacaa 15287  T
Q  250 aacagtcatccaccaacaacaatt 273  Q
    ||||| ||| || |||||||||||    
T  15286 aacaggcat-caacaacaacaatt 15264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 490 - 545
Target Start/End: Complemental strand, 15052 - 14997
Alignment:
Q  490 caattttcaggaattatagattatgattattgagagatagtctcacccttacctta 545  Q
    |||||||||| ||||||| |||| ||| |||||||| |||||||||||||||||||    
T  15052 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 14997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 341 - 546
Target Start/End: Complemental strand, 10394 - 10195
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatca 440  Q
    |||||||||| |||||  | |||||||||||||||||| ||||||| |||| || || ||||||||||||| |||||||||| | |||||||| ||||||    
T  10394 tatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcc-cctcagaatcatcatca 10296  T
Q  441 aaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcaccctta 540  Q
    ||||||||||| ||||||||      ||   |||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  10295 aaccctaacccacaatttat-----cttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtcccaccctta 10201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 341 - 546
Target Start/End: Complemental strand, 1724 - 1525
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatca 440  Q
    |||||||||| |||||  | |||||||||||||||||| ||||||| |||| || || ||||||||||||| |||||||||| | |||||||| ||||||    
T  1724 tatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcc-cctcagaatcatcatca 1626  T
Q  441 aaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcaccctta 540  Q
    ||||||||||| ||||||||      ||   |||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  1625 aaccctaacccacaatttat-----cttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtcccaccctta 1531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 88; Significance: 5e-42; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 72 - 251
Target Start/End: Complemental strand, 11016 - 10837
Alignment:
Q  72 gctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttc 171  Q
    ||||||||||| || |||  | |||||||||||| | |||||||||||| | ||||||| ||||||||||||||||||||||||||  |||||||||||     
T  11016 gctcgcttaagcgatgggatgttcgcttaagcgatcactcatctgggcaagataaaaacttacgatttcagacttctcctcactccttaaacccaatttt 10917  T
Q  172 aatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaaaa 251  Q
    |||||||||||||||||||| |||||| | ||  ||||||||||||||||| | || ||| |||| ||||||||||||||    
T  10916 aatcccctgatcacccaaaacgttttccagcaattgtttacaggtcctatacataactaggcatcgaaaggaacacaaaa 10837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 88; Significance: 5e-42; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 60 - 251
Target Start/End: Complemental strand, 24047 - 23857
Alignment:
Q  60 gcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaa 159  Q
    ||||||||||||||||||||||| ||||  |   ||||||||||||||  |||||||||||| | |||| |||||| ||||| || ||| ||||||||||    
T  24047 gcttgcttgaatgctcgcttaagcgacgtctgcttcgcttaagcgaccaatcatctgggcagtgcaaaa-cctacggtttcatacctcttctcactccaa 23949  T
Q  160 aaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaaaa 251  Q
    ||||||||||| ||||||||||||||||||||||||||| | ||  ||||||||||||||||| |||| ||| || | ||||||||||||||    
T  23948 aaacccaattttaatcccctgatcacccaaaatgttttccagcaattgtttacaggtcctatacacaactaggcaccgaaaggaacacaaaa 23857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 88; Significance: 5e-42; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 51 - 246
Target Start/End: Original strand, 1386 - 1580
Alignment:
Q  51 ttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgatttcagacttctcc 150  Q
    |||||||| ||||||||||||||||||||||| ||||||| | ||||||||||||||  |||||| ||||| | |||||| |||| ||||| ||   | |    
T  1386 ttctgggttgcttgcttgaatgctcgcttaagcgacgggtcgttcgcttaagcgaccattcatctaggcagtgcaaaaacttacggtttcaaaccctttc 1485  T
Q  151 tcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaaca 246  Q
    ||| | | |||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||| | |||||||| ||| ||||||||||||||    
T  1486 tcattac-aaaacccaattttaatcccctgatcacccaaaacgttttccaacagatgtttacaggttcaatatacaactaggcatctaaaggaaca 1580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 489 - 555
Target Start/End: Original strand, 12296 - 12362
Alignment:
Q  489 tcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgatga 555  Q
    ||||||||||| ||||||| |||||||| |||||||| ||| ||||||||||||||| ||| |||||    
T  12296 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttaccttaatttagatga 12362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 88; Significance: 5e-42; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 10 - 244
Target Start/End: Complemental strand, 4147 - 3914
Alignment:
Q  10 gctcgttcactgctcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgc 109  Q
    ||||| |||| | ||||||||||||||||||||||||| ||| |||||  ||||||||||||||||||||||| ||||  | | |||||| || ||||      
T  4147 gctcgctcacggttcgcttaagcgaacgggcaaaatcgcatt-ctgggcagcttgcttgaatgctcgcttaagcgacgactggttcgcttgagtgaccat 4049  T
Q  110 tcatctgggcagggtaaaaacctacgatttcagact-tctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgt 208  Q
    |||||||||||| | | ||||||||| |||   ||| ||| | |||||| ||||||||||||||||||||||||||||||||| |||||| | |||||||    
T  4048 tcatctgggcagtgcagaaacctacggttttcaactctcttcacactcc-aaaacccaatttcaatcccctgatcacccaaaacgttttccagcagatgt 3950  T
Q  209 ttacaggtcctatatacaattagacatctaaaggaa 244  Q
    |||||||| ||||| |||| ||| ||||||||||||    
T  3949 ttacaggttctatacacaactaggcatctaaaggaa 3914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 341 - 458
Target Start/End: Complemental strand, 3820 - 3704
Alignment:
Q  341 tatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatca 440  Q
    |||||||||| |||||  | |||||||| |||||||| |||||| | |||| || |  |||||||||||||||||||| ||| | |||||||| ||||||    
T  3820 tatgatcacaacaacagtatagattaagatttcattccgaacatcacattacaacataattaacatgatcattaccca-tccccctcagaatcatcatca 3722  T
Q  441 aaccctaaccctcaattt 458  Q
    ||||||||||||||||||    
T  3721 aaccctaaccctcaattt 3704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 87; Significance: 2e-41; HSPs: 2)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 51 - 253
Target Start/End: Complemental strand, 494 - 293
Alignment:
Q  51 ttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgatttcagacttctcc 150  Q
    |||||||  ||||||||||||||||||||||| ||||||| | |||||||||| |||  |||||||||||| | |||||||||||  ||||  | ||| |    
T  494 ttctgggcagcttgcttgaatgctcgcttaagcgacgggtcgttcgcttaagcaaccattcatctgggcagtgcaaaaacctacgggttcaaccctcttc 395  T
Q  151 tcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaaa 250  Q
    ||||||||||| |||||||| ||||||| ||| ||||||||  ||||| ||||||||||||||||| | ||| |||| ||| ||||||||||||||||||    
T  394 tcactccaaaa-cccaattttaatcccccgattacccaaaacattttccaacagatgtttacaggttcaatacacaactaggcatctaaaggaacacaaa 296  T
Q  251 aca 253  Q
    |||    
T  295 aca 293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 489 - 545
Target Start/End: Complemental strand, 64 - 8
Alignment:
Q  489 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 545  Q
    ||||||||||| ||||||  |||| ||||||||||||||||||||||||||||||||    
T  64 tcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 8  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 84; Significance: 1e-39; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 51 - 273
Target Start/End: Original strand, 16391 - 16609
Alignment:
Q  51 ttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgatttcagacttctcc 150  Q
    |||||||  ||||||||||||| ||||||||| ||||||| | ||||||  ||||||  |||||| ||||| | |||||||||||  |||| || ||| |    
T  16391 ttctgggcagcttgcttgaatgttcgcttaagcgacgggtcgttcgctt--gcgaccattcatctaggcagcgcaaaaacctacgggttcaaacctcttc 16488  T
Q  151 tcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaaa 250  Q
    ||||||||||| ||||||||  ||||||||||||||||||| |||||| ||||||||||||||||| | ||| |||| ||| ||||||||||||| ||||    
T  16489 tcactccaaaa-cccaattttgatcccctgatcacccaaaacgttttccaacagatgtttacaggttcaatacacaactaggcatctaaaggaacgcaaa 16587  T
Q  251 acagtcatccaccaacaacaatt 273  Q
    |||| ||| || |||||||||||    
T  16588 acaggcat-caacaacaacaatt 16609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 489 - 545
Target Start/End: Original strand, 16819 - 16875
Alignment:
Q  489 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 545  Q
    ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||    
T  16819 tcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 16875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 83; Significance: 5e-39; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 51 - 253
Target Start/End: Complemental strand, 34763 - 34562
Alignment:
Q  51 ttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgatttcagacttctcc 150  Q
    |||||||  |||||| ||||||||| |||||| ||||||| | ||||||||||||||  |||||||||||| | |||||||||||  ||||  | ||| |    
T  34763 ttctgggaagcttgcgtgaatgctcacttaagcgacgggtcgttcgcttaagcgaccattcatctgggcagtgcaaaaacctacgggttcaaccctcttc 34664  T
Q  151 tcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaaa 250  Q
    ||||||||||| | |||||| ||||||||||| |||||||| |||||| ||||||| ||||||||| | ||| |||| ||| ||||||||||||||||||    
T  34663 tcactccaaaa-ctcaattttaatcccctgattacccaaaacgttttccaacagatatttacaggttcaatacacaactaggcatctaaaggaacacaaa 34565  T
Q  251 aca 253  Q
    |||    
T  34564 aca 34562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 490 - 545
Target Start/End: Complemental strand, 34331 - 34276
Alignment:
Q  490 caattttcaggaattatagattatgattattgagagatagtctcacccttacctta 545  Q
    |||||||||| ||||||| | ||||||||| |||||||||||||||||||||||||    
T  34331 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 34276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 83; Significance: 5e-39; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 72 - 250
Target Start/End: Complemental strand, 493492 - 493315
Alignment:
Q  72 gctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttc 171  Q
    ||||||||||| || |||  | |||||||||||| | |||||||||||||| | ||||| ||||||||||||| |||| ||||||||||||||||||||     
T  493492 gctcgcttaagcgatgggatgttcgcttaagcgatcactcatctgggcaggatgaaaacttacgatttcagacatctcttcactccaaaaacccaatttt 493393  T
Q  172 aatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaaa 250  Q
    ||||||||| |||||||||| |||||| | || |||||||||||||||||| |||| ||| || | |||||||||||||    
T  493392 aatcccctggtcacccaaaacgttttccagca-atgtttacaggtcctatacacaactaggcaccgaaaggaacacaaa 493315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 51 - 194
Target Start/End: Original strand, 525332 - 525475
Alignment:
Q  51 ttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaac-ctacgatttcagacttctc 149  Q
    |||||||| ||||||||||||||||| | ||| || |||| | ||||||||||||||  |||||| ||||| | |||||| ||  | ||||| ||   |     
T  525332 ttctgggttgcttgcttgaatgctcgttcaagcgatgggtcgttcgcttaagcgaccattcatctcggcagtgcaaaaactctcaggtttcaaacccttt 525431  T
Q  150 ctcactccaaaaacccaatttcaatcccctgatcacccaaaatgt 194  Q
     ||||||| |||||||||||| |||||| ||||||||||||||||    
T  525432 atcactcc-aaaacccaattttaatcccttgatcacccaaaatgt 525475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 474 - 546
Target Start/End: Complemental strand, 493099 - 493028
Alignment:
Q  474 aactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 546  Q
    |||||| ||| ||| | ||||||||| ||||||| |||| ||||||||| ||||| |||||||||||||||||    
T  493099 aactattccattagattaattttcagaaattatacatta-gattattgaaagataatctcacccttaccttag 493028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 81; Significance: 7e-38; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 23 - 198
Target Start/End: Original strand, 134981 - 135155
Alignment:
Q  23 tcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagg 122  Q
    ||||||| ||||||||| ||||||| ||| |||||  | || |||||||||||||||||| ||||| |   ||||||||||||||  |||||||||||||    
T  134981 tcgcttaggcgaacgggtaaaatcgcatt-ctgggcagtttacttgaatgctcgcttaagcgacggatgcttcgcttaagcgaccaatcatctgggcagg 135079  T
Q  123 gtaaaaacctacgattt-cagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttc 198  Q
    |||||| | |||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  135080 gtaaaagc-tacgattttcaaacttctcctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttc 135155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 72 - 250
Target Start/End: Original strand, 18210 - 18386
Alignment:
Q  72 gctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttc 171  Q
    ||||||||||| || |||  | |||||||||||| | |||||||||||||| | ||||| |||||||||||||||||| |||||| |||||||||||||     
T  18210 gctcgcttaagcgatgggatgttcgcttaagcgatcactcatctgggcaggatgaaaacttacgatttcagacttctcttcactctaaaaacccaatttt 18309  T
Q  172 aatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaaa 250  Q
    ||||||||||||| |||||| |||||| | || |||||||||||||||||| |||| ||| || | |||||||||||||    
T  18310 aatcccctgatca-ccaaaacgttttccagca-atgtttacaggtcctatacacaactaggcaccgaaaggaacacaaa 18386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 78; Significance: 5e-36; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 72 - 236
Target Start/End: Original strand, 8949 - 9112
Alignment:
Q  72 gctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaacccaattt 170  Q
    ||||||||||| || |||  | |||||||||||||| |||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||    
T  8949 gctcgcttaagcgatgggatgttcgcttaagcgaccactcatctgggcagggtaaaagc-tacgattttcagacttctcctcactccaaaaacccaattt 9047  T
Q  171 caatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatc 236  Q
     |||||||||||||||||||| ||||||  | | ||||||||| |||||||| ||||  |||||||    
T  9048 taatcccctgatcacccaaaacgttttc-cagaaatgtttacaagtcctatacacaaccagacatc 9112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 546
Target Start/End: Original strand, 9336 - 9391
Alignment:
Q  491 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 546  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  9336 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 9391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 77; Significance: 2e-35; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 51 - 253
Target Start/End: Complemental strand, 129145 - 128943
Alignment:
Q  51 ttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctac-gatttcagacttctc 149  Q
    |||||||| |||| |||||||||||||||||| ||||||| | ||||||||||||    ||||||| |||| | |||||| ||| | ||||| ||| |||    
T  129145 ttctgggttgcttacttgaatgctcgcttaagcgacgggtcgttcgcttaagcgattattcatctgagcagtgcaaaaacttacaggtttcaaact-ctc 129047  T
Q  150 -ctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacaca 248  Q
     |||| ||||||| |||||||| |||||||||||||||||||| |||||| ||||||||||||||||| | |||||||| ||| |||||||||||||| |    
T  129046 tctcattccaaaa-cccaattttaatcccctgatcacccaaaacgttttccaacagatgtttacaggttcaatatacaactaggcatctaaaggaacata 128948  T
Q  249 aaaca 253  Q
    |||||    
T  128947 aaaca 128943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 94 - 251
Target Start/End: Original strand, 116508 - 116665
Alignment:
Q  94 tcgcttaagcgaccgctcatctgggcagggtaaaaacctacga-tttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaat 192  Q
    ||||||||||||||  |||||||| | | | |||||||||||  ||||||||   | |||||||||||| |||||||| |||||||||||||||||||||    
T  116508 tcgcttaagcgaccattcatctggactgtgcaaaaacctacgggtttcagaccctttctcactccaaaa-cccaattttaatcccctgatcacccaaaat 116606  T
Q  193 gttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaaaa 251  Q
    |||||| ||||||||||||||||||| ||| |||| ||| |||||||||||||||||||    
T  116607 gttttccaacagatgtttacaggtccaatacacaactaggcatctaaaggaacacaaaa 116665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 489 - 545
Target Start/End: Original strand, 116895 - 116951
Alignment:
Q  489 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 545  Q
    ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||    
T  116895 tcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 116951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 511 - 544
Target Start/End: Original strand, 60441 - 60474
Alignment:
Q  511 tatgattattgagagatagtctcacccttacctt 544  Q
    ||||||||||||||| ||||||||||||||||||    
T  60441 tatgattattgagagttagtctcacccttacctt 60474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 75; Significance: 3e-34; HSPs: 3)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 137 - 227
Target Start/End: Complemental strand, 2133 - 2043
Alignment:
Q  137 tttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaa 227  Q
    |||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  2133 tttcagacttcttctcactccaaaaaccccattttaatcccctgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaa 2043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 349 - 551
Target Start/End: Complemental strand, 1920 - 1727
Alignment:
Q  349 cagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaa 448  Q
    |||||||| ||  ||||||| ||||||||| ||||||| |||   |||  | |||||| ||| |||| ||||||   |||||||| ||||||||||||||    
T  1920 cagcaacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatccttactcattcca--tcagaatcatcatcaaaccctaa 1823  T
Q  449 ccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagtt 548  Q
    |  |||   ||||   ||||| ||||||||| | | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1822 ctttca---tatt---attttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttagtt 1730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 349 - 551
Target Start/End: Complemental strand, 5943 - 5750
Alignment:
Q  349 cagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaa 448  Q
    |||||||| ||  ||||||| ||||||||| ||||||| |||   |||  | |||||| ||| |||| ||||||   |||||||| ||||||||||||||    
T  5943 cagcaacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatccttactcattcca--tcagaatcatcatcaaaccctaa 5846  T
Q  449 ccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagtt 548  Q
    |  |||   ||||   ||||| ||||||||| | | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5845 ctttca---tatt---attttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttagtt 5753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 92 - 273
Target Start/End: Complemental strand, 18876 - 18697
Alignment:
Q  92 gctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaa 191  Q
    ||||||||||||||||  |||||||||||| | |||||| |||| ||||| ||   | |||| ||||||| |||||||| ||||||||||||||||||||    
T  18876 gctcgcttaagcgaccattcatctgggcagtgcaaaaacttacggtttcaaaccctttctcattccaaaa-cccaattttaatcccctgatcacccaaaa 18778  T
Q  192 tgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaaaacagtcatccaccaacaacaatt 273  Q
     |||||| |||||||||||||| || | |||||||| ||| |||||||||||||| |||||| |||| || |||||||||||    
T  18777 cgttttccaacagatgtttacacgttcaatatacaactaggcatctaaaggaacataaaacattcat-catcaacaacaatt 18697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 16 - 198
Target Start/End: Complemental strand, 4192 - 4012
Alignment:
Q  16 tcactgctcgcttaagcgaacgggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatct 115  Q
    |||||| |||||||||||||| || ||||||||||| |||||  | || | |||||| ||||||||| ||||| |   ||||||||||||||  ||||||    
T  4192 tcactgttcgcttaagcgaacaggtaaaatcgtatt-ctgggcag-ttacatgaatgttcgcttaagcgacggctgcttcgcttaagcgaccaatcatct 4095  T
Q  116 gggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttc 198  Q
     ||||||||||||   |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  4094 aggcagggtaaaagt-tacgattttcagacttctcctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttc 4012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 72; Significance: 2e-32; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 51 - 253
Target Start/End: Original strand, 1636 - 1838
Alignment:
Q  51 ttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacga-tttcagacttctc 149  Q
    |||| ||| |||| |||||||||||||||||| ||||||  | ||||||||||||||  |||||||||||| | |||||| ||||  ||||| ||   |     
T  1636 ttctcggtcgcttacttgaatgctcgcttaagcgacgggacgttcgcttaagcgaccattcatctgggcagtgcaaaaacttacgggtttcaaacccttt 1735  T
Q  150 ctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaa 249  Q
    |||| ||||||| |||||||| |||||||||||||||||||| |||||| |  | |||||||||||| ||||||| ||| || |||||||||||||||||    
T  1736 ctcattccaaaa-cccaattttaatcccctgatcacccaaaacgttttccataaaatgtttacaggttctatatataataaggcatctaaaggaacacaa 1834  T
Q  250 aaca 253  Q
    ||||    
T  1835 aaca 1838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 92 - 216
Target Start/End: Original strand, 65684 - 65809
Alignment:
Q  92 gctcgcttaagcgaccgctcatctgggcagggtaaaaa-cctacga-tttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaa 189  Q
    ||||||||||||||||| |||||||||||| | ||||| ||||||  ||||| ||   | | |||||||||| |||||||| |||||| |||||||||||    
T  65684 gctcgcttaagcgaccgttcatctgggcagtgcaaaaaacctacgggtttcaaaccctttcccactccaaaa-cccaattttaatcccttgatcacccaa 65782  T
Q  190 aatgttttctaacagatgtttacaggt 216  Q
    || |||||| |||| ||||||||||||    
T  65783 aacgttttccaacaaatgtttacaggt 65809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2054 (Bit Score: 70; Significance: 3e-31; HSPs: 2)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 94 - 198
Target Start/End: Original strand, 321 - 425
Alignment:
Q  94 tcgcttaagcgaccgctcatctgggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaat 192  Q
    |||||||||||||| ||||||||||||||||||||   |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  321 tcgcttaagcgaccactcatctgggcagggtaaaagt-tacgattttcagacttctcctcactccaaaaacccaattttaatcccctgatcacccaaaac 419  T
Q  193 gttttc 198  Q
    ||||||    
T  420 gttttc 425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2054; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 493 - 551
Target Start/End: Original strand, 717 - 775
Alignment:
Q  493 ttttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttg 551  Q
    ||||||| ||||||| |||| ||| ||||| ||||| || |||||||||||||||||||    
T  717 ttttcagaaattatatattaagatcattgaaagataatcccacccttaccttagttttg 775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 72 - 246
Target Start/End: Complemental strand, 16525 - 16355
Alignment:
Q  72 gctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgattt-cagacttctcctcactccaaaaacccaattt 170  Q
    ||||||||||| ||||||||| || ||||||||||| ||||||||||||||||||||   |||||||| ||||||||||   ||||||||||||||||||    
T  16525 gctcgcttaagcgacgggtagttcacttaagcgaccactcatctgggcagggtaaaagt-tacgattttcagacttctc---actccaaaaacccaattt 16430  T
Q  171 caatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaaca 246  Q
     |||||||||||||||||||| ||||||    | ||||||||| |||||||||||||  ||||||| |||| ||||    
T  16429 taatcccctgatcacccaaaacgttttc-ctgaaatgtttacaagtcctatatacaaccagacatcaaaagaaaca 16355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 52 - 273
Target Start/End: Original strand, 51814 - 52035
Alignment:
Q  52 tctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacga-tttcagacttctcc 150  Q
    ||||||| |||| |||||||||||||||||| ||||||| | ||||||||||||||  |||||||||||| | |||||| ||||  |||||  |   | |    
T  51814 tctgggttgcttccttgaatgctcgcttaagcgacgggtcgttcgcttaagcgaccattcatctgggcagtgcaaaaacttacgggtttcaacccctttc 51913  T
Q  151 tcactccaaaaacccaatttcaatcccc-tgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaa 249  Q
    ||| || ||||||||||||| ||||||| ||||||||||||| |||||| ||||||||||||||||| |  || |||| ||| ||||| |||||||| ||    
T  51914 tcattc-aaaaacccaattttaatccccctgatcacccaaaacgttttccaacagatgtttacaggttcagtacacaactaggcatcttaaggaacataa 52012  T
Q  250 aacagtcatccaccaacaacaatt 273  Q
    ||||| ||| || |||||||||||    
T  52013 aacaggcat-caacaacaacaatt 52035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 61; Significance: 6e-26; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 54 - 253
Target Start/End: Original strand, 121473 - 121672
Alignment:
Q  54 tgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaac-ctacgatttcagacttctcctc 152  Q
    ||||| ||||||||||||||||||||||| ||||||    ||||||||||||||  |||||||||||| | |||||| ||  | ||||| ||   |  ||    
T  121473 tgggttgcttgcttgaatgctcgcttaagcgacgggacattcgcttaagcgaccattcatctgggcagtgcaaaaactctcgggtttcaaaccctttttc 121572  T
Q  153 actccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaaaac 252  Q
    | ||||||| |||||||| |||||||||||||||||||| || ||| || ||||||||| |||| |  |||||||| || ||||||||||||||||||||    
T  121573 attccaaaa-cccaattttaatcccctgatcacccaaaacgtattccaaaagatgtttaaaggttcattatacaataaggcatctaaaggaacacaaaac 121671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 54 - 251
Target Start/End: Original strand, 132350 - 132547
Alignment:
Q  54 tgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaac-ctacgatttcagacttctcctc 152  Q
    ||||| ||||||||||||||||||||||| ||||||    ||||||||||||||  |||||||||||| | |||||| ||  | ||||| ||   |  ||    
T  132350 tgggttgcttgcttgaatgctcgcttaagcgacgggacattcgcttaagcgaccattcatctgggcagtgcaaaaactctcgggtttcaaaccctttttc 132449  T
Q  153 actccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaaaa 251  Q
    | ||||||| |||||||| |||||||||||||||||||| || ||| |  ||||||||| |||| |  |||||||| || |||||||||||||||||||    
T  132450 attccaaaa-cccaattttaatcccctgatcacccaaaacgtattccagaagatgtttataggttcattatacaataaggcatctaaaggaacacaaaa 132547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 60; Significance: 3e-25; HSPs: 2)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 51 - 253
Target Start/End: Complemental strand, 3114 - 2912
Alignment:
Q  51 ttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaac-ctacgatttcagacttctc 149  Q
    |||||||| |||||||||||||| |||| ||| || |||| | ||||||||||||||  |||||||||||| | |||||| ||  | ||||| ||   |     
T  3114 ttctgggttgcttgcttgaatgcgcgctcaagcgatgggtcgttcgcttaagcgaccattcatctgggcagtgcaaaaactctcgggtttcaaacccttt 3015  T
Q  150 ctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaa 249  Q
    |||||||||||| || ||||| |||||||||||||||||||| || ||| || |||||||||||||| |  ||| |||  || |||||||||||||||||    
T  3014 ctcactccaaaatcc-aattttaatcccctgatcacccaaaacgtattccaaaagatgtttacaggttcattatgcaacaaggcatctaaaggaacacaa 2916  T
Q  250 aaca 253  Q
    ||||    
T  2915 aaca 2912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 489 - 545
Target Start/End: Complemental strand, 2684 - 2628
Alignment:
Q  489 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 545  Q
    ||||||||||| | ||||| ||||| || |||||||| ||| |||||||||||||||    
T  2684 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 2628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 59; Significance: 1e-24; HSPs: 2)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 92 - 273
Target Start/End: Original strand, 996 - 1176
Alignment:
Q  92 gctcgcttaagcgaccgctcatctgggcagggtaaaaacctacga-tttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaa 190  Q
    ||||||||||||| ||  |||||||||||| | |||||||||||  ||||| ||   | |||||||||||| || ||||| |||||||||||||||||||    
T  996 gctcgcttaagcggccattcatctgggcagtgcaaaaacctacgggtttcaaaccctttctcactccaaaa-cctaattttaatcccctgatcacccaaa 1094  T
Q  191 atgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaacacaaaacagtcatccaccaacaacaatt 273  Q
    | |||||| || ||||||||| |||| | ||| | || ||| |||||||||||||||||||||| ||| || |||||||||||    
T  1095 acgttttccaatagatgtttataggttcaatacataactaggcatctaaaggaacacaaaacaggcat-caacaacaacaatt 1176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 489 - 545
Target Start/End: Original strand, 1385 - 1441
Alignment:
Q  489 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 545  Q
    ||||||||||  ||||||| || ||||| ||||| ||||||||||||||||||||||    
T  1385 tcaattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 1441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 73 - 198
Target Start/End: Complemental strand, 14357 - 14232
Alignment:
Q  73 ctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttca 172  Q
    |||||||||| || |||  | ||||||||||||||  ||||| |  |||||||||||| ||||||||||||||||||  ||||||||||||||||||| |    
T  14357 ctcgcttaagcgatgggatgttcgcttaagcgaccattcatcagtacagggtaaaaacttacgatttcagacttctctccactccaaaaacccaatttta 14258  T
Q  173 atcccctgatcacccaaaatgttttc 198  Q
    |||||| |||| ||||||| ||||||    
T  14257 atcccccgatcgcccaaaacgttttc 14232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 72 - 246
Target Start/End: Original strand, 591 - 762
Alignment:
Q  72 gctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaaaaacccaatttc 171  Q
    ||||||||||| || |||  | |||||||||||||| |||||||||||||||||      |||||||||||||| ||||||||||||||||||||||||     
T  591 gctcgcttaagcgatgggaggttcgcttaagcgaccactcatctgggcagggtacttt--tacgatttcagactcctcctcactccaaaaacccaatttt 688  T
Q  172 aatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaaca 246  Q
    |||||||   |||||||||| | |||| || | ||||||||| |||||||||  ||| ||||||| | |||||||    
T  689 aatccccaattcacccaaaacg-tttccaagaaatgtttacaagtcctatatgaaatcagacatcaacaggaaca 762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 472 - 551
Target Start/End: Complemental strand, 45347 - 45269
Alignment:
Q  472 aaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttg 551  Q
    |||||||| | | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  45347 aaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttagatttg 45269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 159 - 244
Target Start/End: Complemental strand, 3671 - 3586
Alignment:
Q  159 aaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaa 244  Q
    |||||||||||| |||||||||||| ||||||| |||||| | ||||||||||||||||||||| |||| ||| ||||||||||||    
T  3671 aaaacccaattttaatcccctgatcgcccaaaacgttttccagcagatgtttacaggtcctatacacaactaggcatctaaaggaa 3586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 343 - 458
Target Start/End: Complemental strand, 3490 - 3375
Alignment:
Q  343 tgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgat-cattacccattcctcttcagaatcgtcatcaa 441  Q
    ||||||||||||||  | |||||||| ||||||||||||||| | |||| || |  ||||||||||| ||||||||||||| || ||||||| |||||||    
T  3490 tgatcacagcaacagtatagattaagatttcattctgaacatcacattacaacaaaattaacatgattcattacccattcccct-cagaatcatcatcaa 3392  T
Q  442 accctaaccctcaattt 458  Q
    |||||||||||||||||    
T  3391 accctaaccctcaattt 3375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 51 - 253
Target Start/End: Original strand, 6537 - 6742
Alignment:
Q  51 ttctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctggg---cagggtaaaaac-ctacgatttcagactt 146  Q
    |||||||| |||| ||||||||||| || ||| ||||||| | ||||||||||||||  |||||||||   ||| |||||||| ||  | ||||| ||      
T  6537 ttctgggttgctttcttgaatgctcactcaagcgacgggtcgttcgcttaagcgaccattcatctggggggcagtgtaaaaactctcgggtttcaaaccc 6636  T
Q  147 ctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtttacaggtcctatatacaattagacatctaaaggaaca 246  Q
     | |||| ||| ||||| |||||| |||||||||||||||| ||| || ||| || ||||||||||| || | ||||||||| || ||||||||||||||    
T  6637 tttctca-tcccaaaactcaattttaatcccctgatcacccgaaacgtattccaaaagatgtttacaagttcaatatacaataaggcatctaaaggaaca 6735  T
Q  247 caaaaca 253  Q
    |||||||    
T  6736 caaaaca 6742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 94 - 191
Target Start/End: Original strand, 12551 - 12650
Alignment:
Q  94 tcgcttaagcgaccgctcatctgggcagggtaaaaacctacga-tttcagacttctcctcactcc-aaaaacccaa-tttcaatcccctgatcacccaaa 190  Q
    |||||||||||||| |||||||||||||||| || | |||||| ||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||    
T  12551 tcgcttaagcgaccactcatctgggcagggt-aacagctacgattttcagacttctcctcactccaaaaaacccaatttttaatcccctgatcacccaaa 12649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1461 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold1461
Description:

Target: scaffold1461; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 52 - 126
Target Start/End: Complemental strand, 1775 - 1701
Alignment:
Q  52 tctgggtggcttgcttgaatgctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaa 126  Q
    ||||||| ||| |||||||| |||||||||| |||||||||||||||||||||||| |||||||||| |||||||    
T  1775 tctgggttgctagcttgaatactcgcttaagcgacgggtagctcgcttaagcgaccactcatctgggtagggtaa 1701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 490 - 546
Target Start/End: Original strand, 17643 - 17699
Alignment:
Q  490 caattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 546  Q
    |||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||    
T  17643 caattttcagaaattatacattatggttattgagagatagtctcacccttaccttag 17699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 490 - 546
Target Start/End: Original strand, 135473 - 135529
Alignment:
Q  490 caattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 546  Q
    |||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||    
T  135473 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttag 135529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 489 - 545
Target Start/End: Original strand, 13631 - 13687
Alignment:
Q  489 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 545  Q
    ||||||||||| ||||||  |||| ||||||||||||||||||||||||||||||||    
T  13631 tcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 13687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 3735 - 3665
Alignment:
Q  72 gctcgcttaagggacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacgatttcag 142  Q
    ||||||||||| || |||  | |||||||||||||| |||||||||||| ||||||||| |||||||||||    
T  3735 gctcgcttaagcgaggggatgttcgcttaagcgaccactcatctgggcaaggtaaaaacttacgatttcag 3665  T

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Target: scaffold0096 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 489 - 555
Target Start/End: Complemental strand, 39563 - 39497
Alignment:
Q  489 tcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgatga 555  Q
    ||||||||| | ||||||| |||||||| |||||||| ||| |||||||||||||| |||| |||||    
T  39563 tcaattttctgaaattatatattatgatcattgagagttagcctcacccttacctttgtttagatga 39497  T

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Target: scaffold0815 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 494 - 551
Target Start/End: Original strand, 1453 - 1510
Alignment:
Q  494 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttg 551  Q
    |||||| ||||||| |||| ||| |||||||| ||||||||||||||||||| |||||    
T  1453 tttcagaaattatacattaagatcattgagagttagtctcacccttaccttaattttg 1510  T

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Target: scaffold0127 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 546
Target Start/End: Original strand, 10239 - 10294
Alignment:
Q  491 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 546  Q
    ||||||||| ||||| | |||||||||||||  ||||| |||||||||||||||||    
T  10239 aattttcagaaattacatattatgattattggaagataatctcacccttaccttag 10294  T

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Target: scaffold1318 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 491 - 545
Target Start/End: Complemental strand, 1967 - 1913
Alignment:
Q  491 aattttcaggaattatagattatgattattgagagatagtctcacccttacctta 545  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || |||||||||||||    
T  1967 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 1913  T

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Target: scaffold0790 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 517 - 551
Target Start/End: Original strand, 5480 - 5514
Alignment:
Q  517 tattgagagatagtctcacccttaccttagttttg 551  Q
    |||||| ||||||||||||||||||||||||||||    
T  5480 tattgaaagatagtctcacccttaccttagttttg 5514  T

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Target: scaffold0600 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0600
Description:

Target: scaffold0600; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 203 - 253
Target Start/End: Original strand, 454 - 504
Alignment:
Q  203 agatgtttacaggtcctatatacaattagacatctaaaggaacacaaaaca 253  Q
    |||||||||||||| |  ||||||| ||| |||||||||||||||||||||    
T  454 agatgtttacaggttcattatacaactaggcatctaaaggaacacaaaaca 504  T

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Target: scaffold0429 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 511 - 555
Target Start/End: Complemental strand, 2034 - 1990
Alignment:
Q  511 tatgattattgagagatagtctcacccttaccttagttttgatga 555  Q
    ||||||||||||||| ||| ||||||||||||||| ||| |||||    
T  2034 tatgattattgagagttagcctcacccttaccttaatttagatga 1990  T

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